ID AB007034_1 STANDARD; PRT; 507 AA. AC AB007034; DT Tue Jul 21 06:59:59 2009 DE Beta vulgaris subsp. vulgaris mitochondrial atpA gene for F1 ATPase OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Curr. Genet. 24 (1-2), 164-170 (1993) RL PUBMED 8358823 FT Full length CDS FT GENE : atpA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA32243.1 FT PROTEIN_NAME : F1 ATPase subunit alpha FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 181 - 1701 FT DIRECTIONS : positive FT EDITING : 393 P(cCa) -> L(cTa) FT EDITING : 431 P(cCg) -> L(cTg) FT EDITING : 472 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1521 NT; CD 1 atggaattct ctcccagagc tgcggaacta acgaatctat tagaaagtag CD 51 aattaccaac ttttacacga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacgtgttt atggattgaa cgagattcaa CD 151 gctggggaaa tggtggaatt tgccagcggt gtgaaaggaa tagccttaaa CD 201 tcttgagaat gagaatgtag ggattgttgt ctttggtagt gataccgcta CD 251 ttaaagaggg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gcgggaaagg ctatgctagg gcgtgtggtc gacgcgttgg gagtacctat CD 351 tgatggaaga ggggctctaa gcgatcacga gcgtcgacgt gtcgaagtga CD 401 aagcccccgg gattattgaa cgtaaatctg tgcacgagcc tatgcaaacc CD 451 gggttaaagg cggtagatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttataatc ggggaccgac aaacgggaaa aacagctatt gctatcgata CD 551 ccatattaaa ccaaaagcaa ctgaactcaa aggccacctc tgagagtgag CD 601 acattgtatt gtgtctatgt agcggttgga cagaaacgtt caactgtggc CD 651 acaattagtt caaattcttt cagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctcttcaatt tctggcccca CD 751 tattctgggt gtgctatggg agaatatttc cgcgataatg gaatgcacgc CD 801 attaataatc tatgatgatc ttagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggcgac CD 901 gttttctatt tacattcccg tctcttagaa agagccgcta aacgatcgga CD 951 ccagacaggc gcaggtagct tgaccgccct acccgtcatt gaaacacaag CD 1001 ctggagacgt atcggcctat attcccacca atgtgatctc cattactgat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtc ggcttatctg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtctgc ggtagtcCaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgcctttgc tcaatttggg tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct tacagaagta cCgaaacaac CD 1301 cacaatatgc accacttcca attgaaaaac aaattctagt catttacgca CD 1351 gctgtcaatg gattctgtga tcgaatgcca ctagataaaa tttctcaata CD 1401 tgagcgaacc attcCaaata gtgtaaaacc agaattatta caatccctta CD 1451 agggggggtt aactaacgaa aaaaagatgg aactagattc cttcttaaaa CD 1501 gaatgcgctt tgaattacta a FT EDITED CDNA CD 1 atggaattct ctcccagagc tgcggaacta acgaatctat tagaaagtag CD 51 aattaccaac ttttacacga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacgtgttt atggattgaa cgagattcaa CD 151 gctggggaaa tggtggaatt tgccagcggt gtgaaaggaa tagccttaaa CD 201 tcttgagaat gagaatgtag ggattgttgt ctttggtagt gataccgcta CD 251 ttaaagaggg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gcgggaaagg ctatgctagg gcgtgtggtc gacgcgttgg gagtacctat CD 351 tgatggaaga ggggctctaa gcgatcacga gcgtcgacgt gtcgaagtga CD 401 aagcccccgg gattattgaa cgtaaatctg tgcacgagcc tatgcaaacc CD 451 gggttaaagg cggtagatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttataatc ggggaccgac aaacgggaaa aacagctatt gctatcgata CD 551 ccatattaaa ccaaaagcaa ctgaactcaa aggccacctc tgagagtgag CD 601 acattgtatt gtgtctatgt agcggttgga cagaaacgtt caactgtggc CD 651 acaattagtt caaattcttt cagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctcttcaatt tctggcccca CD 751 tattctgggt gtgctatggg agaatatttc cgcgataatg gaatgcacgc CD 801 attaataatc tatgatgatc ttagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggcgac CD 901 gttttctatt tacattcccg tctcttagaa agagccgcta aacgatcgga CD 951 ccagacaggc gcaggtagct tgaccgccct acccgtcatt gaaacacaag CD 1001 ctggagacgt atcggcctat attcccacca atgtgatctc cattactgat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtc ggcttatctg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtctgc ggtagtcTaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgcctttgc tcaatttggg tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct tacagaagta cTgaaacaac CD 1301 cacaatatgc accacttcca attgaaaaac aaattctagt catttacgca CD 1351 gctgtcaatg gattctgtga tcgaatgcca ctagataaaa tttctcaata CD 1401 tgagcgaacc attcTaaata gtgtaaaacc agaattatta caatccctta CD 1451 agggggggtt aactaacgaa aaaaagatgg aactagattc cttcttaaaa CD 1501 gaatgcgctt tgaattacta a SQ SEQUENCE 507 AA; MEFSPRAAEL TNLLESRITN FYTNFQVDEI GRVVSVGDGI ARVYGLNEIQ AGEMVEFASG VKGIALNLEN ENVGIVVFGS DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DALGVPIDGR GALSDHERRR VEVKAPGIIE RKSVHEPMQT GLKAVDSLVP IGRGQRELII GDRQTGKTAI AIDTILNQKQ LNSKATSESE TLYCVYVAVG QKRSTVAQLV QILSEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSLKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV LKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDKISQYERT ILNSVKPELL QSLKGGLTNE KKMELDSFLK ECALNY* // ID AB008450_1 STANDARD; PRT; 149 AA. AC AB008450; DT Tue Jul 21 06:59:59 2009 DE Beta vulgaris mitochondrial rps7 gene for ribosomal protein S7, OS mitochondrion Beta vulgaris OC Beta vulgaris RN [1] RL Physiol. Plantarum 102, 325-327 (1998) FT Full length CDS FT GENE : rps7 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA28749.1 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1060 - 1506 FT DIRECTIONS : positive FT EDITING : 39 P(cCa) -> L(cTa) FT EDITING : 111 S(tCa) -> L(tTa) FT EDITING : 142 F(ttC) -> F(ttT) FT CODON_START : 1 CL CDNALEN 447 NT; CD 1 atggggggct tagatagtga gcaaaaacaa ttgatcaaga aattggtcaa CD 51 ctttcacatg aaagaaggta aaagaacgaa ggttcgtgct attgtttatc CD 101 aaacttttca tcgccCagct cgaactgaag gcgatgtaat caaacttatg CD 151 attgacgccg tagagaatat aaagcccata tgcaaagtag aaaaagtcag CD 201 agtagcaggt actatttatg atgtccccgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggatccttg aagcagcttt caaacgacgt CD 301 atatcctaca ggataagctt agagaaatgt tCatttgatg agatactgga CD 351 tgcttaccga aagaggggaa tttcgcgtaa gaaaagggag aatcttcatg CD 401 gactggcttc cgccaatcga agtttCgcgc atttcagatg gtggtaa FT EDITED CDNA CD 1 atggggggct tagatagtga gcaaaaacaa ttgatcaaga aattggtcaa CD 51 ctttcacatg aaagaaggta aaagaacgaa ggttcgtgct attgtttatc CD 101 aaacttttca tcgccTagct cgaactgaag gcgatgtaat caaacttatg CD 151 attgacgccg tagagaatat aaagcccata tgcaaagtag aaaaagtcag CD 201 agtagcaggt actatttatg atgtccccgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggatccttg aagcagcttt caaacgacgt CD 301 atatcctaca ggataagctt agagaaatgt tTatttgatg agatactgga CD 351 tgcttaccga aagaggggaa tttcgcgtaa gaaaagggag aatcttcatg CD 401 gactggcttc cgccaatcga agtttTgcgc atttcagatg gtggtaa SQ SEQUENCE 149 AA; MGGLDSEQKQ LIKKLVNFHM KEGKRTKVRA IVYQTFHRLA RTEGDVIKLM IDAVENIKPI CKVEKVRVAG TIYDVPGIVA RDRQQTLAIR WILEAAFKRR ISYRISLEKC LFDEILDAYR KRGISRKKRE NLHGLASANR SFAHFRWW* // ID AB013664_1 STANDARD; PRT; 195 AA. AC AB013664; DT Tue Jul 21 07:00:00 2009 DE Anthoceros punctatus chloroplast psaA gene for photosystem I P700 OS chloroplast Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT N-terminal not determined FT C-terminal not determined FT GENE : psaA FT NOTE : possibly edited FT LOCUS_TAG : FT PROTEIN_ID : BAA83440.1 FT PROTEIN_NAME : photosystem I P700 apoprotein A1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 583 FT DIRECTIONS : positive FT EDITING : 2 *(Taa) -> Q(Caa) FT EDITING : 7 *(Tag) -> Q(Cag) FT EDITING : 64 *(Taa) -> Q(Caa) FT EDITING : 123 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 583 NT; CD 1 ttgTaatacg actcactaTa gggcgaattg ggcccgacgt cgcatgctcc CD 51 cggccgccat ggcgccggga ttaagggtcc tagtactacc acttggattt CD 101 ggaatctaca tgctgatgct catgatttcg atagccatac taatgattta CD 151 gaagaagttt ctcgcaaagt ttttagtgct cactttggtT aattagccat CD 201 catttttatt tggttgagtg gaatgtattt ccatggggcc agattcccca CD 251 attatgaagc atggttaggt gatcctactc acattaagcc tagtgcccaa CD 301 gttgtttggc caatagtagg tcaagaaatt ttgaatggag acgtaggtgg CD 351 tggttttcaa ggaataTaaa taacctctgg ttttttccaa atttggcgag CD 401 catctggaat aactagtgaa ttacaacttt attctactgc aattggtgga CD 451 ttgatcttcg cggcattaat gctttttgct ggttggtttc actatcataa CD 501 agctgctccc aaattagttt ggtttcaaga tgtggaatct atgttgaatc CD 551 accatctagc tgggttattg ggactaggtt ctt FT EDITED CDNA CD 1 ttgCaatacg actcactaCa gggcgaattg ggcccgacgt cgcatgctcc CD 51 cggccgccat ggcgccggga ttaagggtcc tagtactacc acttggattt CD 101 ggaatctaca tgctgatgct catgatttcg atagccatac taatgattta CD 151 gaagaagttt ctcgcaaagt ttttagtgct cactttggtC aattagccat CD 201 catttttatt tggttgagtg gaatgtattt ccatggggcc agattcccca CD 251 attatgaagc atggttaggt gatcctactc acattaagcc tagtgcccaa CD 301 gttgtttggc caatagtagg tcaagaaatt ttgaatggag acgtaggtgg CD 351 tggttttcaa ggaataCaaa taacctctgg ttttttccaa atttggcgag CD 401 catctggaat aactagtgaa ttacaacttt attctactgc aattggtgga CD 451 ttgatcttcg cggcattaat gctttttgct ggttggtttc actatcataa CD 501 agctgctccc aaattagttt ggtttcaaga tgtggaatct atgttgaatc CD 551 accatctagc tgggttattg ggactaggtt ctt SQ SEQUENCE 195 AA; LQYDSLQGEL GPTSHAPGRH GAGIKGPSTT TWIWNLHADA HDFDSHTNDL EEVSRKVFSA HFGQLAIIFI WLSGMYFHGA RFPNYEAWLG DPTHIKPSAQ VVWPIVGQEI LNGDVGGGFQ GIQITSGFFQ IWRASGITSE LQLYSTAIGG LIFAALMLFA GWFHYHKAAP KLVWFQDVES MLNHHLAGLL GLGSX // ID AB013665_1 STANDARD; PRT; 282 AA. AC AB013665; DT Tue Jul 21 07:00:00 2009 DE Anthoceros punctatus chloroplast psaB gene for photosystem I P700 OS chloroplast Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT C-terminal not determined FT GENE : psaB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA83441.1 FT PROTEIN_NAME : photosystem I P700 apoprotein A2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 845 FT DIRECTIONS : positive FT EDITING : 44 *(Taa) -> Q(Caa) FT EDITING : 106 *(Tga) -> R(Cga) FT EDITING : 122 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 845 NT; CD 1 atggcatcaa gattcccaaa attcagccag ggtctatctc aagacccgac CD 51 tacccgtcgt atttggttcg gtattgctac cgcacatgac ttcgagagtc CD 101 atgataatat tactgaagag cgtctctatT aaaagatatt tgcttctcat CD 151 ttcggtcaat tagccatcat ttttttatgg acctctggta attcatttca CD 201 tgtcgcttgg cagggtaatt tcgaggcgtg ggtacaagac cctttacatg CD 251 taagaccaat cgctcatgct atttgggatc cccattttgg tgaaccagct CD 301 gtagaagcct ttactTgagg aggagcttta ggtcccgtta atattgctta CD 351 ttctggggtc tatTaatggt ggtatataat tggcttgcgc accattcaag CD 401 atctttatat tggagctctt tttctgttat tccttgctgc tgttttttta CD 451 atagcgggtt ggttacacct acaacctaaa tggaaaccaa gtgtttcatg CD 501 gtttaagaat gctgagtctc gtcccaatca ccacttgtca ggactttttg CD 551 gagtaagttc tttagcctgg gcaggacatt taatacatgt agctatttct CD 601 gaatcgaggg gtgagcatgt aagatgggat aatctattaa ccgcattacc CD 651 acatcctcaa gggttaaaac ctttttttga aggtcaatgg ggtatttatg CD 701 ctgaaaatgc tgattcaagt agtcatttgt tcagtacttc tgaaggagca CD 751 ggtacagcta ttccaacatt cattggcgga ttccatccac aaacccaaag CD 801 tttatggtta actgatattg ctcatcatta tttagctatt gcagt FT EDITED CDNA CD 1 atggcatcaa gattcccaaa attcagccag ggtctatctc aagacccgac CD 51 tacccgtcgt atttggttcg gtattgctac cgcacatgac ttcgagagtc CD 101 atgataatat tactgaagag cgtctctatC aaaagatatt tgcttctcat CD 151 ttcggtcaat tagccatcat ttttttatgg acctctggta attcatttca CD 201 tgtcgcttgg cagggtaatt tcgaggcgtg ggtacaagac cctttacatg CD 251 taagaccaat cgctcatgct atttgggatc cccattttgg tgaaccagct CD 301 gtagaagcct ttactCgagg aggagcttta ggtcccgtta atattgctta CD 351 ttctggggtc tatCaatggt ggtatataat tggcttgcgc accattcaag CD 401 atctttatat tggagctctt tttctgttat tccttgctgc tgttttttta CD 451 atagcgggtt ggttacacct acaacctaaa tggaaaccaa gtgtttcatg CD 501 gtttaagaat gctgagtctc gtcccaatca ccacttgtca ggactttttg CD 551 gagtaagttc tttagcctgg gcaggacatt taatacatgt agctatttct CD 601 gaatcgaggg gtgagcatgt aagatgggat aatctattaa ccgcattacc CD 651 acatcctcaa gggttaaaac ctttttttga aggtcaatgg ggtatttatg CD 701 ctgaaaatgc tgattcaagt agtcatttgt tcagtacttc tgaaggagca CD 751 ggtacagcta ttccaacatt cattggcgga ttccatccac aaacccaaag CD 801 tttatggtta actgatattg ctcatcatta tttagctatt gcagt SQ SEQUENCE 282 AA; MASRFPKFSQ GLSQDPTTRR IWFGIATAHD FESHDNITEE RLYQKIFASH FGQLAIIFLW TSGNSFHVAW QGNFEAWVQD PLHVRPIAHA IWDPHFGEPA VEAFTRGGAL GPVNIAYSGV YQWWYIIGLR TIQDLYIGAL FLLFLAAVFL IAGWLHLQPK WKPSVSWFKN AESRPNHHLS GLFGVSSLAW AGHLIHVAIS ESRGEHVRWD NLLTALPHPQ GLKPFFEGQW GIYAENADSS SHLFSTSEGA GTAIPTFIGG FHPQTQSLWL TDIAHHYLAI AV // ID AB013666_1 STANDARD; PRT; 156 AA. AC AB013666; DT Tue Jul 21 07:00:00 2009 DE Anthoceros punctatus chloroplast psaB gene for photosystem I P700 OS chloroplast Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT N-terminal not determined FT C-terminal not determined FT GENE : psaB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA83442.1 FT PROTEIN_NAME : photosystem I P700 apoprotein A2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 468 FT DIRECTIONS : positive FT EDITING : 21 *(Taa) -> Q(Caa) FT EDITING : 30 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 468 NT; CD 1 ccatactttg ggactctatg tccataatga tgttatgctt gcctttggta CD 51 ctccagaaaa aTaaatctta atcgagcctg tatttgctTa atggatacaa CD 101 tctgcccatg gtaagactct atatgggttt gatctacttc tatcttcagc CD 151 ggataggcca gctttcaatg ctggtcaaag catatggtta cctggttggt CD 201 tagatgctac caataataat agtaattcac tattcttaac tattggtcct CD 251 ggtgactttt tggttcacca tgctattgct ttgggcttgc atacgacaac CD 301 actaatttta gtcaaaggtg ctttggatgc acggggattc aagctaatgc CD 351 ccgataaaaa agaatttggt tatagttttc cttgtgatgg tccaggaaga CD 401 ggtggtactt gtgatatttc agcctgggat gcttttnatt tagctgtttc CD 451 ttggatntta aacacgat FT EDITED CDNA CD 1 ccatactttg ggactctatg tccataatga tgttatgctt gcctttggta CD 51 ctccagaaaa aCaaatctta atcgagcctg tatttgctCa atggatacaa CD 101 tctgcccatg gtaagactct atatgggttt gatctacttc tatcttcagc CD 151 ggataggcca gctttcaatg ctggtcaaag catatggtta cctggttggt CD 201 tagatgctac caataataat agtaattcac tattcttaac tattggtcct CD 251 ggtgactttt tggttcacca tgctattgct ttgggcttgc atacgacaac CD 301 actaatttta gtcaaaggtg ctttggatgc acggggattc aagctaatgc CD 351 ccgataaaaa agaatttggt tatagttttc cttgtgatgg tccaggaaga CD 401 ggtggtactt gtgatatttc agcctgggat gcttttnatt tagctgtttc CD 451 ttggatntta aacacgat SQ SEQUENCE 156 AA; HTLGLYVHND VMLAFGTPEK QILIEPVFAQ WIQSAHGKTL YGFDLLLSSA DRPAFNAGQS IWLPGWLDAT NNNSNSLFLT IGPGDFLVHH AIALGLHTTT LILVKGALDA RGFKLMPDKK EFGYSFPCDG PGRGGTCDIS AWDAFXLAVS WXLNTX // ID AB013667_1 STANDARD; PRT; 315 AA. AC AB013667; DT Tue Jul 21 07:00:00 2009 DE Anthoceros punctatus chloroplast psbD gene for photosystem II OS chloroplast Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT N-terminal not determined FT C-terminal not determined FT GENE : psbD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA83443.1 FT PROTEIN_NAME : photosystem II protein D2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 945 FT DIRECTIONS : positive FT EDITING : 106 *(Taa) -> Q(Caa) FT EDITING : 141 *(Tag) -> Q(Cag) FT EDITING : 157 *(Tga) -> R(Cga) FT EDITING : 309 *(Taa) -> Q(Caa) FT CODON_START : 3 CL CDNALEN 945 NT; CD 1 agagagatcg cttcgtattt gtaggttggt ccggcttatt gctgtttcct CD 51 tgtgcttatt ttgctttagg tggatggttt acaggtacga ctttcgtaag CD 101 ttcacggtat actcatggat tagctagttc ttacttagag ggctgtaatt CD 151 tcttgaccgc cgcggtttct acctctgtta atagtttagc acatttttta CD 201 ttgcttctat ggggtcctga agcacaagga gatttcactt gttggtgcca CD 251 actaggcggt ctatggacct ttgtggctct ccatggtgct tttggtttaa CD 301 taggcttcat gttacgcTaa ttcgaactag ctagatctgt gcaattacgt CD 351 ctttataatg ccattgcatt ttctggtcca attgcagttt ttgtttccgt CD 401 attcttgatc tatccattgg gtTagtctgg ttggtttttc gcactcagtt CD 451 tcggtgtagc agctatctct Tgattcattc ttttctttta aggttttcat CD 501 aactggactt taaacttgtt tcatatgatg ggagttgctg gagttttagg CD 551 tgttgcttta ttatgtgtta tttatggggc tacagtggag aatactttgt CD 601 ttgaggatgg tgatggtgca aatacattcc gtgctttcaa cccaactcaa CD 651 tctgaagaaa cttattctat ggtaactgct aatagatttt ggtctcagat CD 701 cttcggtgtt gctttcccta acaagcgttg gttacacttt ttcatgttat CD 751 tcgtaccagt aactggttta tggatgagtg ctattggagt tgttggttta CD 801 gccttaaact taagagcata tgattttgta tctcaagaga ttcgtgcagc CD 851 ggaggatcct gaatctgaaa ctttctacac taaaaatatt cttctgaatg CD 901 aaggtattcg tgcttggatg gcggctTaag atcagcctca tgaaa FT EDITED CDNA CD 1 agagagatcg cttcgtattt gtaggttggt ccggcttatt gctgtttcct CD 51 tgtgcttatt ttgctttagg tggatggttt acaggtacga ctttcgtaag CD 101 ttcacggtat actcatggat tagctagttc ttacttagag ggctgtaatt CD 151 tcttgaccgc cgcggtttct acctctgtta atagtttagc acatttttta CD 201 ttgcttctat ggggtcctga agcacaagga gatttcactt gttggtgcca CD 251 actaggcggt ctatggacct ttgtggctct ccatggtgct tttggtttaa CD 301 taggcttcat gttacgcCaa ttcgaactag ctagatctgt gcaattacgt CD 351 ctttataatg ccattgcatt ttctggtcca attgcagttt ttgtttccgt CD 401 attcttgatc tatccattgg gtCagtctgg ttggtttttc gcactcagtt CD 451 tcggtgtagc agctatctct Cgattcattc ttttctttta aggttttcat CD 501 aactggactt taaacttgtt tcatatgatg ggagttgctg gagttttagg CD 551 tgttgcttta ttatgtgtta tttatggggc tacagtggag aatactttgt CD 601 ttgaggatgg tgatggtgca aatacattcc gtgctttcaa cccaactcaa CD 651 tctgaagaaa cttattctat ggtaactgct aatagatttt ggtctcagat CD 701 cttcggtgtt gctttcccta acaagcgttg gttacacttt ttcatgttat CD 751 tcgtaccagt aactggttta tggatgagtg ctattggagt tgttggttta CD 801 gccttaaact taagagcata tgattttgta tctcaagaga ttcgtgcagc CD 851 ggaggatcct gaatctgaaa ctttctacac taaaaatatt cttctgaatg CD 901 aaggtattcg tgcttggatg gcggctCaag atcagcctca tgaaa SQ SEQUENCE 315 AA; RDRFVFVGWS GLLLFPCAYF ALGGWFTGTT FVSSRYTHGL ASSYLEGCNF LTAAVSTSVN SLAHFLLLLW GPEAQGDFTC WCQLGGLWTF VALHGAFGLI GFMLRQFELA RSVQLRLYNA IAFSGPIAVF VSVFLIYPLG QSGWFFALSF GVAAISRFIL FF*GFHNWTL NLFHMMGVAG VLGVALLCVI YGATVENTLF EDGDGANTFR AFNPTQSEET YSMVTANRFW SQIFGVAFPN KRWLHFFMLF VPVTGLWMSA IGVVGLALNL RAYDFVSQEI RAAEDPESET FYTKNILLNE GIRAWMAAQD QPHEX // ID AB013668_1 STANDARD; PRT; 435 AA. AC AB013668; DT Tue Jul 21 07:00:00 2009 DE Anthoceros punctatus chloroplast rbcL gene for ribulose OS chloroplast Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT N-terminal not determined FT C-terminal not determined FT GENE : rbcL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA83444.1 FT PROTEIN_NAME : ribulose-1,5-bisphosphate carboxylase/oxygenase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 1303 FT DIRECTIONS : positive FT EDITING : 27 *(Tga) -> R(Cga) FT EDITING : 31 *(Taa) -> Q(Caa) FT EDITING : 407 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 1303 NT; CD 1 gctggtgtta aagattatag attaacccat tatacccctg attacgagac CD 51 caaggatact gatattttgg cagcgtctTg aatgactcct Taaccagggg CD 101 tgccacctga agaagcagga gccgcagtag ctgctgaatc ttcaactggt CD 151 acatggacta ctgtttggac cgatggactt accagccttg accgttacaa CD 201 aggtcgatgc tacgacattg aacctgttgc tggagaggaa aatcaatata CD 251 ttgcttatgc tgtttatttt ttagatttgt ttgaggaggg ttctgttacc CD 301 aacatgttca cttccattgt aggtaatgtt tttggattta aagctttacg CD 351 agcttcacgt ctagaagatt cacgaattcc acttgcttat tccaaaatct CD 401 ttcaaggtcc acctcatggt attcaagttg aaagggataa atcgaataaa CD 451 tatggtcgtc ctttattagg atgtaccatt aaaccaaagt taggtttatc CD 501 tgccaaaaac tatggtagag ctgtatatga atgtcttcgt ggtggacttg CD 551 atttcaccaa agatgacgaa aatgttaatt ctcaaccttt tatgcgttgg CD 601 agagatcgtt ttctattggt agcagaagct atttctaaat ctcaagctga CD 651 aacaggagag attaaagggc attacttaaa tgccactgca ggtacatgtg CD 701 aggaaatgat gaaaagggca caatttgcta gagaattagg aatgcctatc CD 751 gtaatgcatg attatttgac aggaggtttt attgtaaata tgattctggc CD 801 tcattattgt agagacaatg gtttacttct tcatattcat cgtgctatgt CD 851 atgtagttac tgacagacaa ggaaatcatg gtattcactt tcgtgtatca CD 901 gctaaagcat cacgtatgtc cgggggagat catattcatc caggtatagt CD 951 agtaggtaaa ttagagggag aatgtgaagt aactttaggt tttgtggatt CD 1001 taccttgtga cgattatatt gaaaaagata gaagttgtgg gatatatttt CD 1051 actcaagact gggtctctat gcctggtgtt ttgcctgtgg cctcaggtgg CD 1101 tattcatgtt tggcatatgt tagctttaac tgagattttc ggagatgatt CD 1151 ccgtactaca gtttggcggg ggaactctag gacacccttg gggaaatgca CD 1201 cctggtgcag tagctaatTg agttgcttta gaagcttgtg tgcaagctcg CD 1251 taatgaagga cgtgatcttg cttgcgaggg taatgatatt atccgtgaag CD 1301 cta FT EDITED CDNA CD 1 gctggtgtta aagattatag attaacccat tatacccctg attacgagac CD 51 caaggatact gatattttgg cagcgtctCg aatgactcct Caaccagggg CD 101 tgccacctga agaagcagga gccgcagtag ctgctgaatc ttcaactggt CD 151 acatggacta ctgtttggac cgatggactt accagccttg accgttacaa CD 201 aggtcgatgc tacgacattg aacctgttgc tggagaggaa aatcaatata CD 251 ttgcttatgc tgtttatttt ttagatttgt ttgaggaggg ttctgttacc CD 301 aacatgttca cttccattgt aggtaatgtt tttggattta aagctttacg CD 351 agcttcacgt ctagaagatt cacgaattcc acttgcttat tccaaaatct CD 401 ttcaaggtcc acctcatggt attcaagttg aaagggataa atcgaataaa CD 451 tatggtcgtc ctttattagg atgtaccatt aaaccaaagt taggtttatc CD 501 tgccaaaaac tatggtagag ctgtatatga atgtcttcgt ggtggacttg CD 551 atttcaccaa agatgacgaa aatgttaatt ctcaaccttt tatgcgttgg CD 601 agagatcgtt ttctattggt agcagaagct atttctaaat ctcaagctga CD 651 aacaggagag attaaagggc attacttaaa tgccactgca ggtacatgtg CD 701 aggaaatgat gaaaagggca caatttgcta gagaattagg aatgcctatc CD 751 gtaatgcatg attatttgac aggaggtttt attgtaaata tgattctggc CD 801 tcattattgt agagacaatg gtttacttct tcatattcat cgtgctatgt CD 851 atgtagttac tgacagacaa ggaaatcatg gtattcactt tcgtgtatca CD 901 gctaaagcat cacgtatgtc cgggggagat catattcatc caggtatagt CD 951 agtaggtaaa ttagagggag aatgtgaagt aactttaggt tttgtggatt CD 1001 taccttgtga cgattatatt gaaaaagata gaagttgtgg gatatatttt CD 1051 actcaagact gggtctctat gcctggtgtt ttgcctgtgg cctcaggtgg CD 1101 tattcatgtt tggcatatgt tagctttaac tgagattttc ggagatgatt CD 1151 ccgtactaca gtttggcggg ggaactctag gacacccttg gggaaatgca CD 1201 cctggtgcag tagctaatCg agttgcttta gaagcttgtg tgcaagctcg CD 1251 taatgaagga cgtgatcttg cttgcgaggg taatgatatt atccgtgaag CD 1301 cta SQ SEQUENCE 435 AA; AGVKDYRLTH YTPDYETKDT DILAASRMTP QPGVPPEEAG AAVAAESSTG TWTTVWTDGL TSLDRYKGRC YDIEPVAGEE NQYIAYAVYF LDLFEEGSVT NMFTSIVGNV FGFKALRASR LEDSRIPLAY SKIFQGPPHG IQVERDKSNK YGRPLLGCTI KPKLGLSAKN YGRAVYECLR GGLDFTKDDE NVNSQPFMRW RDRFLLVAEA ISKSQAETGE IKGHYLNATA GTCEEMMKRA QFARELGMPI VMHDYLTGGF IVNMILAHYC RDNGLLLHIH RAMYVVTDRQ GNHGIHFRVS AKASRMSGGD HIHPGIVVGK LEGECEVTLG FVDLPCDDYI EKDRSCGIYF TQDWVSMPGV LPVASGGIHV WHMLALTEIF GDDSVLQFGG GTLGHPWGNA PGAVANRVAL EACVQARNEG RDLACEGNDI IREAX // ID AB013669_1 STANDARD; PRT; 328 AA. AC AB013669; DT Tue Jul 21 07:00:00 2009 DE Anthoceros punctatus chloroplast rpoC2 gene for DNA-directed RNA OS chloroplast Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoC2 FT NOTE : start codon is not identified FT LOCUS_TAG : FT PROTEIN_ID : BAA83445.1 FT PROTEIN_NAME : DNA-directed RNA polymerase beta'-2 chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 940 - 1922 FT DIRECTIONS : positive FT EDITING : 48 *(Taa) -> Q(Caa) FT EDITING : 73 *(Taa) -> Q(Caa) FT EDITING : 113 *(Taa) -> Q(Caa) FT EDITING : 137 *(Tga) -> R(Cga) FT EDITING : 142 *(Taa) -> Q(Caa) FT EDITING : 145 *(Taa) -> Q(Caa) FT EDITING : 157 *(Tag) -> Q(Cag) FT EDITING : 195 *(Tga) -> R(Cga) FT EDITING : 211 *(Taa) -> Q(Caa) FT EDITING : 224 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 983 NT; CD 1 gtggcagaat cagctaaatt gctattctat aataaagtaa tagatggaac CD 51 tgcgataaaa caatttattg gcagattagt agctcacttt ggaattacat CD 101 atacagctca cattttggat caacctaaaa ctctgggttt tTaacaagct CD 151 acttatgccg ttactttatt aggcattgac gatctcttaa cagtactgtc CD 201 aaagggatgg ctcattTaag atgcggaaca tcatagttat actttggaga CD 251 agcatcatcg ctatgggaat gtacatgctg cggaaaaatt acgtcaactc CD 301 attgaaacat ggtatgctac gagtgagtat tcaaaaTaag aaatgaatcc CD 351 taatttcaga atgactgatc ccttaaatcc ggtacatatg atgtcttttt CD 401 caggagctTg aggaagtgca tcaTaagttt atTaattagt aggtatgaga CD 451 ggattagtgt cagattttTa gggacaaatt attgatttac ttattaagag CD 501 taatttccgc gagggattat ctttgaccga atatattatt tcttgttacg CD 551 gtgcttgtaa aggagttgtt gatactgtcg tgTgaatatt agatgctgga CD 601 taccttacat gcagacttgt tgaagtggtt Taacatattg tagtacgtaa CD 651 aacagattgt aatacttttT gaggtatttc tttgaattct accgaagata CD 701 agaagaaaaa tttacaaata tttactcagc aaaaactagt gggtcgtgta CD 751 ctagcagata atttatatat aaatgcaaga tgtcttgcta tatgtaatca CD 801 agatattaat actaatttta ttgaaaaatc aataactctt aaaacaccat CD 851 caatttcaat acgatctccc ttgacttgca aaagtatgct ttggatttgt CD 901 caattatgct atggatggag tcttactcac tacggtgatt tagtagaatt CD 951 gggagaagct gtgggtatta ttgnaggcan tct FT EDITED CDNA CD 1 gtggcagaat cagctaaatt gctattctat aataaagtaa tagatggaac CD 51 tgcgataaaa caatttattg gcagattagt agctcacttt ggaattacat CD 101 atacagctca cattttggat caacctaaaa ctctgggttt tCaacaagct CD 151 acttatgccg ttactttatt aggcattgac gatctcttaa cagtactgtc CD 201 aaagggatgg ctcattCaag atgcggaaca tcatagttat actttggaga CD 251 agcatcatcg ctatgggaat gtacatgctg cggaaaaatt acgtcaactc CD 301 attgaaacat ggtatgctac gagtgagtat tcaaaaCaag aaatgaatcc CD 351 taatttcaga atgactgatc ccttaaatcc ggtacatatg atgtcttttt CD 401 caggagctCg aggaagtgca tcaCaagttt atCaattagt aggtatgaga CD 451 ggattagtgt cagattttCa gggacaaatt attgatttac ttattaagag CD 501 taatttccgc gagggattat ctttgaccga atatattatt tcttgttacg CD 551 gtgcttgtaa aggagttgtt gatactgtcg tgCgaatatt agatgctgga CD 601 taccttacat gcagacttgt tgaagtggtt Caacatattg tagtacgtaa CD 651 aacagattgt aatacttttC gaggtatttc tttgaattct accgaagata CD 701 agaagaaaaa tttacaaata tttactcagc aaaaactagt gggtcgtgta CD 751 ctagcagata atttatatat aaatgcaaga tgtcttgcta tatgtaatca CD 801 agatattaat actaatttta ttgaaaaatc aataactctt aaaacaccat CD 851 caatttcaat acgatctccc ttgacttgca aaagtatgct ttggatttgt CD 901 caattatgct atggatggag tcttactcac tacggtgatt tagtagaatt CD 951 gggagaagct gtgggtatta ttgnaggcan tct SQ SEQUENCE 328 AA; VAESAKLLFY NKVIDGTAIK QFIGRLVAHF GITYTAHILD QPKTLGFQQA TYAVTLLGID DLLTVLSKGW LIQDAEHHSY TLEKHHRYGN VHAAEKLRQL IETWYATSEY SKQEMNPNFR MTDPLNPVHM MSFSGARGSA SQVYQLVGMR GLVSDFQGQI IDLLIKSNFR EGLSLTEYII SCYGACKGVV DTVVRILDAG YLTCRLVEVV QHIVVRKTDC NTFRGISLNS TEDKKKNLQI FTQQKLVGRV LADNLYINAR CLAICNQDIN TNFIEKSITL KTPSISIRSP LTCKSMLWIC QLCYGWSLTH YGDLVELGEA VGIIXGXL // ID AB013683_1 STANDARD; PRT; 318 AA. AC AB013683; DT Tue Jul 21 07:00:00 2009 DE Adiantum capillus-veneris chloroplast rpoC2 gene for DNA-directed OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT C-terminal not determined FT GENE : rpoC2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA83459.1 FT PROTEIN_NAME : DNA-directed RNA polymerase beta'-2 chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1036 - 1988 FT DIRECTIONS : positive FT EDITING : 78 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 953 NT; CD 1 atgatggatc gaaatgaatt acctttctgc aacaagacga tcgatagggc CD 51 tgcgatgaag agactcatcg gcaagttagt tgtttgtttc ggaattgcgt CD 101 ctacaacaaa tatctcagat caagtgaaag ttttgggttt tcagcaagct CD 151 acagaagcat ctatctcatc gggtattgac gacctttcag cagtaccaac CD 201 cagaggttgg cttgtacgag acgcggagaa aTaaggttac gtctcggagg CD 251 ggcattaccg ctgcggaagt ctgcatgcca tagaaaagtt gcgtcaatca CD 301 attgaagcct ggtatgccac aagtgaatgt ttgaaacgag aaatgagtcc CD 351 aagtttcaag atgattgatc ctttgaatcc cgttcacatg atgtctgttt CD 401 caggagcccg agggaccatc tcccaggtcc accaattgct tggcatgagg CD 451 ggattaatgg cagatcctcg aggtcaggta attgacctac ctatccgaag CD 501 aaatctgcgc gaaggtttat ccctgacaga atatattatt tctcgctacg CD 551 gtgctcgcaa aggggttgtg gataccgccg tgcgaacttc agatgccgga CD 601 tacctaacac gtagacttgt cgaagttgtt caacatattg ctgtacgaag CD 651 aagggattgt gaaactccta gaagtctcgc ttttttgact tcaaatactg CD 701 gcgaacgaag acgaggattt cttggcacga tgccgcatca gggattggtt CD 751 ggacgtgtgt tggcggatca tgtttactgg gatgttagat gtattgccac CD 801 ccgtaaccaa gatattagcg acggattggc tagtaacttg atggcgtcct CD 851 cgcagccaat acatgtgaga tctcctttga catgcaaaag cattttccgg CD 901 atttgtcagt tctgctacgg ttggagcctt gcccattgca atttagtaga CD 951 att FT EDITED CDNA CD 1 atgatggatc gaaatgaatt acctttctgc aacaagacga tcgatagggc CD 51 tgcgatgaag agactcatcg gcaagttagt tgtttgtttc ggaattgcgt CD 101 ctacaacaaa tatctcagat caagtgaaag ttttgggttt tcagcaagct CD 151 acagaagcat ctatctcatc gggtattgac gacctttcag cagtaccaac CD 201 cagaggttgg cttgtacgag acgcggagaa aCaaggttac gtctcggagg CD 251 ggcattaccg ctgcggaagt ctgcatgcca tagaaaagtt gcgtcaatca CD 301 attgaagcct ggtatgccac aagtgaatgt ttgaaacgag aaatgagtcc CD 351 aagtttcaag atgattgatc ctttgaatcc cgttcacatg atgtctgttt CD 401 caggagcccg agggaccatc tcccaggtcc accaattgct tggcatgagg CD 451 ggattaatgg cagatcctcg aggtcaggta attgacctac ctatccgaag CD 501 aaatctgcgc gaaggtttat ccctgacaga atatattatt tctcgctacg CD 551 gtgctcgcaa aggggttgtg gataccgccg tgcgaacttc agatgccgga CD 601 tacctaacac gtagacttgt cgaagttgtt caacatattg ctgtacgaag CD 651 aagggattgt gaaactccta gaagtctcgc ttttttgact tcaaatactg CD 701 gcgaacgaag acgaggattt cttggcacga tgccgcatca gggattggtt CD 751 ggacgtgtgt tggcggatca tgtttactgg gatgttagat gtattgccac CD 801 ccgtaaccaa gatattagcg acggattggc tagtaacttg atggcgtcct CD 851 cgcagccaat acatgtgaga tctcctttga catgcaaaag cattttccgg CD 901 atttgtcagt tctgctacgg ttggagcctt gcccattgca atttagtaga CD 951 att SQ SEQUENCE 318 AA; MMDRNELPFC NKTIDRAAMK RLIGKLVVCF GIASTTNISD QVKVLGFQQA TEASISSGID DLSAVPTRGW LVRDAEKQGY VSEGHYRCGS LHAIEKLRQS IEAWYATSEC LKREMSPSFK MIDPLNPVHM MSVSGARGTI SQVHQLLGMR GLMADPRGQV IDLPIRRNLR EGLSLTEYII SRYGARKGVV DTAVRTSDAG YLTRRLVEVV QHIAVRRRDC ETPRSLAFLT SNTGERRRGF LGTMPHQGLV GRVLADHVYW DVRCIATRNQ DISDGLASNL MASSQPIHVR SPLTCKSIFR ICQFCYGWSL AHCNLVEX // ID AB015175_1 STANDARD; PRT; 258 AA. AC AB015175; DT Tue Jul 21 07:00:00 2009 DE Beta vulgaris mitochondrial atp6 gene for F0-ATPase subunit 6, OS mitochondrion Beta vulgaris OC Beta vulgaris RN [1] RL J. Plant Physiol. 