cutseq

Function

Description

This simple editing program allows you to cut out a region from your sequence by specifying the begin and end positions of the region to remove. It removes the sequence from the specified start to the end positions (inclusive) and writes the remaining sequence to the output file.

Usage

Command line arguments


Input file format

cutseq reads a single sequence USA.

Output file format

cutseq writes a single sequence file.

Data files

None.

Notes

Qualifiers that are in-built for sequence datatypes allow the input and output files to be specified in more detail, for example, the format for the output files.

References

None.

Warnings

You can delete a complete sequence and write out an empty sequence file.

Diagnostic Error Messages

None.

Exit status

It always exits with status 0

Known bugs

None.

Author(s)

History

Target users

Comments