aligncopypair
Function
Description
aligncopypair reads a set of aligned sequences and reports the
alignment one pair ar a time using any of the standard EMBOSS
alignment formats.
Usage
Command line arguments
Input file format
aligncopypair reads any normal sequence USAs.
Output file format
Data files
For protein sequences EBLOSUM62 is used for the substitution matrix.
For nucleotide sequence, EDNAFULL is used.
Notes
None.
References
None.
Warnings
None.
Diagnostic Error Messages
None.
Exit status
It always exits with status 0.
Known bugs
None.
Author(s)
History
Target users
Comments