155, 656-660 (1999) FT Full length CDS FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA36470.2 FT PROTEIN_NAME : F0-ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 86 - 859 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 31 P(Cca) -> S(Tca) FT EDITING : 57 S(tCa) -> L(tTa) FT EDITING : 106 R(Cgt) -> C(Tgt) FT EDITING : 152 S(tCa) -> L(tTa) FT EDITING : 172 P(Cct) -> S(Tct) FT EDITING : 173 H(Cat) -> Y(Tat) FT EDITING : 180 S(tCa) -> L(tTa) FT EDITING : 194 S(tCa) -> L(tTa) FT EDITING : 240 H(Cat) -> Y(Tat) FT EDITING : 254 T(aCa) -> I(aTa) FT EDITING : 258 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 774 NT; CD 1 aCgattacgc ccaacagccc acttgagcaa ttttccattc tcccattgat CD 51 tcctatgaaa ataggaaact tgtatttctc attcacaaat Ccatctttgt CD 101 ttatgctgct aactctcagt ttggtcctac ttctgcttca ttttgttact CD 151 aaaaagggag gaggaaactC agtaccaaat gtttggcaat ccttggtaga CD 201 gcttatttat gatttcgtgc tgaacctggt aaacgaacaa ataggtggtc CD 251 tttccggaaa tgttaaacaa aagtttttcc cttgcatctt ggtcactttt CD 301 acttttttgt tatttCgtaa tctccagggt atgataccct atagctttac CD 351 agttacaagt cattttctca ttactttggg tctttcattt tccattttta CD 401 ttggcattac tatagtggga tttcaaagaa atgggcttca ttttttaagc CD 451 ttctCattac ctgcaggagt cccgctgccg ttagcacctt ttttagtact CD 501 ccttgagcta atcCctCatt gttttcgcgc attaagctCa ggaatacgtt CD 551 tatttgctaa tatgatggcc ggtcatagtt Cagtaaagat tttaagtggg CD 601 ttcgcttgga ctatgctatg tatgaatgat cttttatatt tcataggaga CD 651 tcttggtcct ttatttatag ttcttgcatt aaccggtctt gaattaggtg CD 701 tagctatatt acaagctCat gtttttacga tcttaatctg tatttacttg CD 751 aatgatgcta Caaatctcca tCaa FT EDITED CDNA CD 1 aTgattacgc ccaacagccc acttgagcaa ttttccattc tcccattgat CD 51 tcctatgaaa ataggaaact tgtatttctc attcacaaat Tcatctttgt CD 101 ttatgctgct aactctcagt ttggtcctac ttctgcttca ttttgttact CD 151 aaaaagggag gaggaaactT agtaccaaat gtttggcaat ccttggtaga CD 201 gcttatttat gatttcgtgc tgaacctggt aaacgaacaa ataggtggtc CD 251 tttccggaaa tgttaaacaa aagtttttcc cttgcatctt ggtcactttt CD 301 acttttttgt tatttTgtaa tctccagggt atgataccct atagctttac CD 351 agttacaagt cattttctca ttactttggg tctttcattt tccattttta CD 401 ttggcattac tatagtggga tttcaaagaa atgggcttca ttttttaagc CD 451 ttctTattac ctgcaggagt cccgctgccg ttagcacctt ttttagtact CD 501 ccttgagcta atcTctTatt gttttcgcgc attaagctTa ggaatacgtt CD 551 tatttgctaa tatgatggcc ggtcatagtt Tagtaaagat tttaagtggg CD 601 ttcgcttgga ctatgctatg tatgaatgat cttttatatt tcataggaga CD 651 tcttggtcct ttatttatag ttcttgcatt aaccggtctt gaattaggtg CD 701 tagctatatt acaagctTat gtttttacga tcttaatctg tatttacttg CD 751 aatgatgcta Taaatctcca tTaa SQ SEQUENCE 258 AA; MITPNSPLEQ FSILPLIPMK IGNLYFSFTN SSLFMLLTLS LVLLLLHFVT KKGGGNLVPN VWQSLVELIY DFVLNLVNEQ IGGLSGNVKQ KFFPCILVTF TFLLFCNLQG MIPYSFTVTS HFLITLGLSF SIFIGITIVG FQRNGLHFLS FLLPAGVPLP LAPFLVLLEL ISYCFRALSL GIRLFANMMA GHSLVKILSG FAWTMLCMND LLYFIGDLGP LFIVLALTGL ELGVAILQAY VFTILICIYL NDAINLH* // ID AB015176_1 STANDARD; PRT; 640 AA. AC AB015176; DT Tue Jul 21 07:00:00 2009 DE Beta vulgaris mitochondrial atp6 gene for F0-ATPase subunit 6, OS mitochondrion Beta vulgaris OC Beta vulgaris RN [1] RL J. Plant Physiol. 155, 656-660 (1999) FT Full length CDS FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA36471.2 FT PROTEIN_NAME : F0-ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 112 - 2031 FT DIRECTIONS : positive FT EDITING : 2 I(atC) -> I(atT) FT EDITING : 264 I(atC) -> I(atT) FT EDITING : 413 P(Cca) -> S(Tca) FT EDITING : 439 S(tCa) -> L(tTa) FT EDITING : 488 R(Cgt) -> C(Tgt) FT EDITING : 534 S(tCa) -> L(tTa) FT EDITING : 554 P(Cct) -> S(Tct) FT EDITING : 555 H(Cat) -> Y(Tat) FT EDITING : 562 S(tCa) -> L(tTa) FT EDITING : 576 S(tCa) -> L(tTa) FT EDITING : 622 H(Cat) -> Y(Tat) FT EDITING : 636 T(aCa) -> I(aTa) FT EDITING : 640 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1920 NT; CD 1 atgatCacta agtctaagaa ggagatgatt gcttatgcaa agcagataat CD 51 tacaaatgtc cctcgaccta catggcgagt attattcgga ctcagcgtgc CD 101 tcttcaccct cttttggtcc gggagaagcg gaatggttga aacgaaatta CD 151 attctccaag cactctttgg catagcaaca gcggctgctt ttttgttttt CD 201 ttgttattcc cattcccgga cgcgggagca cttcctctat acaattctaa CD 251 taacgctttc tttggcttta ctcttcaaaa agggggcttt ccctcttttt CD 301 gaattcgccc ctttggctat attgatcttt tcggtttgct tctttcccaa CD 351 aaatggacga ttacggtatt cgctagagaa ctgttctttt tttctcctat CD 401 tactttgggg ggattaccgg cttttggata ctccgtggtg tgaatgggta CD 451 ctctatgttt gtggcctctt aactttattc acgcttcttc aagcgatggt CD 501 ccatcgaaag gaggaagggg tcggcaagtt tcttctaccg gctgccttcc CD 551 taattagtga cctcgtgctc ctttggcttc actcgggggc gattcagaat CD 601 ccgctgggaa aggcggccct aacgggcgcc gcagtcctaa tactctttag CD 651 ccaagcctcc gccgagtcca caaggcagcg ggagcttgca aatggggcgt CD 701 atctcatgtg tatccctcct atactatata tcataggagg ggccacggat CD 751 tggccccgat tcgtaaacga actcaccttt tttattctta tCctctggct CD 801 agtcttagtt ttttgggttg ttactttgga ggacgaaaaa gagcagaagg CD 851 atctgctccc gctcctatct gcgatcttct ccgctttggc gtcgccgagt CD 901 tacggccccg acgtctgggt aaaagagtgg ctcgccgcct tttccttaac CD 951 cattggggcg gtttttttgt ttgagaaggt aggctaccgc aaagataccc CD 1001 ttccagaaac gtcccgtact tgggaacctt ggttttgctt ttttgctgtt CD 1051 ctttcttttg gtgttgcact tagttttttt catgcatcac ccgccctagg CD 1101 ggtgggaact gaaagtgaag cttttcacga tgcgattaat ccagcagcgg CD 1151 gacggatccc cagcccccta gagcaatttt ccattctccc attgattcct CD 1201 atgaaaatag gaaacttgta tttctcattc acaaatCcat ctttgtttat CD 1251 gctgctaact ctcagtttgg tcctacttct gcttcatttt gttactaaaa CD 1301 agggaggagg aaactCagta ccaaatgttt ggcaatcctt ggtagagctt CD 1351 atttatgatt tcgtgctgaa cctggtaaac gaacaaatag gtggtctttc CD 1401 cggaaatgtt aaacaaaagt ttttcccttg catcttggtc acttttactt CD 1451 ttttgttatt tCgtaatctc cagggtatga taccctatag ctttacagtt CD 1501 acaagtcatt ttctcattac tttgggtctt tcattttcca tttttattgg CD 1551 cattactata gtgggatttc aaagaaatgg gcttcatttt ttaagcttct CD 1601 Cattacctgc aggagtcccg ctgccgttag cacccttttt agtactcctt CD 1651 gagctaatcC ctCattgttt tcgcgcatta agctCaggaa tacgtttatt CD 1701 tgctaatatg atggccggtc atagttCagt aaagatttta agtgggttcg CD 1751 cttggactat gctatgtatg aatgatcttt tatatttcat aggagatctt CD 1801 ggtcctttat ttatagttct tgcattaacc ggtcttgaat taggtgtagc CD 1851 tatattacaa gctCatgttt ttacgatctt aatctgtatt tacttgaatg CD 1901 atgctaCaaa tctccatCaa FT EDITED CDNA CD 1 atgatTacta agtctaagaa ggagatgatt gcttatgcaa agcagataat CD 51 tacaaatgtc cctcgaccta catggcgagt attattcgga ctcagcgtgc CD 101 tcttcaccct cttttggtcc gggagaagcg gaatggttga aacgaaatta CD 151 attctccaag cactctttgg catagcaaca gcggctgctt ttttgttttt CD 201 ttgttattcc cattcccgga cgcgggagca cttcctctat acaattctaa CD 251 taacgctttc tttggcttta ctcttcaaaa agggggcttt ccctcttttt CD 301 gaattcgccc ctttggctat attgatcttt tcggtttgct tctttcccaa CD 351 aaatggacga ttacggtatt cgctagagaa ctgttctttt tttctcctat CD 401 tactttgggg ggattaccgg cttttggata ctccgtggtg tgaatgggta CD 451 ctctatgttt gtggcctctt aactttattc acgcttcttc aagcgatggt CD 501 ccatcgaaag gaggaagggg tcggcaagtt tcttctaccg gctgccttcc CD 551 taattagtga cctcgtgctc ctttggcttc actcgggggc gattcagaat CD 601 ccgctgggaa aggcggccct aacgggcgcc gcagtcctaa tactctttag CD 651 ccaagcctcc gccgagtcca caaggcagcg ggagcttgca aatggggcgt CD 701 atctcatgtg tatccctcct atactatata tcataggagg ggccacggat CD 751 tggccccgat tcgtaaacga actcaccttt tttattctta tTctctggct CD 801 agtcttagtt ttttgggttg ttactttgga ggacgaaaaa gagcagaagg CD 851 atctgctccc gctcctatct gcgatcttct ccgctttggc gtcgccgagt CD 901 tacggccccg acgtctgggt aaaagagtgg ctcgccgcct tttccttaac CD 951 cattggggcg gtttttttgt ttgagaaggt aggctaccgc aaagataccc CD 1001 ttccagaaac gtcccgtact tgggaacctt ggttttgctt ttttgctgtt CD 1051 ctttcttttg gtgttgcact tagttttttt catgcatcac ccgccctagg CD 1101 ggtgggaact gaaagtgaag cttttcacga tgcgattaat ccagcagcgg CD 1151 gacggatccc cagcccccta gagcaatttt ccattctccc attgattcct CD 1201 atgaaaatag gaaacttgta tttctcattc acaaatTcat ctttgtttat CD 1251 gctgctaact ctcagtttgg tcctacttct gcttcatttt gttactaaaa CD 1301 agggaggagg aaactTagta ccaaatgttt ggcaatcctt ggtagagctt CD 1351 atttatgatt tcgtgctgaa cctggtaaac gaacaaatag gtggtctttc CD 1401 cggaaatgtt aaacaaaagt ttttcccttg catcttggtc acttttactt CD 1451 ttttgttatt tTgtaatctc cagggtatga taccctatag ctttacagtt CD 1501 acaagtcatt ttctcattac tttgggtctt tcattttcca tttttattgg CD 1551 cattactata gtgggatttc aaagaaatgg gcttcatttt ttaagcttct CD 1601 Tattacctgc aggagtcccg ctgccgttag cacccttttt agtactcctt CD 1651 gagctaatcT ctTattgttt tcgcgcatta agctTaggaa tacgtttatt CD 1701 tgctaatatg atggccggtc atagttTagt aaagatttta agtgggttcg CD 1751 cttggactat gctatgtatg aatgatcttt tatatttcat aggagatctt CD 1801 ggtcctttat ttatagttct tgcattaacc ggtcttgaat taggtgtagc CD 1851 tatattacaa gctTatgttt ttacgatctt aatctgtatt tacttgaatg CD 1901 atgctaTaaa tctccatTaa SQ SEQUENCE 640 AA; MITKSKKEMI AYAKQIITNV PRPTWRVLFG LSVLFTLFWS GRSGMVETKL ILQALFGIAT AAAFLFFCYS HSRTREHFLY TILITLSLAL LFKKGAFPLF EFAPLAILIF SVCFFPKNGR LRYSLENCSF FLLLLWGDYR LLDTPWCEWV LYVCGLLTLF TLLQAMVHRK EEGVGKFLLP AAFLISDLVL LWLHSGAIQN PLGKAALTGA AVLILFSQAS AESTRQRELA NGAYLMCIPP ILYIIGGATD WPRFVNELTF FILILWLVLV FWVVTLEDEK EQKDLLPLLS AIFSALASPS YGPDVWVKEW LAAFSLTIGA VFLFEKVGYR KDTLPETSRT WEPWFCFFAV LSFGVALSFF HASPALGVGT ESEAFHDAIN PAAGRIPSPL EQFSILPLIP MKIGNLYFSF TNSSLFMLLT LSLVLLLLHF VTKKGGGNLV PNVWQSLVEL IYDFVLNLVN EQIGGLSGNV KQKFFPCILV TFTFLLFCNL QGMIPYSFTV TSHFLITLGL SFSIFIGITI VGFQRNGLHF LSFLLPAGVP LPLAPFLVLL ELISYCFRAL SLGIRLFANM MAGHSLVKIL SGFAWTMLCM NDLLYFIGDL GPLFIVLALT GLELGVAILQ AYVFTILICI YLNDAINLH* // ID AB015177_1 STANDARD; PRT; 642 AA. AC AB015177; DT Tue Jul 21 07:00:00 2009 DE Beta vulgaris mitochondrial atp6 gene for F0-ATPase subunit 6, OS mitochondrion Beta vulgaris OC Beta vulgaris RN [1] RL J. Plant Physiol. 155, 656-660 (1999) FT Full length CDS FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA36472.2 FT PROTEIN_NAME : F0-ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 340 - 2265 FT DIRECTIONS : positive FT EDITING : 97 P(ccC) -> P(ccT) FT EDITING : 266 L(ctC) -> L(ctT) FT EDITING : 415 P(Cca) -> S(Tca) FT EDITING : 441 S(tCa) -> L(tTa) FT EDITING : 490 R(Cgt) -> C(Tgt) FT EDITING : 536 S(tCa) -> L(tTa) FT EDITING : 556 P(Cct) -> S(Tct) FT EDITING : 557 H(Cat) -> Y(Tat) FT EDITING : 564 S(tCa) -> L(tTa) FT EDITING : 578 S(tCa) -> L(tTa) FT EDITING : 624 H(Cat) -> Y(Tat) FT EDITING : 638 T(aCa) -> I(aTa) FT EDITING : 642 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1926 NT; CD 1 atgatgactc attggaagaa ggagataact gctttggcaa accagataat CD 51 tactaatgtc cctcgaccta cacggcgagt cttattcgga ctcggcgtgc CD 101 tgttcaccct ctttgaggtc gggagacacg ggctgttgtt tgaaacggaa CD 151 attattctac aagccctctt tggcatagga acagcggctt ctattttgtt CD 201 tttttgtaat ttccgcaccc gagagcactt tctctataca tttctactaa CD 251 cgatttattt ggctttattc ttcctaaaga gggctttccc Ccttttggaa CD 301 ttcgcctttt tggctatatt gatcttttcg gtttgcttct ttcctaaaaa CD 351 tggacgatta cggcattcgc tagagaactg ttcttttatt ttcctactcc CD 401 tttgggggag ttaccggctt ttggagactc cgtggcacga atggccactc CD 451 tatgtttgtg gtctcttaat gttattcacg cttcttcaag cgctggtcca CD 501 tcgaaaggac gaaggggtcg gcaagtttat tctgccggct accttcctaa CD 551 ttttaatgag tgccctcgtg ctccttgggc ttcactcagg ggcgattcat CD 601 aatctaccgg aaaaggcggc cctaacgggc gccgcagtct taataatctt CD 651 tagccaagcg gccgccgagt ccacaaggga gcggtggctt gcaattgggg CD 701 cgtatctcat gtgtatcccg tgtatactat atatcctagg aggggccacg CD 751 gattggcccc tattcgtaca acaaatccgc cttttttttt ttatcctCgg CD 801 cctagtattc ggtttttttt gggttgttac ttatgaggac gtaaaagagc CD 851 agaaggatct gctcccgatc ctatctgcga tcttctccac tttggcgtcg CD 901 gcgaggtgtg gccccggcgt ctgggtaaaa gagtggctcg gcgccttttc CD 951 cttcaccatt ggggcgtatt ttttatttga gaaggtaggc taccgcaaag CD 1001 atacccttca agaaacgtcc cgtacttggg aagcttggtt ttgctttttt CD 1051 gctgttcttt cttttggtgt tgcacttagt ttttttcatg catcacccgc CD 1101 cccaggggtc ggaactgaaa gtgaagcttt tcacgatgcg attaatccag CD 1151 cagcgggacg gatccccagc ccgctagagc aattttccat tctcccattg CD 1201 attcctatga aaataggaaa cttgtatttc tcattcacaa atCcatcttt CD 1251 gtttatgctg ctaactctca gtttggtcct acttctgctt cattttgtta CD 1301 ctaaaaaggg aggaggaaac tCagtaccaa atgtttggca atccttggta CD 1351 gagcttattt atgatttcgt gctgaacctg gtaaacgaac aaataggtgg CD 1401 tctttccgga aatgtgaaac aaaagttttt cccttgcatc ttggtcactt CD 1451 ttactttttt gttatttCgt aatctccagg gtatgatacc ctatagcttt CD 1501 acagttacaa gtcattttct cattactttg ggtctttcat tttccatttt CD 1551 tattggcatt actatagtgg gatttcaaag aaatgggctt cattttttaa CD 1601 gcttctCatt acctgcagga gtcccgctgc cgttagcacc ttttttagta CD 1651 ctccttgagc taatcCctCa ttgttttcgc gcattaagct Caggaatacg CD 1701 tttatttgct aatatgatgg ccggtcatag ttCagtaaag attttaagtg CD 1751 ggttcgcttg gactatgcta tgtatgaatg atcttttata tttcatagga CD 1801 gatcttggtc ctttatttat agttcttgca ttaaccggtc ttgaattagg CD 1851 tgtagctata ttacaagctC atgtttttac gatcttaatc tgtatttact CD 1901 tgaatgatgc taCaaatctc catCaa FT EDITED CDNA CD 1 atgatgactc attggaagaa ggagataact gctttggcaa accagataat CD 51 tactaatgtc cctcgaccta cacggcgagt cttattcgga ctcggcgtgc CD 101 tgttcaccct ctttgaggtc gggagacacg ggctgttgtt tgaaacggaa CD 151 attattctac aagccctctt tggcatagga acagcggctt ctattttgtt CD 201 tttttgtaat ttccgcaccc gagagcactt tctctataca tttctactaa CD 251 cgatttattt ggctttattc ttcctaaaga gggctttccc Tcttttggaa CD 301 ttcgcctttt tggctatatt gatcttttcg gtttgcttct ttcctaaaaa CD 351 tggacgatta cggcattcgc tagagaactg ttcttttatt ttcctactcc CD 401 tttgggggag ttaccggctt ttggagactc cgtggcacga atggccactc CD 451 tatgtttgtg gtctcttaat gttattcacg cttcttcaag cgctggtcca CD 501 tcgaaaggac gaaggggtcg gcaagtttat tctgccggct accttcctaa CD 551 ttttaatgag tgccctcgtg ctccttgggc ttcactcagg ggcgattcat CD 601 aatctaccgg aaaaggcggc cctaacgggc gccgcagtct taataatctt CD 651 tagccaagcg gccgccgagt ccacaaggga gcggtggctt gcaattgggg CD 701 cgtatctcat gtgtatcccg tgtatactat atatcctagg aggggccacg CD 751 gattggcccc tattcgtaca acaaatccgc cttttttttt ttatcctTgg CD 801 cctagtattc ggtttttttt gggttgttac ttatgaggac gtaaaagagc CD 851 agaaggatct gctcccgatc ctatctgcga tcttctccac tttggcgtcg CD 901 gcgaggtgtg gccccggcgt ctgggtaaaa gagtggctcg gcgccttttc CD 951 cttcaccatt ggggcgtatt ttttatttga gaaggtaggc taccgcaaag CD 1001 atacccttca agaaacgtcc cgtacttggg aagcttggtt ttgctttttt CD 1051 gctgttcttt cttttggtgt tgcacttagt ttttttcatg catcacccgc CD 1101 cccaggggtc ggaactgaaa gtgaagcttt tcacgatgcg attaatccag CD 1151 cagcgggacg gatccccagc ccgctagagc aattttccat tctcccattg CD 1201 attcctatga aaataggaaa cttgtatttc tcattcacaa atTcatcttt CD 1251 gtttatgctg ctaactctca gtttggtcct acttctgctt cattttgtta CD 1301 ctaaaaaggg aggaggaaac tTagtaccaa atgtttggca atccttggta CD 1351 gagcttattt atgatttcgt gctgaacctg gtaaacgaac aaataggtgg CD 1401 tctttccgga aatgtgaaac aaaagttttt cccttgcatc ttggtcactt CD 1451 ttactttttt gttatttTgt aatctccagg gtatgatacc ctatagcttt CD 1501 acagttacaa gtcattttct cattactttg ggtctttcat tttccatttt CD 1551 tattggcatt actatagtgg gatttcaaag aaatgggctt cattttttaa CD 1601 gcttctTatt acctgcagga gtcccgctgc cgttagcacc ttttttagta CD 1651 ctccttgagc taatcTctTa ttgttttcgc gcattaagct Taggaatacg CD 1701 tttatttgct aatatgatgg ccggtcatag ttTagtaaag attttaagtg CD 1751 ggttcgcttg gactatgcta tgtatgaatg atcttttata tttcatagga CD 1801 gatcttggtc ctttatttat agttcttgca ttaaccggtc ttgaattagg CD 1851 tgtagctata ttacaagctT atgtttttac gatcttaatc tgtatttact CD 1901 tgaatgatgc taTaaatctc catTaa SQ SEQUENCE 642 AA; MMTHWKKEIT ALANQIITNV PRPTRRVLFG LGVLFTLFEV GRHGLLFETE IILQALFGIG TAASILFFCN FRTREHFLYT FLLTIYLALF FLKRAFPLLE FAFLAILIFS VCFFPKNGRL RHSLENCSFI FLLLWGSYRL LETPWHEWPL YVCGLLMLFT LLQALVHRKD EGVGKFILPA TFLILMSALV LLGLHSGAIH NLPEKAALTG AAVLIIFSQA AAESTRERWL AIGAYLMCIP CILYILGGAT DWPLFVQQIR LFFFILGLVF GFFWVVTYED VKEQKDLLPI LSAIFSTLAS ARCGPGVWVK EWLGAFSFTI GAYFLFEKVG YRKDTLQETS RTWEAWFCFF AVLSFGVALS FFHASPAPGV GTESEAFHDA INPAAGRIPS PLEQFSILPL IPMKIGNLYF SFTNSSLFML LTLSLVLLLL HFVTKKGGGN LVPNVWQSLV ELIYDFVLNL VNEQIGGLSG NVKQKFFPCI LVTFTFLLFC NLQGMIPYSF TVTSHFLITL GLSFSIFIGI TIVGFQRNGL HFLSFLLPAG VPLPLAPFLV LLELISYCFR ALSLGIRLFA NMMAGHSLVK ILSGFAWTML CMNDLLYFIG DLGPLFIVLA LTGLELGVAI LQAYVFTILI CIYLNDAINL H* // ID AB020062_1 STANDARD; PRT; 101 AA. AC AB020062; DT Tue Jul 21 07:00:01 2009 DE Beta vulgaris mitochondrial nad4L and orf25 genes for NADH OS mitochondrion Beta vulgaris OC Beta vulgaris RN [1] RL Theor. Appl. Genet. 100, 214-220 (2000) FT Full length CDS FT GENE : nad4L FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA94420.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 71 - 373 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 16 S(tCa) -> L(tTa) FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 32 S(tCa) -> L(tTa) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 44 S(tCg) -> L(tTg) FT EDITING : 53 S(tCg) -> L(tTg) FT EDITING : 60 S(tCa) -> L(tTa) FT EDITING : 66 P(cCa) -> L(cTa) FT EDITING : 94 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggattcta tcaaatattt tacattttct atgatcatct ttatttCagg CD 51 tattCggggt attctcctta atagacgaaa tattcttatt atgtCaatgt CD 101 caattgaatC aatgttatta gctgtgaatt Cgaacttttt ggtattttct CD 151 gtttcttCgg atgatatgat gggtcaatCa tttgctttat tggttcCaac CD 201 ggtggcagct gcggaatctg ctattgggtt agccattttc gttattactt CD 251 tccgagtccg gggtactatt gctgtagaat Ctattaatag cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggattcta tcaaatattt tacattttct atgatcatct ttatttTagg CD 51 tattTggggt attctcctta atagacgaaa tattcttatt atgtTaatgt CD 101 caattgaatT aatgttatta gctgtgaatt Tgaacttttt ggtattttct CD 151 gtttcttTgg atgatatgat gggtcaatTa tttgctttat tggttcTaac CD 201 ggtggcagct gcggaatctg ctattgggtt agccattttc gttattactt CD 251 tccgagtccg gggtactatt gctgtagaat Ttattaatag cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDSIKYFTFS MIIFILGIWG ILLNRRNILI MLMSIELMLL AVNLNFLVFS VSLDDMMGQL FALLVLTVAA AESAIGLAIF VITFRVRGTI AVEFINSIQG * // ID AB020062_2 STANDARD; PRT; 199 AA. AC AB020062; DT Tue Jul 21 07:00:01 2009 DE Beta vulgaris mitochondrial nad4L and orf25 genes for NADH OS mitochondrion Beta vulgaris OC Beta vulgaris RN [1] RL Theor. Appl. Genet. 100, 214-220 (2000) FT Full length CDS FT GENE : orf25 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA94421.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 540 - 1136 FT DIRECTIONS : positive FT EDITING : 5 S(tCc) -> F(tTc) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 40 R(Cgt) -> C(Tgt) FT EDITING : 72 S(tCg) -> L(tTg) FT EDITING : 76 P(cCc) -> L(cTc) FT EDITING : 83 P(cCt) -> L(cTt) FT EDITING : 84 P(CCg) -> L(TTg) FT EDITING : 128 L(Cta) -> L(Tta) FT EDITING : 132 S(tCa) -> L(tTa) FT EDITING : 136 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 597 NT; CD 1 atgagaaaga gttCcacgaa gatgcaggct agaaagatgc tatttgctgc CD 51 tattctatct atttgtgcat Caagttcgaa gaagatctCa atctataatg CD 101 aagaaatgat agtagctCgt tgttttatag gctttatcat attcagtcgg CD 151 aagagtttag gtaatacttt caaagtgact ctcgacgaga gaatccaggc CD 201 tattcaggaa gaatCgcagc aattccCcaa tcctaacgaa gtagttcCtC CD 251 Cggaatccaa tgaacaacaa cgattactta gggtcagctt gcgaatttgt CD 301 ggaaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaaaacagtg caagctttgt tatgtcgaaa cCtaaatgtt aagtCagcaa CD 401 cacttcCaaa tgccacttct tcccgtcgca cccgtcttca ggatgatcta CD 451 gtcacaggtt ttcacttctc agtgagtgaa agatttgtcc ccgggtctac CD 501 gttgaaagct tctatagtag aactcattcg agaaggcttg gcggtcttaa CD 551 gaatggttcg ggtaggaggt tctcttaaga ataaagaaga caaatag FT EDITED CDNA CD 1 atgagaaaga gttTcacgaa gatgcaggct agaaagatgc tatttgctgc CD 51 tattctatct atttgtgcat Taagttcgaa gaagatctTa atctataatg CD 101 aagaaatgat agtagctTgt tgttttatag gctttatcat attcagtcgg CD 151 aagagtttag gtaatacttt caaagtgact ctcgacgaga gaatccaggc CD 201 tattcaggaa gaatTgcagc aattccTcaa tcctaacgaa gtagttcTtT CD 251 Tggaatccaa tgaacaacaa cgattactta gggtcagctt gcgaatttgt CD 301 ggaaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaaaacagtg caagctttgt tatgtcgaaa cTtaaatgtt aagtTagcaa CD 401 cacttcTaaa tgccacttct tcccgtcgca cccgtcttca ggatgatcta CD 451 gtcacaggtt ttcacttctc agtgagtgaa agatttgtcc ccgggtctac CD 501 gttgaaagct tctatagtag aactcattcg agaaggcttg gcggtcttaa CD 551 gaatggttcg ggtaggaggt tctcttaaga ataaagaaga caaatag SQ SEQUENCE 199 AA; MRKSFTKMQA RKMLFAAILS ICALSSKKIL IYNEEMIVAC CFIGFIIFSR KSLGNTFKVT LDERIQAIQE ELQQFLNPNE VVLLESNEQQ RLLRVSLRIC GTVVESLPMA RCAPKCEKTV QALLCRNLNV KLATLLNATS SRRTRLQDDL VTGFHFSVSE RFVPGSTLKA SIVELIREGL AVLRMVRVGG SLKNKEDK* // ID AB022059_3 STANDARD; PRT; 193 AA. AC AB022059; DT Tue Jul 21 07:00:01 2009 DE Aegilops crassa mitochondrial gene for ORF48, ORF25, CLPP. OS mitochondrion Aegilops crassa OC Aegilops crassa RN [1] RL Unpublished FT Full length CDS FT GENE : orf25 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA82045.1 FT PROTEIN_NAME : ORF25 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 924 - 1502 FT DIRECTIONS : positive FT EDITING : 14 L(Cta) -> L(Tta) FT EDITING : 19 P(Cca) -> S(Tca) FT EDITING : 20 S(tCt) -> F(tTt) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 26 P(Ccg) -> S(Tcg) FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 40 R(Cgt) -> C(Tgt) FT EDITING : 83 P(cCg) -> L(cTg) FT EDITING : 132 S(tCa) -> L(tTa) FT EDITING : 139 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 579 NT; CD 1 atgagatttc tttctacgga tatgaaggat agaaatatgC tatttgctgc CD 51 tattCcatCt atttgtgcat CaagtCcgaa gaagatctCa atctataatg CD 101 aagaaatgat agtagctCgt tgttttatag gctttctcat attcagtcgg CD 151 aagagtttag gtaagacttt caaagaaact ctcgacggga gaatcgagtc CD 201 tattcaggaa gaattgctgc aattcttcaa tcctaacgaa gtaattcCgg CD 251 aggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgc CD 301 agcaccgtag tagaatcatt accaacggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgta aagtCagcaa CD 401 cacttctaaa tgccaCttct tcccgccgca tccgtcttca ggacgatata CD 451 gtcacaggtt ttcacttttc agtgagtgaa agatttgtat ccgggtctac CD 501 gttcaaagct tctaccatag acctaattcg agaaggcttg atagtcctaa CD 551 gaaaggtgag ggtggggggt tctatttag FT EDITED CDNA CD 1 atgagatttc tttctacgga tatgaaggat agaaatatgT tatttgctgc CD 51 tattTcatTt atttgtgcat TaagtTcgaa gaagatctTa atctataatg CD 101 aagaaatgat agtagctTgt tgttttatag gctttctcat attcagtcgg CD 151 aagagtttag gtaagacttt caaagaaact ctcgacggga gaatcgagtc CD 201 tattcaggaa gaattgctgc aattcttcaa tcctaacgaa gtaattcTgg CD 251 aggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgc CD 301 agcaccgtag tagaatcatt accaacggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgta aagtTagcaa CD 401 cacttctaaa tgccaTttct tcccgccgca tccgtcttca ggacgatata CD 451 gtcacaggtt ttcacttttc agtgagtgaa agatttgtat ccgggtctac CD 501 gttcaaagct tctaccatag acctaattcg agaaggcttg atagtcctaa CD 551 gaaaggtgag ggtggggggt tctatttag SQ SEQUENCE 193 AA; MRFLSTDMKD RNMLFAAISF ICALSSKKIL IYNEEMIVAC CFIGFLIFSR KSLGKTFKET LDGRIESIQE ELLQFFNPNE VILEESNEQQ RLLRISLRIC STVVESLPTA RCAPKCEKTV QALLCRNLNV KLATLLNAIS SRRIRLQDDI VTGFHFSVSE RFVSGSTFKA STIDLIREGL IVLRKVRVGG SI* // ID AB022060_1 STANDARD; PRT; 193 AA. AC AB022060; DT Tue Jul 21 07:00:01 2009 DE Triticum aestivum mitochondrial gene for ORF25, complete cds. OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Unpublished FT Full length CDS FT GENE : orf25 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA82046.1 FT PROTEIN_NAME : ORF25 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1425 - 2003 FT DIRECTIONS : positive FT EDITING : 14 L(Cta) -> L(Tta) FT EDITING : 19 P(Cca) -> S(Tca) FT EDITING : 20 S(tCt) -> F(tTt) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 26 P(Ccg) -> S(Tcg) FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 40 R(Cgt) -> C(Tgt) FT EDITING : 83 P(cCg) -> L(cTg) FT EDITING : 132 S(tCa) -> L(tTa) FT EDITING : 139 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 579 NT; CD 1 atgagatttc tttctacgga tatgaaggat agaaatatgC tatttgctgc CD 51 tattCcatCt atttgtgcat CaagtCcgaa gaagatctCa atctataatg CD 101 aagaaatgat agtagctCgt tgttttatag gctttctcat attcagtcgg CD 151 aagagtttag gtaagacttt caaagaaact ctcgacggga gaatcgagtc CD 201 tattcaggaa gaattgctgc aattcttcaa tcctaacgaa gtaattcCgg CD 251 aggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgc CD 301 agcaccgtag tagaatcatt accaacggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgta aagtCagcaa CD 401 cacttctaaa tgccaCttct tcccgccgca tccgtcttca ggacgatata CD 451 gtcacaggtt ttcacttttc agtgagtgaa agatttgtat ccgggtctac CD 501 gttcaaagct tctaccatag acctaattcg agaaggcttg atagtcctaa CD 551 gaaaggtgag ggtggggggt tctatttag FT EDITED CDNA CD 1 atgagatttc tttctacgga tatgaaggat agaaatatgT tatttgctgc CD 51 tattTcatTt atttgtgcat TaagtTcgaa gaagatctTa atctataatg CD 101 aagaaatgat agtagctTgt tgttttatag gctttctcat attcagtcgg CD 151 aagagtttag gtaagacttt caaagaaact ctcgacggga gaatcgagtc CD 201 tattcaggaa gaattgctgc aattcttcaa tcctaacgaa gtaattcTgg CD 251 aggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgc CD 301 agcaccgtag tagaatcatt accaacggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgta aagtTagcaa CD 401 cacttctaaa tgccaTttct tcccgccgca tccgtcttca ggacgatata CD 451 gtcacaggtt ttcacttttc agtgagtgaa agatttgtat ccgggtctac CD 501 gttcaaagct tctaccatag acctaattcg agaaggcttg atagtcctaa CD 551 gaaaggtgag ggtggggggt tctatttag SQ SEQUENCE 193 AA; MRFLSTDMKD RNMLFAAISF ICALSSKKIL IYNEEMIVAC CFIGFLIFSR KSLGKTFKET LDGRIESIQE ELLQFFNPNE VILEESNEQQ RLLRISLRIC STVVESLPTA RCAPKCEKTV QALLCRNLNV KLATLLNAIS SRRIRLQDDI VTGFHFSVSE RFVSGSTFKA STIDLIREGL IVLRKVRVGG SI* // ID AB078009_3 STANDARD; PRT; 101 AA. AC AB078009; DT Tue Jul 21 07:00:05 2009 DE Physcomitrella patens chloroplast genes for photosystem I P700 OS chloroplast Physcomitrella patens OC Physcomitrella patens RN [1] RL Biochim. Biophys. Acta 1576 (3), 346-349 (2002) RL PUBMED 12084583 FT Full length CDS FT GENE : rps14 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC05490.