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Compuational Tools and DBs by the Members

Tools and databases for computational biology developed in Ochanomizu University.

kemba-svm.exe
Support vector machine with Partial Distance Kernel which is robust to noise

KYG
Predict RNA interfaces out of 3D structures of RNA-binding proteins

Takakia
Predict RNA editing sites only from cDNA sequences of Takakia lepidozioides chloroploasts

RESOSP
DB for locations of RNA editing sites on protein 3D structures

OCBI
Ochadai Computational Biology Initiative: Effort to gather and develop tools for structural bioinformatics

SapD (under construction)
Gene Hunting Database developing with members of Ochadai Academic Production

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