| Program name | Description |
|---|
| antigenic |
Finds antigenic sites in proteins
|
| digest |
Reports on protein proteolytic enzyme or reagent cleavage sites
|
| epestfind |
Finds PEST motifs as potential proteolytic cleavage sites
|
| fuzzpro |
Search for patterns in protein sequences
|
| fuzztran |
Search for patterns in protein sequences (translated)
|
| helixturnhelix |
Identify nucleic acid-binding motifs in protein sequences
|
| oddcomp |
Identify proteins with specified sequence word composition
|
| patmatdb |
Searches protein sequences with a sequence motif
|
| patmatmotifs |
Scan a protein sequence with motifs from the PROSITE database
|
| pepcoil |
Predicts coiled coil regions in protein sequences
|
| preg |
Regular expression search of protein sequence(s)
|
| pscan |
Scans protein sequence(s) with fingerprints from the PRINTS database
|
| sigcleave |
Reports on signal cleavage sites in a protein sequence
|
| omeme |
Motif detection
|
| emast |
Motif detection
|
| ememe |
Motif detection
|