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 4674 - 4976 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggcaaaaa aaagtcttat tgaaagagaa aaaaaaagac aaaaattaga CD 51 aaaaaaatat caagattttc gtcactctat aaaaaaaaaa attaaggaaa CD 101 cttcatcctt agatgaaaaa tgggaatttc aaaaacaatt acaagcttta CD 151 ccacgtaata gcgcacctac aagacttcat cgtcgttgtt ttttaaccgg CD 201 aagacctaga gcaaattatc gtgattttgg cttatctagg catgtattac CD 251 gagaaatggc tcatgcatgt tttttacctg gagtaactaa atctagttgg CD 301 taa FT EDITED CDNA CD 1 aTggcaaaaa aaagtcttat tgaaagagaa aaaaaaagac aaaaattaga CD 51 aaaaaaatat caagattttc gtcactctat aaaaaaaaaa attaaggaaa CD 101 cttcatcctt agatgaaaaa tgggaatttc aaaaacaatt acaagcttta CD 151 ccacgtaata gcgcacctac aagacttcat cgtcgttgtt ttttaaccgg CD 201 aagacctaga gcaaattatc gtgattttgg cttatctagg catgtattac CD 251 gagaaatggc tcatgcatgt tttttacctg gagtaactaa atctagttgg CD 301 taa SQ SEQUENCE 101 AA; MAKKSLIERE KKRQKLEKKY QDFRHSIKKK IKETSSLDEK WEFQKQLQAL PRNSAPTRLH RRCFLTGRPR ANYRDFGLSR HVLREMAHAC FLPGVTKSSW * // ID AB086179_2 STANDARD; PRT; 35 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbM FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55324.1 FT PROTEIN_NAME : photosystem II M-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 832 - 936 FT DIRECTIONS : positive FT EDITING : 23 P(cCt) -> L(cTt) FT EDITING : 25 F(Ttt) -> L(Ctt) FT CODON_START : 1 CL CDNALEN 105 NT; CD 1 atggaagtaa atattcttgc ctttattgct actgcactct tcattttaat CD 51 ccctactgct tttctacCta ttTtttatgt acaaacagct agtcaaggca CD 101 gttag FT EDITED CDNA CD 1 atggaagtaa atattcttgc ctttattgct actgcactct tcattttaat CD 51 ccctactgct tttctacTta ttCtttatgt acaaacagct agtcaaggca CD 101 gttag SQ SEQUENCE 35 AA; MEVNILAFIA TALFILIPTA FLLILYVQTA SQGS* // ID AB086179_4 STANDARD; PRT; 1072 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpoB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55326.1 FT PROTEIN_NAME : RNA polymerase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3486 - 6701 FT DIRECTIONS : positive FT EDITING : 46 *(Tag) -> Q(Cag) FT EDITING : 80 S(tCa) -> L(tTa) FT EDITING : 150 T(aCt) -> I(aTt) FT EDITING : 152 P(Cca) -> S(Tca) FT EDITING : 259 P(cCa) -> L(cTa) FT EDITING : 294 S(tCa) -> L(tTa) FT EDITING : 326 S(tCa) -> L(tTa) FT EDITING : 392 W(Tgg) -> R(Cgg) FT EDITING : 397 S(tCa) -> L(tTa) FT EDITING : 414 T(aCt) -> I(aTt) FT EDITING : 418 Y(Tat) -> H(Cat) FT EDITING : 421 *(Tga) -> R(Cga) FT EDITING : 423 R(Cgt) -> C(Tgt) FT EDITING : 522 S(tCa) -> L(tTa) FT EDITING : 531 S(tCg) -> L(tTg) FT EDITING : 534 L(Ctt) -> F(Ttt) FT EDITING : 542 C(Tgt) -> R(Cgt) FT EDITING : 551 C(Tgt) -> R(Cgt) FT EDITING : 574 P(cCa) -> L(cTa) FT EDITING : 650 S(tCa) -> L(tTa) FT EDITING : 652 S(tCa) -> L(tTa) FT EDITING : 668 S(tCt) -> F(tTt) FT EDITING : 719 C(Tgt) -> R(Cgt) FT EDITING : 721 S(tCa) -> L(tTa) FT EDITING : 731 F(tTt) -> S(tCt) FT EDITING : 738 A(gCt) -> V(gTt) FT EDITING : 739 S(tCg) -> L(tTg) FT EDITING : 759 S(tCa) -> L(tTa) FT EDITING : 832 P(Ccg) -> S(Tcg) FT EDITING : 842 H(Cat) -> Y(Tat) FT EDITING : 860 L(tTa) -> S(tCa) FT EDITING : 879 P(cCg) -> L(cTg) FT EDITING : 897 L(tTa) -> S(tCa) FT EDITING : 902 S(tCt) -> F(tTt) FT EDITING : 962 C(Tgc) -> R(Cgc) FT EDITING : 969 P(cCt) -> L(cTt) FT EDITING : 973 *(Taa) -> Q(Caa) FT EDITING : 984 *(Taa) -> Q(Caa) FT EDITING : 1007 P(cCt) -> L(cTt) FT EDITING : 1023 V(gTc) -> A(gCc) FT EDITING : 1048 *(Tga) -> R(Cga) FT EDITING : 1052 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 3216 NT; CD 1 atgattttaa ggaaaaaaat agagttgttt gtattacctg aatttacaga CD 51 gatacaattc gaaggatttc atcgctttat taagtatggg ttagttaaag CD 101 aactcaacga tttccctaaa attgaagata cagatTagga atttgaattt CD 151 caacttttta gtaggcagta tcaactggca gaacctccta ttgaggagag CD 201 agatgctata tatcaatcta taacatattc atctgattCa tatgtgccgg CD 251 ctcaactaac tgaaagaaaa aaaggaagag taaaaaaaca aattgtattt CD 301 cttggaagta ttcccctaat gaattcccag ggtacttttg ttgttaatgg CD 351 agttgctaga gtaattataa atcaaattct acgaagtccc ggcatttatt CD 401 ataattcaga attagatcgc aacggaattc ctatatatac tggcactaCt CD 451 attCcagatt ggggaagaag gttgaaacta gaaattgatg gaaaaacaag CD 501 aatctgggct cgtataagca aaaaaagaaa agtatctatt ctagttttat CD 551 tattagctat gggtttggac attgaagaaa tcctaggcaa tgtctgttat CD 601 cccaaattac tcttaggttg tatgaaaagg aagacgaaga aagagcatct CD 651 tcagtcaacg gaagatgcca tagtagaact ttataaacaa atatattgta CD 701 taggcggaga tttaaatttt tctgagtcta taagtaagga gttgcaaaaa CD 751 aaattttttc agcagagatg tgaacCagga aaaataggtc gattaaactt CD 801 aaataagaaa cttaatcttg atgtacctga aaacgaaaat tttttattac CD 851 cacaagatct attagctgcc gtagattatt Caataaaaat tagatttggc CD 901 ataggtgtac ctgacgatat tgatcactta aaaaatcgcc gtgttcgttc CD 951 tgtaactgac ctattgcaag atcaatCaaa attagctttg aatcgtttag CD 1001 agaattcgat acggcaagcc atacgtggag caaatagacg tgaacattta CD 1051 ccaactccca aaagcctagt aacgtcaact ccattaataa caacttttaa CD 1101 agaattcttt ggttcgcatc ctttgtcaca attcctagat caaactaatc CD 1151 cattgacaga agtggttcat aaaTggagac taagttcctC agggccagga CD 1201 ggattaacaa gacgaactgc aagttttcaa gtacgagata Ctcatcctag CD 1251 tTattatggg TgaattCgtc ccattgaaac atctgaagga atgaatgccg CD 1301 gacttgttgc atcactagcc attcatgcca aagttgataa ttggggatct CD 1351 ttggagagtc cattctataa aatatctgga gtatctgaag aagaagatat CD 1401 gactttttta tcagcaggag aagatgaaaa ctatcacata gcaacgggaa CD 1451 attgtttagc cttgaatcaa acaaatcaag aggaacaagt aactccagct CD 1501 cgatatcgac aagaatttgt cgccactgca tggaatcaaa taaaccttcg CD 1551 aagtattttt ccttCacaat atttttctat tggaacttcc tCgattcctC CD 1601 ttcttgaaca taatgatgca aatTgtgctt taatgggttt taatatgcag CD 1651 Tgtcaagctg ttccactttc caaacctgag aagtgcattg tagggacagg CD 1701 attggaaagc caaacagctc Cagattcagg aagtgtaatt gtagccacag CD 1751 aaggaggaag aattagttat accgatggta gaagaattac attattgacg CD 1801 aaggagaaag aggtagaaac aaaattggta atatatcaac gttccaataa CD 1851 tagtacttgt atacatgaga aaccccgaat tcagttgaga gaatacgtaa CD 1901 aaaagggaca aattctagcg gatgggagag ctactgcagg aggagaatCa CD 1951 gcttCaggaa aaaatatatt agtagcttat atgccatggg agggatataa CD 2001 ttCtgaagat gctatactta ttagtgaacg tctgatacat gaagatattt CD 2051 atacttctat tcatattgag aggtatgaaa ttgaagctcg cgtaacaagt CD 2101 cagggtcccg aaagaattac tagagaaata cctcatttag ataattattt CD 2151 acttTgtcat tCagatgaaa gtggtcttgt attaccagga tTttgggtag CD 2201 aaacaggaga tgCttCggtt ggtaaattga cacctcagga aacagaagaa CD 2251 tcactacgtg ctccagaagg taaatCatta caagctatat ttgggattca CD 2301 agtagttaca gcaaaagaga cttgtcttaa agtaccttta ggcggaagag CD 2351 gccgagtcat cgatataaaa tggatctatc aggaaaaaac ttcgacaact CD 2401 tatgcagaaa ttgtccatgt atatatcctg caaaagcgcg aaatacaagt CD 2451 aggtgataaa gtagctggaa gacatggaaa taagggtatt attCcgaaaa CD 2501 tattgcctag acaggatatg cctCatttac aagatggaac acctgttgat CD 2551 atggttctaa gtcccttagg tgtaccttTa aggatgaatg tgggacaaat CD 2601 atttgaatgt ttacttggtt tagcagggga cttccCgcaa aagcattata CD 2651 gagtaacacc tttcgatgaa agatatgaga gggaagcttT aagaaagcta CD 2701 gtttCttctg aattgcatga ggctagtaga caaactgcta atccatggtt CD 2751 atttgaatct gataatcctg gaaaaagcgg attacttgat ggaagaacgg CD 2801 gagacatttt tgaagaacct gtcactatag gaaaggctta tatgttgaaa CD 2851 ttgatccatc aagttgatga taaaattcat gcaTgctcta gtggacctta CD 2901 tgcacCtgtg acgcaaTaac ctcttagagg aaaatctcgg cgggggggaT CD 2951 aacgagtagg agaaatggaa gtttgggctt tggaaggttt cggtgccgct CD 3001 tataccttag aagaaatgcC tactataaag tctgatcata ttcaggcccg CD 3051 ttttgaggta cttagggTca ttgtaactgg agaattgata cccaaacctg CD 3101 aaacagctcc agaatctttt cgattattgg ttcgagaatt gTgatctcta CD 3151 gctcCaaatt tagatcatat tattgtatct gaaaaagaat taagaataaa CD 3201 atttaaagac atttaa FT EDITED CDNA CD 1 atgattttaa ggaaaaaaat agagttgttt gtattacctg aatttacaga CD 51 gatacaattc gaaggatttc atcgctttat taagtatggg ttagttaaag CD 101 aactcaacga tttccctaaa attgaagata cagatCagga atttgaattt CD 151 caacttttta gtaggcagta tcaactggca gaacctccta ttgaggagag CD 201 agatgctata tatcaatcta taacatattc atctgattTa tatgtgccgg CD 251 ctcaactaac tgaaagaaaa aaaggaagag taaaaaaaca aattgtattt CD 301 cttggaagta ttcccctaat gaattcccag ggtacttttg ttgttaatgg CD 351 agttgctaga gtaattataa atcaaattct acgaagtccc ggcatttatt CD 401 ataattcaga attagatcgc aacggaattc ctatatatac tggcactaTt CD 451 attTcagatt ggggaagaag gttgaaacta gaaattgatg gaaaaacaag CD 501 aatctgggct cgtataagca aaaaaagaaa agtatctatt ctagttttat CD 551 tattagctat gggtttggac attgaagaaa tcctaggcaa tgtctgttat CD 601 cccaaattac tcttaggttg tatgaaaagg aagacgaaga aagagcatct CD 651 tcagtcaacg gaagatgcca tagtagaact ttataaacaa atatattgta CD 701 taggcggaga tttaaatttt tctgagtcta taagtaagga gttgcaaaaa CD 751 aaattttttc agcagagatg tgaacTagga aaaataggtc gattaaactt CD 801 aaataagaaa cttaatcttg atgtacctga aaacgaaaat tttttattac CD 851 cacaagatct attagctgcc gtagattatt Taataaaaat tagatttggc CD 901 ataggtgtac ctgacgatat tgatcactta aaaaatcgcc gtgttcgttc CD 951 tgtaactgac ctattgcaag atcaatTaaa attagctttg aatcgtttag CD 1001 agaattcgat acggcaagcc atacgtggag caaatagacg tgaacattta CD 1051 ccaactccca aaagcctagt aacgtcaact ccattaataa caacttttaa CD 1101 agaattcttt ggttcgcatc ctttgtcaca attcctagat caaactaatc CD 1151 cattgacaga agtggttcat aaaCggagac taagttcctT agggccagga CD 1201 ggattaacaa gacgaactgc aagttttcaa gtacgagata Ttcatcctag CD 1251 tCattatggg CgaattTgtc ccattgaaac atctgaagga atgaatgccg CD 1301 gacttgttgc atcactagcc attcatgcca aagttgataa ttggggatct CD 1351 ttggagagtc cattctataa aatatctgga gtatctgaag aagaagatat CD 1401 gactttttta tcagcaggag aagatgaaaa ctatcacata gcaacgggaa CD 1451 attgtttagc cttgaatcaa acaaatcaag aggaacaagt aactccagct CD 1501 cgatatcgac aagaatttgt cgccactgca tggaatcaaa taaaccttcg CD 1551 aagtattttt ccttTacaat atttttctat tggaacttcc tTgattcctT CD 1601 ttcttgaaca taatgatgca aatCgtgctt taatgggttt taatatgcag CD 1651 Cgtcaagctg ttccactttc caaacctgag aagtgcattg tagggacagg CD 1701 attggaaagc caaacagctc Tagattcagg aagtgtaatt gtagccacag CD 1751 aaggaggaag aattagttat accgatggta gaagaattac attattgacg CD 1801 aaggagaaag aggtagaaac aaaattggta atatatcaac gttccaataa CD 1851 tagtacttgt atacatgaga aaccccgaat tcagttgaga gaatacgtaa CD 1901 aaaagggaca aattctagcg gatgggagag ctactgcagg aggagaatTa CD 1951 gcttTaggaa aaaatatatt agtagcttat atgccatggg agggatataa CD 2001 ttTtgaagat gctatactta ttagtgaacg tctgatacat gaagatattt CD 2051 atacttctat tcatattgag aggtatgaaa ttgaagctcg cgtaacaagt CD 2101 cagggtcccg aaagaattac tagagaaata cctcatttag ataattattt CD 2151 acttCgtcat tTagatgaaa gtggtcttgt attaccagga tCttgggtag CD 2201 aaacaggaga tgTttTggtt ggtaaattga cacctcagga aacagaagaa CD 2251 tcactacgtg ctccagaagg taaatTatta caagctatat ttgggattca CD 2301 agtagttaca gcaaaagaga cttgtcttaa agtaccttta ggcggaagag CD 2351 gccgagtcat cgatataaaa tggatctatc aggaaaaaac ttcgacaact CD 2401 tatgcagaaa ttgtccatgt atatatcctg caaaagcgcg aaatacaagt CD 2451 aggtgataaa gtagctggaa gacatggaaa taagggtatt attTcgaaaa CD 2501 tattgcctag acaggatatg cctTatttac aagatggaac acctgttgat CD 2551 atggttctaa gtcccttagg tgtaccttCa aggatgaatg tgggacaaat CD 2601 atttgaatgt ttacttggtt tagcagggga cttccTgcaa aagcattata CD 2651 gagtaacacc tttcgatgaa agatatgaga gggaagcttC aagaaagcta CD 2701 gtttTttctg aattgcatga ggctagtaga caaactgcta atccatggtt CD 2751 atttgaatct gataatcctg gaaaaagcgg attacttgat ggaagaacgg CD 2801 gagacatttt tgaagaacct gtcactatag gaaaggctta tatgttgaaa CD 2851 ttgatccatc aagttgatga taaaattcat gcaCgctcta gtggacctta CD 2901 tgcacTtgtg acgcaaCaac ctcttagagg aaaatctcgg cgggggggaC CD 2951 aacgagtagg agaaatggaa gtttgggctt tggaaggttt cggtgccgct CD 3001 tataccttag aagaaatgcT tactataaag tctgatcata ttcaggcccg CD 3051 ttttgaggta cttagggCca ttgtaactgg agaattgata cccaaacctg CD 3101 aaacagctcc agaatctttt cgattattgg ttcgagaatt gCgatctcta CD 3151 gctcTaaatt tagatcatat tattgtatct gaaaaagaat taagaataaa CD 3201 atttaaagac atttaa SQ SEQUENCE 1072 AA; MILRKKIELF VLPEFTEIQF EGFHRFIKYG LVKELNDFPK IEDTDQEFEF QLFSRQYQLA EPPIEERDAI YQSITYSSDL YVPAQLTERK KGRVKKQIVF LGSIPLMNSQ GTFVVNGVAR VIINQILRSP GIYYNSELDR NGIPIYTGTI ISDWGRRLKL EIDGKTRIWA RISKKRKVSI LVLLLAMGLD IEEILGNVCY PKLLLGCMKR KTKKEHLQST EDAIVELYKQ IYCIGGDLNF SESISKELQK KFFQQRCELG KIGRLNLNKK LNLDVPENEN FLLPQDLLAA VDYLIKIRFG IGVPDDIDHL KNRRVRSVTD LLQDQLKLAL NRLENSIRQA IRGANRREHL PTPKSLVTST PLITTFKEFF GSHPLSQFLD QTNPLTEVVH KRRLSSLGPG GLTRRTASFQ VRDIHPSHYG RICPIETSEG MNAGLVASLA IHAKVDNWGS LESPFYKISG VSEEEDMTFL SAGEDENYHI ATGNCLALNQ TNQEEQVTPA RYRQEFVATA WNQINLRSIF PLQYFSIGTS LIPFLEHNDA NRALMGFNMQ RQAVPLSKPE KCIVGTGLES QTALDSGSVI VATEGGRISY TDGRRITLLT KEKEVETKLV IYQRSNNSTC IHEKPRIQLR EYVKKGQILA DGRATAGGEL ALGKNILVAY MPWEGYNFED AILISERLIH EDIYTSIHIE RYEIEARVTS QGPERITREI PHLDNYLLRH LDESGLVLPG SWVETGDVLV GKLTPQETEE SLRAPEGKLL QAIFGIQVVT AKETCLKVPL GGRGRVIDIK WIYQEKTSTT YAEIVHVYIL QKREIQVGDK VAGRHGNKGI ISKILPRQDM PYLQDGTPVD MVLSPLGVPS RMNVGQIFEC LLGLAGDFLQ KHYRVTPFDE RYEREASRKL VFSELHEASR QTANPWLFES DNPGKSGLLD GRTGDIFEEP VTIGKAYMLK LIHQVDDKIH ARSSGPYALV TQQPLRGKSR RGGQRVGEME VWALEGFGAA YTLEEMLTIK SDHIQARFEV LRAIVTGELI PKPETAPESF RLLVRELRSL ALNLDHIIVS EKELRIKFKD I* // ID AB086179_5 STANDARD; PRT; 682 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpoC1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55327.1 FT PROTEIN_NAME : RNA polymerase beta' subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 145/0 FT EDITING : 43 S(tCg) -> L(tTg) FT EDITING : 56 S(tCt) -> F(tTt) FT EDITING : 87 R(Cgt) -> C(Tgt) FT EDITING : 123 L(cTt) -> P(cCt) FT EDITING : 238 *(Taa) -> Q(Caa) FT EDITING : 270 L(cTg) -> P(cCg) FT EDITING : 273 L(cTt) -> P(cCt) FT EDITING : 290 F(tTc) -> S(tCc) FT EDITING : 296 H(Cat) -> Y(Tat) FT EDITING : 335 P(cCt) -> L(cTt) FT EDITING : 341 C(Tgt) -> R(Cgt) FT EDITING : 343 *(Taa) -> Q(Caa) FT EDITING : 344 L(cTt) -> P(cCt) FT EDITING : 355 L(tTg) -> S(tCg) FT EDITING : 368 C(Tgc) -> R(Cgc) FT EDITING : 375 *(Tga) -> R(Cga) FT EDITING : 384 T(aCt) -> I(aTt) FT EDITING : 390 P(cCt) -> L(cTt) FT EDITING : 398 L(cTc) -> P(cCc) FT EDITING : 406 S(tCt) -> F(tTt) FT EDITING : 435 S(Tct) -> P(Cct) FT EDITING : 457 I(aTt) -> T(aCt) FT EDITING : 466 S(tCt) -> F(tTt) FT EDITING : 477 C(Tgt) -> R(Cgt) FT EDITING : 481 S(tCa) -> L(tTa) FT EDITING : 486 S(tCt) -> F(tTt) FT EDITING : 494 *(Taa) -> Q(Caa) FT EDITING : 512 S(tCa) -> L(tTa) FT EDITING : 523 A(gCt) -> V(gTt) FT EDITING : 548 *(Tga) -> R(Cga) FT EDITING : 653 P(cCt) -> L(cTt) FT EDITING : 654 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 2046 NT; CD 1 atgatttacc aagaggagaa tcagcatctt cgaattggat tagcttcccc CD 51 tgaagaaatc cgtggttggg ctgagagaac cttacctaat ggagaagtag CD 101 ttggacgaat aactgaacct tatacttCgc attataaaac gcataaacca CD 151 gagaaagatg gcttatCttg tgaaagaata tttggaccta taaaaagtgg CD 201 aatttgtgct tgtggaaagt accggagtat tgaaaatcag agagaatatt CD 251 caaaaattCg tgagcaatgt ggcgttgaat ttactgaatc tagagttcgt CD 301 agatatagaa tgggatatat agaattggca tgtccagtaa ctcatgtatg CD 351 gtatttgaag cgtcttcTta gttatatcgc aaatcttttg gctaaacctc CD 401 taaaagaatt ggaaagccta gtatactgcg atctttttct cgctaggcca CD 451 atagctaaaa aacctacttt attaaaatta cgaggtttat tcaaatacga CD 501 agatcaatct tggaaggaaa tttttcctcg tttcttttct cctcgtggat CD 551 tcgaagcttt tcaagataga gaagtagcta ctggaggaaa tgctattgaa CD 601 aaaggattag ctagtctgaa tttgcaaatt gttatggatc gtgcatatat CD 651 ggaatggaga aatttgacgg aacaaaaatc taccggaaac gagtgggagg CD 701 atcgtaagat tTaaagaaga aaagatcttt tagttagacg catggaatta CD 751 gccaaaaact ttctccaaac aaatatgaaa ccggaatgga tggttttatc CD 801 attattacTg gttcttcTtc ctgaattaag accaatgatt gaattaggag CD 851 aaggtgaatt aattacttTc gatttaaatg aacttCatag aagagttatt CD 901 tatagaaata atacacttct ggatttttta gccagaggta gatctacacc CD 951 aggaggtttg gttgtttgcc aaaaaagatt ggttcaagaa gctgtggatg CD 1001 cgcCtattga taatggtatt TgtggaTaac Ttatgagaga tagtcataat CD 1051 agagcttata aatTgttttc tgatttaatt gaaggtaaag aaggaagatt CD 1101 tTgcgaaaat ttacttggaa aaTgagttga ttattcaggt cgttccgtta CD 1151 Ctgttgcggg tccctatcCt cccttacatg aatgtggatt gcTcaaagaa CD 1201 atggcagtag agctttCtca agcttttgta attcgaggtt tgattggaag CD 1251 atatctggct ccaaatctcc gagctgctaa aagtatgatt caagacaaag CD 1301 agTctattat atggaagata cttaaagaag ttatacaggg acatccggta CD 1351 ctactaaatc gagcacctaT tttgcataga ttgggaatac aagcatCtga CD 1401 acctattcta gtagagggac gtgctattTg tttacaccct tCagtttgtg CD 1451 caggatCtaa cgcagacttt gatggagatT aaatggctgt ccatatacca CD 1501 ctatctctgg aagcccaagt agaggctcgt ctatCaatgt tttctcatac CD 1551 aaatcttttg tctccagCta caggaaatcc cgtttctgta ccgagtcaag CD 1601 atatgcttct tggaatttat gtatcaacta tcagaagcaa cTgaggcatt CD 1651 tatcaaaatc aatatcatcc gtatgattat agaaataaaa atttttctta CD 1701 taaaatgttt tactttcata gttacgatga tatacttaaa gctgagaaac CD 1751 agaaacaaat aaatttacat agtcctttat ggcttcgatg gcaggtagat CD 1801 ctacatatag tcacttcaat tgatagagaa gtacctattg aaattcaata CD 1851 tgaatctctc ggaacttctt cccagattta tgaaaattac caatttagga CD 1901 agaatagaaa agaaaaaata cttagtatgt acatttgtac aactgctggt CD 1951 cgtattcCtt Ccaatcaaca aatagaagaa gctatacaag gtttttttga CD 2001 agtttctcaa cataggagtc gaccactacc cgctataata gcgtaa FT EDITED CDNA CD 1 atgatttacc aagaggagaa tcagcatctt cgaattggat tagcttcccc CD 51 tgaagaaatc cgtggttggg ctgagagaac cttacctaat ggagaagtag CD 101 ttggacgaat aactgaacct tatacttTgc attataaaac gcataaacca CD 151 gagaaagatg gcttatTttg tgaaagaata tttggaccta taaaaagtgg CD 201 aatttgtgct tgtggaaagt accggagtat tgaaaatcag agagaatatt CD 251 caaaaattTg tgagcaatgt ggcgttgaat ttactgaatc tagagttcgt CD 301 agatatagaa tgggatatat agaattggca tgtccagtaa ctcatgtatg CD 351 gtatttgaag cgtcttcCta gttatatcgc aaatcttttg gctaaacctc CD 401 taaaagaatt ggaaagccta gtatactgcg atctttttct cgctaggcca CD 451 atagctaaaa aacctacttt attaaaatta cgaggtttat tcaaatacga CD 501 agatcaatct tggaaggaaa tttttcctcg tttcttttct cctcgtggat CD 551 tcgaagcttt tcaagataga gaagtagcta ctggaggaaa tgctattgaa CD 601 aaaggattag ctagtctgaa tttgcaaatt gttatggatc gtgcatatat CD 651 ggaatggaga aatttgacgg aacaaaaatc taccggaaac gagtgggagg CD 701 atcgtaagat tCaaagaaga aaagatcttt tagttagacg catggaatta CD 751 gccaaaaact ttctccaaac aaatatgaaa ccggaatgga tggttttatc CD 801 attattacCg gttcttcCtc ctgaattaag accaatgatt gaattaggag CD 851 aaggtgaatt aattacttCc gatttaaatg aacttTatag aagagttatt CD 901 tatagaaata atacacttct ggatttttta gccagaggta gatctacacc CD 951 aggaggtttg gttgtttgcc aaaaaagatt ggttcaagaa gctgtggatg CD 1001 cgcTtattga taatggtatt CgtggaCaac Ctatgagaga tagtcataat CD 1051 agagcttata aatCgttttc tgatttaatt gaaggtaaag aaggaagatt CD 1101 tCgcgaaaat ttacttggaa aaCgagttga ttattcaggt cgttccgtta CD 1151 Ttgttgcggg tccctatcTt cccttacatg aatgtggatt gcCcaaagaa CD 1201 atggcagtag agctttTtca agcttttgta attcgaggtt tgattggaag CD 1251 atatctggct ccaaatctcc gagctgctaa aagtatgatt caagacaaag CD 1301 agCctattat atggaagata cttaaagaag ttatacaggg acatccggta CD 1351 ctactaaatc gagcacctaC tttgcataga ttgggaatac aagcatTtga CD 1401 acctattcta gtagagggac gtgctattCg tttacaccct tTagtttgtg CD 1451 caggatTtaa cgcagacttt gatggagatC aaatggctgt ccatatacca CD 1501 ctatctctgg aagcccaagt agaggctcgt ctatTaatgt tttctcatac CD 1551 aaatcttttg tctccagTta caggaaatcc cgtttctgta ccgagtcaag CD 1601 atatgcttct tggaatttat gtatcaacta tcagaagcaa cCgaggcatt CD 1651 tatcaaaatc aatatcatcc gtatgattat agaaataaaa atttttctta CD 1701 taaaatgttt tactttcata gttacgatga tatacttaaa gctgagaaac CD 1751 agaaacaaat aaatttacat agtcctttat ggcttcgatg gcaggtagat CD 1801 ctacatatag tcacttcaat tgatagagaa gtacctattg aaattcaata CD 1851 tgaatctctc ggaacttctt cccagattta tgaaaattac caatttagga CD 1901 agaatagaaa agaaaaaata cttagtatgt acatttgtac aactgctggt CD 1951 cgtattcTtt Tcaatcaaca aatagaagaa gctatacaag gtttttttga CD 2001 agtttctcaa cataggagtc gaccactacc cgctataata gcgtaa SQ SEQUENCE 682 AA; MIYQEENQHL RIGLASPEEI RGWAERTLPN GEVVGRITEP YTLHYKTHKP EKDGLFCERI FGPIKSGICA CGKYRSIENQ REYSKICEQC GVEFTESRVR RYRMGYIELA CPVTHVWYLK RLPSYIANLL AKPLKELESL VYCDLFLARP IAKKPTLLKL RGLFKYEDQS WKEIFPRFFS PRGFEAFQDR EVATGGNAIE KGLASLNLQI VMDRAYMEWR NLTEQKSTGN EWEDRKIQRR KDLLVRRMEL AKNFLQTNMK PEWMVLSLLP VLPPELRPMI ELGEGELITS DLNELYRRVI YRNNTLLDFL ARGRSTPGGL VVCQKRLVQE AVDALIDNGI RGQPMRDSHN RAYKSFSDLI EGKEGRFREN LLGKRVDYSG RSVIVAGPYL PLHECGLPKE MAVELFQAFV IRGLIGRYLA PNLRAAKSMI QDKEPIIWKI LKEVIQGHPV LLNRAPTLHR LGIQAFEPIL VEGRAIRLHP LVCAGFNADF DGDQMAVHIP LSLEAQVEAR LLMFSHTNLL SPVTGNPVSV PSQDMLLGIY VSTIRSNRGI YQNQYHPYDY RNKNFSYKMF YFHSYDDILK AEKQKQINLH SPLWLRWQVD LHIVTSIDRE VPIEIQYESL GTSSQIYENY QFRKNRKEKI LSMYICTTAG RILFNQQIEE AIQGFFEVSQ HRSRPLPAII A* // ID AB086179_6 STANDARD; PRT; 1446 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpoC2 FT NOTE : GTG start codon FT LOCUS_TAG : FT PROTEIN_ID : BAC55328.1 FT PROTEIN_NAME : RNA polymerase beta'' subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 9600 - 13937 FT DIRECTIONS : positive FT EDITING : 9 F(ttC) -> F(ttT) FT EDITING : 42 P(cCt) -> L(cTt) FT EDITING : 48 *(Taa) -> Q(Caa) FT EDITING : 66 L(cTg) -> P(cCg) FT EDITING : 94 A(gCg) -> V(gTg) FT EDITING : 111 S(tCa) -> L(tTa) FT EDITING : 113 *(Taa) -> Q(Caa) FT EDITING : 137 *(Tga) -> R(Cga) FT EDITING : 142 *(Taa) -> Q(Caa) FT EDITING : 144 Y(Tat) -> H(Cat) FT EDITING : 156 F(TTt) -> P(CCt) FT EDITING : 157 *(Tag) -> Q(Cag) FT EDITING : 195 *(Tga) -> R(Cga) FT EDITING : 197 L(tTa) -> S(tCa) FT EDITING : 204 C(Tgc) -> R(Cgc) FT EDITING : 224 *(Tga) -> R(Cga) FT EDITING : 277 S(tCa) -> L(tTa) FT EDITING : 327 *(Taa) -> Q(Caa) FT EDITING : 328 F(tTt) -> S(tCt) FT EDITING : 341 S(tCc) -> F(tTc) FT EDITING : 347 S(tCc) -> F(tTc) FT EDITING : 356 *(Tga) -> R(Cga) FT EDITING : 432 S(Tct) -> P(Cct) FT EDITING : 608 S(tCt) -> F(tTt) FT EDITING : 613 D(gaT) -> D(gaC) FT EDITING : 621 S(Tca) -> P(Cca) FT EDITING : 632 N(aaT) -> N(aaC) FT EDITING : 665 L(cTc) -> P(cCc) FT EDITING : 673 S(tCa) -> L(tTa) FT EDITING : 679 S(Tct) -> P(Cct) FT EDITING : 686 S(agT) -> S(agC) FT EDITING : 723 G(ggT) -> G(ggC) FT EDITING : 726 Y(taT) -> Y(taC) FT EDITING : 794 P(cCa) -> L(cTa) FT EDITING : 831 *(Taa) -> Q(Caa) FT EDITING : 922 *(Taa) -> Q(Caa) FT EDITING : 1179 S(tCa) -> L(tTa) FT EDITING : 1201 *(Taa) -> Q(Caa) FT EDITING : 1206 C(Tgt) -> R(Cgt) FT EDITING : 1259 H(Cat) -> Y(Tat) FT EDITING : 1260 *(Tag) -> Q(Cag) FT EDITING : 1293 S(tCt) -> F(tTt) FT EDITING : 1311 S(tCa) -> L(tTa) FT EDITING : 1340 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 4338 NT; CD 1 gtggcagaat cagctaaatt gctattCtat aataaagtaa tagatggaac CD 51 tgccataaaa caatttattg gcagattagt agctcacttt ggaattacat CD 101 atacagctca cattttggat caacCtaaaa ctctgggttt tTaacaagct CD 151 acttatgccg ctacttcatt aggcattgac gatctcttaa cagcacTgtc CD 201 aaagggatgg ctcattcaag atgcggaaca tcatagttat actttggaga CD 251 agcatcatcg ctatgggaat gtacatgctg Cggaaaaatt acgtcaactc CD 301 attgaaacat ggtatgctac gagtgagtat tCaaaaTaag aaatgaatcc CD 351 taatttcaga atgactgatc ccttaaatcc ggtacatatg atgtcttttt CD 401 caggagctTg aggaagtgca tcaTaagttT atcaattagt aggtatgaga CD 451 ggattagtgt cagatTTtTa gggacaaatt attgatttac ctattaagag CD 501 taatttccgc gagggattat ctttgaccga atatattatt tcttgttacg CD 551 gtgctcgtaa aggagttgtt gatactgccg tgTgaacatT agatgctgga CD 601 taccttacaT gcagactcgt tgaagtggtt caacatattg tagtacgtaa CD 651 aacagattgt aatacttttT gaggtatttc tttgaattct accgaagata CD 701 agaagaaaaa tttacaaata tttactcagc aaaaactagt gggtcgtgta CD 751 ctagcagata atttatatat aaatgcaaga tgtcttgcta tacgtaatca CD 801 agatattaat actaatctta ttgaaaaatC aataactctt aaaacaccat CD 851 taatttcaat acgatctccc ttgacttgca aaagtatgct ttggatttgt CD 901 caattatgct atggatggag tcttactcac tacggtgatt tagtagaatt CD 951 gggagaagct gtgggtatta tagcaggcTa atTtatcggg gaaccaggaa CD 1001 ctcaactaac attaaggact tCccatacgg gtggagtttC cacaggtgac CD 1051 attgcagaac atgtaTgaac cccttttaat gggactattg aattcgatac CD 1101 agatttagtt tatcccacaa gaacacgtca cggtcacccc gcttgggtat CD 1151 gtcgtaccga tctagctgtt actataaaaa gtcagaataa gatacataat CD 1201 ttgatcatcc catctcaaag tctactctta attcaaaaca atcaatatgt CD 1251 agaatcgaaa caacttattg cggaagttca tgctaaggta tctTctttca CD 1301 aagaaaaggt tcagaaatac atttattgta acatagaagg ggaaatgcac CD 1351 tggagtaaaa gggtacgtca tgcttctaaa tatttacata gtaatgttca CD 1401 tttaatattt aatacgggtc acttatggat attatcagga agttctcatg CD 1451 aagataaaac atcctctatg tttttcaaaa atcaggatca aatcaataca CD 1501 aaatttttca tttctccacg taagatactt tttatgaaaa agactaatca CD 1551 agttaattca aaaaatcttg atccttattt agaaaaagaa atggaaactc CD 1601 taaattattc gaatctctat cttggtatac taaacaagag taggaacttc CD 1651 gtatatccca gtattatttt acatgattat gaggtaaaga gaatttatga CD 1701 tgaaaaaaaa ggcgaaaatt ttcttttatt ggaggaaaga catggagaaa CD 1751 aaaaaacaca aatttttcgt cgatttgttc ttaacatacc aaaaagtgga CD 1801 attttagaaa ataaggatat ttCtgccatt tcaaatgaTc ctggatacgg CD 1851 aattcaaagc Tcaggaatta taaaatatgg tactataaaa gtcaaTccaa CD 1901 ttaaaggaaa aggagaaact tttaagaatc gagaaacgaa aattttaaga CD 1951 cttcgaccga gatatcaagt aattgaacca ggaaattttt ttcTcattcc CD 2001 tgaagaagtg cacatttCat atgaatcttt tccaTctatc ttagtacgaa CD 2051 atgatagTct tataaaaaaa aatacacaaa ttacttcgga tattaggagc CD 2101 caagtaggtg gattagttag aataagaaga aagatgaatg atagttacga CD 2151 ggtaaaagta ttacctggTc gtgtataTca tcccgaagag agacgaaaca CD 2201 tatctaaaca aaatgacatt ttggtaccac cgggagaaga aatttctaat CD 2251 aagtttcaat ctgaaaattg gctttatctt gagtggatta caccccctaa CD 2301 agaaaaacct ttcattttca ttagacctgc aattgaattt atagtacctg CD 2351 aagaaacaga tttagcagaa acgtttactc Caaattcaca aaagaaacaa CD 2401 gaaattttga aagtaaaaaa gattcgatat cttctctacg aagatggtga CD 2451 ggaagttgaa gttacgaata aaactggtat tcaattaatt Taaactggtc CD 2501 tagttctgga ttggaaagaa gattcttcta taaaaaaagt ttatgcttct CD 2551 cttactgaaa tagagacaaa tggattatca aaaaaatttc ttcaaattag CD 2601 cttgatagaa caccctattt ttgagataga aaagaagaag aataatgtca CD 2651 atctaaaata cttattcact aatgaaatta attattctag tcactctttc CD 2701 aattatgaaa atggattatt caatgggtat cgaggcatca ttcgtatctc CD 2751 atctaatgaa aatTaagaag ataaatctct tcccatttta tccccttttg CD 2801 attttgtcca aattttccta tctaaaaatt cagaggagta tactccggaa CD 2851 atgaaagatg aaggaaattt caatttagat accaattcta ttttttacgc CD 2901 caaatctttt gttaaaaaat ttaatcaaaa ttcaattact tctagtcaaa CD 2951 attcttctgg tacttttatt aataaagaat tttataatca taataatata CD 3001 aatcaggaat tcaattcaag aaaaataatt agaaattttt ttctatcaat CD 3051 tgaaagaaat tttatggaaa tacttttact gagaaagtta ggtcttctag CD 3101 gtaattcaca tagtttgccg agcccttttc aattctcttg ttgggcaaat CD 3151 actcataatc aacctatcat taataggtat tcaatacttg aaaatttaag CD 3201 agatgttttt caagttccaa aatggtattt ttttgatgag aataaaaaga CD 3251 cacataaatt agatttatct aaaaattcaa tctatcattt attaacttgg CD 3301 tctttttcta tcgccctttc atatgaagaa ggagcaattc atttagtagg CD 3351 ccttggacaa tttatctgtg aaaatatatc tatatcatct aaatatcaaa CD 3401 caatctctga atccggtcaa attatagcta ttcatccgga atttctggta CD 3451 gttagactag ctaaaccctc tttagccact ggaggagcca ctattcatag CD 3501 tcattatgga caaattataa aaaaaggaga tgtttCaata accttagtat CD 3551 atgaaaggtt aaaatctggt gatattattc agggtcttcc taaagttgag CD 3601 Taattattag aagctTgtcc aattaattct acttcaataa atttagaaaa CD 3651 tggatttgag aattggaata gagatatgac gaaatctctt ggaagtcttt CD 3701 ggggattcct ccttagtgct aaaacaacca tgaaccaaag tcaaattaac CD 3751 ttagtcgatc aaattcagga ggttCatTag tcacaaggag tatatatatc CD 3801 agataagcat atagaaattg ttgtgcgtca aatgacatca aaagttctta CD 3851 ctttagaaga tggaatggct aatggttCtt tacccggaga attgattgaa CD 3901 tcttcaaggg cacaaaggat gaatcgtgtt tCagaagaat cagttcttta CD 3951 taaacctata ttattaggaa taacaaaggc gtctctcaat actcagagtt CD 4001 ttatatcgga agccagttCt caagaaacta cccgagtatt agccaaagcc CD 4051 gctcttcgag gtcgaattga ctggttaaaa gggttaaaag aaaatgttat CD 4101 ttttggtggc gtaatctccg ccggtactgg atgtcaagaa gtagtgtggc CD 4151 aagtaatttt agaaaaacgg aaagagactt attcgaaaag aaaaaagaat CD 4201 aaacttttca gtggaagagt tcgagatgtt ttctcctatt accaaagaat CD 4251 cttatttttt cctactatga agattattca taaaacattg aagaaaccat CD 4301 tatcggaaat aaatcttgac cctaattatc ggaagtaa FT EDITED CDNA CD 1 gtggcagaat cagctaaatt gctattTtat aataaagtaa tagatggaac CD 51 tgccataaaa caatttattg gcagattagt agctcacttt ggaattacat CD 101 atacagctca cattttggat caacTtaaaa ctctgggttt tCaacaagct CD 151 acttatgccg ctacttcatt aggcattgac gatctcttaa cagcacCgtc CD 201 aaagggatgg ctcattcaag atgcggaaca tcatagttat actttggaga CD 251 agcatcatcg ctatgggaat gtacatgctg Tggaaaaatt acgtcaactc CD 301 attgaaacat ggtatgctac gagtgagtat tTaaaaCaag aaatgaatcc CD 351 taatttcaga atgactgatc ccttaaatcc ggtacatatg atgtcttttt CD 401 caggagctCg aggaagtgca tcaCaagttC atcaattagt aggtatgaga CD 451 ggattagtgt cagatCCtCa gggacaaatt attgatttac ctattaagag CD 501 taatttccgc gagggattat ctttgaccga atatattatt tcttgttacg CD 551 gtgctcgtaa aggagttgtt gatactgccg tgCgaacatC agatgctgga CD 601 taccttacaC gcagactcgt tgaagtggtt caacatattg tagtacgtaa CD 651 aacagattgt aatacttttC gaggtatttc tttgaattct accgaagata CD 701 agaagaaaaa tttacaaata tttactcagc aaaaactagt gggtcgtgta CD 751 ctagcagata atttatatat aaatgcaaga tgtcttgcta tacgtaatca CD 801 agatattaat actaatctta ttgaaaaatT aataactctt aaaacaccat CD 851 taatttcaat acgatctccc ttgacttgca aaagtatgct ttggatttgt CD 901 caattatgct atggatggag tcttactcac tacggtgatt tagtagaatt CD 951 gggagaagct gtgggtatta tagcaggcCa atCtatcggg gaaccaggaa CD 1001 ctcaactaac attaaggact tTccatacgg gtggagtttT cacaggtgac CD 1051 attgcagaac atgtaCgaac cccttttaat gggactattg aattcgatac CD 1101 agatttagtt tatcccacaa gaacacgtca cggtcacccc gcttgggtat CD 1151 gtcgtaccga tctagctgtt actataaaaa gtcagaataa gatacataat CD 1201 ttgatcatcc catctcaaag tctactctta attcaaaaca atcaatatgt CD 1251 agaatcgaaa caacttattg cggaagttca tgctaaggta tctCctttca CD 1301 aagaaaaggt tcagaaatac atttattgta acatagaagg ggaaatgcac CD 1351 tggagtaaaa gggtacgtca tgcttctaaa tatttacata gtaatgttca CD 1401 tttaatattt aatacgggtc acttatggat attatcagga agttctcatg CD 1451 aagataaaac atcctctatg tttttcaaaa atcaggatca aatcaataca CD 1501 aaatttttca tttctccacg taagatactt tttatgaaaa agactaatca CD 1551 agttaattca aaaaatcttg atccttattt agaaaaagaa atggaaactc CD 1601 taaattattc gaatctctat cttggtatac taaacaagag taggaacttc CD 1651 gtatatccca gtattatttt acatgattat gaggtaaaga gaatttatga CD 1701 tgaaaaaaaa ggcgaaaatt ttcttttatt ggaggaaaga catggagaaa CD 1751 aaaaaacaca aatttttcgt cgatttgttc ttaacatacc aaaaagtgga CD 1801 attttagaaa ataaggatat ttTtgccatt tcaaatgaCc ctggatacgg CD 1851 aattcaaagc Ccaggaatta taaaatatgg tactataaaa gtcaaCccaa CD 1901 ttaaaggaaa aggagaaact tttaagaatc gagaaacgaa aattttaaga CD 1951 cttcgaccga gatatcaagt aattgaacca ggaaattttt ttcCcattcc CD 2001 tgaagaagtg cacatttTat atgaatcttt tccaCctatc ttagtacgaa CD 2051 atgatagCct tataaaaaaa aatacacaaa ttacttcgga tattaggagc CD 2101 caagtaggtg gattagttag aataagaaga aagatgaatg atagttacga CD 2151 ggtaaaagta ttacctggCc gtgtataCca tcccgaagag agacgaaaca CD 2201 tatctaaaca aaatgacatt ttggtaccac cgggagaaga aatttctaat CD 2251 aagtttcaat ctgaaaattg gctttatctt gagtggatta caccccctaa CD 2301 agaaaaacct ttcattttca ttagacctgc aattgaattt atagtacctg CD 2351 aagaaacaga tttagcagaa acgtttactc Taaattcaca aaagaaacaa CD 2401 gaaattttga aagtaaaaaa gattcgatat cttctctacg aagatggtga CD 2451 ggaagttgaa gttacgaata aaactggtat tcaattaatt Caaactggtc CD 2501 tagttctgga ttggaaagaa gattcttcta taaaaaaagt ttatgcttct CD 2551 cttactgaaa tagagacaaa tggattatca aaaaaatttc ttcaaattag CD 2601 cttgatagaa caccctattt ttgagataga aaagaagaag aataatgtca CD 2651 atctaaaata cttattcact aatgaaatta attattctag tcactctttc CD 2701 aattatgaaa atggattatt caatgggtat cgaggcatca ttcgtatctc CD 2751 atctaatgaa aatCaagaag ataaatctct tcccatttta tccccttttg CD 2801 attttgtcca aattttccta tctaaaaatt cagaggagta tactccggaa CD 2851 atgaaagatg aaggaaattt caatttagat accaattcta ttttttacgc CD 2901 caaatctttt gttaaaaaat ttaatcaaaa ttcaattact tctagtcaaa CD 2951 attcttctgg tacttttatt aataaagaat tttataatca taataatata CD 3001 aatcaggaat tcaattcaag aaaaataatt agaaattttt ttctatcaat CD 3051 tgaaagaaat tttatggaaa tacttttact gagaaagtta ggtcttctag CD 3101 gtaattcaca tagtttgccg agcccttttc aattctcttg ttgggcaaat CD 3151 actcataatc aacctatcat taataggtat tcaatacttg aaaatttaag CD 3201 agatgttttt caagttccaa aatggtattt ttttgatgag aataaaaaga CD 3251 cacataaatt agatttatct aaaaattcaa tctatcattt attaacttgg CD 3301 tctttttcta tcgccctttc atatgaagaa ggagcaattc atttagtagg CD 3351 ccttggacaa tttatctgtg aaaatatatc tatatcatct aaatatcaaa CD 3401 caatctctga atccggtcaa attatagcta ttcatccgga atttctggta CD 3451 gttagactag ctaaaccctc tttagccact ggaggagcca ctattcatag CD 3501 tcattatgga caaattataa aaaaaggaga tgtttTaata accttagtat CD 3551 atgaaaggtt aaaatctggt gatattattc agggtcttcc taaagttgag CD 3601 Caattattag aagctCgtcc aattaattct acttcaataa atttagaaaa CD 3651 tggatttgag aattggaata gagatatgac gaaatctctt ggaagtcttt CD 3701 ggggattcct ccttagtgct aaaacaacca tgaaccaaag tcaaattaac CD 3751 ttagtcgatc aaattcagga ggttTatCag tcacaaggag tatatatatc CD 3801 agataagcat atagaaattg ttgtgcgtca aatgacatca aaagttctta CD 3851 ctttagaaga tggaatggct aatggttTtt tacccggaga attgattgaa CD 3901 tcttcaaggg cacaaaggat gaatcgtgtt tTagaagaat cagttcttta CD 3951 taaacctata ttattaggaa taacaaaggc gtctctcaat actcagagtt CD 4001 ttatatcgga agccagttTt caagaaacta cccgagtatt agccaaagcc CD 4051 gctcttcgag gtcgaattga ctggttaaaa gggttaaaag aaaatgttat CD 4101 ttttggtggc gtaatctccg ccggtactgg atgtcaagaa gtagtgtggc CD 4151 aagtaatttt agaaaaacgg aaagagactt attcgaaaag aaaaaagaat CD 4201 aaacttttca gtggaagagt tcgagatgtt ttctcctatt accaaagaat CD 4251 cttatttttt cctactatga agattattca taaaacattg aagaaaccat CD 4301 tatcggaaat aaatcttgac cctaattatc ggaagtaa SQ SEQUENCE 1446 AA; VAESAKLLFY NKVIDGTAIK QFIGRLVAHF GITYTAHILD QLKTLGFQQA TYAATSLGID DLLTAPSKGW LIQDAEHHSY TLEKHHRYGN VHAVEKLRQL IETWYATSEY LKQEMNPNFR MTDPLNPVHM MSFSGARGSA SQVHQLVGMR GLVSDPQGQI IDLPIKSNFR EGLSLTEYII SCYGARKGVV DTAVRTSDAG YLTRRLVEVV QHIVVRKTDC NTFRGISLNS TEDKKKNLQI FTQQKLVGRV LADNLYINAR CLAIRNQDIN TNLIEKLITL KTPLISIRSP LTCKSMLWIC QLCYGWSLTH YGDLVELGEA VGIIAGQSIG EPGTQLTLRT FHTGGVFTGD IAEHVRTPFN GTIEFDTDLV YPTRTRHGHP AWVCRTDLAV TIKSQNKIHN LIIPSQSLLL IQNNQYVESK QLIAEVHAKV SPFKEKVQKY IYCNIEGEMH WSKRVRHASK YLHSNVHLIF NTGHLWILSG SSHEDKTSSM FFKNQDQINT KFFISPRKIL FMKKTNQVNS KNLDPYLEKE METLNYSNLY LGILNKSRNF VYPSIILHDY EVKRIYDEKK GENFLLLEER HGEKKTQIFR RFVLNIPKSG ILENKDIFAI SNDPGYGIQS PGIIKYGTIK VNPIKGKGET FKNRETKILR LRPRYQVIEP GNFFPIPEEV HILYESFPPI LVRNDSLIKK NTQITSDIRS QVGGLVRIRR KMNDSYEVKV LPGRVYHPEE RRNISKQNDI LVPPGEEISN KFQSENWLYL EWITPPKEKP FIFIRPAIEF IVPEETDLAE TFTLNSQKKQ EILKVKKIRY LLYEDGEEVE VTNKTGIQLI QTGLVLDWKE DSSIKKVYAS LTEIETNGLS KKFLQISLIE HPIFEIEKKK NNVNLKYLFT NEINYSSHSF NYENGLFNGY RGIIRISSNE NQEDKSLPIL SPFDFVQIFL SKNSEEYTPE MKDEGNFNLD TNSIFYAKSF VKKFNQNSIT SSQNSSGTFI NKEFYNHNNI NQEFNSRKII RNFFLSIERN FMEILLLRKL GLLGNSHSLP SPFQFSCWAN THNQPIINRY SILENLRDVF QVPKWYFFDE NKKTHKLDLS KNSIYHLLTW SFSIALSYEE GAIHLVGLGQ FICENISISS KYQTISESGQ IIAIHPEFLV VRLAKPSLAT GGATIHSHYG QIIKKGDVLI TLVYERLKSG DIIQGLPKVE QLLEARPINS TSINLENGFE NWNRDMTKSL GSLWGFLLSA KTTMNQSQIN LVDQIQEVYQ SQGVYISDKH IEIVVRQMTS KVLTLEDGMA NGFLPGELIE SSRAQRMNRV LEESVLYKPI LLGITKASLN TQSFISEASF QETTRVLAKA ALRGRIDWLK GLKENVIFGG VISAGTGCQE VVWQVILEKR KETYSKRKKN KLFSGRVRDV FSYYQRILFF PTMKIIHKTL KKPLSEINLD PNYRK* // ID AB086179_7 STANDARD; PRT; 236 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55329.1 FT PROTEIN_NAME : ribosomal protein S2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 14187 - 14894 FT DIRECTIONS : positive FT EDITING : 5 Y(taT) -> Y(taC) FT EDITING : 29 L(cTT) -> P(cCC) FT EDITING : 36 S(tCc) -> F(tTc) FT EDITING : 53 F(Ttc) -> L(Ctc) FT EDITING : 105 S(tCa) -> L(tTa) FT EDITING : 121 P(cCa) -> L(cTa) FT EDITING : 162 L(cTa) -> P(cCa) FT EDITING : 166 T(aCa) -> I(aTa) FT EDITING : 170 *(Taa) -> Q(Caa) FT EDITING : 171 *(Taa) -> Q(Caa) FT EDITING : 183 S(tCa) -> L(tTa) FT EDITING : 197 S(Tca) -> P(Cca) FT EDITING : 213 L(tTa) -> S(tCa) FT EDITING : 214 T(aCt) -> I(aTt) FT EDITING : 218 S(tCg) -> L(tTg) FT EDITING : 221 S(tCa) -> L(tTa) FT EDITING : 225 T(aCt) -> I(aTt) FT EDITING : 226 *(Tag) -> Q(Cag) FT CODON_START : 1 CL CDNALEN 708 NT; CD 1 atgaaacaaa aataTtggaa cattaatttg gaagaaatga tggaagcagg CD 51 aattcatttt ggtcatcaag ctgcaaagtg gaatcTTaaa atgaaacctt CD 101 atatctCcac agaacgtagg ggcattcata tcctaaatgt tactaaaacg CD 151 gctagaTtct tatcagaagc ctgtgatttt gttgctaatg ctgcgagtaa CD 201 agggaagcag tttttaatag taggtacaaa atatcaagca gctgatttag CD 251 tagcatcagc tgctctaaag gctcgatgtc attatgtaaa tcaaaagtgg CD 301 cttggtggaa tgtCaacaaa ttggtctact atagaaaaac gtttacggaa CD 351 atttgaagac cCacaaacga agaaaaatat gggagcgctt gatgagcttc CD 401 cgaaaaaaga agcagccaat ttggaaagac aattggctca actgcaaaaa CD 451 tatttaggtg ggattaggta tatgacaaac ttacTagata ttgttaCaat CD 501 tgtggacTaa Taaaaagaat taacagctat tcgggaatgt attaattCaa CD 551 atattccaac tatttgttta gttgatacag attgcgatTc agatcttacg CD 601 gatatctcaa ttccagcaaa tgatgatgct agagcttTaa Ctagatgggt CD 651 ttCggataaa tCaacttcag ctaCtTagga aggtcgttgt aattctacga CD 701 aaatctga FT EDITED CDNA CD 1 atgaaacaaa aataCtggaa cattaatttg gaagaaatga tggaagcagg CD 51 aattcatttt ggtcatcaag ctgcaaagtg gaatcCCaaa atgaaacctt CD 101 atatctTcac agaacgtagg ggcattcata tcctaaatgt tactaaaacg CD 151 gctagaCtct tatcagaagc ctgtgatttt gttgctaatg ctgcgagtaa CD 201 agggaagcag tttttaatag taggtacaaa atatcaagca gctgatttag CD 251 tagcatcagc tgctctaaag gctcgatgtc attatgtaaa tcaaaagtgg CD 301 cttggtggaa tgtTaacaaa ttggtctact atagaaaaac gtttacggaa CD 351 atttgaagac cTacaaacga agaaaaatat gggagcgctt gatgagcttc CD 401 cgaaaaaaga agcagccaat ttggaaagac aattggctca actgcaaaaa CD 451 tatttaggtg ggattaggta tatgacaaac ttacCagata ttgttaTaat CD 501 tgtggacCaa Caaaaagaat taacagctat tcgggaatgt attaattTaa CD 551 atattccaac tatttgttta gttgatacag attgcgatCc agatcttacg CD 601 gatatctcaa ttccagcaaa tgatgatgct agagcttCaa Ttagatgggt CD 651 ttTggataaa tTaacttcag ctaTtCagga aggtcgttgt aattctacga CD 701 aaatctga SQ SEQUENCE 236 AA; MKQKYWNINL EEMMEAGIHF GHQAAKWNPK MKPYIFTERR GIHILNVTKT ARLLSEACDF VANAASKGKQ FLIVGTKYQA ADLVASAALK ARCHYVNQKW LGGMLTNWST IEKRLRKFED LQTKKNMGAL DELPKKEAAN LERQLAQLQK YLGGIRYMTN LPDIVIIVDQ QKELTAIREC INLNIPTICL VDTDCDPDLT DISIPANDDA RASIRWVLDK LTSAIQEGRC NSTKI* // ID AB086179_8 STANDARD; PRT; 249 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : atpI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55330.1 FT PROTEIN_NAME : ATPase synthase IV subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 15107 - 15853 FT DIRECTIONS : positive FT EDITING : 24 *(Taa) -> Q(Caa) FT EDITING : 36 Y(Tat) -> H(Cat) FT EDITING : 38 *(Tag) -> Q(Cag) FT EDITING : 40 P(cCt) -> L(cTt) FT EDITING : 44 R(Cgg) -> W(Tgg) FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 55 T(aCt) -> I(aTt) FT EDITING : 59 *(Tag) -> Q(Cag) FT EDITING : 86 *(Taa) -> Q(Caa) FT EDITING : 105 P(CCc) -> F(TTc) FT EDITING : 106 T(aCt) -> I(aTt) FT EDITING : 115 P(cCc) -> L(cTc) FT EDITING : 141 S(tCa) -> L(tTa) FT EDITING : 146 P(Cca) -> S(Tca) FT EDITING : 184 L(cTt) -> P(cCt) FT EDITING : 220 S(tCa) -> L(tTa) FT EDITING : 228 *(Taa) -> Q(Caa) FT EDITING : 232 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 747 NT; CD 1 atgtatagtg cacaatcttc cattagcaaa ctcactaatt tatgcgagat CD 51 atctagtgtg gaagtaggtT aacatttcta ctggcaaata ggtggttttc CD 101 aggttTatgc aTaggtacCt ataacttccC ggatcgttat tgcaatttta CD 151 ttaggttCag ctaCtttagc cactTagaat ttacagacta ttccaactag CD 201 tggtcaaaac tttgtcgaat atattttaga attcattcga gatttgacta CD 251 gaactTaaat aggagaagag gaataccgtc cttgggttcc tttcattgga CD 301 actatgtttc ttCCcaCttt cgtttctaat tggtcaggcg ctcCcctccc CD 351 ctggagaatt tttgaattac ctcacggaga attagctgca cctacaaatg CD 401 atattaatac tactgttgct tCagctttgc ctacaCcagt agcatatttc CD 451 tatgcaggtc ttcgtaaaaa aggtttaagt tattctggta agtatattca CD 501 accaaccccg atacttctac cgatcaatat tctagaagat ttcactaaac CD 551 Ttttaccact tagttttcga ctctttggaa atatattagc tgatgagtta CD 601 gtagttgctg ttcctatttc tttagtacct ctagttgttc ctatacctat CD 651 gatgttttCa ggactattca caagtgctat tTaagcttta atttCtgcga CD 701 ctttagctgc agcttatatt ggagaatcaa tggagggtca tcattaa FT EDITED CDNA CD 1 atgtatagtg cacaatcttc cattagcaaa ctcactaatt tatgcgagat CD 51 atctagtgtg gaagtaggtC aacatttcta ctggcaaata ggtggttttc CD 101 aggttCatgc aCaggtacTt ataacttccT ggatcgttat tgcaatttta CD 151 ttaggttTag ctaTtttagc cactCagaat ttacagacta ttccaactag CD 201 tggtcaaaac tttgtcgaat atattttaga attcattcga gatttgacta CD 251 gaactCaaat aggagaagag gaataccgtc cttgggttcc tttcattgga CD 301 actatgtttc ttTTcaTttt cgtttctaat tggtcaggcg ctcTcctccc CD 351 ctggagaatt tttgaattac ctcacggaga attagctgca cctacaaatg CD 401 atattaatac tactgttgct tTagctttgc ctacaTcagt agcatatttc CD 451 tatgcaggtc ttcgtaaaaa aggtttaagt tattctggta agtatattca CD 501 accaaccccg atacttctac cgatcaatat tctagaagat ttcactaaac CD 551 Ctttaccact tagttttcga ctctttggaa atatattagc tgatgagtta CD 601 gtagttgctg ttcctatttc tttagtacct ctagttgttc ctatacctat CD 651 gatgttttTa ggactattca caagtgctat tCaagcttta atttTtgcga CD 701 ctttagctgc agcttatatt ggagaatcaa tggagggtca tcattaa SQ SEQUENCE 249 AA; MYSAQSSISK LTNLCEISSV EVGQHFYWQI GGFQVHAQVL ITSWIVIAIL LGLAILATQN LQTIPTSGQN FVEYILEFIR DLTRTQIGEE EYRPWVPFIG TMFLFIFVSN WSGALLPWRI FELPHGELAA PTNDINTTVA LALPTSVAYF YAGLRKKGLS YSGKYIQPTP ILLPINILED FTKPLPLSFR LFGNILADEL VVAVPISLVP LVVPIPMMFL GLFTSAIQAL IFATLAAAYI GESMEGHH* // ID AB086179_9 STANDARD; PRT; 82 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : atpH FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55331.1 FT PROTEIN_NAME : ATPase III subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 16730 - 16975 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 11 T(aCt) -> I(aTt) FT EDITING : 21 F(tTt) -> S(tCt) FT EDITING : 24 F(TTt) -> P(CCt) FT EDITING : 34 *(Taa) -> Q(Caa) FT EDITING : 40 V(gTt) -> A(gCt) FT EDITING : 42 *(Taa) -> Q(Caa) FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 55 S(tCa) -> L(tTa) FT EDITING : 59 S(tCt) -> F(tTt) FT EDITING : 70 A(gCa) -> V(gTa) FT EDITING : 74 P(cCt) -> L(cTt) FT EDITING : 75 P(CCa) -> L(TTa) FT EDITING : 76 S(tCt) -> F(tTt) FT EDITING : 80 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 246 NT; CD 1 aCgaaccctt tgatttctgc tgcttccgtt aCtgctgctg gattagctgt CD 51 gggtcttgct tTtattggaT Ttggtgttgg gcagggtact gctgcaggtT CD 101 aagctgtgga aggtattgTt agaTaacctg aagcagaagg taaaatacga CD 151 ggtacttCat tgtCaagctt agcttCtatg gaagctctga ctatttatgg CD 201 tttagtcgCa gctctagcac CtCCatCtgc aaatccttCc gtctaa FT EDITED CDNA CD 1 aTgaaccctt tgatttctgc tgcttccgtt aTtgctgctg gattagctgt CD 51 gggtcttgct tCtattggaC Ctggtgttgg gcagggtact gctgcaggtC CD 101 aagctgtgga aggtattgCt agaCaacctg aagcagaagg taaaatacga CD 151 ggtacttTat tgtTaagctt agcttTtatg gaagctctga ctatttatgg CD 201 tttagtcgTa gctctagcac TtTTatTtgc aaatccttTc gtctaa SQ SEQUENCE 82 AA; MNPLISAASV IAAGLAVGLA SIGPGVGQGT AAGQAVEGIA RQPEAEGKIR GTLLLSLAFM EALTIYGLVV ALALLFANPF V* // ID AB086179_10 STANDARD; PRT; 185 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : atpF FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55332.1 FT PROTEIN_NAME : ATPase I subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 49/1 FT EDITING : 6 S(tCt) -> F(tTt) FT EDITING : 7 L(Ctt) -> F(Ttt) FT EDITING : 30 N(aaT) -> N(aaC) FT EDITING : 71 Y(taT) -> Y(taC) FT EDITING : 78 P(cCt) -> L(cTt) FT EDITING : 139 *(Taa) -> Q(Caa) FT EDITING : 156 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 555 NT; CD 1 atgagaaatt tgatttCtCt tgttattcct tttcattttt ggcttcctgc CD 51 agagggtttt aaactaaata caaatctttt agaaacaaaT ttaatcaatt CD 101 taggtgttgt gcttggttta ttagtttact ttggaaaggg agtgttaaat CD 151 aatttattag ataagcgtaa acagacgatt ttaagtacta ttcgcgatgc CD 201 agaggaacgg taTaaagaag ctactgataa acCtaaacaa gcccagattc CD 251 gtttgcaaca agctgaatta aaagcaaatg aaattcgagt caatggactt CD 301 tctgaaatgg aaaaagaaaa acaggattta attaatattg ctgatgaaga CD 351 ttcaaaacgt ttagaagatt ctaaaaatgc tactattcgt ttcgaagaac CD 401 agagagcaat tgagTaagtt agacaacagg tttctcgtct cgcattagaa CD 451 agagcttcag aagtttCaaa caattgttta aatagcgaat tgcattcacg CD 501 catgattgac tatcatattg gtctgcttaa gaccatggga agcacaactg CD 551 aatag FT EDITED CDNA CD 1 atgagaaatt tgatttTtTt tgttattcct tttcattttt ggcttcctgc CD 51 agagggtttt aaactaaata caaatctttt agaaacaaaC ttaatcaatt CD 101 taggtgttgt gcttggttta ttagtttact ttggaaaggg agtgttaaat CD 151 aatttattag ataagcgtaa acagacgatt ttaagtacta ttcgcgatgc CD 201 agaggaacgg taCaaagaag ctactgataa acTtaaacaa gcccagattc CD 251 gtttgcaaca agctgaatta aaagcaaatg aaattcgagt caatggactt CD 301 tctgaaatgg aaaaagaaaa acaggattta attaatattg ctgatgaaga CD 351 ttcaaaacgt ttagaagatt ctaaaaatgc tactattcgt ttcgaagaac CD 401 agagagcaat tgagCaagtt agacaacagg tttctcgtct cgcattagaa CD 451 agagcttcag aagtttTaaa caattgttta aatagcgaat tgcattcacg CD 501 catgattgac tatcatattg gtctgcttaa gaccatggga agcacaactg CD 551 aatag SQ SEQUENCE 185 AA; MRNLIFFVIP FHFWLPAEGF KLNTNLLETN LINLGVVLGL LVYFGKGVLN NLLDKRKQTI LSTIRDAEER YKEATDKLKQ AQIRLQQAEL KANEIRVNGL SEMEKEKQDL INIADEDSKR LEDSKNATIR FEEQRAIEQV RQQVSRLALE RASEVLNNCL NSELHSRMID YHIGLLKTMG STTE* // ID AB086179_11 STANDARD; PRT; 508 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : atpA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55333.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 18663 - 20186 FT DIRECTIONS : positive FT EDITING : 22 *(Tag) -> Q(Cag) FT EDITING : 41 C(Tgt) -> R(Cgt) FT EDITING : 56 S(tCt) -> F(tTt) FT EDITING : 76 S(tCa) -> L(tTa) FT EDITING : 105 S(tCa) -> L(tTa) FT EDITING : 107 C(Tgt) -> R(Cgt) FT EDITING : 109 A(gCa) -> V(gTa) FT EDITING : 135 L(cTc) -> P(cCc) FT EDITING : 146 L(cTa) -> P(cCa) FT EDITING : 160 T(aCt) -> I(aTt) FT EDITING : 162 C(Tgc) -> R(Cgc) FT EDITING : 246 S(tCa) -> L(tTa) FT EDITING : 250 S(tCc) -> F(tTc) FT EDITING : 258 S(tCa) -> L(tTa) FT EDITING : 267 *(Taa) -> Q(Caa) FT EDITING : 269 *(Taa) -> Q(Caa) FT EDITING : 331 T(aCt) -> I(aTt) FT EDITING : 350 S(tCt) -> F(tTt) FT EDITING : 378 *(Taa) -> Q(Caa) FT EDITING : 383 P(cCt) -> L(cTt) FT EDITING : 425 *(Taa) -> Q(Caa) FT EDITING : 446 S(tCg) -> L(tTg) FT EDITING : 453 *(Taa) -> Q(Caa) FT EDITING : 494 T(aCt) -> I(aTt) FT EDITING : 502 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1524 NT; CD 1 atggtaaaca ttcgacccga cgaaattagc aatattattc gtaagcaaat CD 51 tgagcagtat aatTaggaag tcaaagttat caatatcggt actgtacttc CD 101 aggtaggaga tggtattgca Tgtatatacg gtctcgataa agttatggcc CD 151 ggtgaattgg tagaatCtga agatggcact gtaggcattg ccttaaattt CD 201 ggaatctgac aatgttggag ttgtttCaat gggagatgga ttgagtattc CD 251 aggaaggtag ctccgtagaa gcaacaggta aaattgctca aattccagta CD 301 agtgatgcct attCaggtTg tgtcgCaaat gcgttagccc aacctatcga CD 351 tggtaagggt caaataccag cttacgaatt cagactcatc gaatctcccg CD 401 ctcTcggtat aatttcaaga cgttctgtat atgaacTaat gcaaacagga CD 451 cttattgcta ttgattctat gattcctaCt ggaTgcggtc agcgagaatt CD 501 aattattgga gatagacaga ctggtaaaac agcagtagca acagatacta CD 551 ttctaaatca gaaaggtcaa aatgtaatat gtgtctatgt tgctattggg CD 601 caaaaagcct cttccgtagc tcaagtagtt aatacttttg aggaacgtgg CD 651 tgcattggaa tatactattg tagtagcaga aactgcagat tctcccgcta CD 701 ctttgcagta tcttgccccc tatacaggag cagcttCagc agaatactCc CD 751 atgtatcgta aacaacatac ttCaattatt tatgatgatc tttctaaaTa CD 801 agcaTaagct tatcgacaga tgtctctctt attaagaagg ccaccgggtc CD 851 gagaagcata cccaggagat gttttttacc tgcattcccg tctcttggaa CD 901 agagctgcta agttgagttc gcaattaggt gaaggaagta tgactgcttt CD 951 gcctatagtt gaaactcaag caggagatgt ttcagcttat aCtcccacta CD 1001 atgtaatttc tataacagat ggacaaatat ttttatcagc cgatttatCt CD 1051 aatgcaggaa ttcgtcccgc gattaatgta ggtatttctg tatccagagt CD 1101 gggatctgca gctcagatta aagctatgaa aTaagtggct ggaaagcCta CD 1151 aattagaatt agctcaattc gcagaattag aagcttttgc acaatttgcc CD 1201 tctgatctag ataaagctac gcagaatcaa ttagcaaggg gtcaacgttt CD 1251 acgtgaatta cttaagcaat ctTaatcagc tcctcttgct gtggaagaac CD 1301 aagtagctac tatttatact ggagtaaatg gatattCgga tgtattggaa CD 1351 gtagaaTaag taaagaaatt tcttgttcaa ttacgtgaat atttaataac CD 1401 aaataaacct caatttgttg agattatacg ttctactaag gttttcacag CD 1451 aacaagctga gattatttta aaagaagcta Ctaaggaaca tactgagttt CD 1501 ttttCacttc aagaacaaaa gtaa FT EDITED CDNA CD 1 atggtaaaca ttcgacccga cgaaattagc aatattattc gtaagcaaat CD 51 tgagcagtat aatCaggaag tcaaagttat caatatcggt actgtacttc CD 101 aggtaggaga tggtattgca Cgtatatacg gtctcgataa agttatggcc CD 151 ggtgaattgg tagaatTtga agatggcact gtaggcattg ccttaaattt CD 201 ggaatctgac aatgttggag ttgtttTaat gggagatgga ttgagtattc CD 251 aggaaggtag ctccgtagaa gcaacaggta aaattgctca aattccagta CD 301 agtgatgcct attTaggtCg tgtcgTaaat gcgttagccc aacctatcga CD 351 tggtaagggt caaataccag cttacgaatt cagactcatc gaatctcccg CD 401 ctcCcggtat aatttcaaga cgttctgtat atgaacCaat gcaaacagga CD 451 cttattgcta ttgattctat gattcctaTt ggaCgcggtc agcgagaatt CD 501 aattattgga gatagacaga ctggtaaaac agcagtagca acagatacta CD 551 ttctaaatca gaaaggtcaa aatgtaatat gtgtctatgt tgctattggg CD 601 caaaaagcct cttccgtagc tcaagtagtt aatacttttg aggaacgtgg CD 651 tgcattggaa tatactattg tagtagcaga aactgcagat tctcccgcta CD 701 ctttgcagta tcttgccccc tatacaggag cagcttTagc agaatactTc CD 751 atgtatcgta aacaacatac ttTaattatt tatgatgatc tttctaaaCa CD 801 agcaCaagct tatcgacaga tgtctctctt attaagaagg ccaccgggtc CD 851 gagaagcata cccaggagat gttttttacc tgcattcccg tctcttggaa CD 901 agagctgcta agttgagttc gcaattaggt gaaggaagta tgactgcttt CD 951 gcctatagtt gaaactcaag caggagatgt ttcagcttat aTtcccacta CD 1001 atgtaatttc tataacagat ggacaaatat ttttatcagc cgatttatTt CD 1051 aatgcaggaa ttcgtcccgc gattaatgta ggtatttctg tatccagagt CD 1101 gggatctgca gctcagatta aagctatgaa aCaagtggct ggaaagcTta CD 1151 aattagaatt agctcaattc gcagaattag aagcttttgc acaatttgcc CD 1201 tctgatctag ataaagctac gcagaatcaa ttagcaaggg gtcaacgttt CD 1251 acgtgaatta cttaagcaat ctCaatcagc tcctcttgct gtggaagaac CD 1301 aagtagctac tatttatact ggagtaaatg gatattTgga tgtattggaa CD 1351 gtagaaCaag taaagaaatt tcttgttcaa ttacgtgaat atttaataac CD 1401 aaataaacct caatttgttg agattatacg ttctactaag gttttcacag CD 1451 aacaagctga gattatttta aaagaagcta Ttaaggaaca tactgagttt CD 1501 ttttTacttc aagaacaaaa gtaa SQ SEQUENCE 508 AA; MVNIRPDEIS NIIRKQIEQY NQEVKVINIG TVLQVGDGIA RIYGLDKVMA GELVEFEDGT VGIALNLESD NVGVVLMGDG LSIQEGSSVE ATGKIAQIPV SDAYLGRVVN ALAQPIDGKG QIPAYEFRLI ESPAPGIISR RSVYEPMQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQKGQ NVICVYVAIG QKASSVAQVV NTFEERGALE YTIVVAETAD SPATLQYLAP YTGAALAEYF MYRKQHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE RAAKLSSQLG EGSMTALPIV ETQAGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKLKLELAQF AELEAFAQFA SDLDKATQNQ LARGQRLREL LKQSQSAPLA VEEQVATIYT GVNGYLDVLE VEQVKKFLVQ LREYLITNKP QFVEIIRSTK VFTEQAEIIL KEAIKEHTEF FLLQEQK* // ID AB086179_15 STANDARD; PRT; 56 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbK FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55337.1 FT PROTEIN_NAME : photosystem II K-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 24093 - 24260 FT DIRECTIONS : negative FT EDITING : 17 S(tCa) -> L(tTa) FT EDITING : 20 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 168 NT; CD 1 atgttttata tccatctgga aaatactttt gatttaagta gtactatctC CD 51 agttaaatCa cccgaagctt atgctatttt tgatccaatt gtagatgtaa CD 101 tgccaattat acctctattc ttttttcttt tagcctttgt ttggcaagct CD 151 tctgtaagtt ttcgataa FT EDITED CDNA CD 1 atgttttata tccatctgga aaatactttt gatttaagta gtactatctT CD 51 agttaaatTa cccgaagctt atgctatttt tgatccaatt gtagatgtaa CD 101 tgccaattat acctctattc ttttttcttt tagcctttgt ttggcaagct CD 151 tctgtaagtt ttcgataa SQ SEQUENCE 56 AA; MFYIHLENTF DLSSTILVKL PEAYAIFDPI VDVMPIIPLF FFLLAFVWQA SVSFR* // ID AB086179_16 STANDARD; PRT; 514 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : chlB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55338.1 FT PROTEIN_NAME : protochlorophyllide reductase 58 kDa chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 24839 - 26380 FT DIRECTIONS : positive FT EDITING : 31 Y(Tat) -> H(Cat) FT EDITING : 33 F(TTt) -> P(CCt) FT EDITING : 54 S(Tct) -> P(Cct) FT EDITING : 91 S(tCa) -> L(tTa) FT EDITING : 93 L(cTc) -> P(cCc) FT EDITING : 100 S(tCa) -> L(tTa) FT EDITING : 104 S(tCa) -> L(tTa) FT EDITING : 121 S(tCg) -> L(tTg) FT EDITING : 127 H(Cat) -> Y(Tat) FT EDITING : 128 *(Tga) -> R(Cga) FT EDITING : 133 *(Taa) -> Q(Caa) FT EDITING : 137 *(Tga) -> R(Cga) FT EDITING : 141 *(Taa) -> Q(Caa) FT EDITING : 172 S(tCc) -> F(tTc) FT EDITING : 188 L(Cta) -> L(Tta) FT EDITING : 219 S(tCa) -> L(tTa) FT EDITING : 246 L(cTt) -> P(cCt) FT EDITING : 257 *(Tga) -> R(Cga) FT EDITING : 283 *(Tag) -> Q(Cag) FT EDITING : 284 *(Taa) -> Q(Caa) FT EDITING : 291 V(gTt) -> A(gCt) FT EDITING : 378 T(aCt) -> I(aTt) FT EDITING : 401 L(cTa) -> P(cCa) FT EDITING : 407 L(Ctt) -> F(Ttt) FT EDITING : 472 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1542 NT; CD 1 atgaaattag cttattggat gtacgctggc cctgctcaca ttggaacgct CD 51 tcgggtagcc agttccttta aaaatgttca tgctattatg TatgccTTtt CD 101 taggagatga ctatttcaat gttatgcgtt ccatgttaga aagagaaaga CD 151 gattttactT ctgtaactgc tagtatagtg gatcgacatg ttttagcacg CD 201 tggatctcaa gaaaaagttg ttgataatat tatgagaaaa gataaggaag CD 251 aatgtcctga tttaatcgta tCaacacTca catgtacttc tagtatttCa CD 301 caggaagatt Cacagaattt tgttgataga gcatctatta gtgttaattc CD 351 tgatgtaatt tCggcagatg taaatcatCa tTgagttaat gaacttTaag CD 401 cagcagatTg aactttggaa Taaatagttc gatattactt agataaggct CD 451 cgtagacagg gaaagttgaa tcaatctata acagatgtac cttctgcgaa CD 501 tattattggt atttCcacat taggctttca caaccaacac gattgtcgtg CD 551 aattgaaacg tCtattaaaa gatttaggca taaaaattaa ccaagtaatt CD 601 cctgaagggg gatttgtaga agatttagaa aaattaccaa aagcttggtt CD 651 taattCaatt ccctatcgtg aggtaggctt aatgacggca atttatttgg CD 701 aaaaggaatt tggtatgcct tacgtatcta taactcTtat gggaattgca CD 751 gatattgttc aatgtatcTg acagatacag aaacgcgtta atacatggac CD 801 tcactttttg ttgaatcaaa aacttgatta tgaactttat attgatTagT CD 851 aaacaagatt tatttctcaa gTtgcttggt tttcaagatc catcgattgc CD 901 cagaatttaa caggaaaaaa agcagtggtt tttggtgatg caactcatgc CD 951 cagttcaatg actaagatac ttgctcaaga aatgggaatt cgtgtaagtt CD 1001 gtgcaggtac ttattgtaaa cacgacgcag aatggtttga ggagcaagtt CD 1051 cagggtttct gtgatgagat actcattaca gatgatcata ctcaagttgg CD 1101 agatacaatt gctcgtatag aaccatcagc taCttttggt actcaaatgg CD 1151 aacgtcatat aggtaaacgt cttgatattc cctgcggagt tatttcttca CD 1201 cTagttcata tacagaatCt tcctttaggt tatcgaccct ttttgggcta CD 1251 tgaagggacc aatcaaatag ctgatttggt ttacaattca ttcactttag CD 1301 gtatggaaga tcatctctta gaaatttttg gtggtcatga cactaaagaa CD 1351 gtaataacta aatcattatc gacagataat gatttaactt ggaattcaga CD 1401 aagtcaactt gaatCaaata aaattcctgg ttttgttaga ggtaaaataa CD 1451 aaagaaatac agagagattt gcacgacaaa atggtatcac aggcataaca CD 1501 gtagaagtaa tgtatgctgc taaagaagcc ttaaatgctt ag FT EDITED CDNA CD 1 atgaaattag cttattggat gtacgctggc cctgctcaca ttggaacgct CD 51 tcgggtagcc agttccttta aaaatgttca tgctattatg CatgccCCtt CD 101 taggagatga ctatttcaat gttatgcgtt ccatgttaga aagagaaaga CD 151 gattttactC ctgtaactgc tagtatagtg gatcgacatg ttttagcacg CD 201 tggatctcaa gaaaaagttg ttgataatat tatgagaaaa gataaggaag CD 251 aatgtcctga tttaatcgta tTaacacCca catgtacttc tagtatttTa CD 301 caggaagatt Tacagaattt tgttgataga gcatctatta gtgttaattc CD 351 tgatgtaatt tTggcagatg taaatcatTa tCgagttaat gaacttCaag CD 401 cagcagatCg aactttggaa Caaatagttc gatattactt agataaggct CD 451 cgtagacagg gaaagttgaa tcaatctata acagatgtac cttctgcgaa CD 501 tattattggt atttTcacat taggctttca caaccaacac gattgtcgtg CD 551 aattgaaacg tTtattaaaa gatttaggca taaaaattaa ccaagtaatt CD 601 cctgaagggg gatttgtaga agatttagaa aaattaccaa aagcttggtt CD 651 taattTaatt ccctatcgtg aggtaggctt aatgacggca atttatttgg CD 701 aaaaggaatt tggtatgcct tacgtatcta taactcCtat gggaattgca CD 751 gatattgttc aatgtatcCg acagatacag aaacgcgtta atacatggac CD 801 tcactttttg ttgaatcaaa aacttgatta tgaactttat attgatCagC CD 851 aaacaagatt tatttctcaa gCtgcttggt tttcaagatc catcgattgc CD 901 cagaatttaa caggaaaaaa agcagtggtt tttggtgatg caactcatgc CD 951 cagttcaatg actaagatac ttgctcaaga aatgggaatt cgtgtaagtt CD 1001 gtgcaggtac ttattgtaaa cacgacgcag aatggtttga ggagcaagtt CD 1051 cagggtttct gtgatgagat actcattaca gatgatcata ctcaagttgg CD 1101 agatacaatt gctcgtatag aaccatcagc taTttttggt actcaaatgg CD 1151 aacgtcatat aggtaaacgt cttgatattc cctgcggagt tatttcttca CD 1201 cCagttcata tacagaatTt tcctttaggt tatcgaccct ttttgggcta CD 1251 tgaagggacc aatcaaatag ctgatttggt ttacaattca ttcactttag CD 1301 gtatggaaga tcatctctta gaaatttttg gtggtcatga cactaaagaa CD 1351 gtaataacta aatcattatc gacagataat gatttaactt ggaattcaga CD 1401 aagtcaactt gaatTaaata aaattcctgg ttttgttaga ggtaaaataa CD 1451 aaagaaatac agagagattt gcacgacaaa atggtatcac aggcataaca CD 1501 gtagaagtaa tgtatgctgc taaagaagcc ttaaatgctt ag SQ SEQUENCE 514 AA; MKLAYWMYAG PAHIGTLRVA SSFKNVHAIM HAPLGDDYFN VMRSMLERER DFTPVTASIV DRHVLARGSQ EKVVDNIMRK DKEECPDLIV LTPTCTSSIL QEDLQNFVDR ASISVNSDVI LADVNHYRVN ELQAADRTLE QIVRYYLDKA RRQGKLNQSI TDVPSANIIG IFTLGFHNQH DCRELKRLLK DLGIKINQVI PEGGFVEDLE KLPKAWFNLI PYREVGLMTA IYLEKEFGMP YVSITPMGIA DIVQCIRQIQ KRVNTWTHFL LNQKLDYELY IDQQTRFISQ AAWFSRSIDC QNLTGKKAVV FGDATHASSM TKILAQEMGI RVSCAGTYCK HDAEWFEEQV QGFCDEILIT DDHTQVGDTI ARIEPSAIFG TQMERHIGKR LDIPCGVISS PVHIQNFPLG YRPFLGYEGT NQIADLVYNS FTLGMEDHLL EIFGGHDTKE VITKSLSTDN DLTWNSESQL ELNKIPGFVR GKIKRNTERF ARQNGITGIT VEVMYAAKEA LNA* // ID AB086179_17 STANDARD; PRT; 85 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps16 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55339.1 FT PROTEIN_NAME : ribosomal protein S16 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 14/1 FT EDITING : 38 S(tCC) -> F(tTT) FT EDITING : 56 S(TCt) -> L(CTt) FT EDITING : 57 T(aCt) -> I(aTt) FT EDITING : 71 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 255 NT; CD 1 atggtaaaac ttcgtctaaa gcggtatggt agaaagcaac aaaataccta CD 51 tcgaattgtt gcaattgatg ctcaatctcg gagagaagga cgagctcttg CD 101 aagaagttgg ttCCtataat ttgagaaaag atcaaactca attagatatt CD 151 ttagctattg ttaatTCtaC tagagaaggg gctcaaccta cagaaactgt CD 201 ttatgatatt tCaagaaaag caggaatatt tgaacgaatt aaggctaatc CD 251 cttag FT EDITED CDNA CD 1 atggtaaaac ttcgtctaaa gcggtatggt agaaagcaac aaaataccta CD 51 tcgaattgtt gcaattgatg ctcaatctcg gagagaagga cgagctcttg CD 101 aagaagttgg ttTTtataat ttgagaaaag atcaaactca attagatatt CD 151 ttagctattg ttaatCTtaT tagagaaggg gctcaaccta cagaaactgt CD 201 ttatgatatt tTaagaaaag caggaatatt tgaacgaatt aaggctaatc CD 251 cttag SQ SEQUENCE 85 AA; MVKLRLKRYG RKQQNTYRIV AIDAQSRREG RALEEVGFYN LRKDQTQLDI LAIVNLIREG AQPTETVYDI LRKAGIFERI KANP* // ID AB086179_18 STANDARD; PRT; 52 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ORF51 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55340.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 27724 - 27879 FT DIRECTIONS : positive FT EDITING : 8 A(gCa) -> V(gTa) FT EDITING : 21 L(Cta) -> L(Tta) FT EDITING : 23 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 156 NT; CD 1 atgaatttaa tatttggttt tgCacaatta ttcctctatc accctctttt CD 51 cctcctactt CtatacaCtt atttagttct ttttattcca ctaaaaggtg CD 101 caattaatat aaccaatatt ttcccaactt tacttaaatc catagggata CD 151 aaataa FT EDITED CDNA CD 1 atgaatttaa tatttggttt tgTacaatta ttcctctatc accctctttt CD 51 cctcctactt TtatacaTtt atttagttct ttttattcca ctaaaaggtg CD 101 caattaatat aaccaatatt ttcccaactt tacttaaatc catagggata CD 151 aaataa SQ SEQUENCE 52 AA; MNLIFGFVQL FLYHPLFLLL LYIYLVLFIP LKGAINITNI FPTLLKSIGI K* // ID AB086179_21 STANDARD; PRT; 2393 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ycf2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55342.1 FT PROTEIN_NAME : Ycf2 protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 33690 - 40868 FT DIRECTIONS : positive FT EDITING : 344 *(Tag) -> Q(Cag) FT EDITING : 744 *(Tag) -> Q(Cag) FT EDITING : 861 *(Tga) -> R(Cga) FT EDITING : 1131 *(Taa) -> Q(Caa) FT EDITING : 1255 *(Taa) -> Q(Caa) FT EDITING : 1687 P(cCt) -> L(cTt) FT EDITING : 1748 S(tCt) -> F(tTt) FT EDITING : 1805 *(Tga) -> R(Cga) FT EDITING : 2158 *(Taa) -> Q(Caa) FT EDITING : 2307 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 7179 NT; CD 1 atgaaacaga aattattaga aaacaaattt tcatacagga aattcaaatt CD 51 agaagaaata aagaaatatg aatatttatt aaattcatgt attaactgga CD 101 atttaatcaa attagtaact ggaattcctt ccaatcggga acatctcatt CD 151 aagctctttg acttacgaat tcttagttca ttaattttac gcgatttacg CD 201 taagtcagaa atgaaaaaaa gtttaatact taagagtttt ccactactta CD 251 tactatctat gtttatacat cgtatgaata gtaggaatat tgttgaaata CD 301 aataattgtc atttagagag aataatttat ggaggtataa actacagaga CD 351 aggaagagat gagatatcga ggagatattt gcattctttc atgaaaaatt CD 401 tctctattcc tttgaattac cctttttcta caaagaaagg acgagaaaga CD 451 tatacaaata acttactaag acaaaaaaaa catatttggg tttttaaacg CD 501 gaatctatta gggaaaaaat atataaaacc tgtatatgac aagattgatt CD 551 tctataattt tgaagaatgg aaaactctaa ttataaaaga aattcttcct CD 601 agttggaaaa tttctaatca gtccatagat aaggctaata ttttattgga CD 651 agataagaat atagaagatt taaagcattt ctttgaatta tatgttgatg CD 701 atataattcg tagagactat cattggaaaa actctctaga cattatctct CD 751 tatcgtgata gaaagaacca ggttaatttc aatttgaaga ataatttgga CD 801 attcttagat aaaaaattat tttattgtct tatatctgct ttttgtgaaa CD 851 aagttttatc tgaagtagaa ggtccattta aacataaaag aatcaaatca CD 901 actttcaatt tgaaaaatat tgaagatttt tcggatttcg aagtaactaa CD 951 taaagaaata ttcaaatggg aactacactg gtggaagaaa aaaatctttc CD 1001 aatttttaga taaaaatcat gaatctgatT agagtatagc caaatctttt CD 1051 acttttttcc aaaataagag gtttctcttt ctcgaaaatt atgctgaatt CD 1101 ttatacatgg ctactctacg aggattcccc ctttcatttg aaaaagaata CD 1151 agcaactttt ggatactgcc aaagatacgt ttaaagaaga ttcttttcaa CD 1201 ttaaatgata gaagaaatca aatttattct tttgaaaata aaggtatatt CD 1251 tctgaatatt ctacataatt tttcgattta tgtttcaaat aaagtaagaa CD 1301 aattgaatca tttaaaaata ttttctgata tatctataaa aaattcatat CD 1351 ttgattaata aaaatttagt atatcatgga aaaggaagtg gtggaacaat CD 1401 ctatgaagat gagaaacaaa aaacttggga cactacagat ttctatttga CD 1451 aaagggagaa atatttcatt tctaagacag attttctttc tcgttctata CD 1501 gagaagaaat gtttcaaatc taataaatac tttttagatt tgtttttaaa CD 1551 tagaggagat actaataaga ggagtacgac agaatcaaat attcattctt CD 1601 acgatctttc ttctcttact aaagcaaaac gaaaagaagt gaaatctggt CD 1651 tcctcttacg aatttctcga aaaagattct ttcttttttc tgatgaaaga CD 1701 gaattttgtc aaagatttta agtctatcac aaaagatttt ttctccaata CD 1751 gagaaaaaaa aatgactgat tattttccaa aattgattaa ttatgctttt CD 1801 ttggacatat cgtcaataga tgaatctaat atgagttttc atataactgg CD 1851 aagacattta aaagattttc cattaaatga gtggcgaact aatatcccgt CD 1901 caagaaatta catgctatca gatattagta gaatgattaa tctatcgaag CD 1951 ataagaaaaa aatttcaaaa cgtttttttt gtttcttcaa tatcaagtaa CD 2001 gaggattcgg caaaataaaa attcaaacga tttttattta atttcactta CD 2051 taaaactgaa tttgtcttgg aatcgccctt atttatgttg gtcaaccctt CD 2101 tacaaatgca acaaacaata catattcaat aggtatctca aattgaagga CD 2151 aagattcatg agaggagtag aacaattaaa tttattaatc actaaaccta CD 2201 atcagaatta tgataaaata ctttattttT aggtggaaag tgaaataggt CD 2251 aaatttcata aatcaaaaga aaatgaatta aattataatt ttttttttcc CD 2301 tttgttgaat ggtattaatg aagatgataa atttcttaat gaaatgtttc CD 2351 acaaaaaagt agaagctcat tctgaagaaa attttgaaac ctatatctac CD 2401 ccaacgaatc ataggaagaa attaaaattg tggtacgagt taaataaagg CD 2451 aagttacata tgcctcgata atgtagtaaa aaaatattac tctatatata CD 2501 aattaaagtt ttatttaata aatagaatga agaaactttg ggtagaaagg CD 2551 atagagaatg gaaattcaag taactttata Tgaaatatag tcaacggaca CD 2601 ttcatccaat tggaaaataa atgggagaga atggtctgat tataatatca CD 2651 aacgtgacaa atatattaat tggaattcgt acatatataa atggtttgat CD 2701 aggactaaaa atttgcaaat ttttcctaat tggttttctg ataatacttc CD 2751 aaggagatgg ttcaatgaaa taagatttat caaacctgat atttttatga CD 2801 cgtaccctaa aaaacttgag aagaattatt attcgaaagt ctatttcatt CD 2851 tttaatactt catcaaattc cctattagaa tctatttcta aaaaaaagaa CD 2901 tataaatttg agaggaagag ttttacataa ttataaaaaa ttatcacgag CD 2951 attcagaaaa attgattaag aataaattgc taccagaatc atttcttaat CD 3001 aaaaatttaa taaagaatat tattatttct ctttttaata atgaaaaaaa CD 3051 tcatgatatt tttagagaat ttcctagaaa aactttttct ctttggatat CD 3101 ataagaatcg aaataatggc ttcaattcaa tcaataattt tcaaaaaaat CD 3151 ttgatgatga attttcataa cactaatacc atagaatttc tagattattt CD 3201 acatgacttt cattttagat acgacaaaag attacccttt tttatgaaag CD 3251 aaattcatat taaaaattac gattctacat ataataaatt tttaagaatt CD 3301 ttgcctatat atagtaatct tcgttctctg tctatcaata aaataaaacc CD 3351 attttttttt caatcgagaa tagatattac tctatctatt Taattacaag CD 3401 tgtttaacga ttcattatct aattatttag gaagaacttg taactatatt CD 3451 tttacttctt tcactaatca cctatataaa ttgttgaatc tattaatcaa CD 3501 gattaattca tctatttaca aagaaacaga tagttgttcc atccaaaaat CD 3551 ttttagctat gactccttcg gggccaacga tactgaattt aaaaataact CD 3601 cattatgatg aattcttttt gggagaatta acaagtaact tcaatggata CD 3651 ctttgaattt tcttccgaac caaatctaag tcataccgaa attcaatctt CD 3701 ataaaaatga attattgtct gaatttctta ttgaatttcg gaataagaat CD 3751 aataggaaac ttTaatggat caaggaatca tttctgaagt taaatttaaa CD 3801 agaaaatttt aaatatgtta ttggaggaga atctatagat agaataagca CD 3851 taaatctaga tttctatgaa aagaataaga atatattacc ctatccttca CD 3901 ttaagcataa ctgatttttt tgataaagat gataaaatta aagtgtctaa CD 3951 aaaactttat ttcttggaga aatggaattt ctttcaaaat tacacttcat CD 4001 ggtttttcac gtttgaatgg tggaggtatt tcagtaatat acccctagaa CD 4051 acgttcccag aagtattact aaatattact gatcaatcta aatatatttc CD 4101 atataagact acgcaatata tagaagaaat tttgaaagat ttatggaaaa CD 4151 atctaaattt tattttccaa actaatattc taaggaaaat taatataaat CD 4201 tcagaaatac gtttattgaa acaaattaat aatgagcaac atgaatcaat CD 4251 atttatatat atatggtcac atttccaatt tattaatctt tcgaatgcta CD 4301 tatatttaac tttaataagc ttatctgttt cttgcttttt agtctctgaa CD 4351 aattacttct ctactttgat aggtttagat tatatcgatt catggagacg CD 4401 cttcaaagta attgaatact taagagatcc attgagagga tcttacttag CD 4451 tagaaagatg gatatatgga aatcaaactc aaatcattag aacggaaaat CD 4501 tttttcatgc ttcttctgaa aaattttatc cattatataa aaaatggaag CD 4551 atttttctta tttaccagaa aaaaattgga tacatggtta tttcatagta CD 4601 gaactttaga cctttctaga agaaaaaaag atttactagt taaatctgta CD 4651 atcacggaaa gaagtctttc gcaatataga ttgaatttaa atttaaatca CD 4701 taatttaaga aattacgatt tcggttataa aatctctgaa aaaccgggat CD 4751 tttattattt gagatattta gcagaaactt atcagaaaga tttagtcaat CD 4801 cattcttttt attcttctca cttagctgaa aaatggattt tactagcttt CD 4851 ttggaaagga atgatctctt cacagaaatt gtggcaaacg aaaatactga CD 4901 atcacgaatc ttacagaata ccaattccat tcgaattgga tttattttct CD 4951 tctaaaggaa ttttacttgt aggtcctacg gaaataggaa aatcttactt CD 5001 aataaaaaat ttagcggcag attcttatgt tcctttaata aaaatatcta CD 5051 tcagcaaacC tttgtataac aaaccagatg ttataactga aagttggata CD 5101 aatattttga tggaaagtct tcaaagatta actcttattt tggaattagc CD 5151 aaaaaaaatg tccccctgta taatatggat tcaagatatc catgagttaa CD 5201 atgtgaatcg ttcaaccgaa aatgtagaat ctgatccgac ttCtttactt CD 5251 ggtatcttat tgaaatattt ccatactgaa tttattagca aaagtaccaa CD 5301 aggtataata attatcggtt ctactcatct tcctagaaaa gttgatccag CD 5351 ctttaatttc tccaaataga ttggataaat tgatgaatat acgaataatt CD 5401 gatatatttg aaTgacaaga aaaattttct attcttctac atagtaaacg CD 5451 tttttatttt aaaaataagt tgcttcattt taacgagttt gcatatagaa CD 5501 ctatgggtta taatggaaga gatttagtag cacttgctaa cgaagtttca CD 5551 ttaattaata ctactcaggg taattcaact atttacattg atgcagtaag CD 5601 attagcgctc catagacaaa ctttaggttt tacatatatc aataatcaaa CD 5651 tgttattttg tcagaatgaa ggagtacttc ttcataaaat aggaaaagct CD 5701 gttatacaaa atatatttat aaaaattttt cctatgaatc ctttatatat CD 5751 aggtagtgac ttatggaaga agaagtttta ttatttgtcc gaatggtttt CD 5801 tggaaccttc tgtgaccgaa cccaccataa aggaattaac tttattatct CD 5851 tatattctcg gttgcttagc tggattagca gctggagatt cctggtctat CD 5901 tttagaacat gaaccagaaa atttaattcc tctcaataaa tttattgaga CD 5951 atgatttcga tttagcttgt ggtatttcag aaagtttcct agtagagttt CD 6001 tcttggttag aaatatttca agatgaatct attaataatg aaatcgaatt CD 6051 ttttcctaaa attggggcaa gacatttctt gaatatgatg caaagaggaa CD 6101 tttcttccac gacaagtgga aaattcatgt ataaacaaga tggactacga CD 6151 aatagatcta tatttaagaa aacggttcag tataaggaaa agctatatga CD 6201 attagcaagt gaaacaactt gggctcctaa aatatggcgt cttagtttca CD 6251 tcagaactaa atcattcgat tggataggaa gacccaatga ttttgaatct CD 6301 ttgtatagct tctggtttct cagagaaaaa gaacaaactt tttccgtttc CD 6351 tgaaaattca cgagaaattt ttcattccag tcaggttgcg cagtacaaaa CD 6401 caaaagaaga actcccttat gaaagaattc tatctagaat aagacggagg CD 6451 aatgtggagg aattagagtc tTaattaggt tttattttat cggaagatca CD 6501 atttaaaata ttaggatttc ccgaattatc tacgcaatat agaatagaat CD 6551 atgaattatt tcaaaaacca atgttgttta tgggaggacg attcatttgg CD 6601 gatcccacca gtctatcatt tgaaactcgt tactctgttt tttcacgccg CD 6651 agaattattc atagatgaag aaatgcgaag aagactttat gttacttatg CD 6701 gggcaagacg cgagcgagaa agatctcgtt caagtcaaaa gatcaaacag CD 6751 ttttttcttc gttgcggata tggtcgagat ttcatgaata attcatctat CD 6801 tggttggtgg aatggactat ttcttacaga gaaatataat attgagatct CD 6851 ttaaacgcat cgaagaaatt agtgttcaat tgaagcatcc cgaagtattt CD 6901 actcctgtat atttgtatTa aagttggttg attgaaaatt cgagagagaa CD 6951 actttcccgt tttgacttat tgaatcatcg cgaaagatgg atcaaattga CD 7001 ataataaatc attccattat ttttccattc atagtacttt attagaaagt CD 7051 tataactatt tattgaattt ctttatatcg aacagaatat tattagatga CD 7101 aatgacaaaa atgttattaa aagatggatg gctctttcaa aatgaaattg CD 7151 aacattttat ttgtaaaatg aagaaataa FT EDITED CDNA CD 1 atgaaacaga aattattaga aaacaaattt tcatacagga aattcaaatt CD 51 agaagaaata aagaaatatg aatatttatt aaattcatgt attaactgga CD 101 atttaatcaa attagtaact ggaattcctt ccaatcggga acatctcatt CD 151 aagctctttg acttacgaat tcttagttca ttaattttac gcgatttacg CD 201 taagtcagaa atgaaaaaaa gtttaatact taagagtttt ccactactta CD 251 tactatctat gtttatacat cgtatgaata gtaggaatat tgttgaaata CD 301 aataattgtc atttagagag aataatttat ggaggtataa actacagaga CD 351 aggaagagat gagatatcga ggagatattt gcattctttc atgaaaaatt CD 401 tctctattcc tttgaattac cctttttcta caaagaaagg acgagaaaga CD 451 tatacaaata acttactaag acaaaaaaaa catatttggg tttttaaacg CD 501 gaatctatta gggaaaaaat atataaaacc tgtatatgac aagattgatt CD 551 tctataattt tgaagaatgg aaaactctaa ttataaaaga aattcttcct CD 601 agttggaaaa tttctaatca gtccatagat aaggctaata ttttattgga CD 651 agataagaat atagaagatt taaagcattt ctttgaatta tatgttgatg CD 701 atataattcg tagagactat cattggaaaa actctctaga cattatctct CD 751 tatcgtgata gaaagaacca ggttaatttc aatttgaaga ataatttgga CD 801 attcttagat aaaaaattat tttattgtct tatatctgct ttttgtgaaa CD 851 aagttttatc tgaagtagaa ggtccattta aacataaaag aatcaaatca CD 901 actttcaatt tgaaaaatat tgaagatttt tcggatttcg aagtaactaa CD 951 taaagaaata ttcaaatggg aactacactg gtggaagaaa aaaatctttc CD 1001 aatttttaga taaaaatcat gaatctgatC agagtatagc caaatctttt CD 1051 acttttttcc aaaataagag gtttctcttt ctcgaaaatt atgctgaatt CD 1101 ttatacatgg ctactctacg aggattcccc ctttcatttg aaaaagaata CD 1151 agcaactttt ggatactgcc aaagatacgt ttaaagaaga ttcttttcaa CD 1201 ttaaatgata gaagaaatca aatttattct tttgaaaata aaggtatatt CD 1251 tctgaatatt ctacataatt tttcgattta tgtttcaaat aaagtaagaa CD 1301 aattgaatca tttaaaaata ttttctgata tatctataaa aaattcatat CD 1351 ttgattaata aaaatttagt atatcatgga aaaggaagtg gtggaacaat CD 1401 ctatgaagat gagaaacaaa aaacttggga cactacagat ttctatttga CD 1451 aaagggagaa atatttcatt tctaagacag attttctttc tcgttctata CD 1501 gagaagaaat gtttcaaatc taataaatac tttttagatt tgtttttaaa CD 1551 tagaggagat actaataaga ggagtacgac agaatcaaat attcattctt CD 1601 acgatctttc ttctcttact aaagcaaaac gaaaagaagt gaaatctggt CD 1651 tcctcttacg aatttctcga aaaagattct ttcttttttc tgatgaaaga CD 1701 gaattttgtc aaagatttta agtctatcac aaaagatttt ttctccaata CD 1751 gagaaaaaaa aatgactgat tattttccaa aattgattaa ttatgctttt CD 1801 ttggacatat cgtcaataga tgaatctaat atgagttttc atataactgg CD 1851 aagacattta aaagattttc cattaaatga gtggcgaact aatatcccgt CD 1901 caagaaatta catgctatca gatattagta gaatgattaa tctatcgaag CD 1951 ataagaaaaa aatttcaaaa cgtttttttt gtttcttcaa tatcaagtaa CD 2001 gaggattcgg caaaataaaa attcaaacga tttttattta atttcactta CD 2051 taaaactgaa tttgtcttgg aatcgccctt atttatgttg gtcaaccctt CD 2101 tacaaatgca acaaacaata catattcaat aggtatctca aattgaagga CD 2151 aagattcatg agaggagtag aacaattaaa tttattaatc actaaaccta CD 2201 atcagaatta tgataaaata ctttattttC aggtggaaag tgaaataggt CD 2251 aaatttcata aatcaaaaga aaatgaatta aattataatt ttttttttcc CD 2301 tttgttgaat ggtattaatg aagatgataa atttcttaat gaaatgtttc CD 2351 acaaaaaagt agaagctcat tctgaagaaa attttgaaac ctatatctac CD 2401 ccaacgaatc ataggaagaa attaaaattg tggtacgagt taaataaagg CD 2451 aagttacata tgcctcgata atgtagtaaa aaaatattac tctatatata CD 2501 aattaaagtt ttatttaata aatagaatga agaaactttg ggtagaaagg CD 2551 atagagaatg gaaattcaag taactttata Cgaaatatag tcaacggaca CD 2601 ttcatccaat tggaaaataa atgggagaga atggtctgat tataatatca CD 2651 aacgtgacaa atatattaat tggaattcgt acatatataa atggtttgat CD 2701 aggactaaaa atttgcaaat ttttcctaat tggttttctg ataatacttc CD 2751 aaggagatgg ttcaatgaaa taagatttat caaacctgat atttttatga CD 2801 cgtaccctaa aaaacttgag aagaattatt attcgaaagt ctatttcatt CD 2851 tttaatactt catcaaattc cctattagaa tctatttcta aaaaaaagaa CD 2901 tataaatttg agaggaagag ttttacataa ttataaaaaa ttatcacgag CD 2951 attcagaaaa attgattaag aataaattgc taccagaatc atttcttaat CD 3001 aaaaatttaa taaagaatat tattatttct ctttttaata atgaaaaaaa CD 3051 tcatgatatt tttagagaat ttcctagaaa aactttttct ctttggatat CD 3101 ataagaatcg aaataatggc ttcaattcaa tcaataattt tcaaaaaaat CD 3151 ttgatgatga attttcataa cactaatacc atagaatttc tagattattt CD 3201 acatgacttt cattttagat acgacaaaag attacccttt tttatgaaag CD 3251 aaattcatat taaaaattac gattctacat ataataaatt tttaagaatt CD 3301 ttgcctatat atagtaatct tcgttctctg tctatcaata aaataaaacc CD 3351 attttttttt caatcgagaa tagatattac tctatctatt Caattacaag CD 3401 tgtttaacga ttcattatct aattatttag gaagaacttg taactatatt CD 3451 tttacttctt tcactaatca cctatataaa ttgttgaatc tattaatcaa CD 3501 gattaattca tctatttaca aagaaacaga tagttgttcc atccaaaaat CD 3551 ttttagctat gactccttcg gggccaacga tactgaattt aaaaataact CD 3601 cattatgatg aattcttttt gggagaatta acaagtaact tcaatggata CD 3651 ctttgaattt tcttccgaac caaatctaag tcataccgaa attcaatctt CD 3701 ataaaaatga attattgtct gaatttctta ttgaatttcg gaataagaat CD 3751 aataggaaac ttCaatggat caaggaatca tttctgaagt taaatttaaa CD 3801 agaaaatttt aaatatgtta ttggaggaga atctatagat agaataagca CD 3851 taaatctaga tttctatgaa aagaataaga atatattacc ctatccttca CD 3901 ttaagcataa ctgatttttt tgataaagat gataaaatta aagtgtctaa CD 3951 aaaactttat ttcttggaga aatggaattt ctttcaaaat tacacttcat CD 4001 ggtttttcac gtttgaatgg tggaggtatt tcagtaatat acccctagaa CD 4051 acgttcccag aagtattact aaatattact gatcaatcta aatatatttc CD 4101 atataagact acgcaatata tagaagaaat tttgaaagat ttatggaaaa CD 4151 atctaaattt tattttccaa actaatattc taaggaaaat taatataaat CD 4201 tcagaaatac gtttattgaa acaaattaat aatgagcaac atgaatcaat CD 4251 atttatatat atatggtcac atttccaatt tattaatctt tcgaatgcta CD 4301 tatatttaac tttaataagc ttatctgttt cttgcttttt agtctctgaa CD 4351 aattacttct ctactttgat aggtttagat tatatcgatt catggagacg CD 4401 cttcaaagta attgaatact taagagatcc attgagagga tcttacttag CD 4451 tagaaagatg gatatatgga aatcaaactc aaatcattag aacggaaaat CD 4501 tttttcatgc ttcttctgaa aaattttatc cattatataa aaaatggaag CD 4551 atttttctta tttaccagaa aaaaattgga tacatggtta tttcatagta CD 4601 gaactttaga cctttctaga agaaaaaaag atttactagt taaatctgta CD 4651 atcacggaaa gaagtctttc gcaatataga ttgaatttaa atttaaatca CD 4701 taatttaaga aattacgatt tcggttataa aatctctgaa aaaccgggat CD 4751 tttattattt gagatattta gcagaaactt atcagaaaga tttagtcaat CD 4801 cattcttttt attcttctca cttagctgaa aaatggattt tactagcttt CD 4851 ttggaaagga atgatctctt cacagaaatt gtggcaaacg aaaatactga CD 4901 atcacgaatc ttacagaata ccaattccat tcgaattgga tttattttct CD 4951 tctaaaggaa ttttacttgt aggtcctacg gaaataggaa aatcttactt CD 5001 aataaaaaat ttagcggcag attcttatgt tcctttaata aaaatatcta CD 5051 tcagcaaacT tttgtataac aaaccagatg ttataactga aagttggata CD 5101 aatattttga tggaaagtct tcaaagatta actcttattt tggaattagc CD 5151 aaaaaaaatg tccccctgta taatatggat tcaagatatc catgagttaa CD 5201 atgtgaatcg ttcaaccgaa aatgtagaat ctgatccgac ttTtttactt CD 5251 ggtatcttat tgaaatattt ccatactgaa tttattagca aaagtaccaa CD 5301 aggtataata attatcggtt ctactcatct tcctagaaaa gttgatccag CD 5351 ctttaatttc tccaaataga ttggataaat tgatgaatat acgaataatt CD 5401 gatatatttg aaCgacaaga aaaattttct attcttctac atagtaaacg CD 5451 tttttatttt aaaaataagt tgcttcattt taacgagttt gcatatagaa CD 5501 ctatgggtta taatggaaga gatttagtag cacttgctaa cgaagtttca CD 5551 ttaattaata ctactcaggg taattcaact atttacattg atgcagtaag CD 5601 attagcgctc catagacaaa ctttaggttt tacatatatc aataatcaaa CD 5651 tgttattttg tcagaatgaa ggagtacttc ttcataaaat aggaaaagct CD 5701 gttatacaaa atatatttat aaaaattttt cctatgaatc ctttatatat CD 5751 aggtagtgac ttatggaaga agaagtttta ttatttgtcc gaatggtttt CD 5801 tggaaccttc tgtgaccgaa cccaccataa aggaattaac tttattatct CD 5851 tatattctcg gttgcttagc tggattagca gctggagatt cctggtctat CD 5901 tttagaacat gaaccagaaa atttaattcc tctcaataaa tttattgaga CD 5951 atgatttcga tttagcttgt ggtatttcag aaagtttcct agtagagttt CD 6001 tcttggttag aaatatttca agatgaatct attaataatg aaatcgaatt CD 6051 ttttcctaaa attggggcaa gacatttctt gaatatgatg caaagaggaa CD 6101 tttcttccac gacaagtgga aaattcatgt ataaacaaga tggactacga CD 6151 aatagatcta tatttaagaa aacggttcag tataaggaaa agctatatga CD 6201 attagcaagt gaaacaactt gggctcctaa aatatggcgt cttagtttca CD 6251 tcagaactaa atcattcgat tggataggaa gacccaatga ttttgaatct CD 6301 ttgtatagct tctggtttct cagagaaaaa gaacaaactt tttccgtttc CD 6351 tgaaaattca cgagaaattt ttcattccag tcaggttgcg cagtacaaaa CD 6401 caaaagaaga actcccttat gaaagaattc tatctagaat aagacggagg CD 6451 aatgtggagg aattagagtc tCaattaggt tttattttat cggaagatca CD 6501 atttaaaata ttaggatttc ccgaattatc tacgcaatat agaatagaat CD 6551 atgaattatt tcaaaaacca atgttgttta tgggaggacg attcatttgg CD 6601 gatcccacca gtctatcatt tgaaactcgt tactctgttt tttcacgccg CD 6651 agaattattc atagatgaag aaatgcgaag aagactttat gttacttatg CD 6701 gggcaagacg cgagcgagaa agatctcgtt caagtcaaaa gatcaaacag CD 6751 ttttttcttc gttgcggata tggtcgagat ttcatgaata attcatctat CD 6801 tggttggtgg aatggactat ttcttacaga gaaatataat attgagatct CD 6851 ttaaacgcat cgaagaaatt agtgttcaat tgaagcatcc cgaagtattt CD 6901 actcctgtat atttgtatCa aagttggttg attgaaaatt cgagagagaa CD 6951 actttcccgt tttgacttat tgaatcatcg cgaaagatgg atcaaattga CD 7001 ataataaatc attccattat ttttccattc atagtacttt attagaaagt CD 7051 tataactatt tattgaattt ctttatatcg aacagaatat tattagatga CD 7101 aatgacaaaa atgttattaa aagatggatg gctctttcaa aatgaaattg CD 7151 aacattttat ttgtaaaatg aagaaataa SQ SEQUENCE 2393 AA; MKQKLLENKF SYRKFKLEEI KKYEYLLNSC INWNLIKLVT GIPSNREHLI KLFDLRILSS LILRDLRKSE MKKSLILKSF PLLILSMFIH RMNSRNIVEI NNCHLERIIY GGINYREGRD EISRRYLHSF MKNFSIPLNY PFSTKKGRER YTNNLLRQKK HIWVFKRNLL GKKYIKPVYD KIDFYNFEEW KTLIIKEILP SWKISNQSID KANILLEDKN IEDLKHFFEL YVDDIIRRDY HWKNSLDIIS YRDRKNQVNF NLKNNLEFLD KKLFYCLISA FCEKVLSEVE GPFKHKRIKS TFNLKNIEDF SDFEVTNKEI FKWELHWWKK KIFQFLDKNH ESDQSIAKSF TFFQNKRFLF LENYAEFYTW LLYEDSPFHL KKNKQLLDTA KDTFKEDSFQ LNDRRNQIYS FENKGIFLNI LHNFSIYVSN KVRKLNHLKI FSDISIKNSY LINKNLVYHG KGSGGTIYED EKQKTWDTTD FYLKREKYFI SKTDFLSRSI EKKCFKSNKY FLDLFLNRGD TNKRSTTESN IHSYDLSSLT KAKRKEVKSG SSYEFLEKDS FFFLMKENFV KDFKSITKDF FSNREKKMTD YFPKLINYAF LDISSIDESN MSFHITGRHL KDFPLNEWRT NIPSRNYMLS DISRMINLSK IRKKFQNVFF VSSISSKRIR QNKNSNDFYL ISLIKLNLSW NRPYLCWSTL YKCNKQYIFN RYLKLKERFM RGVEQLNLLI TKPNQNYDKI LYFQVESEIG KFHKSKENEL NYNFFFPLLN GINEDDKFLN EMFHKKVEAH SEENFETYIY PTNHRKKLKL WYELNKGSYI CLDNVVKKYY SIYKLKFYLI NRMKKLWVER IENGNSSNFI RNIVNGHSSN WKINGREWSD YNIKRDKYIN WNSYIYKWFD RTKNLQIFPN WFSDNTSRRW FNEIRFIKPD IFMTYPKKLE KNYYSKVYFI FNTSSNSLLE SISKKKNINL RGRVLHNYKK LSRDSEKLIK NKLLPESFLN KNLIKNIIIS LFNNEKNHDI FREFPRKTFS LWIYKNRNNG FNSINNFQKN LMMNFHNTNT IEFLDYLHDF HFRYDKRLPF FMKEIHIKNY DSTYNKFLRI LPIYSNLRSL SINKIKPFFF QSRIDITLSI QLQVFNDSLS NYLGRTCNYI FTSFTNHLYK LLNLLIKINS SIYKETDSCS IQKFLAMTPS GPTILNLKIT HYDEFFLGEL TSNFNGYFEF SSEPNLSHTE IQSYKNELLS EFLIEFRNKN NRKLQWIKES FLKLNLKENF KYVIGGESID RISINLDFYE KNKNILPYPS LSITDFFDKD DKIKVSKKLY FLEKWNFFQN YTSWFFTFEW WRYFSNIPLE TFPEVLLNIT DQSKYISYKT TQYIEEILKD LWKNLNFIFQ TNILRKININ SEIRLLKQIN NEQHESIFIY IWSHFQFINL SNAIYLTLIS LSVSCFLVSE NYFSTLIGLD YIDSWRRFKV IEYLRDPLRG SYLVERWIYG NQTQIIRTEN FFMLLLKNFI HYIKNGRFFL FTRKKLDTWL FHSRTLDLSR RKKDLLVKSV ITERSLSQYR LNLNLNHNLR NYDFGYKISE KPGFYYLRYL AETYQKDLVN HSFYSSHLAE KWILLAFWKG MISSQKLWQT KILNHESYRI PIPFELDLFS SKGILLVGPT EIGKSYLIKN LAADSYVPLI KISISKLLYN KPDVITESWI NILMESLQRL TLILELAKKM SPCIIWIQDI HELNVNRSTE NVESDPTFLL GILLKYFHTE FISKSTKGII IIGSTHLPRK VDPALISPNR LDKLMNIRII DIFERQEKFS ILLHSKRFYF KNKLLHFNEF AYRTMGYNGR DLVALANEVS LINTTQGNST IYIDAVRLAL HRQTLGFTYI NNQMLFCQNE GVLLHKIGKA VIQNIFIKIF PMNPLYIGSD LWKKKFYYLS EWFLEPSVTE PTIKELTLLS YILGCLAGLA AGDSWSILEH EPENLIPLNK FIENDFDLAC GISESFLVEF SWLEIFQDES INNEIEFFPK IGARHFLNMM QRGISSTTSG KFMYKQDGLR NRSIFKKTVQ YKEKLYELAS ETTWAPKIWR LSFIRTKSFD WIGRPNDFES LYSFWFLREK EQTFSVSENS REIFHSSQVA QYKTKEELPY ERILSRIRRR NVEELESQLG FILSEDQFKI LGFPELSTQY RIEYELFQKP MLFMGGRFIW DPTSLSFETR YSVFSRRELF IDEEMRRRLY VTYGARRERE RSRSSQKIKQ FFLRCGYGRD FMNNSSIGWW NGLFLTEKYN IEIFKRIEEI SVQLKHPEVF TPVYLYQSWL IENSREKLSR FDLLNHRERW IKLNNKSFHY FSIHSTLLES YNYLLNFFIS NRILLDEMTK MLLKDGWLFQ NEIEHFICKM KK* // ID AB086179_22 STANDARD; PRT; 382 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : cysA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55343.1 FT PROTEIN_NAME : sulfate transport ATP-binding protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 43571 - 44716 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 4 P(cCt) -> L(cTt) FT EDITING : 18 P(cCg) -> L(cTg) FT EDITING : 33 F(Ttt) -> L(Ctt) FT EDITING : 34 S(tCa) -> L(tTa) FT EDITING : 72 *(Taa) -> Q(Caa) FT EDITING : 80 S(tCt) -> F(tTt) FT EDITING : 86 S(tCc) -> F(tTc) FT EDITING : 95 T(aCt) -> I(aTt) FT EDITING : 121 *(Tga) -> R(Cga) FT EDITING : 123 P(Cca) -> S(Tca) FT EDITING : 154 P(cCt) -> L(cTt) FT EDITING : 155 S(tCa) -> L(tTa) FT EDITING : 156 P(CCg) -> L(TTg) FT EDITING : 163 S(tCa) -> L(tTa) FT EDITING : 168 *(Tga) -> R(Cga) FT EDITING : 193 *(Taa) -> Q(Caa) FT EDITING : 196 V(gTt) -> A(gCt) FT EDITING : 233 P(Cca) -> S(Tca) FT EDITING : 295 L(cTt) -> P(cCt) FT EDITING : 346 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 1146 NT; CD 1 aCgagtattc Ctgtgtatga agtttccaaa tcactaggta atttaaaagt CD 51 tcCggatcga gtaagtttat atgttcgtaa agtttctttg gtagctTttt CD 101 Caggtccctc aggttcagga aaatcaagtt tgttacgaat aatagcgggt CD 151 cttgacagtc ctgattacgg aagtgtatgg ttgcatggta cagatatgac CD 201 taatacttct actTaatatc gacacatggc ttttgtttCt caacattatg CD 251 ctctttCcaa aaatatgact gtttatgaaa ataCttcttt tggacttcgt CD 301 ttaagaggat tttcctacca gaaaattaga aataaagtaa atgatttgtt CD 351 agattgtctt TgaattCcag acattgtgtc tgagtatccg ggaaaattat CD 401 cagggggaca gaaacaacgt gttgctcttg ctagaagtct ggctattaaa CD 451 tcagattttc CttCaCCgga cgagcctttt ggagcctCag atggagaatt CD 501 gTgaagacac cttagtaaat ggttaaagcg ttacttgaaa gacaatggaa CD 551 ttacaacaat tatggttact catgatTaaa aagaagTtat ttctatggct CD 601 gacgaaattg tggttttgaa gcaaggtcgt ttcttgcaac aaggaagatc CD 651 caaaaatctt tatgatgaac caattgatta ttttgttggt atttttCcag CD 701 gatcattcat tgaatttcct caattagaag aatctttgga tgctccactt CD 751 ggtagtagta gtagtagtag tagtagtact aaaaaatcca tggaaaaaga CD 801 tttcacgcca tttattcctg atctaatatg gtctcaaata tttactaatc CD 851 aatcgataca tcactatcat ttttttctaa gacTtcatga actgtatcta CD 901 gaatctcaaa tagatttgaa agcaatacct gttcaaataa aaaaaattat CD 951 ttataaaagg actttcgttc aattagattt atctataact ccttcttcat CD 1001 ggaacattac tattcccata ggttatcaag cctttTgaaa attaaatatt CD 1051 caatctttcg tgcagaagct ctatataaag cctagaaatc aagtttattt CD 1101 acgggcttat cccaagaaaa aaaacatcat tagtaaacaa atctaa FT EDITED CDNA CD 1 aTgagtattc Ttgtgtatga agtttccaaa tcactaggta atttaaaagt CD 51 tcTggatcga gtaagtttat atgttcgtaa agtttctttg gtagctCttt CD 101 Taggtccctc aggttcagga aaatcaagtt tgttacgaat aatagcgggt CD 151 cttgacagtc ctgattacgg aagtgtatgg ttgcatggta cagatatgac CD 201 taatacttct actCaatatc gacacatggc ttttgtttTt caacattatg CD 251 ctctttTcaa aaatatgact gtttatgaaa ataTttcttt tggacttcgt CD 301 ttaagaggat tttcctacca gaaaattaga aataaagtaa atgatttgtt CD 351 agattgtctt CgaattTcag acattgtgtc tgagtatccg ggaaaattat CD 401 cagggggaca gaaacaacgt gttgctcttg ctagaagtct ggctattaaa CD 451 tcagattttc TttTaTTgga cgagcctttt ggagcctTag atggagaatt CD 501 gCgaagacac cttagtaaat ggttaaagcg ttacttgaaa gacaatggaa CD 551 ttacaacaat tatggttact catgatCaaa aagaagCtat ttctatggct CD 601 gacgaaattg tggttttgaa gcaaggtcgt ttcttgcaac aaggaagatc CD 651 caaaaatctt tatgatgaac caattgatta ttttgttggt atttttTcag CD 701 gatcattcat tgaatttcct caattagaag aatctttgga tgctccactt CD 751 ggtagtagta gtagtagtag tagtagtact aaaaaatcca tggaaaaaga CD 801 tttcacgcca tttattcctg atctaatatg gtctcaaata tttactaatc CD 851 aatcgataca tcactatcat ttttttctaa gacCtcatga actgtatcta CD 901 gaatctcaaa tagatttgaa agcaatacct gttcaaataa aaaaaattat CD 951 ttataaaagg actttcgttc aattagattt atctataact ccttcttcat CD 1001 ggaacattac tattcccata ggttatcaag cctttCgaaa attaaatatt CD 1051 caatctttcg tgcagaagct ctatataaag cctagaaatc aagtttattt CD 1101 acgggcttat cccaagaaaa aaaacatcat tagtaaacaa atctaa SQ SEQUENCE 382 AA; MSILVYEVSK SLGNLKVLDR VSLYVRKVSL VALLGPSGSG KSSLLRIIAG LDSPDYGSVW LHGTDMTNTS TQYRHMAFVF QHYALFKNMT VYENISFGLR LRGFSYQKIR NKVNDLLDCL RISDIVSEYP GKLSGGQKQR VALARSLAIK SDFLLLDEPF GALDGELRRH LSKWLKRYLK DNGITTIMVT HDQKEAISMA DEIVVLKQGR FLQQGRSKNL YDEPIDYFVG IFSGSFIEFP QLEESLDAPL GSSSSSSSST KKSMEKDFTP FIPDLIWSQI FTNQSIHHYH FFLRPHELYL ESQIDLKAIP VQIKKIIYKR TFVQLDLSIT PSSWNITIPI GYQAFRKLNI QSFVQKLYIK PRNQVYLRAY PKKKNIISKQ I* // ID AB086179_23 STANDARD; PRT; 354 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55344.1 FT PROTEIN_NAME : photosystem II D2 protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 50032 - 51093 FT DIRECTIONS : positive FT EDITING : 27 C(Tgc) -> R(Cgc) FT EDITING : 59 R(Cgg) -> W(Tgg) FT EDITING : 129 C(Tgc) -> R(Cgc) FT EDITING : 138 *(Taa) -> Q(Caa) FT EDITING : 147 S(tCt) -> F(tTt) FT EDITING : 180 S(tCt) -> F(tTt) FT EDITING : 187 *(Taa) -> Q(Caa) FT EDITING : 215 Y(Tat) -> H(Cat) FT EDITING : 263 P(Cct) -> S(Tct) FT EDITING : 312 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 1062 NT; CD 1 atgactatag ccattggaaa gtcttctgaa gaaccaaaag gtttatttga CD 51 tagtatggat gactggttaa gaagagatTg cttcgtattt gtaggttggt CD 101 ccggcttatt gctgtttcct tgtgcttatt ttgctttagg tggatggttt CD 151 acaggtacga ctttcgtaac ttcaCggtat actcatggat tagctagttc CD 201 ttacttagag ggctgtaatt tcttgaccgc cgcggtttct acccctgcta CD 251 atagtttagc acattctcta ttgcttctat ggggtcctga agcacaagga CD 301 gatttcactc gttggtgcca actaggcggt ctatggacct ttgtggctct CD 351 ccatggtgct tttggtttaa taggcttcat gttaTgccaa ttcgaactag CD 401 ctagatctgt gTaattacgt ccttataatg ccattgcatC ttctggtcca CD 451 attgcagttt ttgtttccgt attcttgatc tatcctttgg gtcagtctgg CD 501 ttggtttttt gcacccagtt tcggtgtagc agctatctCt cgattcattc CD 551 ttttcttcTa aggtttccat aactggactt taaacccgtt tcatatgatg CD 601 ggagttgctg gagttttagg tgctgcttta ttatgtgcta ttTatggggc CD 651 tacagtggag aatactttgt ttgaggatgg tgatggtgca aatacattcc CD 701 gtgctttcaa cccaactcaa tctgaagaaa cttattctat ggtaactgct CD 751 aatagatttt ggtctcagat cttcggtgtt gctttcCcta acaagcgttg CD 801 gttacacttt ttcatgttat tcgtaccagt aactggttta tggatgagtg CD 851 ctattggagt cgttggttta gccttaaact tacgagcata tgattttgta CD 901 tctcaagaga ttcgtgcagc ggaggatcct gaatCtgaaa ctttctacac CD 951 taaaaatatt cttctgaatg aaggtattcg tgcttggatg gcggctcaag CD 1001 atcagcctca tgaaaacctt gtattccctg aggaggtatt accctgtgga CD 1051 aacgctcttt aa FT EDITED CDNA CD 1 atgactatag ccattggaaa gtcttctgaa gaaccaaaag gtttatttga CD 51 tagtatggat gactggttaa gaagagatCg cttcgtattt gtaggttggt CD 101 ccggcttatt gctgtttcct tgtgcttatt ttgctttagg tggatggttt CD 151 acaggtacga ctttcgtaac ttcaTggtat actcatggat tagctagttc CD 201 ttacttagag ggctgtaatt tcttgaccgc cgcggtttct acccctgcta CD 251 atagtttagc acattctcta ttgcttctat ggggtcctga agcacaagga CD 301 gatttcactc gttggtgcca actaggcggt ctatggacct ttgtggctct CD 351 ccatggtgct tttggtttaa taggcttcat gttaCgccaa ttcgaactag CD 401 ctagatctgt gCaattacgt ccttataatg ccattgcatT ttctggtcca CD 451 attgcagttt ttgtttccgt attcttgatc tatcctttgg gtcagtctgg CD 501 ttggtttttt gcacccagtt tcggtgtagc agctatctTt cgattcattc CD 551 ttttcttcCa aggtttccat aactggactt taaacccgtt tcatatgatg CD 601 ggagttgctg gagttttagg tgctgcttta ttatgtgcta ttCatggggc CD 651 tacagtggag aatactttgt ttgaggatgg tgatggtgca aatacattcc CD 701 gtgctttcaa cccaactcaa tctgaagaaa cttattctat ggtaactgct CD 751 aatagatttt ggtctcagat cttcggtgtt gctttcTcta acaagcgttg CD 801 gttacacttt ttcatgttat tcgtaccagt aactggttta tggatgagtg CD 851 ctattggagt cgttggttta gccttaaact tacgagcata tgattttgta CD 901 tctcaagaga ttcgtgcagc ggaggatcct gaatTtgaaa ctttctacac CD 951 taaaaatatt cttctgaatg aaggtattcg tgcttggatg gcggctcaag CD 1001 atcagcctca tgaaaacctt gtattccctg aggaggtatt accctgtgga CD 1051 aacgctcttt aa SQ SEQUENCE 354 AA; MTIAIGKSSE EPKGLFDSMD DWLRRDRFVF VGWSGLLLFP CAYFALGGWF TGTTFVTSWY THGLASSYLE GCNFLTAAVS TPANSLAHSL LLLWGPEAQG DFTRWCQLGG LWTFVALHGA FGLIGFMLRQ FELARSVQLR PYNAIAFSGP IAVFVSVFLI YPLGQSGWFF APSFGVAAIF RFILFFQGFH NWTLNPFHMM GVAGVLGAAL LCAIHGATVE NTLFEDGDGA NTFRAFNPTQ SEETYSMVTA NRFWSQIFGV AFSNKRWLHF FMLFVPVTGL WMSAIGVVGL ALNLRAYDFV SQEIRAAEDP EFETFYTKNI LLNEGIRAWM AAQDQPHENL VFPEEVLPCG NAL* // ID AB086179_24 STANDARD; PRT; 474 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55345.1 FT PROTEIN_NAME : photosystem II 44 kDa protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 51041 - 52462 FT DIRECTIONS : positive FT EDITING : 12 P(ccT) -> P(ccC) FT EDITING : 56 Y(Tat) -> H(Cat) FT EDITING : 173 S(tCt) -> F(tTt) FT EDITING : 190 V(gTt) -> A(gCt) FT EDITING : 267 F(tTc) -> S(tCc) FT EDITING : 344 P(Cct) -> S(Tct) FT EDITING : 390 *(Tga) -> R(Cga) FT EDITING : 471 L(cTt) -> P(cCt) FT CODON_START : 1 CL CDNALEN 1422 NT; CD 1 atgaaaacct tgtattccct gaggaggtat tacccTgtgg aaacgctctt CD 51 taatggaact ttagctttgg gtggtcgtga tcaagaaacc actggtttcg CD 101 cttggtgggc tggtaatgct cgacttatca atttatctgg taaattatta CD 151 ggtgctcatg tagctTatgc tggcttgata gttttttggg ctggagcgat CD 201 gaatctattt gaagtggctc actttgtacc ggaaaaaccc atgtatgagc CD 251 agggattaat tttattgccg catctagcta ctttagggtg gggtgtaggt CD 301 cccggtggag aagttatcga tacttttcca tacttcgtat ctggtgtact CD 351 ccatttaatt tcgtccgcag ttttaggttt cggaggtatc tatcattctc CD 401 ttattggacc agaaacctta gaagaatctt ttccattctt tggttatgta CD 451 tggaaagata agaataaaat gactactatt ctaggtattc atcttgtttt CD 501 actaggtctt ggtgcttCtc tcctggtatt caaggcttca tttttcggag CD 551 gtgtatacga tacctgggTt cctggtggtg gagatgtaag agaaatcaca CD 601 aatcttacac ttagtccgag tattattttt gggtatttac tcaagtcacc CD 651 ttttggtgga gagggatgga ttgttagtgt ggataatttg gaagatataa CD 701 tcggcggaca tgtttggtta ggcttgattt gtatcctagg tggtatctgg CD 751 catatcttga ccaaaccctt tgcgtgggcc cgccgtgctt tagtatggtT CD 801 cggagaagcc tatctatctt atagtttagg cgctatttct gtttttggtt CD 851 tcattgcttg ttgctttgtt tggtttaata acacagctta tcctagtgaa CD 901 ttttatggtc ctactggtcc agaagcttct caagctcaag cttttacttt CD 951 tttggttaga gaccaacgcc tcggagctaa tgtaggttct gcccaaggac CD 1001 ctaccggttt aggtaaatat cttatgcgcC ctcctactgg agaaatcatt CD 1051 tttggaggag aaacaatgcg cttttgggat ctccgtgctc catggttgga CD 1101 acctctaaga ggtcccaatg gcttagattt gagtaagttg aagcaagata CD 1151 tacagccctg gcaggagTga cgttccgcag aatatatgac tcatgctcct CD 1201 ttgggttctt tgaattctgt aggtggagta gctactgaaa ttaatgcagt CD 1251 aaactatgtt tctccccgta gttggttagc cacctctcat tttgtattgg CD 1301 gattcttttt tttcgtaggt cacttgtggc acgccgggag agcacgtgca CD 1351 gctgcagctg gattcgaaaa agggattgat cgtgattccg aacctgttct CD 1401 ttctatgaca cTtcttaact ag FT EDITED CDNA CD 1 atgaaaacct tgtattccct gaggaggtat tacccCgtgg aaacgctctt CD 51 taatggaact ttagctttgg gtggtcgtga tcaagaaacc actggtttcg CD 101 cttggtgggc tggtaatgct cgacttatca atttatctgg taaattatta CD 151 ggtgctcatg tagctCatgc tggcttgata gttttttggg ctggagcgat CD 201 gaatctattt gaagtggctc actttgtacc ggaaaaaccc atgtatgagc CD 251 agggattaat tttattgccg catctagcta ctttagggtg gggtgtaggt CD 301 cccggtggag aagttatcga tacttttcca tacttcgtat ctggtgtact CD 351 ccatttaatt tcgtccgcag ttttaggttt cggaggtatc tatcattctc CD 401 ttattggacc agaaacctta gaagaatctt ttccattctt tggttatgta CD 451 tggaaagata agaataaaat gactactatt ctaggtattc atcttgtttt CD 501 actaggtctt ggtgcttTtc tcctggtatt caaggcttca tttttcggag CD 551 gtgtatacga tacctgggCt cctggtggtg gagatgtaag agaaatcaca CD 601 aatcttacac ttagtccgag tattattttt gggtatttac tcaagtcacc CD 651 ttttggtgga gagggatgga ttgttagtgt ggataatttg gaagatataa CD 701 tcggcggaca tgtttggtta ggcttgattt gtatcctagg tggtatctgg CD 751 catatcttga ccaaaccctt tgcgtgggcc cgccgtgctt tagtatggtC CD 801 cggagaagcc tatctatctt atagtttagg cgctatttct gtttttggtt CD 851 tcattgcttg ttgctttgtt tggtttaata acacagctta tcctagtgaa CD 901 ttttatggtc ctactggtcc agaagcttct caagctcaag cttttacttt CD 951 tttggttaga gaccaacgcc tcggagctaa tgtaggttct gcccaaggac CD 1001 ctaccggttt aggtaaatat cttatgcgcT ctcctactgg agaaatcatt CD 1051 tttggaggag aaacaatgcg cttttgggat ctccgtgctc catggttgga CD 1101 acctctaaga ggtcccaatg gcttagattt gagtaagttg aagcaagata CD 1151 tacagccctg gcaggagCga cgttccgcag aatatatgac tcatgctcct CD 1201 ttgggttctt tgaattctgt aggtggagta gctactgaaa ttaatgcagt CD 1251 aaactatgtt tctccccgta gttggttagc cacctctcat tttgtattgg CD 1301 gattcttttt tttcgtaggt cacttgtggc acgccgggag agcacgtgca CD 1351 gctgcagctg gattcgaaaa agggattgat cgtgattccg aacctgttct CD 1401 ttctatgaca cCtcttaact ag SQ SEQUENCE 474 AA; MKTLYSLRRY YPVETLFNGT LALGGRDQET TGFAWWAGNA RLINLSGKLL GAHVAHAGLI VFWAGAMNLF EVAHFVPEKP MYEQGLILLP HLATLGWGVG PGGEVIDTFP YFVSGVLHLI SSAVLGFGGI YHSLIGPETL EESFPFFGYV WKDKNKMTTI LGIHLVLLGL GAFLLVFKAS FFGGVYDTWA PGGGDVREIT NLTLSPSIIF GYLLKSPFGG EGWIVSVDNL EDIIGGHVWL GLICILGGIW HILTKPFAWA RRALVWSGEA YLSYSLGAIS VFGFIACCFV WFNNTAYPSE FYGPTGPEAS QAQAFTFLVR DQRLGANVGS AQGPTGLGKY LMRSPTGEII FGGETMRFWD LRAPWLEPLR GPNGLDLSKL KQDIQPWQER RSAEYMTHAP LGSLNSVGGV ATEINAVNYV SPRSWLATSH FVLGFFFFVG HLWHAGRARA AAAGFEKGID RDSEPVLSMT PLN* // ID AB086179_26 STANDARD; PRT; 101 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps14 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55347.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 54239 - 54541 FT DIRECTIONS : negative FT EDITING : 16 S(tCg) -> L(tTg) FT EDITING : 83 P(cCa) -> L(cTa) FT EDITING : 93 F(TTt) -> P(CCt) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atggcaaaaa aaagtcttat tcagagggag aaaaagagag aaaaatCgaa CD 51 gcagaagtac caggcttttc gtaaatattt gaaagaagag atgagccaaa CD 101 ctttatctat agataaaaag tgggaaatcc aaaagcaatt acaatctcta CD 151 ccacgtaata gtacacctac tcgtattcat cgtcgttgtt tcttaaccgg CD 201 aagacctaga gccaattatc gtgattttaa tttatctaga catatacCac CD 251 gtgagatgat tcatgcatgt ttattaTTtg gagtaacgaa agccagttgg CD 301 taa FT EDITED CDNA CD 1 atggcaaaaa aaagtcttat tcagagggag aaaaagagag aaaaatTgaa CD 51 gcagaagtac caggcttttc gtaaatattt gaaagaagag atgagccaaa CD 101 ctttatctat agataaaaag tgggaaatcc aaaagcaatt acaatctcta CD 151 ccacgtaata gtacacctac tcgtattcat cgtcgttgtt tcttaaccgg CD 201 aagacctaga gccaattatc gtgattttaa tttatctaga catatacTac CD 251 gtgagatgat tcatgcatgt ttattaCCtg gagtaacgaa agccagttgg CD 301 taa SQ SEQUENCE 101 AA; MAKKSLIQRE KKREKLKQKY QAFRKYLKEE MSQTLSIDKK WEIQKQLQSL PRNSTPTRIH RRCFLTGRPR ANYRDFNLSR HILREMIHAC LLPGVTKASW * // ID AB086179_27 STANDARD; PRT; 735 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psaB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55348.1 FT PROTEIN_NAME : photosystem I P700 apoprotein A2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 54680 - 56884 FT DIRECTIONS : negative FT EDITING : 5 F(ttC) -> F(ttT) FT EDITING : 44 *(Taa) -> Q(Caa) FT EDITING : 65 S(tCa) -> L(tTa) FT EDITING : 106 *(Tga) -> R(Cga) FT EDITING : 122 *(Taa) -> Q(Caa) FT EDITING : 126 I(aTa) -> T(aCa) FT EDITING : 175 P(cCC) -> L(cTT) FT EDITING : 187 F(tTt) -> S(tCt) FT EDITING : 255 P(cCa) -> L(cTa) FT EDITING : 277 Y(Tat) -> H(Cat) FT EDITING : 410 *(Tga) -> R(Cga) FT EDITING : 431 S(tCc) -> F(tTc) FT EDITING : 452 *(Taa) -> Q(Caa) FT EDITING : 501 T(aCc) -> I(aTc) FT EDITING : 581 S(tCt) -> F(tTt) FT EDITING : 586 M(aTg) -> T(aCg) FT EDITING : 590 V(gtC) -> V(gtT) FT EDITING : 714 P(Cct) -> S(Tct) FT EDITING : 719 S(tCt) -> F(tTt) FT EDITING : 733 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 2205 NT; CD 1 atggcatcaa gattCccaaa attcagccag ggtctatctc aagacccgac CD 51 tacccgtcgt atctggttcg gtattgctac cgcacatgac tttgagagtc CD 101 atgataatat tactgaagag cgtctttatT aaaagatttt tgcttctcat CD 151 ttcggtcaat tagccatcat ttttttatgg acctctggta attCatttca CD 201 tgtcgcttgg cagggtaatt tcgaggcgtg ggtacaagac cctttacatg CD 251 taagaccaat cgctcatgct atttgggatc cccattttgg tgaaccagct CD 301 gtagaagcct ttactTgagg aggagcttta ggtcccgtta atattgctta CD 351 ttctggggtc tatTaatggt ggtataTaat tggcttgcgc accattcaag CD 401 atctttatat tggagctctt tttctgttat tccttgctgc tgttttttta CD 451 atagcgggtt ggttacacct acaacctaaa tggaaaccaa gtgtttcatg CD 501 gtttaagaat gctgagtctc gtcCCaatca ccacttgtca ggactttttg CD 551 gagtaagttT tttagcctgg gcaggacatt taatacatgt agctattcct CD 601 gaatcaaggg gtgagcatgt aagatgggat aatctattaa ccgcattacc CD 651 acatcctcaa gggttaaaac ctttttttga aggtcaatgg ggtatttatg CD 701 ctgaaaatgc tgattcaagt agtcatttgt tcagtacttc tcaaggagca CD 751 ggtacagcta ttcCaacatt cattggcgga ttccatccac aaacccaaag CD 801 tttatggtta actgatattg ctcatcatTa tttagctatt gcagttgttt CD 851 ttattattgc tggtcacatg tatagaacca attttgggat tgggcatagc CD 901 ataaaagaaa ttttagaaac gcatactcct ccaggaggtc gtttaggtcg CD 951 aggacataag ggtctttatg atactatcaa taattccctt cattttcaac CD 1001 tgggtcttgc tttagcttct actggagtta ttacctcctt agtagctcaa CD 1051 catatgtatt ctttaccttc ttatgcatat atagcacaag acttcaccac CD 1101 ccaagctgcg ttgtatactc atcatcaata tattgcaggg tttattatga CD 1151 caggcgcttt cgctcatgga gctatctttt tcattagaga ctataatcca CD 1201 gaacaaaata aagataatgt tttagcgTga atgttagagc ataaagaagc CD 1251 tattatatct catttaagtt gggctagttt atttttgggt tCccatacct CD 1301 tgggactcta tgtccataat gatgttatgc ttgcctttgg taccccagaa CD 1351 aaaTaaatct taatcgagcc tgtatttgct caatggatac aatctgccca CD 1401 tggtaagact ctatatgggt ttgatctact tctatcttca gcggatagtc CD 1451 cagctttcaa tgctggtcaa agcatatggt tacctggttg gttagatgct CD 1501 aCcaataata atagtaattc actattctta actattggtc ctggtgactt CD 1551 tttggttcac catgctattg ctttgggctt gcatacgaca acactaattt CD 1601 tagtgaaagg tgctttggat gcacggggat ccaagctaat gcctgataaa CD 1651 aaagaatttg gttatagttt tccttgtgat ggtccaggaa gaggtggtac CD 1701 ttgtgatatt tcagcctggg atgcttttta tttagctgtt tCttggatgt CD 1751 taaacaTgat tggatgggtC accttttact ggcattggaa acatatcacc CD 1801 ctatggcaag gaaatgtagc tcagttcaat gaatcttcta cttatttgat CD 1851 gggatggttg agagactacc tatggttaaa ttcttcacaa cttattaatg CD 1901 gatataaccc atttggtatg aatagtttat ctgtatgggc atggatgttt CD 1951 ctatttggac atcttgtttg ggctactgga ttcatgttcc ttatttcatg CD 2001 gcgtgggtat tggcaagaac tcattgaaac tctaacatgg gctcatgagc CD 2051 gtacgccttt agctaatttg gtacgttgga gagataaacc agtagctctt CD 2101 tctattgttc aagcacgatt agttggatta acacatttcC ctgtaggcta CD 2151 tatctCtact tatgctgctt tcttaattgc ttccacatca ggtaaatCtg CD 2201 gttag FT EDITED CDNA CD 1 atggcatcaa gattTccaaa attcagccag ggtctatctc aagacccgac CD 51 tacccgtcgt atctggttcg gtattgctac cgcacatgac tttgagagtc CD 101 atgataatat tactgaagag cgtctttatC aaaagatttt tgcttctcat CD 151 ttcggtcaat tagccatcat ttttttatgg acctctggta attTatttca CD 201 tgtcgcttgg cagggtaatt tcgaggcgtg ggtacaagac cctttacatg CD 251 taagaccaat cgctcatgct atttgggatc cccattttgg tgaaccagct CD 301 gtagaagcct ttactCgagg aggagcttta ggtcccgtta atattgctta CD 351 ttctggggtc tatCaatggt ggtataCaat tggcttgcgc accattcaag CD 401 atctttatat tggagctctt tttctgttat tccttgctgc tgttttttta CD 451 atagcgggtt ggttacacct acaacctaaa tggaaaccaa gtgtttcatg CD 501 gtttaagaat gctgagtctc gtcTTaatca ccacttgtca ggactttttg CD 551 gagtaagttC tttagcctgg gcaggacatt taatacatgt agctattcct CD 601 gaatcaaggg gtgagcatgt aagatgggat aatctattaa ccgcattacc CD 651 acatcctcaa gggttaaaac ctttttttga aggtcaatgg ggtatttatg CD 701 ctgaaaatgc tgattcaagt agtcatttgt tcagtacttc tcaaggagca CD 751 ggtacagcta ttcTaacatt cattggcgga ttccatccac aaacccaaag CD 801 tttatggtta actgatattg ctcatcatCa tttagctatt gcagttgttt CD 851 ttattattgc tggtcacatg tatagaacca attttgggat tgggcatagc CD 901 ataaaagaaa ttttagaaac gcatactcct ccaggaggtc gtttaggtcg CD 951 aggacataag ggtctttatg atactatcaa taattccctt cattttcaac CD 1001 tgggtcttgc tttagcttct actggagtta ttacctcctt agtagctcaa CD 1051 catatgtatt ctttaccttc ttatgcatat atagcacaag acttcaccac CD 1101 ccaagctgcg ttgtatactc atcatcaata tattgcaggg tttattatga CD 1151 caggcgcttt cgctcatgga gctatctttt tcattagaga ctataatcca CD 1201 gaacaaaata aagataatgt tttagcgCga atgttagagc ataaagaagc CD 1251 tattatatct catttaagtt gggctagttt atttttgggt tTccatacct CD 1301 tgggactcta tgtccataat gatgttatgc ttgcctttgg taccccagaa CD 1351 aaaCaaatct taatcgagcc tgtatttgct caatggatac aatctgccca CD 1401 tggtaagact ctatatgggt ttgatctact tctatcttca gcggatagtc CD 1451 cagctttcaa tgctggtcaa agcatatggt tacctggttg gttagatgct CD 1501 aTcaataata atagtaattc actattctta actattggtc ctggtgactt CD 1551 tttggttcac catgctattg ctttgggctt gcatacgaca acactaattt CD 1601 tagtgaaagg tgctttggat gcacggggat ccaagctaat gcctgataaa CD 1651 aaagaatttg gttatagttt tccttgtgat ggtccaggaa gaggtggtac CD 1701 ttgtgatatt tcagcctggg atgcttttta tttagctgtt tTttggatgt CD 1751 taaacaCgat tggatgggtT accttttact ggcattggaa acatatcacc CD 1801 ctatggcaag gaaatgtagc tcagttcaat gaatcttcta cttatttgat CD 1851 gggatggttg agagactacc tatggttaaa ttcttcacaa cttattaatg CD 1901 gatataaccc atttggtatg aatagtttat ctgtatgggc atggatgttt CD 1951 ctatttggac atcttgtttg ggctactgga ttcatgttcc ttatttcatg CD 2001 gcgtgggtat tggcaagaac tcattgaaac tctaacatgg gctcatgagc CD 2051 gtacgccttt agctaatttg gtacgttgga gagataaacc agtagctctt CD 2101 tctattgttc aagcacgatt agttggatta acacatttcT ctgtaggcta CD 2151 tatctTtact tatgctgctt tcttaattgc ttccacatca ggtaaatTtg CD 2201 gttag SQ SEQUENCE 735 AA; MASRFPKFSQ GLSQDPTTRR IWFGIATAHD FESHDNITEE RLYQKIFASH FGQLAIIFLW TSGNLFHVAW QGNFEAWVQD PLHVRPIAHA IWDPHFGEPA VEAFTRGGAL GPVNIAYSGV YQWWYTIGLR TIQDLYIGAL FLLFLAAVFL IAGWLHLQPK WKPSVSWFKN AESRLNHHLS GLFGVSSLAW AGHLIHVAIP ESRGEHVRWD NLLTALPHPQ GLKPFFEGQW GIYAENADSS SHLFSTSQGA GTAILTFIGG FHPQTQSLWL TDIAHHHLAI AVVFIIAGHM YRTNFGIGHS IKEILETHTP PGGRLGRGHK GLYDTINNSL HFQLGLALAS TGVITSLVAQ HMYSLPSYAY IAQDFTTQAA LYTHHQYIAG FIMTGAFAHG AIFFIRDYNP EQNKDNVLAR MLEHKEAIIS HLSWASLFLG FHTLGLYVHN DVMLAFGTPE KQILIEPVFA QWIQSAHGKT LYGFDLLLSS ADSPAFNAGQ SIWLPGWLDA INNNSNSLFL TIGPGDFLVH HAIALGLHTT TLILVKGALD ARGSKLMPDK KEFGYSFPCD GPGRGGTCDI SAWDAFYLAV FWMLNTIGWV TFYWHWKHIT LWQGNVAQFN ESSTYLMGWL RDYLWLNSSQ LINGYNPFGM NSLSVWAWMF LFGHLVWATG FMFLISWRGY WQELIETLTW AHERTPLANL VRWRDKPVAL SIVQARLVGL THFSVGYIFT YAAFLIASTS GKFG* // ID AB086179_28 STANDARD; PRT; 751 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psaA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55349.1 FT PROTEIN_NAME : photosystem I P700 apoprotein A1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 56910 - 59162 FT DIRECTIONS : negative FT EDITING : 77 *(Taa) -> Q(Caa) FT EDITING : 96 P(Ccc) -> S(Tcc) FT EDITING : 136 *(Taa) -> Q(Caa) FT EDITING : 240 S(tCt) -> F(tTt) FT EDITING : 367 Y(Tac) -> H(Cac) FT EDITING : 531 S(tCc) -> F(tTc) FT EDITING : 605 T(aCt) -> I(aTt) FT EDITING : 606 S(tCt) -> F(tTt) FT EDITING : 655 *(Taa) -> Q(Caa) FT EDITING : 669 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 2253 NT; CD 1 atgaccattc gttcaccgga accagaagtc aagattgtag tggagaagga CD 51 tcctgtaaaa acctcttttg agaaatgggc taaacctgga catttttcaa CD 101 ggactttggc taaaggtcct agtaccacta cttggatttg gaatctacat CD 151 gctgatgctc atgatttcga tagccatact aatgatttag aagaagtttc CD 201 tcgcaaagtt tttagtgctc actttggtTa attagccatc atttttattt CD 251 ggttgagtgg aatgtatttc catggggcca gattcCccaa ttatgaagca CD 301 tggttaggtg atcctactca cattaaacct agtgcccaag ttgtttggcc CD 351 aatagtaggt caagaaattt tgaatggaga cgtaggtggt ggttttcaag CD 401 gaataTaaat aacctctggt tttttccaaa tttggcgagc atctggaata CD 451 actagtgaat tacaacttta ttctactgca attggtggat tgatcttcgc CD 501 ggcattaatg ctttttgctg gttggtttca ctatcataaa gctgctccca CD 551 aattagtttg gtttcaagat gtagaatcta tgttgaatca ccatctagct CD 601 gggttattgg gactaggttc tttagcttgg gcaggacatc aagtacacgt CD 651 ttctttaccc ataaatgaac ttttagatgc cggaatagat cctaaagaaa CD 701 tacctcttcc tcatgaatCt attttgaatc gtgacctctt agctcaactt CD 751 tttcccagtt tcgctaaagg attaactcca tttttcactt taaattggtc CD 801 agaatattca gattttctaa cctttcgtgg aggattaaat ccagtaacgg CD 851 gtggtttatg gctgactgat actgcacatc atcatttagc cattgcagtt CD 901 gttttcctag tagctggtca tatgtataga actaattggg gtattggaca CD 951 tagtataaag gaaattttgg aagctcataa aggtcctttt acaggtgaag CD 1001 gtcataaagg tctttatgag atcttaacca cttcatggca tgcccaatta CD 1051 gcccttaacc tagctatgtt gggttctcta actattatag tggctcacTa CD 1101 catgtattcc atgcctccgt atccatactt agctattgac tatagtactc CD 1151 aactctccct ttttacacat catatgtgga ttggtggatt tactatagtt CD 1201 ggcgctgccg cacacgcagc tatttttatg gtgagagatt atgatccaac CD 1251 tagccagtat aataatttac tggatcgcgt tcttagacat cgtgatgcaa CD 1301 tcatatcaca tctcaactgg gcatgtattt ttttaggttt tcatagtttc CD 1351 ggcttataca tccataatga tactatgagt gctttgggac gtcccgaaga CD 1401 catgttctca gatacagcta tacaactaca acccattttt gctcaatggg CD 1451 tgcagaacac tcatgtttta gcacctaatt taacggctcc caatgcaaca CD 1501 gcgagtacca gtttaacttg gggaggtggt gatttagtag cagtaggcgg CD 1551 taaagtagct ttgttaccaa tttctctagg aactgcagat tCcttagtgc CD 1601 accatattca tgcttttact atccatgtaa ctgttttgat attactgaaa CD 1651 ggtgtcttat ttgctcgtag ctctcgctta atacctgaca aagctaatct CD 1701 tggttttcgt tttccttgtg acggacctgg aagaggagga acatgtcaag CD 1751 tttctgcttg ggatcatgtt tttttaggtt tattctggat gtacaatgca CD 1801 atttctgtgg ttaCttCtca cttcagttgg aaaatgcaat cagatgtttg CD 1851 gggtagtttg agtaaccagg gagtagtcac tcatattaca gggggaaact CD 1901 ttgcacaaag ttcaataact atcaatggat ggcttcgcga ctttctatgg CD 1951 gcacaggccg ctTaagtaat ccaatcctac ggttcttcat tatctgcgta CD 2001 tggtcCctta tttttaggag ctcattttgt ttgggctttc agtttaatgt CD 2051 tcttatttag tggtcgcgga tactggcagg aactcattga atccattgtc CD 2101 tgggctcaca ataaactaaa agttgctcct gctatccagc ctagagcctt CD 2151 gagtattgta caaggacgtg ctgtaggagt agctcactac cttctaggtg CD 2201 ggattgccac aacatgggca ttctttctag caagaattat tgcagtagga CD 2251 taa FT EDITED CDNA CD 1 atgaccattc gttcaccgga accagaagtc aagattgtag tggagaagga CD 51 tcctgtaaaa acctcttttg agaaatgggc taaacctgga catttttcaa CD 101 ggactttggc taaaggtcct agtaccacta cttggatttg gaatctacat CD 151 gctgatgctc atgatttcga tagccatact aatgatttag aagaagtttc CD 201 tcgcaaagtt tttagtgctc actttggtCa attagccatc atttttattt CD 251 ggttgagtgg aatgtatttc catggggcca gattcTccaa ttatgaagca CD 301 tggttaggtg atcctactca cattaaacct agtgcccaag ttgtttggcc CD 351 aatagtaggt caagaaattt tgaatggaga cgtaggtggt ggttttcaag CD 401 gaataCaaat aacctctggt tttttccaaa tttggcgagc atctggaata CD 451 actagtgaat tacaacttta ttctactgca attggtggat tgatcttcgc CD 501 ggcattaatg ctttttgctg gttggtttca ctatcataaa gctgctccca CD 551 aattagtttg gtttcaagat gtagaatcta tgttgaatca ccatctagct CD 601 gggttattgg gactaggttc tttagcttgg gcaggacatc aagtacacgt CD 651 ttctttaccc ataaatgaac ttttagatgc cggaatagat cctaaagaaa CD 701 tacctcttcc tcatgaatTt attttgaatc gtgacctctt agctcaactt CD 751 tttcccagtt tcgctaaagg attaactcca tttttcactt taaattggtc CD 801 agaatattca gattttctaa cctttcgtgg aggattaaat ccagtaacgg CD 851 gtggtttatg gctgactgat actgcacatc atcatttagc cattgcagtt CD 901 gttttcctag tagctggtca tatgtataga actaattggg gtattggaca CD 951 tagtataaag gaaattttgg aagctcataa aggtcctttt acaggtgaag CD 1001 gtcataaagg tctttatgag atcttaacca cttcatggca tgcccaatta CD 1051 gcccttaacc tagctatgtt gggttctcta actattatag tggctcacCa CD 1101 catgtattcc atgcctccgt atccatactt agctattgac tatagtactc CD 1151 aactctccct ttttacacat catatgtgga ttggtggatt tactatagtt CD 1201 ggcgctgccg cacacgcagc tatttttatg gtgagagatt atgatccaac CD 1251 tagccagtat aataatttac tggatcgcgt tcttagacat cgtgatgcaa CD 1301 tcatatcaca tctcaactgg gcatgtattt ttttaggttt tcatagtttc CD 1351 ggcttataca tccataatga tactatgagt gctttgggac gtcccgaaga CD 1401 catgttctca gatacagcta tacaactaca acccattttt gctcaatggg CD 1451 tgcagaacac tcatgtttta gcacctaatt taacggctcc caatgcaaca CD 1501 gcgagtacca gtttaacttg gggaggtggt gatttagtag cagtaggcgg CD 1551 taaagtagct ttgttaccaa tttctctagg aactgcagat tTcttagtgc CD 1601 accatattca tgcttttact atccatgtaa ctgttttgat attactgaaa CD 1651 ggtgtcttat ttgctcgtag ctctcgctta atacctgaca aagctaatct CD 1701 tggttttcgt tttccttgtg acggacctgg aagaggagga acatgtcaag CD 1751 tttctgcttg ggatcatgtt tttttaggtt tattctggat gtacaatgca CD 1801 atttctgtgg ttaTttTtca cttcagttgg aaaatgcaat cagatgtttg CD 1851 gggtagtttg agtaaccagg gagtagtcac tcatattaca gggggaaact CD 1901 ttgcacaaag ttcaataact atcaatggat ggcttcgcga ctttctatgg CD 1951 gcacaggccg ctCaagtaat ccaatcctac ggttcttcat tatctgcgta CD 2001 tggtcTctta tttttaggag ctcattttgt ttgggctttc agtttaatgt CD 2051 tcttatttag tggtcgcgga tactggcagg aactcattga atccattgtc CD 2101 tgggctcaca ataaactaaa agttgctcct gctatccagc ctagagcctt CD 2151 gagtattgta caaggacgtg ctgtaggagt agctcactac cttctaggtg CD 2201 ggattgccac aacatgggca ttctttctag caagaattat tgcagtagga CD 2251 taa SQ SEQUENCE 751 AA; MTIRSPEPEV KIVVEKDPVK TSFEKWAKPG HFSRTLAKGP STTTWIWNLH ADAHDFDSHT NDLEEVSRKV FSAHFGQLAI IFIWLSGMYF HGARFSNYEA WLGDPTHIKP SAQVVWPIVG QEILNGDVGG GFQGIQITSG FFQIWRASGI TSELQLYSTA IGGLIFAALM LFAGWFHYHK AAPKLVWFQD VESMLNHHLA GLLGLGSLAW AGHQVHVSLP INELLDAGID PKEIPLPHEF ILNRDLLAQL FPSFAKGLTP FFTLNWSEYS DFLTFRGGLN PVTGGLWLTD TAHHHLAIAV VFLVAGHMYR TNWGIGHSIK EILEAHKGPF TGEGHKGLYE ILTTSWHAQL ALNLAMLGSL TIIVAHHMYS MPPYPYLAID YSTQLSLFTH HMWIGGFTIV GAAAHAAIFM VRDYDPTSQY NNLLDRVLRH RDAIISHLNW ACIFLGFHSF GLYIHNDTMS ALGRPEDMFS DTAIQLQPIF AQWVQNTHVL APNLTAPNAT ASTSLTWGGG DLVAVGGKVA LLPISLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA ISVVIFHFSW KMQSDVWGSL SNQGVVTHIT GGNFAQSSIT INGWLRDFLW AQAAQVIQSY GSSLSAYGLL FLGAHFVWAF SLMFLFSGRG YWQELIESIV WAHNKLKVAP AIQPRALSIV QGRAVGVAHY LLGGIATTWA FFLARIIAVG * // ID AB086179_29 STANDARD; PRT; 171 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ycf3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55350.1 FT PROTEIN_NAME : Ycf3 protein FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 42/1 FT INTRON 119/0 FT EDITING : 10 S(tCt) -> F(tTt) FT EDITING : 22 S(tCa) -> L(tTa) FT EDITING : 30 *(Taa) -> Q(Caa) FT EDITING : 36 S(tCt) -> F(tTt) FT EDITING : 55 S(tCa) -> L(tTa) FT EDITING : 71 *(Tga) -> R(Cga) FT EDITING : 76 H(Cat) -> Y(Tat) FT EDITING : 92 S(tCg) -> L(tTg) FT EDITING : 95 H(Cat) -> Y(Tat) FT EDITING : 105 P(cCg) -> L(cTg) FT EDITING : 106 L(cTa) -> P(cCa) FT EDITING : 109 P(cCa) -> L(cTa) FT EDITING : 115 T(aCc) -> I(aTc) FT EDITING : 138 *(Taa) -> Q(Caa) FT EDITING : 146 V(gTg) -> A(gCg) FT EDITING : 151 L(cTa) -> P(cCa) FT CODON_START : 1 CL CDNALEN 513 NT; CD 1 atgcctagat ctcaaaagaa tgataattCt atcgataaaa ctttcacaat CD 51 tatagcggat atttCattac agataatccc aacgactTaa agggaaaaag CD 101 aagcttCtac tcattacaga gatggaatgt cggctcaatc agaaggagaa CD 151 tatgcggaag cctCacagaa ttattatgaa gctatgcgct tagaaattga CD 201 tccttatgat Tgaagttata tattaCataa tataggtctt attcacacaa CD 251 gtaatgggga acacgctaag gcttCggagt atCattttca ggcattggaa CD 301 cgaaactcat cccCgcTaca agctcCaaat aatatggctg ttaCctgtca CD 351 ttaccgagga gagcaagcca ttgaggaagg agatcctgaa acttgcgaag CD 401 tctggtttga tTaagctgct gattattgga aaaaagTgat atcgctagct CD 451 cTaagtaatt atatcgaagc acagaattgg ctaagaatta caggacgttc CD 501 caaaatcaaa taa FT EDITED CDNA CD 1 atgcctagat ctcaaaagaa tgataattTt atcgataaaa ctttcacaat CD 51 tatagcggat atttTattac agataatccc aacgactCaa agggaaaaag CD 101 aagcttTtac tcattacaga gatggaatgt cggctcaatc agaaggagaa CD 151 tatgcggaag cctTacagaa ttattatgaa gctatgcgct tagaaattga CD 201 tccttatgat Cgaagttata tattaTataa tataggtctt attcacacaa CD 251 gtaatgggga acacgctaag gcttTggagt atTattttca ggcattggaa CD 301 cgaaactcat cccTgcCaca agctcTaaat aatatggctg ttaTctgtca CD 351 ttaccgagga gagcaagcca ttgaggaagg agatcctgaa acttgcgaag CD 401 tctggtttga tCaagctgct gattattgga aaaaagCgat atcgctagct CD 451 cCaagtaatt atatcgaagc acagaattgg ctaagaatta caggacgttc CD 501 caaaatcaaa taa SQ SEQUENCE 171 AA; MPRSQKNDNF IDKTFTIIAD ILLQIIPTTQ REKEAFTHYR DGMSAQSEGE YAEALQNYYE AMRLEIDPYD RSYILYNIGL IHTSNGEHAK ALEYYFQALE RNSSLPQALN NMAVICHYRG EQAIEEGDPE TCEVWFDQAA DYWKKAISLA PSNYIEAQNW LRITGRSKIK * // ID AB086179_30 STANDARD; PRT; 203 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55351.1 FT PROTEIN_NAME : ribosomal protein S4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 63339 - 63947 FT DIRECTIONS : negative FT EDITING : 64 *(Tga) -> R(Cga) FT EDITING : 79 L(tTa) -> S(tCa) FT EDITING : 91 C(Tgt) -> R(Cgt) FT EDITING : 97 S(tCt) -> F(tTt) FT EDITING : 98 *(Tga) -> R(Cga) FT EDITING : 127 L(cTa) -> P(cCa) FT EDITING : 137 T(aCt) -> I(aTt) FT EDITING : 142 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 609 NT; CD 1 atgtctcgtt accgaggacc tcgtgtaaga ataatacgtc gtctggggac CD 51 tctaccagga ctgactagta aaacacccga atcaaaacct agttatatta CD 101 atcaatctac atctagtaga aaaatatccc aataccgcat tcgtttggaa CD 151 gaaaaacaga aactacgttt tcactatgga attacagagT gacaattact CD 201 taagtatgtt cgtattgcta gaaaagcaaa aggatTaaca ggacaggttt CD 251 tgttacaatt acttgagatg Tgtttagata atattatttC tTgattaggt CD 301 ctggctccca ctattccggg agctagacaa ttagttaacc atagacacgt CD 351 tttagtcaat gattgtactg tagacatacT aagttttcgt tgtaaacctc CD 401 aagacgttaC tactatacgg gatTgacaaa aatctcagaa tctaatgaag CD 451 aggagtaggg attcttacga gaagtatgga ataccaaatc atttaacttt CD 501 taattctgta cagaatatag ggttagttaa tgaaactata gatcgtgact CD 551 ggattggttt aaaaataaac gaattattag tggtagaata ttattctcgt CD 601 caagcttaa FT EDITED CDNA CD 1 atgtctcgtt accgaggacc tcgtgtaaga ataatacgtc gtctggggac CD 51 tctaccagga ctgactagta aaacacccga atcaaaacct agttatatta CD 101 atcaatctac atctagtaga aaaatatccc aataccgcat tcgtttggaa CD 151 gaaaaacaga aactacgttt tcactatgga attacagagC gacaattact CD 201 taagtatgtt cgtattgcta gaaaagcaaa aggatCaaca ggacaggttt CD 251 tgttacaatt acttgagatg Cgtttagata atattatttT tCgattaggt CD 301 ctggctccca ctattccggg agctagacaa ttagttaacc atagacacgt CD 351 tttagtcaat gattgtactg tagacatacC aagttttcgt tgtaaacctc CD 401 aagacgttaT tactatacgg gatCgacaaa aatctcagaa tctaatgaag CD 451 aggagtaggg attcttacga gaagtatgga ataccaaatc atttaacttt CD 501 taattctgta cagaatatag ggttagttaa tgaaactata gatcgtgact CD 551 ggattggttt aaaaataaac gaattattag tggtagaata ttattctcgt CD 601 caagcttaa SQ SEQUENCE 203 AA; MSRYRGPRVR IIRRLGTLPG LTSKTPESKP SYINQSTSSR KISQYRIRLE EKQKLRFHYG ITERQLLKYV RIARKAKGST GQVLLQLLEM RLDNIIFRLG LAPTIPGARQ LVNHRHVLVN DCTVDIPSFR CKPQDVITIR DRQKSQNLMK RSRDSYEKYG IPNHLTFNSV QNIGLVNETI DRDWIGLKIN ELLVVEYYSR QA* // ID AB086179_31 STANDARD; PRT; 170 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhJ FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55352.1 FT PROTEIN_NAME : NADH dehydrogenase 30 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 66629 - 67138 FT DIRECTIONS : negative FT EDITING : 20 P(cCa) -> L(cTa) FT EDITING : 59 S(tCt) -> F(tTt) FT EDITING : 64 P(Ccc) -> S(Tcc) FT EDITING : 72 L(cTa) -> P(cCa) FT EDITING : 82 P(cCt) -> L(cTt) FT EDITING : 110 F(tTt) -> S(tCt) FT CODON_START : 1 CL CDNALEN 510 NT; CD 1 atgttagaaa cttttactaa tgataccaat gaaatacaag gtcgattatc CD 51 tgcttggcCa attaaacata gattagctca tagacctttg ggttttgatt CD 101 accaaggtgt agaaactttg caagttaggt ctgaggattg gctttctata CD 151 gctgttgctt tatatgctta tggttCtaat tatcttcgtC cccaatgcgt CD 201 atatgatgta gctcTagggg gattactagc tagtgtgtat catcCtacaa CD 251 aggtacagag taatgcggat caacctgaag aagtatgtat aaagattttt CD 301 gtatcaagga aaaatcctaa aattccatTt gttttttggg tttggaaagg CD 351 cgcagatttt caagaacgag aatcttatga tatgttggga atctcttatg CD 401 agagtcaccc acgtcttaaa cgtattttga tgcctgacag ttggattgga CD 451 tggcctttac gcaaagatta tattgtacct aacttttatg agctgcagga CD 501 tgcttattga FT EDITED CDNA CD 1 atgttagaaa cttttactaa tgataccaat gaaatacaag gtcgattatc CD 51 tgcttggcTa attaaacata gattagctca tagacctttg ggttttgatt CD 101 accaaggtgt agaaactttg caagttaggt ctgaggattg gctttctata CD 151 gctgttgctt tatatgctta tggttTtaat tatcttcgtT cccaatgcgt CD 201 atatgatgta gctcCagggg gattactagc tagtgtgtat catcTtacaa CD 251 aggtacagag taatgcggat caacctgaag aagtatgtat aaagattttt CD 301 gtatcaagga aaaatcctaa aattccatCt gttttttggg tttggaaagg CD 351 cgcagatttt caagaacgag aatcttatga tatgttggga atctcttatg CD 401 agagtcaccc acgtcttaaa cgtattttga tgcctgacag ttggattgga CD 451 tggcctttac gcaaagatta tattgtacct aacttttatg agctgcagga CD 501 tgcttattga SQ SEQUENCE 170 AA; MLETFTNDTN EIQGRLSAWL IKHRLAHRPL GFDYQGVETL QVRSEDWLSI AVALYAYGFN YLRSQCVYDV APGGLLASVY HLTKVQSNAD QPEEVCIKIF VSRKNPKIPS VFWVWKGADF QERESYDMLG ISYESHPRLK RILMPDSWIG WPLRKDYIVP NFYELQDAY* // ID AB086179_32 STANDARD; PRT; 248 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhK FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55353.2 FT PROTEIN_NAME : NADH dehydrogenase 27 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 67188 - 67931 FT DIRECTIONS : negative FT EDITING : 35 T(aCt) -> I(aTt) FT EDITING : 117 S(Tct) -> P(Cct) FT EDITING : 128 T(aCt) -> I(aTt) FT EDITING : 133 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 744 NT; CD 1 atggtctcag ttcctaaata tttaaatttt gaaagtgatc ttgcggagtc CD 51 tgtgacaaat tctatggatt cttccttacc tgatgaaacc acttcagact CD 101 caaCtatttt aacaaccttt aatgatttct caaattgggc taggctctcc CD 151 agtttatggc cactccttta tggtactagt tgttgcttca tcgaattcgc CD 201 ttcgttaatt ggctcgcgat tcgattttga tcgttatggc ttggtaccaa CD 251 gatctagtcc cagacaagcc gatcttataa taacagctgg aactgttact CD 301 atgaaaatgg ctccttcttt agtaaggttg tatgaacaga tgcccgaaTc CD 351 taaatatgta attgctatgg gagcatgtac taCtacagga ggtatgtCta CD 401 gcacagattc atatagcaca gttcgtgggg tggataaatt aattcccgta CD 451 gacatttatt tgcctggttg tccaccaaaa ccagaagcta ttatagatgc CD 501 tataataaaa cttcgtaaag gagtagctcg ggaggtacat gaacgtaagg CD 551 ataagcttag acaaacaaga aggtatttca ctctgaatca ccagttagag CD 601 attgtaccta tcattcatac tggtaagtat gacgaacact tattctccaa CD 651 gttttccgaa atttccattg aacctaaatt gaatgtatct cctcaaagaa CD 701 ttgagaaatc gaaaagttca atatcttccc aaatatcctt ttaa FT EDITED CDNA CD 1 atggtctcag ttcctaaata tttaaatttt gaaagtgatc ttgcggagtc CD 51 tgtgacaaat tctatggatt cttccttacc tgatgaaacc acttcagact CD 101 caaTtatttt aacaaccttt aatgatttct caaattgggc taggctctcc CD 151 agtttatggc cactccttta tggtactagt tgttgcttca tcgaattcgc CD 201 ttcgttaatt ggctcgcgat tcgattttga tcgttatggc ttggtaccaa CD 251 gatctagtcc cagacaagcc gatcttataa taacagctgg aactgttact CD 301 atgaaaatgg ctccttcttt agtaaggttg tatgaacaga tgcccgaaCc CD 351 taaatatgta attgctatgg gagcatgtac taTtacagga ggtatgtTta CD 401 gcacagattc atatagcaca gttcgtgggg tggataaatt aattcccgta CD 451 gacatttatt tgcctggttg tccaccaaaa ccagaagcta ttatagatgc CD 501 tataataaaa cttcgtaaag gagtagctcg ggaggtacat gaacgtaagg CD 551 ataagcttag acaaacaaga aggtatttca ctctgaatca ccagttagag CD 601 attgtaccta tcattcatac tggtaagtat gacgaacact tattctccaa CD 651 gttttccgaa atttccattg aacctaaatt gaatgtatct cctcaaagaa CD 701 ttgagaaatc gaaaagttca atatcttccc aaatatcctt ttaa SQ SEQUENCE 248 AA; MVSVPKYLNF ESDLAESVTN SMDSSLPDET TSDSIILTTF NDFSNWARLS SLWPLLYGTS CCFIEFASLI GSRFDFDRYG LVPRSSPRQA DLIITAGTVT MKMAPSLVRL YEQMPEPKYV IAMGACTITG GMFSTDSYST VRGVDKLIPV DIYLPGCPPK PEAIIDAIIK LRKGVAREVH ERKDKLRQTR RYFTLNHQLE IVPIIHTGKY DEHLFSKFSE ISIEPKLNVS PQRIEKSKSS ISSQISF* // ID AB086179_33 STANDARD; PRT; 121 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55354.1 FT PROTEIN_NAME : NADH dehydrogenase ND3 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 67922 - 68284 FT DIRECTIONS : negative FT EDITING : 56 I(atC) -> I(atT) FT EDITING : 59 *(Taa) -> Q(Caa) FT EDITING : 78 S(tCt) -> F(tTt) FT EDITING : 94 S(tCt) -> F(tTt) FT EDITING : 98 S(tCc) -> F(tTc) FT EDITING : 102 S(tCc) -> F(tTc) FT EDITING : 121 Q(Cag) -> *(Tag) FT CODON_START : 1 CL CDNALEN 363 NT; CD 1 atgtttttag tctccaaata taactatttc tggatatttc tcctaatagc CD 51 tagtcttatt cctactatag cattctctat ttccagagtt atagcaccta CD 101 ttagtaaagg accagaaaaa tttactagtt atgaatgtgg tatagaacct CD 151 atgggagatg cttggatCca atttTaaatt cgttattata tgtttgcttt CD 201 agttttcgtt atttttgatg ttgaaactgt ttCtctctat ccatgggcta CD 251 tgagttttaa gcaactgggt atacctgctt Ctattgaagt ctCcattttt CD 301 gtttCcattc taattattgg tttgatttac gcatggcgaa aaggagcatt CD 351 agaatggtct Cag FT EDITED CDNA CD 1 atgtttttag tctccaaata taactatttc tggatatttc tcctaatagc CD 51 tagtcttatt cctactatag cattctctat ttccagagtt atagcaccta CD 101 ttagtaaagg accagaaaaa tttactagtt atgaatgtgg tatagaacct CD 151 atgggagatg cttggatTca atttCaaatt cgttattata tgtttgcttt CD 201 agttttcgtt atttttgatg ttgaaactgt ttTtctctat ccatgggcta CD 251 tgagttttaa gcaactgggt atacctgctt Ttattgaagt ctTcattttt CD 301 gtttTcattc taattattgg tttgatttac gcatggcgaa aaggagcatt CD 351 agaatggtct Tag SQ SEQUENCE 121 AA; MFLVSKYNYF WIFLLIASLI PTIAFSISRV IAPISKGPEK FTSYECGIEP MGDAWIQFQI RYYMFALVFV IFDVETVFLY PWAMSFKQLG IPAFIEVFIF VFILIIGLIY AWRKGALEWS * // ID AB086179_34 STANDARD; PRT; 139 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : atpE FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55355.1 FT PROTEIN_NAME : ATPase epsilon subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 69871 - 70287 FT DIRECTIONS : negative FT EDITING : 4 N(aaT) -> N(aaC) FT EDITING : 24 P(cCa) -> L(cTa) FT EDITING : 30 *(Taa) -> Q(Caa) FT EDITING : 52 C(Tgt) -> R(Cgt) FT EDITING : 70 D(gaT) -> D(gaC) FT CODON_START : 1 CL CDNALEN 417 NT; CD 1 atgactttaa aTcttcgtgt aatggctcct aatagaattg tttggaattc CD 51 agaggttgaa gagattgttc Catctactaa tagtggtTaa attggcgtat CD 101 tacccaatca tgctccactt cttaccgcat tagatatagg aattattaaa CD 151 ataTgtctta atggagaatg gtccactatg gcgttaatgg gtggttttgc CD 201 tatgatagaT aataatggaa tgactatttt ggttaatgag gcagaaaaag CD 251 ccactgaaat aaatcctcaa gaggctcgag aaaattataa aatggctcaa CD 301 aaagatttag ctaaagctga gggtgggaaa caaaaaattg aagccaattt CD 351 agctttcaag agagctaagg cacgattaga agctattgat gttatatcat CD 401 ttcctgtttc aaattaa FT EDITED CDNA CD 1 atgactttaa aCcttcgtgt aatggctcct aatagaattg tttggaattc CD 51 agaggttgaa gagattgttc Tatctactaa tagtggtCaa attggcgtat CD 101 tacccaatca tgctccactt cttaccgcat tagatatagg aattattaaa CD 151 ataCgtctta atggagaatg gtccactatg gcgttaatgg gtggttttgc CD 201 tatgatagaC aataatggaa tgactatttt ggttaatgag gcagaaaaag CD 251 ccactgaaat aaatcctcaa gaggctcgag aaaattataa aatggctcaa CD 301 aaagatttag ctaaagctga gggtgggaaa caaaaaattg aagccaattt CD 351 agctttcaag agagctaagg cacgattaga agctattgat gttatatcat CD 401 ttcctgtttc aaattaa SQ SEQUENCE 139 AA; MTLNLRVMAP NRIVWNSEVE EIVLSTNSGQ IGVLPNHAPL LTALDIGIIK IRLNGEWSTM ALMGGFAMID NNGMTILVNE AEKATEINPQ EARENYKMAQ KDLAKAEGGK QKIEANLAFK RAKARLEAID VISFPVSN* // ID AB086179_35 STANDARD; PRT; 493 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : atpB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55356.1 FT PROTEIN_NAME : ATPase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 70293 - 71771 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 65 *(Taa) -> Q(Caa) FT EDITING : 139 *(Taa) -> Q(Caa) FT EDITING : 159 S(Tct) -> P(Cct) FT EDITING : 162 C(Tgt) -> R(Cgt) FT EDITING : 168 P(cCa) -> L(cTa) FT EDITING : 249 S(tCa) -> L(tTa) FT EDITING : 251 V(gTt) -> A(gCt) FT EDITING : 267 S(TCt) -> L(CTt) FT EDITING : 274 L(Ctt) -> F(Ttt) FT EDITING : 275 C(Tgt) -> R(Cgt) FT EDITING : 286 S(tCa) -> L(tTa) FT EDITING : 287 S(tCa) -> L(tTa) FT EDITING : 313 P(Cca) -> S(Tca) FT EDITING : 329 V(gTt) -> A(gCt) FT EDITING : 335 S(Tct) -> P(Cct) FT EDITING : 344 S(tCa) -> L(tTa) FT EDITING : 351 F(tTt) -> S(tCt) FT EDITING : 361 L(cTt) -> P(cCt) FT EDITING : 362 V(gTc) -> A(gCc) FT EDITING : 370 F(tTt) -> S(tCt) FT EDITING : 405 T(aCt) -> I(aTt) FT EDITING : 408 S(tCa) -> L(tTa) FT EDITING : 411 S(tCa) -> L(tTa) FT EDITING : 439 S(tCt) -> F(tTt) FT EDITING : 470 *(Taa) -> Q(Caa) FT EDITING : 472 S(tCt) -> F(tTt) FT EDITING : 478 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 1479 NT; CD 1 aCgaaaacaa attatcttat tcttggagtt tctacactta tctccaagaa CD 51 tgtggggcat attagtcaga taatcggacc agtactagat gtaacttttc CD 101 ctccaggtaa aatgcctaat atttacaatt ctttaatagt ccgaggtcaa CD 151 aatccagctg gtcaagagat taatgttact tgtgaagtac aaTaattatt CD 201 agggaataat aaggttaggg ctgtagcaat gagtgctaca gatggtttga CD 251 caaggggaat gaaagttact gatactggag cccccttaag tgttccagtc CD 301 ggtgaagtta ctcttggacg aattttcaat gttcttggag aacctgttga CD 351 taatttaggt gctatagatg ttagcacaac atttcctatt catagatctg CD 401 cccctgcctt tacaTaatta gatactaaat tatccatctt tgaaacagga CD 451 attaaagtag tagatctgtt agctTcttat cgtTgtggag gaaagattgg CD 501 acCatttgga ggagctggag taggaaaaac ggtactcatt atggagttga CD 551 ttaataacat agctaaagct catggaggtg tatccgtttt tggtggagta CD 601 ggggaacgta cccgtgaagg aaacgatctt tatatggaaa tgaaagaatc CD 651 gaaagttatt aatgagcaag atatttcaga atcaaaagta gcactagtct CD 701 atggtcagat gaatgagcct ccaggggcgc gtatgagagt tggttCaact CD 751 gTtttaacta tggctgagta ttttcgagat gttaataagc aagacgtaTC CD 801 tttatttatt gataatattC ttTgtttcgt tcaagcagga tcagaagttt CD 851 ctgcttCatC aggtagaatg ccctccgctg taggttatca accaactttg CD 901 agcacagaaa tgggttcttt acaggaaaga attactCcaa caaaagaagg CD 951 atctataaca tcaattcaag ctgtttatgt acctgTtgat gatttgactg CD 1001 acTctgctcc tgctacaaca ttcgctcact Cagatgctac cactgtatta CD 1051 tTtagaggat tagctgccaa aggtatatat cTtgTcgtag atcctttaga CD 1101 ttcaacttTt acgatgcttc aaccctggat tgtaggcgaa gagcattacg CD 1151 agacagcaca aggagttaaa caaaccttac aacgttataa ggaactgcaa CD 1201 gatattatag ctaCtcttgg atCagacgaa tCatcggagg aggatcgttt CD 1251 aactgtagcg agagcacgca aaatagaacg ttttttatca caaccttttt CD 1301 ttgtggcaga ggtttCtacg ggttctccag gtaaatatgt aagtcttatt CD 1351 gaaacaatca agggttttca aatgattctt gctggagaat tagatggtct CD 1401 tcctgaaTaa gcttCttatt tagttggtaa taCtgatgaa gttactgcga CD 1451 aggctgaaac cttacaaatg gagagttga FT EDITED CDNA CD 1 aTgaaaacaa attatcttat tcttggagtt tctacactta tctccaagaa CD 51 tgtggggcat attagtcaga taatcggacc agtactagat gtaacttttc CD 101 ctccaggtaa aatgcctaat atttacaatt ctttaatagt ccgaggtcaa CD 151 aatccagctg gtcaagagat taatgttact tgtgaagtac aaCaattatt CD 201 agggaataat aaggttaggg ctgtagcaat gagtgctaca gatggtttga CD 251 caaggggaat gaaagttact gatactggag cccccttaag tgttccagtc CD 301 ggtgaagtta ctcttggacg aattttcaat gttcttggag aacctgttga CD 351 taatttaggt gctatagatg ttagcacaac atttcctatt catagatctg CD 401 cccctgcctt tacaCaatta gatactaaat tatccatctt tgaaacagga CD 451 attaaagtag tagatctgtt agctCcttat cgtCgtggag gaaagattgg CD 501 acTatttgga ggagctggag taggaaaaac ggtactcatt atggagttga CD 551 ttaataacat agctaaagct catggaggtg tatccgtttt tggtggagta CD 601 ggggaacgta cccgtgaagg aaacgatctt tatatggaaa tgaaagaatc CD 651 gaaagttatt aatgagcaag atatttcaga atcaaaagta gcactagtct CD 701 atggtcagat gaatgagcct ccaggggcgc gtatgagagt tggttTaact CD 751 gCtttaacta tggctgagta ttttcgagat gttaataagc aagacgtaCT CD 801 tttatttatt gataatattT ttCgtttcgt tcaagcagga tcagaagttt CD 851 ctgcttTatT aggtagaatg ccctccgctg taggttatca accaactttg CD 901 agcacagaaa tgggttcttt acaggaaaga attactTcaa caaaagaagg CD 951 atctataaca tcaattcaag ctgtttatgt acctgCtgat gatttgactg CD 1001 acCctgctcc tgctacaaca ttcgctcact Tagatgctac cactgtatta CD 1051 tCtagaggat tagctgccaa aggtatatat cCtgCcgtag atcctttaga CD 1101 ttcaacttCt acgatgcttc aaccctggat tgtaggcgaa gagcattacg CD 1151 agacagcaca aggagttaaa caaaccttac aacgttataa ggaactgcaa CD 1201 gatattatag ctaTtcttgg atTagacgaa tTatcggagg aggatcgttt CD 1251 aactgtagcg agagcacgca aaatagaacg ttttttatca caaccttttt CD 1301 ttgtggcaga ggtttTtacg ggttctccag gtaaatatgt aagtcttatt CD 1351 gaaacaatca agggttttca aatgattctt gctggagaat tagatggtct CD 1401 tcctgaaCaa gcttTttatt tagttggtaa taTtgatgaa gttactgcga CD 1451 aggctgaaac cttacaaatg gagagttga SQ SEQUENCE 493 AA; MKTNYLILGV STLISKNVGH ISQIIGPVLD VTFPPGKMPN IYNSLIVRGQ NPAGQEINVT CEVQQLLGNN KVRAVAMSAT DGLTRGMKVT DTGAPLSVPV GEVTLGRIFN VLGEPVDNLG AIDVSTTFPI HRSAPAFTQL DTKLSIFETG IKVVDLLAPY RRGGKIGLFG GAGVGKTVLI MELINNIAKA HGGVSVFGGV GERTREGNDL YMEMKESKVI NEQDISESKV ALVYGQMNEP PGARMRVGLT ALTMAEYFRD VNKQDVLLFI DNIFRFVQAG SEVSALLGRM PSAVGYQPTL STEMGSLQER ITSTKEGSIT SIQAVYVPAD DLTDPAPATT FAHLDATTVL SRGLAAKGIY PAVDPLDSTS TMLQPWIVGE EHYETAQGVK QTLQRYKELQ DIIAILGLDE LSEEDRLTVA RARKIERFLS QPFFVAEVFT GSPGKYVSLI ETIKGFQMIL AGELDGLPEQ AFYLVGNIDE VTAKAETLQM ES* // ID AB086179_36 STANDARD; PRT; 476 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rbcL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55357.1 FT PROTEIN_NAME : ribulose-1,5-bisphosphate carboxylase/oxygenase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 72912 - 74339 FT DIRECTIONS : positive FT EDITING : 24 H(Cat) -> Y(Tat) FT EDITING : 40 S(tCt) -> F(tTt) FT EDITING : 41 *(Tga) -> R(Cga) FT EDITING : 45 *(Taa) -> Q(Caa) FT EDITING : 101 A(gCt) -> V(gTt) FT EDITING : 104 S(Tct) -> P(Cct) FT EDITING : 133 S(tCa) -> L(tTa) FT EDITING : 138 S(tCa) -> L(tTa) FT EDITING : 162 S(tCg) -> L(tTg) FT EDITING : 226 S(tCt) -> F(tTt) FT EDITING : 275 I(aTt) -> T(aCt) FT EDITING : 301 T(aCC) -> I(aTT) FT EDITING : 314 S(tCa) -> L(tTa) FT EDITING : 318 S(tCa) -> L(tTa) FT EDITING : 328 P(Cca) -> S(Tca) FT EDITING : 339 C(Tgt) -> R(Cgt) FT EDITING : 349 P(cCt) -> L(cTt) FT EDITING : 350 C(Tgt) -> R(Cgt) FT EDITING : 376 L(cTc) -> P(cCc) FT CODON_START : 1 CL CDNALEN 1428 NT; CD 1 atgtcaccac aaacggagac taaagcaggt gttggattta aagctggtgt CD 51 taaagattat agattaaccC attatacccc tgattacgag accaaggata CD 101 ctgatatttt ggcagcgtCt Tgaatgactc ctTaaccagg ggtgccacct CD 151 gaagaagcag gagccgcagt agctgctgaa tcttcaactg gtacatggac CD 201 tactgtttgg accgatggac ttaccagcct tgaccgttac aaaggtcgat CD 251 gctacgacat tgaacctgtt gctggagagg aaaatcaata tattgcttat CD 301 gCtgcttatT ctttagattt gtttgaggag ggttctgtta ccaacatgtt CD 351 cacttccatt gtaggtaatg tttttggatt taaagcttta cgagcttCac CD 401 gtctagaaga ttCacgaatt ccacctgctt attccaaaac ctttcaaggt CD 451 ccacctcatg gtattcaagt tgaaagagat aaatCgaata aatatggtcg CD 501 tcctttatta ggatgtacca ttaaaccaaa gttaggttta tctgccaaaa CD 551 actatggtag agctgtatat gaatgtcttc gtggtggact tgatttcacc CD 601 aaagatgacg aaaatgttaa ttctcaacct tttatgcgtt ggagagatcg CD 651 ttttctattc gtagcagaag ctatttCtaa atctcaagct gaaacagggg CD 701 agattaaagg gcattactta aatgccactg caggtacatg tgaggaaatg CD 751 atgaaaaggg cacattttgc tagagaatta ggaatgccta tcgtaatgca CD 801 tgattatttg acaggaggtt ttaTtgcaaa tacgaccctg gctcgttatt CD 851 gtagagacaa tggtttactt cttcatattc atcgtgccat gcatgcagtt CD 901 aCCgacagac aaagaaatca tggtattcac tttcgtgtat Cagctaaagc CD 951 atCacgtatg tccgggggag atcatattca tCcaggtaca gtagtaggta CD 1001 aattagaggg agaaTgtgaa gtaactttag gttttgtgga tttacCtTgt CD 1051 gacgattata ttgaaaaaga tagaagtcgt gggatatatt ttactcaaga CD 1101 ctgggtctct atgcctggtg ttttgcTcgt ggcttcaggt ggtattcatg CD 1151 tttggcatat gtcagcttta actgagattt tcggagatga ttccgtacta CD 1201 cagtttggcg ggggaactct aggacaccct tggggaaatg cacctggtgc CD 1251 agtagctaat cgagttgctt tagaagcttg tgtgcaagct cgtaatgaag CD 1301 gacgtgatct tgctcgcgag ggtaatgata ttatccgtga agctagtaaa CD 1351 tggagtcctg aattagcagc tgcttgtgaa gtatggaaag aaattaaatt CD 1401 cgtttttgag acgattgata ctctataa FT EDITED CDNA CD 1 atgtcaccac aaacggagac taaagcaggt gttggattta aagctggtgt CD 51 taaagattat agattaaccT attatacccc tgattacgag accaaggata CD 101 ctgatatttt ggcagcgtTt Cgaatgactc ctCaaccagg ggtgccacct CD 151 gaagaagcag gagccgcagt agctgctgaa tcttcaactg gtacatggac CD 201 tactgtttgg accgatggac ttaccagcct tgaccgttac aaaggtcgat CD 251 gctacgacat tgaacctgtt gctggagagg aaaatcaata tattgcttat CD 301 gTtgcttatC ctttagattt gtttgaggag ggttctgtta ccaacatgtt CD 351 cacttccatt gtaggtaatg tttttggatt taaagcttta cgagcttTac CD 401 gtctagaaga ttTacgaatt ccacctgctt attccaaaac ctttcaaggt CD 451 ccacctcatg gtattcaagt tgaaagagat aaatTgaata aatatggtcg CD 501 tcctttatta ggatgtacca ttaaaccaaa gttaggttta tctgccaaaa CD 551 actatggtag agctgtatat gaatgtcttc gtggtggact tgatttcacc CD 601 aaagatgacg aaaatgttaa ttctcaacct tttatgcgtt ggagagatcg CD 651 ttttctattc gtagcagaag ctatttTtaa atctcaagct gaaacagggg CD 701 agattaaagg gcattactta aatgccactg caggtacatg tgaggaaatg CD 751 atgaaaaggg cacattttgc tagagaatta ggaatgccta tcgtaatgca CD 801 tgattatttg acaggaggtt ttaCtgcaaa tacgaccctg gctcgttatt CD 851 gtagagacaa tggtttactt cttcatattc atcgtgccat gcatgcagtt CD 901 aTTgacagac aaagaaatca tggtattcac tttcgtgtat Tagctaaagc CD 951 atTacgtatg tccgggggag atcatattca tTcaggtaca gtagtaggta CD 1001 aattagaggg agaaCgtgaa gtaactttag gttttgtgga tttacTtCgt CD 1051 gacgattata ttgaaaaaga tagaagtcgt gggatatatt ttactcaaga CD 1101 ctgggtctct atgcctggtg ttttgcCcgt ggcttcaggt ggtattcatg CD 1151 tttggcatat gtcagcttta actgagattt tcggagatga ttccgtacta CD 1201 cagtttggcg ggggaactct aggacaccct tggggaaatg cacctggtgc CD 1251 agtagctaat cgagttgctt tagaagcttg tgtgcaagct cgtaatgaag CD 1301 gacgtgatct tgctcgcgag ggtaatgata ttatccgtga agctagtaaa CD 1351 tggagtcctg aattagcagc tgcttgtgaa gtatggaaag aaattaaatt CD 1401 cgtttttgag acgattgata ctctataa SQ SEQUENCE 476 AA; MSPQTETKAG VGFKAGVKDY RLTYYTPDYE TKDTDILAAF RMTPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYDIEPV AGEENQYIAY VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL RALRLEDLRI PPAYSKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT KDDENVNSQP FMRWRDRFLF VAEAIFKSQA ETGEIKGHYL NATAGTCEEM MKRAHFAREL GMPIVMHDYL TGGFTANTTL ARYCRDNGLL LHIHRAMHAV IDRQRNHGIH FRVLAKALRM SGGDHIHSGT VVGKLEGERE VTLGFVDLLR DDYIEKDRSR GIYFTQDWVS MPGVLPVASG GIHVWHMSAL TEIFGDDSVL QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLARE GNDIIREASK WSPELAAACE VWKEIKFVFE TIDTL* // ID AB086179_37 STANDARD; PRT; 314 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : accD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55358.1 FT PROTEIN_NAME : acetyl-CoA carboxylase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 74972 - 75913 FT DIRECTIONS : positive FT EDITING : 50 *(Tga) -> R(Cga) FT EDITING : 59 H(Cac) -> Y(Tac) FT EDITING : 78 *(Taa) -> Q(Caa) FT EDITING : 87 F(tTt) -> S(tCt) FT EDITING : 104 *(Tga) -> R(Cga) FT EDITING : 132 T(aCt) -> I(aTt) FT EDITING : 139 P(cCa) -> L(cTa) FT EDITING : 146 P(cCt) -> L(cTt) FT EDITING : 149 T(aCg) -> M(aTg) FT EDITING : 160 F(tTt) -> S(tCt) FT EDITING : 170 T(aCt) -> I(aTt) FT EDITING : 177 L(tTa) -> S(tCa) FT EDITING : 185 F(tTc) -> S(tCc) FT EDITING : 198 S(tCa) -> L(tTa) FT EDITING : 208 S(tCa) -> L(tTa) FT EDITING : 223 P(cCt) -> L(cTt) FT EDITING : 226 S(Tcc) -> P(Ccc) FT EDITING : 228 I(aTa) -> T(aCa) FT EDITING : 243 T(aCt) -> I(aTt) FT EDITING : 246 F(TTt) -> P(CCt) FT EDITING : 252 S(tCt) -> F(tTt) FT EDITING : 260 *(Tag) -> Q(Cag) FT EDITING : 264 *(Taa) -> Q(Caa) FT EDITING : 277 S(tCt) -> F(tTt) FT EDITING : 285 T(aCt) -> I(aTt) FT EDITING : 295 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 942 NT; CD 1 atgtctctaa tgaattggtt tgaagacaga cgcaaattta gtggattaat CD 51 cggggctttc atcgaaaaag caactaaagg gtatatcctc agtgaaagaa CD 101 ggaaagacag acatatcaaa attgatacta ctaaaggatt atggactTga CD 151 tgcgataact gtgaaaatat gcttCacatc agatttttaa gacaaaataa CD 201 acgcatttgc gaagaatgtg gatatcattt gTaaatgagt agtacggaaa CD 251 gaattgaatT tctaattgac cgtggtacct ggcatcctat ggatgaagat CD 301 atggttgctT gagacgcttt gaaattttcc gatgaagatt cctacaaaaa CD 351 tcgggtcctt ttttatcaaa aaagaacagg tttaactgat gctaCtcaaa CD 401 ctgggatagg taaacCaaat ggtattccta ttgcacCtgg tgttaCggat CD 451 ttccaattta tgggaggtag tatgggttTt gtagtaggag aaaagattac CD 501 tcgtcttaCt gaatatggta ctagagaatT aatgccagta ataatagttt CD 551 gttTctctgg aggagcacgt atgcaggaag gaactttgag ttCaatgcaa CD 601 atggctaaaa tttctgccgt ttCacagatt catcaagcac aaaaaaaatt CD 651 attatatata gctattcCta catatTccac aaTaggtggg gttactgcta CD 701 gttttggtat gttgggagac gtgattaCtg ctgaaTTtaa agcatatata CD 751 gcttCtgcag gtaaaagggt gattgaaTag acgttacgtT aaaaaatacc CD 801 tgacggttct caagttgctg agtctttatC tgatcatggt ttacttgatt CD 851 tgaCtgttcc acgcaacctt ttaagaggcg tctCaagtga aatattcgaa CD 901 ctttatagtt cagctccttg tagaaggagt aacaactcgt aa FT EDITED CDNA CD 1 atgtctctaa tgaattggtt tgaagacaga cgcaaattta gtggattaat CD 51 cggggctttc atcgaaaaag caactaaagg gtatatcctc agtgaaagaa CD 101 ggaaagacag acatatcaaa attgatacta ctaaaggatt atggactCga CD 151 tgcgataact gtgaaaatat gcttTacatc agatttttaa gacaaaataa CD 201 acgcatttgc gaagaatgtg gatatcattt gCaaatgagt agtacggaaa CD 251 gaattgaatC tctaattgac cgtggtacct ggcatcctat ggatgaagat CD 301 atggttgctC gagacgcttt gaaattttcc gatgaagatt cctacaaaaa CD 351 tcgggtcctt ttttatcaaa aaagaacagg tttaactgat gctaTtcaaa CD 401 ctgggatagg taaacTaaat ggtattccta ttgcacTtgg tgttaTggat CD 451 ttccaattta tgggaggtag tatgggttCt gtagtaggag aaaagattac CD 501 tcgtcttaTt gaatatggta ctagagaatC aatgccagta ataatagttt CD 551 gttCctctgg aggagcacgt atgcaggaag gaactttgag ttTaatgcaa CD 601 atggctaaaa tttctgccgt ttTacagatt catcaagcac aaaaaaaatt CD 651 attatatata gctattcTta catatCccac aaCaggtggg gttactgcta CD 701 gttttggtat gttgggagac gtgattaTtg ctgaaCCtaa agcatatata CD 751 gcttTtgcag gtaaaagggt gattgaaCag acgttacgtC aaaaaatacc CD 801 tgacggttct caagttgctg agtctttatT tgatcatggt ttacttgatt CD 851 tgaTtgttcc acgcaacctt ttaagaggcg tctTaagtga aatattcgaa CD 901 ctttatagtt cagctccttg tagaaggagt aacaactcgt aa SQ SEQUENCE 314 AA; MSLMNWFEDR RKFSGLIGAF IEKATKGYIL SERRKDRHIK IDTTKGLWTR CDNCENMLYI RFLRQNKRIC EECGYHLQMS STERIESLID RGTWHPMDED MVARDALKFS DEDSYKNRVL FYQKRTGLTD AIQTGIGKLN GIPIALGVMD FQFMGGSMGS VVGEKITRLI EYGTRESMPV IIVCSSGGAR MQEGTLSLMQ MAKISAVLQI HQAQKKLLYI AILTYPTTGG VTASFGMLGD VIIAEPKAYI AFAGKRVIEQ TLRQKIPDGS QVAESLFDHG LLDLIVPRNL LRGVLSEIFE LYSSAPCRRS NNS* // ID AB086179_39 STANDARD; PRT; 185 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ycf4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55360.1 FT PROTEIN_NAME : Ycf4 protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 76893 - 77447 FT DIRECTIONS : positive FT EDITING : 17 *(Tga) -> R(Cga) FT EDITING : 33 P(cCa) -> L(cTa) FT EDITING : 36 P(cCC) -> L(cTT) FT EDITING : 37 P(Cct) -> S(Tct) FT EDITING : 56 *(Taa) -> Q(Caa) FT EDITING : 62 *(Taa) -> Q(Caa) FT EDITING : 110 L(cTc) -> P(cCc) FT EDITING : 120 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 555 NT; CD 1 atgaattggg aatctgaatg gtttcgaata gaacttataa ggggatctTg CD 51 aagaattagt aatttttttt gggcgttcat tcttttgtca ggggcacCag CD 101 gatttcCCCc tgttggactt tccagttact tcggtaaaga tttaatatct CD 151 ttcctatcgt atgagTaaat cgtttttatt ccaTaaggaa ttgtaatgtg CD 201 cttttatggg attgctggtt ctgcctttag cctttacttg tggggcacca CD 251 tcttctggaa tataggtagt ggctataata aatttgataa aggaaaggga CD 301 attgtttgta tttatcgttg gggatttcTc ggtaaaaatc gtcgcattcg CD 351 tatcgaatCc tctatgaaag atatcgaagc tataggaatg gaagttcagg CD 401 aaggttttta tcctcgtcgc actctccgtc tgaaaatcaa aggtcaacaa CD 451 gatgttcctc taacttatat tggtgaaaac ttaactttga gagaaataga CD 501 agaagaagct gccgaattag ctcgtttttt gcaaatatct attgaaggat CD 551 tttga FT EDITED CDNA CD 1 atgaattggg aatctgaatg gtttcgaata gaacttataa ggggatctCg CD 51 aagaattagt aatttttttt gggcgttcat tcttttgtca ggggcacTag CD 101 gatttcTTTc tgttggactt tccagttact tcggtaaaga tttaatatct CD 151 ttcctatcgt atgagCaaat cgtttttatt ccaCaaggaa ttgtaatgtg CD 201 cttttatggg attgctggtt ctgcctttag cctttacttg tggggcacca CD 251 tcttctggaa tataggtagt ggctataata aatttgataa aggaaaggga CD 301 attgtttgta tttatcgttg gggatttcCc ggtaaaaatc gtcgcattcg CD 351 tatcgaatTc tctatgaaag atatcgaagc tataggaatg gaagttcagg CD 401 aaggttttta tcctcgtcgc actctccgtc tgaaaatcaa aggtcaacaa CD 451 gatgttcctc taacttatat tggtgaaaac ttaactttga gagaaataga CD 501 agaagaagct gccgaattag ctcgtttttt gcaaatatct attgaaggat CD 551 tttga SQ SEQUENCE 185 AA; MNWESEWFRI ELIRGSRRIS NFFWAFILLS GALGFLSVGL SSYFGKDLIS FLSYEQIVFI PQGIVMCFYG IAGSAFSLYL WGTIFWNIGS GYNKFDKGKG IVCIYRWGFP GKNRRIRIEF SMKDIEAIGM EVQEGFYPRR TLRLKIKGQQ DVPLTYIGEN LTLREIEEEA AELARFLQIS IEGF* // ID AB086179_40 STANDARD; PRT; 509 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ycf10 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55361.1 FT PROTEIN_NAME : Ycf10 protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 77577 - 79103 FT DIRECTIONS : positive FT EDITING : 9 L(Ctt) -> F(Ttt) FT EDITING : 91 F(tTt) -> S(tCt) FT EDITING : 121 P(Cca) -> S(Tca) FT EDITING : 251 L(cTa) -> P(cCa) FT EDITING : 252 C(Tgt) -> R(Cgt) FT EDITING : 268 *(Tag) -> Q(Cag) FT EDITING : 299 R(Cgg) -> W(Tgg) FT EDITING : 324 *(Taa) -> Q(Caa) FT EDITING : 434 S(TCt) -> L(CTt) FT EDITING : 445 L(CTg) -> S(TCg) FT EDITING : 457 S(tCa) -> L(tTa) FT EDITING : 480 S(tCa) -> L(tTa) FT EDITING : 489 S(tCt) -> F(tTt) FT EDITING : 492 S(tCg) -> L(tTg) FT EDITING : 498 L(CTa) -> S(TCa) FT CODON_START : 1 CL CDNALEN 1527 NT; CD 1 atgaaattat atcagtggca aattCttcga tggttttttg agactctaaa CD 51 ttgttcttta ggaagagctt ataaggctag caaaagaata cagtatataa CD 101 agaaagatta ttcattctat aaaaatacca tcttattttc aaaaggttct CD 151 tggcaagcta taaatcttta tacgaataca gaattgagaa acactttatt CD 201 tataatctac tggagtcttt tagaatatag aattagcctg tgtttcttaa CD 251 atttactaag gaaaattgaa tTtattcaat ttaaaaaatt atccgttatt CD 301 tcttttattc ttaatttaca ttcatctctt tctcatgtta acaaacagct CD 351 tcaaattcta Ccaaaagttc tttttgatag attttatttt tatctttgga CD 401 aaaacatgta tttttccctt cttctccaca attccctttc aagattcgta CD 451 aaggagagta tagaagaatc agagcagagt ggattcaaca acgaaaacaa CD 501 aaaagatttt caagatgaaa cttattttgt tttaaatgaa tcccttgaga CD 551 aagattttag tagaataaga gagatgaata gaaaattggc ttggattgaa CD 601 gtaactttaa atgatttaaa tacttggaag agttactacc tcttcttccc CD 651 atttttatca gagatgaaga atactcctca aaatgaatct tcttttaagt CD 701 tgaagaattt tgaaataacg actccagctt atgattctac aggttttata CD 751 cTaTgttcca taagtcgtac tttatctaga tttcaaatag aattgatggg CD 801 tTagtcaagt tcattggtac ttcaggaatt tcgatcagct aaatatcaag CD 851 cattggcatc tatacaatat ataggatgtt taatttttct tcctCggata CD 901 atttcccgct ctctcaagga atggtttttg gaaccctgga ttaaattttg CD 951 gtgggatact tatcaatctT aaatttctct taattctttc caagaagaaa CD 1001 gagcatcaga agggcttcaa gaagtcgaag aaccactttg gttggataaa CD 1051 ttggtgtcaa attttctgaa aaatcaatcc caagacctta atatagaaat CD 1101 ttatggagaa acaattcaat taataagaat gtacaatgaa aatagtattc CD 1151 aaaccatttt acatttatta acaggtatga tttgcttcac tactttaggt CD 1201 gccttgttta tcttaggtaa gaaaaggctt tctgttttga attcctggat CD 1251 tcaagaatca ttttatagct taagtgatac tatgaaagcc tttgctattT CD 1301 Ctttattaac cgatctatgt attgggtttc atCTgcctca tggctgggaa CD 1351 gtagtaatag gttcttcttC agaacactta ggatttgctc ataataaaca CD 1401 tataatatcc tgtttcgtgt caacttttcc ggttatttCa gatacagttt CD 1451 ctaaatattg gatttCtcgt cattCgaatc gtatatctcc tCTaattgta CD 1501 gcgacttatc atacaatgaa tgaataa FT EDITED CDNA CD 1 atgaaattat atcagtggca aattTttcga tggttttttg agactctaaa CD 51 ttgttcttta ggaagagctt ataaggctag caaaagaata cagtatataa CD 101 agaaagatta ttcattctat aaaaatacca tcttattttc aaaaggttct CD 151 tggcaagcta taaatcttta tacgaataca gaattgagaa acactttatt CD 201 tataatctac tggagtcttt tagaatatag aattagcctg tgtttcttaa CD 251 atttactaag gaaaattgaa tCtattcaat ttaaaaaatt atccgttatt CD 301 tcttttattc ttaatttaca ttcatctctt tctcatgtta acaaacagct CD 351 tcaaattcta Tcaaaagttc tttttgatag attttatttt tatctttgga CD 401 aaaacatgta tttttccctt cttctccaca attccctttc aagattcgta CD 451 aaggagagta tagaagaatc agagcagagt ggattcaaca acgaaaacaa CD 501 aaaagatttt caagatgaaa cttattttgt tttaaatgaa tcccttgaga CD 551 aagattttag tagaataaga gagatgaata gaaaattggc ttggattgaa CD 601 gtaactttaa atgatttaaa tacttggaag agttactacc tcttcttccc CD 651 atttttatca gagatgaaga atactcctca aaatgaatct tcttttaagt CD 701 tgaagaattt tgaaataacg actccagctt atgattctac aggttttata CD 751 cCaCgttcca taagtcgtac tttatctaga tttcaaatag aattgatggg CD 801 tCagtcaagt tcattggtac ttcaggaatt tcgatcagct aaatatcaag CD 851 cattggcatc tatacaatat ataggatgtt taatttttct tcctTggata CD 901 atttcccgct ctctcaagga atggtttttg gaaccctgga ttaaattttg CD 951 gtgggatact tatcaatctC aaatttctct taattctttc caagaagaaa CD 1001 gagcatcaga agggcttcaa gaagtcgaag aaccactttg gttggataaa CD 1051 ttggtgtcaa attttctgaa aaatcaatcc caagacctta atatagaaat CD 1101 ttatggagaa acaattcaat taataagaat gtacaatgaa aatagtattc CD 1151 aaaccatttt acatttatta acaggtatga tttgcttcac tactttaggt CD 1201 gccttgttta tcttaggtaa gaaaaggctt tctgttttga attcctggat CD 1251 tcaagaatca ttttatagct taagtgatac tatgaaagcc tttgctattC CD 1301 Ttttattaac cgatctatgt attgggtttc atTCgcctca tggctgggaa CD 1351 gtagtaatag gttcttcttT agaacactta ggatttgctc ataataaaca CD 1401 tataatatcc tgtttcgtgt caacttttcc ggttatttTa gatacagttt CD 1451 ctaaatattg gatttTtcgt cattTgaatc gtatatctcc tTCaattgta CD 1501 gcgacttatc atacaatgaa tgaataa SQ SEQUENCE 509 AA; MKLYQWQIFR WFFETLNCSL GRAYKASKRI QYIKKDYSFY KNTILFSKGS WQAINLYTNT ELRNTLFIIY WSLLEYRISL CFLNLLRKIE SIQFKKLSVI SFILNLHSSL SHVNKQLQIL SKVLFDRFYF YLWKNMYFSL LLHNSLSRFV KESIEESEQS GFNNENKKDF QDETYFVLNE SLEKDFSRIR EMNRKLAWIE VTLNDLNTWK SYYLFFPFLS EMKNTPQNES SFKLKNFEIT TPAYDSTGFI PRSISRTLSR FQIELMGQSS SLVLQEFRSA KYQALASIQY IGCLIFLPWI ISRSLKEWFL EPWIKFWWDT YQSQISLNSF QEERASEGLQ EVEEPLWLDK LVSNFLKNQS QDLNIEIYGE TIQLIRMYNE NSIQTILHLL TGMICFTTLG ALFILGKKRL SVLNSWIQES FYSLSDTMKA FAILLLTDLC IGFHSPHGWE VVIGSSLEHL GFAHNKHIIS CFVSTFPVIL DTVSKYWIFR HLNRISPSIV ATYHTMNE* // ID AB086179_41 STANDARD; PRT; 323 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : petA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55362.1 FT PROTEIN_NAME : cytochrome f FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 79362 - 80330 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 19 L(tTa) -> S(tCa) FT EDITING : 53 I(aTt) -> T(aCt) FT EDITING : 74 *(Tag) -> Q(Cag) FT EDITING : 96 *(Taa) -> Q(Caa) FT EDITING : 195 *(Tag) -> Q(Cag) FT EDITING : 246 S(Tca) -> P(Cca) FT EDITING : 275 *(Taa) -> Q(Caa) FT EDITING : 282 P(cCt) -> L(cTt) FT EDITING : 292 S(tCg) -> L(tTg) FT EDITING : 295 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 969 NT; CD 1 aCgcaaaaca gaaaaactta tgcttatgat tggataaaga aatggatgat CD 51 taaatTaatt tcaacgctga taattataaa tacaatggtt tggtcttctg CD 101 tctcagaagc ataccccatc tttgcacagc aaggttatga aaatcctcga CD 151 gaagcaaTtg gacgtattgt atgtgctaat tgtcatttag cgaaaaaacc CD 201 agtggatatt gaagttccaT agtctgtact tccggatact gtatttgagg CD 251 cagtcgttaa aattccttac gatacccaag taaaaTaagt acttgctaat CD 301 ggtaagaaag gagctttaaa tgtaggagct gttcttattt taccggaagg CD 351 attcgaatta gccccttcta atcgggttcc ccccgaaatg aaagaaaaaa CD 401 taggtaatct ttatttccaa agttatcgtc ctgataagaa gaatattctt CD 451 gtagtaggtc cggttcctgg taagaaatac agtgaaatca tatttcccat CD 501 tcttgcaccg aatcctgcaa ctaataaaga tgctcatttt ttaaaatatc CD 551 ctatatatgt gggtggtaat agaggaaggg gaTagattta tcctgatgga CD 601 agtaaaagca acaatacagt ttataatgct tcaacgacag gtataattaa CD 651 aaaagtttta cgtaaagaaa aaggtggata tgaaataatt attgataata CD 701 cattagatgg tcgtcaagtt attgatatcg tacctTcagg accagaactc CD 751 attatttcag agggggaatc cataaaggtg gatcaacctt taacaaataa CD 801 tcctaatgtt ggtggatttg gtTaaggaga tgcagaaata gtacCtcaag CD 851 atgtattacg tgttcaaggt ctttCgttat tctCcgcatc agttatctta CD 901 gcacagatat ttctagtatt gaaaaagaaa caatttgaaa aagttcaatt CD 951 agctgaaatg aatttttaa FT EDITED CDNA CD 1 aTgcaaaaca gaaaaactta tgcttatgat tggataaaga aatggatgat CD 51 taaatCaatt tcaacgctga taattataaa tacaatggtt tggtcttctg CD 101 tctcagaagc ataccccatc tttgcacagc aaggttatga aaatcctcga CD 151 gaagcaaCtg gacgtattgt atgtgctaat tgtcatttag cgaaaaaacc CD 201 agtggatatt gaagttccaC agtctgtact tccggatact gtatttgagg CD 251 cagtcgttaa aattccttac gatacccaag taaaaCaagt acttgctaat CD 301 ggtaagaaag gagctttaaa tgtaggagct gttcttattt taccggaagg CD 351 attcgaatta gccccttcta atcgggttcc ccccgaaatg aaagaaaaaa CD 401 taggtaatct ttatttccaa agttatcgtc ctgataagaa gaatattctt CD 451 gtagtaggtc cggttcctgg taagaaatac agtgaaatca tatttcccat CD 501 tcttgcaccg aatcctgcaa ctaataaaga tgctcatttt ttaaaatatc CD 551 ctatatatgt gggtggtaat agaggaaggg gaCagattta tcctgatgga CD 601 agtaaaagca acaatacagt ttataatgct tcaacgacag gtataattaa CD 651 aaaagtttta cgtaaagaaa aaggtggata tgaaataatt attgataata CD 701 cattagatgg tcgtcaagtt attgatatcg tacctCcagg accagaactc CD 751 attatttcag agggggaatc cataaaggtg gatcaacctt taacaaataa CD 801 tcctaatgtt ggtggatttg gtCaaggaga tgcagaaata gtacTtcaag CD 851 atgtattacg tgttcaaggt ctttTgttat tctTcgcatc agttatctta CD 901 gcacagatat ttctagtatt gaaaaagaaa caatttgaaa aagttcaatt CD 951 agctgaaatg aatttttaa SQ SEQUENCE 323 AA; MQNRKTYAYD WIKKWMIKSI STLIIINTMV WSSVSEAYPI FAQQGYENPR EATGRIVCAN CHLAKKPVDI EVPQSVLPDT VFEAVVKIPY DTQVKQVLAN GKKGALNVGA VLILPEGFEL APSNRVPPEM KEKIGNLYFQ SYRPDKKNIL VVGPVPGKKY SEIIFPILAP NPATNKDAHF LKYPIYVGGN RGRGQIYPDG SKSNNTVYNA STTGIIKKVL RKEKGGYEII IDNTLDGRQV IDIVPPGPEL IISEGESIKV DQPLTNNPNV GGFGQGDAEI VLQDVLRVQG LLLFFASVIL AQIFLVLKKK QFEKVQLAEM NF* // ID AB086179_42 STANDARD; PRT; 41 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbJ FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55363.1 FT PROTEIN_NAME : photosystem II J-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 81738 - 81860 FT DIRECTIONS : negative FT EDITING : 29 L(Ctc) -> F(Ttc) FT EDITING : 30 H(Cat) -> Y(Tat) FT EDITING : 33 H(Cat) -> Y(Tat) FT CODON_START : 1 CL CDNALEN 123 NT; CD 1 atggctaata ccactggacg gattcctctg tggctaatag gtactatagc CD 51 aggtattctt gtaatcggtt tagtaggtat ctttCtcCat ggctcaCatt CD 101 ctggattagg gtcatcttta taa FT EDITED CDNA CD 1 atggctaata ccactggacg gattcctctg tggctaatag gtactatagc CD 51 aggtattctt gtaatcggtt tagtaggtat ctttTtcTat ggctcaTatt CD 101 ctggattagg gtcatcttta taa SQ SEQUENCE 41 AA; MANTTGRIPL WLIGTIAGIL VIGLVGIFFY GSYSGLGSSL * // ID AB086179_44 STANDARD; PRT; 40 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbF FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55365.1 FT PROTEIN_NAME : photosystem II cytochrome b559 4 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 82118 - 82237 FT DIRECTIONS : negative FT EDITING : 23 L(cTc) -> P(cCc) FT EDITING : 26 S(tCt) -> F(tTt) FT EDITING : 27 P(CCt) -> F(TTt) FT EDITING : 28 S(tCa) -> L(tTa) FT EDITING : 33 V(gTa) -> A(gCa) FT CODON_START : 1 CL CDNALEN 120 NT; CD 1 atgactatag atagaactta tcccattttt acagttaggt ggctggctgt CD 51 tcatggacta gctgtacTca cagtttCtCC ttCaggatca atatcagTaa CD 101 tgcagtttat ccaacgataa FT EDITED CDNA CD 1 atgactatag atagaactta tcccattttt acagttaggt ggctggctgt CD 51 tcatggacta gctgtacCca cagtttTtTT ttTaggatca atatcagCaa CD 101 tgcagtttat ccaacgataa SQ SEQUENCE 40 AA; MTIDRTYPIF TVRWLAVHGL AVPTVFFLGS ISAMQFIQR* // ID AB086179_45 STANDARD; PRT; 84 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbE FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55366.1 FT PROTEIN_NAME : photosystem II cytochrome b559 8 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 82247 - 82498 FT DIRECTIONS : negative FT EDITING : 47 S(tCt) -> F(tTt) FT EDITING : 60 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 252 NT; CD 1 atgtctggga atacagggga acgccctttc gctgacatta ttaccagtat CD 51 tcgatactgg gtaatccata gcatcacaat accttccttg tttattgcag CD 101 gttggttatt cgttagcact ggtttggctt atgatgtttC tggaagcccc CD 151 aggccgaatg agtatttcac tgagaatTga caagaggttc cactaattac CD 201 tggccgtttc aattcgttag aacaagttga tgaattcact agatcttttt CD 251 ag FT EDITED CDNA CD 1 atgtctggga atacagggga acgccctttc gctgacatta ttaccagtat CD 51 tcgatactgg gtaatccata gcatcacaat accttccttg tttattgcag CD 101 gttggttatt cgttagcact ggtttggctt atgatgtttT tggaagcccc CD 151 aggccgaatg agtatttcac tgagaatCga caagaggttc cactaattac CD 201 tggccgtttc aattcgttag aacaagttga tgaattcact agatcttttt CD 251 ag SQ SEQUENCE 84 AA; MSGNTGERPF ADIITSIRYW VIHSITIPSL FIAGWLFVST GLAYDVFGSP RPNEYFTENR QEVPLITGRF NSLEQVDEFT RSF* // ID AB086179_46 STANDARD; PRT; 32 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : petL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55367.1 FT PROTEIN_NAME : cytochrome b/f complex 3.5 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 84502 - 84597 FT DIRECTIONS : positive FT EDITING : 20 A(gCt) -> V(gTt) FT EDITING : 23 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 96 NT; CD 1 atgcttactc tatttagcta ctttggattt ctattcgccg ctttaacttt CD 51 agctttagCt ttattcaCtg gtttgaataa gatacaactc atttag FT EDITED CDNA CD 1 atgcttactc tatttagcta ctttggattt ctattcgccg ctttaacttt CD 51 agctttagTt ttattcaTtg gtttgaataa gatacaactc atttag SQ SEQUENCE 32 AA; MLTLFSYFGF LFAALTLALV LFIGLNKIQL I* // ID AB086179_47 STANDARD; PRT; 38 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : petG FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55368.1 FT PROTEIN_NAME : cytochrome b/f complex subunit V FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 84729 - 84842 FT DIRECTIONS : positive FT EDITING : 22 S(tCc) -> F(tTc) FT EDITING : 25 V(gTg) -> A(gCg) FT EDITING : 28 *(Taa) -> Q(Caa) FT EDITING : 31 C(Tgt) -> R(Cgt) FT EDITING : 38 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 114 NT; CD 1 atggttgaag ctttgctgtc tggaatagta ttaggtttga tcccaataac CD 51 tttggctgga ttatCcgtaa ctgTgtatct aTaatatcgg Tgtggtgatc CD 101 aattagattt gCaa FT EDITED CDNA CD 1 atggttgaag ctttgctgtc tggaatagta ttaggtttga tcccaataac CD 51 tttggctgga ttatTcgtaa ctgCgtatct aCaatatcgg Cgtggtgatc CD 101 aattagattt gTaa SQ SEQUENCE 38 AA; MVEALLSGIV LGLIPITLAG LFVTAYLQYR RGDQLDL* // ID AB086179_49 STANDARD; PRT; 66 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl33 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55370.1 FT PROTEIN_NAME : ribosomal protein L33 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 86330 - 86527 FT DIRECTIONS : positive FT EDITING : 44 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 198 NT; CD 1 atggctaaga gtaaagatat aagaatagca attactttag aatgtactag CD 51 ttgctccgaa aatgacgaaa aaagattctc aggtgtttct agatatgtaa CD 101 gtgaaaagaa tcgtcgtaat acacctactT gattagaatt aaagaagttt CD 151 tgtccctatt gctataagca caagattcac agagaaataa aaaaataa FT EDITED CDNA CD 1 atggctaaga gtaaagatat aagaatagca attactttag aatgtactag CD 51 ttgctccgaa aatgacgaaa aaagattctc aggtgtttct agatatgtaa CD 101 gtgaaaagaa tcgtcgtaat acacctactC gattagaatt aaagaagttt CD 151 tgtccctatt gctataagca caagattcac agagaaataa aaaaataa SQ SEQUENCE 66 AA; MAKSKDIRIA ITLECTSCSE NDEKRFSGVS RYVSEKNRRN TPTRLELKKF CPYCYKHKIH REIKK* // ID AB086179_50 STANDARD; PRT; 76 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps18 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55371.1 FT PROTEIN_NAME : ribosomal protein S18 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 86559 - 86786 FT DIRECTIONS : positive FT EDITING : 30 *(Tga) -> R(Cga) FT EDITING : 63 C(Tgc) -> R(Cgc) FT CODON_START : 1 CL CDNALEN 228 NT; CD 1 atgaacaaat ttaaacgatc ttctcgtaga cggttgccac ctattagatc CD 51 tggagaaatt attgattata agaatacaag tttactcTga agattcatta CD 101 gtgaacaagg aaaaatttta tctagacgaa tgaataaatt gacttcgaaa CD 151 caacaacgtt tagtaactgt tgctattaaa agggctTgca ttttagcgtt CD 201 gttacctttc ctcaataatg aaagttga FT EDITED CDNA CD 1 atgaacaaat ttaaacgatc ttctcgtaga cggttgccac ctattagatc CD 51 tggagaaatt attgattata agaatacaag tttactcCga agattcatta CD 101 gtgaacaagg aaaaatttta tctagacgaa tgaataaatt gacttcgaaa CD 151 caacaacgtt tagtaactgt tgctattaaa agggctCgca ttttagcgtt CD 201 gttacctttc ctcaataatg aaagttga SQ SEQUENCE 76 AA; MNKFKRSSRR RLPPIRSGEI IDYKNTSLLR RFISEQGKIL SRRMNKLTSK QQRLVTVAIK RARILALLPF LNNES* // ID AB086179_51 STANDARD; PRT; 113 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl20 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55372.1 FT PROTEIN_NAME : ribosomal protein L20 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 87066 - 87404 FT DIRECTIONS : negative FT EDITING : 29 P(Cca) -> S(Tca) FT EDITING : 97 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 339 NT; CD 1 atgactagag tgaaacgtgg ttatgtagct cggagacgtc gtaaaaatat CD 51 tcttaaactt acatcgggat ttcaaggagc tcatCcaaca ctttttcgaa CD 101 ctgccaatca gcaaggaatg aaatctttaa cttcctctca tcgggataga CD 151 ggtaaacgaa aaagagattt ccgtcgtcta tggattacta gaataaatgc CD 201 agcagcccga aggagtaaaa aatcttatca tacattaatt caggaattgt CD 251 ataagagaaa aatactttta aatagaaaaa tgcttgctTa aatagctata CD 301 ttagatacat attgtttctc cactttattg ggggattaa FT EDITED CDNA CD 1 atgactagag tgaaacgtgg ttatgtagct cggagacgtc gtaaaaatat CD 51 tcttaaactt acatcgggat ttcaaggagc tcatTcaaca ctttttcgaa CD 101 ctgccaatca gcaaggaatg aaatctttaa cttcctctca tcgggataga CD 151 ggtaaacgaa aaagagattt ccgtcgtcta tggattacta gaataaatgc CD 201 agcagcccga aggagtaaaa aatcttatca tacattaatt caggaattgt CD 251 ataagagaaa aatactttta aatagaaaaa tgcttgctCa aatagctata CD 301 ttagatacat attgtttctc cactttattg ggggattaa SQ SEQUENCE 113 AA; MTRVKRGYVA RRRRKNILKL TSGFQGAHST LFRTANQQGM KSLTSSHRDR GKRKRDFRRL WITRINAAAR RSKKSYHTLI QELYKRKILL NRKMLAQIAI LDTYCFSTLL GD* // ID AB086179_52 STANDARD; PRT; 205 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : clpP FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55373.1 FT PROTEIN_NAME : ATP-dependent protease proteolytic subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 24/2 FT INTRON 122/0 FT EDITING : 20 R(Cgg) -> W(Tgg) FT EDITING : 34 L(Ctt) -> F(Ttt) FT EDITING : 37 *(Taa) -> Q(Caa) FT EDITING : 65 L(Cta) -> L(Tta) FT EDITING : 69 F(tTt) -> S(tCt) FT EDITING : 93 M(aTg) -> T(aCg) FT EDITING : 105 P(CCC) -> F(TTT) FT EDITING : 106 T(aCt) -> I(aTt) FT EDITING : 148 S(tCg) -> L(tTg) FT EDITING : 173 T(aCg) -> M(aTg) FT EDITING : 189 T(aCt) -> I(aTt) FT EDITING : 190 A(gCt) -> V(gTt) FT CODON_START : 1 CL CDNALEN 615 NT; CD 1 atgccgattg gtgtgccgaa agtccctttt cgtctccctg gagaagaaga CD 51 tgcagttCgg attgatgtat acaaccgact ttatagagaa cgattgcttC CD 101 ttctgggtTa acatgtagat gatgaaatag caaatcaatt aattggtatc CD 151 atgatgtact taaatgggga agatgaaagt aaggatatgt atCtatatat CD 201 aaattTtccc ggtggagctg tattagctgg aatatctgtt tatgatacaa CD 251 tgcaattcgt agtaccagat gtccataTga tttgcatggg attagctgct CD 301 tcaatgggat ctCCCaCttt aactggagga gagattacta aacgtatagc CD 351 cttaccccac gctaggatta tgattcatca acctgctagt tcttattatg CD 401 atggacaagc cggagagtgt atcatggaag ctgaagaagt ttCgaagctt CD 451 cgcgattgta taactaaagt ctatgtacaa agaacaggca agcctttatg CD 501 ggttatttct gaagataCgg aaagagatgt ttttatgtca gcgaaagaag CD 551 cacaaattta tggtaCtgCt gattttgtag ctatagaaac aacttctaat CD 601 tctttgacta actaa FT EDITED CDNA CD 1 atgccgattg gtgtgccgaa agtccctttt cgtctccctg gagaagaaga CD 51 tgcagttTgg attgatgtat acaaccgact ttatagagaa cgattgcttT CD 101 ttctgggtCa acatgtagat gatgaaatag caaatcaatt aattggtatc CD 151 atgatgtact taaatgggga agatgaaagt aaggatatgt atTtatatat CD 201 aaattCtccc ggtggagctg tattagctgg aatatctgtt tatgatacaa CD 251 tgcaattcgt agtaccagat gtccataCga tttgcatggg attagctgct CD 301 tcaatgggat ctTTTaTttt aactggagga gagattacta aacgtatagc CD 351 cttaccccac gctaggatta tgattcatca acctgctagt tcttattatg CD 401 atggacaagc cggagagtgt atcatggaag ctgaagaagt ttTgaagctt CD 451 cgcgattgta taactaaagt ctatgtacaa agaacaggca agcctttatg CD 501 ggttatttct gaagataTgg aaagagatgt ttttatgtca gcgaaagaag CD 551 cacaaattta tggtaTtgTt gattttgtag ctatagaaac aacttctaat CD 601 tctttgacta actaa SQ SEQUENCE 205 AA; MPIGVPKVPF RLPGEEDAVW IDVYNRLYRE RLLFLGQHVD DEIANQLIGI MMYLNGEDES KDMYLYINSP GGAVLAGISV YDTMQFVVPD VHTICMGLAA SMGSFILTGG EITKRIALPH ARIMIHQPAS SYYDGQAGEC IMEAEEVLKL RDCITKVYVQ RTGKPLWVIS EDMERDVFMS AKEAQIYGIV DFVAIETTSN SLTN* // ID AB086179_53 STANDARD; PRT; 509 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55374.1 FT PROTEIN_NAME : photosystem II 47 kDa protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 91107 - 92633 FT DIRECTIONS : positive FT EDITING : 5 R(Cgg) -> W(Tgg) FT EDITING : 13 P(cCa) -> L(cTa) FT EDITING : 16 L(cTt) -> P(cCt) FT EDITING : 18 C(Tgt) -> R(Cgt) FT EDITING : 21 V(gTa) -> A(gCa) FT EDITING : 54 L(TTa) -> P(CCa) FT EDITING : 64 L(cTt) -> P(cCt) FT EDITING : 100 Y(Tat) -> H(Cat) FT EDITING : 103 P(cCa) -> L(cTa) FT EDITING : 104 F(tTt) -> S(tCt) FT EDITING : 107 S(tCa) -> L(tTa) FT EDITING : 120 S(tCg) -> L(tTg) FT EDITING : 122 S(tCa) -> L(tTa) FT EDITING : 132 F(tTt) -> S(tCt) FT EDITING : 133 S(tCa) -> L(tTa) FT EDITING : 135 S(tCg) -> L(tTg) FT EDITING : 156 S(tCt) -> F(tTt) FT EDITING : 216 Y(Tat) -> H(Cat) FT EDITING : 222 F(TTt) -> P(CCt) FT EDITING : 264 S(Tca) -> P(Cca) FT EDITING : 267 S(tCa) -> L(tTa) FT EDITING : 268 S(tCt) -> F(tTt) FT EDITING : 277 *(Taa) -> Q(Caa) FT EDITING : 319 S(Tca) -> P(Cca) FT EDITING : 343 Y(Tac) -> H(Cac) FT EDITING : 363 S(tCt) -> F(tTt) FT EDITING : 370 P(cCa) -> L(cTa) FT EDITING : 382 S(Tca) -> P(Cca) FT EDITING : 383 S(tCt) -> F(tTt) FT EDITING : 423 C(Tgt) -> R(Cgt) FT EDITING : 425 *(Taa) -> Q(Caa) FT EDITING : 430 S(tCt) -> F(tTt) FT EDITING : 432 S(tCt) -> F(tTt) FT EDITING : 443 S(tCc) -> F(tTc) FT EDITING : 461 P(cCt) -> L(cTt) FT EDITING : 462 S(tCc) -> F(tTc) FT EDITING : 463 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 1527 NT; CD 1 atgggtttac ctCggtatcg tgttcatacg gtcgtacCaa atgatcTtgg CD 51 cTgtttaatt gTagtacatc taatgcatac tgctttagtt tctggttggg CD 101 ccggttctat ggctttgtat gaattagcag tttttgatcc ttctgatccc CD 151 gttcttgatT Taatgtggag acagggcatg tttgttatac Tttttatgac CD 201 tcgtctagga attacaaaat cttggggtgg ttggagtatt actggagaaa CD 251 ctgtgactaa tgcaggtatt tggagttacg agggtgttgc cgcggttTat CD 301 atcgtacCat TtggcttgtC attcttggca gctatttggc attgggtata CD 351 ttgggattCg gaatCatttc gtgacgaacg tacaggaaaa ccttTttCag CD 401 attCgcctaa aatttttgga attcatttat tcctttcagg agtactttgt CD 451 tttggatttg gagcatCtca tgtaacaggt ttattcggtc caggaatatg CD 501 ggtttccgat ccttatggac taacgggaaa ggtagaacca gtggctccag CD 551 cttggggagc agaaggtttc gatcccttcg ttcctggggg aatagcctct CD 601 catcatatcg cagcaggtat tttaggtata ttagcaggcc tattcTatct CD 651 tagtgttcgt cccTTtcaaa ggttatacaa aggattacgt atgggtaatg CD 701 ttgaaactgt tttatctagc agtatcgctg ctgtattttt tgcagctttc CD 751 gtagttgctg gaacaatgtg gtacgggtct gcagctactT caatagaatC CD 801 atCtggtcct actcgttacc aatgggacTa aggtttcttc caacaagaaa CD 851 tagatcgtag gattcgttct agcaaggctg agaatcttag tttatcagaa CD 901 gcttggtcta aaattcctga aaaattagcg ttttacgatt atattggtaa CD 951 caatTcagct aaagggggat tatttagagc aggtgcaatg gataatggag CD 1001 atggaatagc tgttggttgg ttaggtTacg ctgtctttaa agataaagaa CD 1051 gggcatgaac tcttcgtacg tcgtatgcct actttttCtg aaacgtttcc CD 1101 agtagttcCa gtagatgaag aaggaattgt tagagcagat atcTcatCta CD 1151 ggagagcaga atctaaatat agtgttgagc aagtaggtgt aattgttgaa CD 1201 ttttacggtg gtgaactcga tggtgttagt tttagcgatc ctgttacagt CD 1251 gaagaagtat gctagaTgtg ctTaattggg tgaaatttCt gaatCtgata CD 1301 gggctacttt aaagtctgat ggtgtctCcc gtagtagtcc aagaggttgg CD 1351 tttacttttg gtcacgctac atttgctctt cCttCctCct tcgggcatat CD 1401 ctggcacggt gccagaactc tgttcagaga tgtttttgcc ggtattgact CD 1451 cagatttaga tgctcaagtt gaatttggag cttttgaaaa attgggagat CD 1501 ccaactacta agagacaagt ggtgtga FT EDITED CDNA CD 1 atgggtttac ctTggtatcg tgttcatacg gtcgtacTaa atgatcCtgg CD 51 cCgtttaatt gCagtacatc taatgcatac tgctttagtt tctggttggg CD 101 ccggttctat ggctttgtat gaattagcag tttttgatcc ttctgatccc CD 151 gttcttgatC Caatgtggag acagggcatg tttgttatac Cttttatgac CD 201 tcgtctagga attacaaaat cttggggtgg ttggagtatt actggagaaa CD 251 ctgtgactaa tgcaggtatt tggagttacg agggtgttgc cgcggttCat CD 301 atcgtacTat CtggcttgtT attcttggca gctatttggc attgggtata CD 351 ttgggattTg gaatTatttc gtgacgaacg tacaggaaaa ccttCttTag CD 401 attTgcctaa aatttttgga attcatttat tcctttcagg agtactttgt CD 451 tttggatttg gagcatTtca tgtaacaggt ttattcggtc caggaatatg CD 501 ggtttccgat ccttatggac taacgggaaa ggtagaacca gtggctccag CD 551 cttggggagc agaaggtttc gatcccttcg ttcctggggg aatagcctct CD 601 catcatatcg cagcaggtat tttaggtata ttagcaggcc tattcCatct CD 651 tagtgttcgt cccCCtcaaa ggttatacaa aggattacgt atgggtaatg CD 701 ttgaaactgt tttatctagc agtatcgctg ctgtattttt tgcagctttc CD 751 gtagttgctg gaacaatgtg gtacgggtct gcagctactC caatagaatT CD 801 atTtggtcct actcgttacc aatgggacCa aggtttcttc caacaagaaa CD 851 tagatcgtag gattcgttct agcaaggctg agaatcttag tttatcagaa CD 901 gcttggtcta aaattcctga aaaattagcg ttttacgatt atattggtaa CD 951 caatCcagct aaagggggat tatttagagc aggtgcaatg gataatggag CD 1001 atggaatagc tgttggttgg ttaggtCacg ctgtctttaa agataaagaa CD 1051 gggcatgaac tcttcgtacg tcgtatgcct actttttTtg aaacgtttcc CD 1101 agtagttcTa gtagatgaag aaggaattgt tagagcagat atcCcatTta CD 1151 ggagagcaga atctaaatat agtgttgagc aagtaggtgt aattgttgaa CD 1201 ttttacggtg gtgaactcga tggtgttagt tttagcgatc ctgttacagt CD 1251 gaagaagtat gctagaCgtg ctCaattggg tgaaatttTt gaatTtgata CD 1301 gggctacttt aaagtctgat ggtgtctTcc gtagtagtcc aagaggttgg CD 1351 tttacttttg gtcacgctac atttgctctt cTttTctTct tcgggcatat CD 1401 ctggcacggt gccagaactc tgttcagaga tgtttttgcc ggtattgact CD 1451 cagatttaga tgctcaagtt gaatttggag cttttgaaaa attgggagat CD 1501 ccaactacta agagacaagt ggtgtga SQ SEQUENCE 509 AA; MGLPWYRVHT VVLNDPGRLI AVHLMHTALV SGWAGSMALY ELAVFDPSDP VLDPMWRQGM FVIPFMTRLG ITKSWGGWSI TGETVTNAGI WSYEGVAAVH IVLSGLLFLA AIWHWVYWDL ELFRDERTGK PSLDLPKIFG IHLFLSGVLC FGFGAFHVTG LFGPGIWVSD PYGLTGKVEP VAPAWGAEGF DPFVPGGIAS HHIAAGILGI LAGLFHLSVR PPQRLYKGLR MGNVETVLSS SIAAVFFAAF VVAGTMWYGS AATPIELFGP TRYQWDQGFF QQEIDRRIRS SKAENLSLSE AWSKIPEKLA FYDYIGNNPA KGGLFRAGAM DNGDGIAVGW LGHAVFKDKE GHELFVRRMP TFFETFPVVL VDEEGIVRAD IPFRRAESKY SVEQVGVIVE FYGGELDGVS FSDPVTVKKY ARRAQLGEIF EFDRATLKSD GVFRSSPRGW FTFGHATFAL LFFFGHIWHG ARTLFRDVFA GIDSDLDAQV EFGAFEKLGD PTTKRQVV* // ID AB086179_54 STANDARD; PRT; 41 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbT FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55375.1 FT PROTEIN_NAME : photosystem II T-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 92788 - 92910 FT DIRECTIONS : positive FT EDITING : 14 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 123 NT; CD 1 atggaagcat tggtttatac atttttgttg gtaggcactt Caggaataat CD 51 ctttttcgct attttttttc gagacccacc taaagttcca agtaagggag CD 101 ttccgagcaa gggaaagaaa taa FT EDITED CDNA CD 1 atggaagcat tggtttatac atttttgttg gtaggcactt Taggaataat CD 51 ctttttcgct attttttttc gagacccacc taaagttcca agtaagggag CD 101 ttccgagcaa gggaaagaaa taa SQ SEQUENCE 41 AA; MEALVYTFLL VGTLGIIFFA IFFRDPPKVP SKGVPSKGKK * // ID AB086179_57 STANDARD; PRT; 75 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbH FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55378.1 FT PROTEIN_NAME : photosystem II 10 kDa phosphoprotein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 93225 - 93449 FT DIRECTIONS : positive FT EDITING : 23 S(tCa) -> L(tTa) FT EDITING : 53 S(tCt) -> F(tTt) FT EDITING : 54 S(tCa) -> L(tTa) FT EDITING : 60 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atggctacac aaattattga tgacactcct aagactaaag ggagacgaag CD 51 tggtatagga aatatatCaa aaccacttaa ttcagaatat ggtaaagtcg CD 101 ctcccggatg gggaactact cctctaatgg gtatagcaat gggtttattt CD 151 gcagtttCtt Cagttattat cttagaacCc tataattctt ctgttttatt CD 201 agatggagtt tccgtaagct ggtag FT EDITED CDNA CD 1 atggctacac aaattattga tgacactcct aagactaaag ggagacgaag CD 51 tggtatagga aatatatTaa aaccacttaa ttcagaatat ggtaaagtcg CD 101 ctcccggatg gggaactact cctctaatgg gtatagcaat gggtttattt CD 151 gcagtttTtt Tagttattat cttagaacTc tataattctt ctgttttatt CD 201 agatggagtt tccgtaagct ggtag SQ SEQUENCE 75 AA; MATQIIDDTP KTKGRRSGIG NILKPLNSEY GKVAPGWGTT PLMGIAMGLF AVFLVIILEL YNSSVLLDGV SVSW* // ID AB086179_58 STANDARD; PRT; 216 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : petB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55379.1 FT PROTEIN_NAME : cytochrome b6 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 3/0 FT EDITING : 27 F(TTt) -> P(CCt) FT EDITING : 33 S(tCt) -> F(tTt) FT EDITING : 58 H(Cat) -> Y(Tat) FT EDITING : 60 L(cTa) -> P(cCa) FT EDITING : 89 L(tTa) -> S(tCa) FT EDITING : 95 S(tCa) -> L(tTa) FT EDITING : 99 P(cCa) -> L(cTa) FT EDITING : 103 C(Tgc) -> R(Cgc) FT EDITING : 113 L(cTt) -> P(cCt) FT EDITING : 124 S(tCa) -> L(tTa) FT EDITING : 127 S(tCa) -> L(tTa) FT EDITING : 142 *(Taa) -> Q(Caa) FT EDITING : 159 S(Tct) -> P(Cct) FT EDITING : 177 *(Taa) -> Q(Caa) FT EDITING : 188 I(aTt) -> T(aCt) FT EDITING : 191 S(tCa) -> L(tTa) FT EDITING : 193 P(cCc) -> L(cTc) FT EDITING : 198 P(cCt) -> L(cTt) FT EDITING : 200 S(tCa) -> L(tTa) FT EDITING : 203 S(tCc) -> F(tTc) FT EDITING : 214 L(cTa) -> P(cCa) FT CODON_START : 1 CL CDNALEN 648 NT; CD 1 atgggtaaag tatacgattg gttcgaggaa cgtctagaaa ttcaagcgat CD 51 tgcggatgat ataactagta aatatgttTT tcctcatgtg aatatatCtt CD 101 attgtttagg tggaattaca ttaacttgtt tcctagtaca agtagctagt CD 151 ggttttgcga tgactttcta cCatcgtcTa acagttacag aagcttttgc CD 201 ttctgttcaa tacataatga ctgaagttaa ctttggttgg ttaattagat CD 251 cagttcatag atggtTagcc agtatgatgg tttCaatgat gattcCacat CD 301 gtatttTgcg tgtatcttac aggtggtttc aaaaaacTtc gtgaattgac CD 351 ttgggttaca ggtgtaattt CagctgtatC aacggtttct ttcggtgtaa CD 401 ctggttattc cttaccttgg gatTaaattg gttattgggc cgtaaaaata CD 451 gtgactggtg tacctgaggc tattTcttta gtgggatcct ccttagttga CD 501 gttactacgt ggaagtgtta gtgtgggtTa atctacattg actcgttttt CD 551 atagtttaca taTttttgta tCacctcCcc ttactgctgt acCtatgtCa CD 601 atgcattCct tgatgatccg taagcaaggt atatcgggtc Tattatga FT EDITED CDNA CD 1 atgggtaaag tatacgattg gttcgaggaa cgtctagaaa ttcaagcgat CD 51 tgcggatgat ataactagta aatatgttCC tcctcatgtg aatatatTtt CD 101 attgtttagg tggaattaca ttaacttgtt tcctagtaca agtagctagt CD 151 ggttttgcga tgactttcta cTatcgtcCa acagttacag aagcttttgc CD 201 ttctgttcaa tacataatga ctgaagttaa ctttggttgg ttaattagat CD 251 cagttcatag atggtCagcc agtatgatgg tttTaatgat gattcTacat CD 301 gtatttCgcg tgtatcttac aggtggtttc aaaaaacCtc gtgaattgac CD 351 ttgggttaca ggtgtaattt TagctgtatT aacggtttct ttcggtgtaa CD 401 ctggttattc cttaccttgg gatCaaattg gttattgggc cgtaaaaata CD 451 gtgactggtg tacctgaggc tattCcttta gtgggatcct ccttagttga CD 501 gttactacgt ggaagtgtta gtgtgggtCa atctacattg actcgttttt CD 551 atagtttaca taCttttgta tTacctcTcc ttactgctgt acTtatgtTa CD 601 atgcattTct tgatgatccg taagcaaggt atatcgggtc Cattatga SQ SEQUENCE 216 AA; MGKVYDWFEE RLEIQAIADD ITSKYVPPHV NIFYCLGGIT LTCFLVQVAS GFAMTFYYRP TVTEAFASVQ YIMTEVNFGW LIRSVHRWSA SMMVLMMILH VFRVYLTGGF KKPRELTWVT GVILAVLTVS FGVTGYSLPW DQIGYWAVKI VTGVPEAIPL VGSSLVELLR GSVSVGQSTL TRFYSLHTFV LPLLTAVLML MHFLMIRKQG ISGPL* // ID AB086179_59 STANDARD; PRT; 161 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : petD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55380.1 FT PROTEIN_NAME : cytochrome b/f complex subunit IV FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 3/2 FT EDITING : 16 V(gTt) -> A(gCt) FT EDITING : 30 L(cTt) -> P(cCt) FT EDITING : 36 S(TCt) -> L(CTt) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 38 H(Cat) -> Y(Tat) FT EDITING : 40 S(tCt) -> F(tTt) FT EDITING : 41 L(TTa) -> P(CCa) FT EDITING : 72 L(cTt) -> P(cCt) FT EDITING : 85 S(tCt) -> F(tTt) FT EDITING : 86 *(Taa) -> Q(Caa) FT EDITING : 88 P(cCc) -> L(cTc) FT EDITING : 89 C(Tgt) -> R(Cgt) FT EDITING : 105 L(cTt) -> P(cCt) FT EDITING : 117 A(gCt) -> V(gTt) FT EDITING : 121 *(Taa) -> Q(Caa) FT EDITING : 123 S(Tcg) -> P(Ccg) FT EDITING : 133 F(ttT) -> F(ttC) FT EDITING : 134 P(CCg) -> L(TTg) FT EDITING : 161 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 483 NT; CD 1 atgggagtaa caaagaaacc cgatttaagt gatcctgtat taagggTtaa CD 51 attagctaaa ggtatgggac ataattatta tggagaacTt gcttggccta CD 101 atgatTCttC aCatatctCt TTagtagtaa ttttaggtac tattgcatgt CD 151 actgtcggtt tagccgtctt agaaccttct atgattggtg aaccggcaaa CD 201 tccatttgct acccTtctag aaatattgcc tgaatggtat ttctttcctg CD 251 tatCtTaaat acCcTgtaca gtacctaata aactattagg tgttcttcta CD 301 atggctgcag tacTtgcggg attattaaca gtaccttttt tagaaaatgC CD 351 taataaattt TaaaatTcgt ttcgtcgtcc agtagctaca acaattttTC CD 401 Cgattggtac tgcagtagct atttggctgg gaattggggc agctctacct CD 451 attgataaat cattaacttt aggtctttct Caa FT EDITED CDNA CD 1 atgggagtaa caaagaaacc cgatttaagt gatcctgtat taagggCtaa CD 51 attagctaaa ggtatgggac ataattatta tggagaacCt gcttggccta CD 101 atgatCTttT aTatatctTt CCagtagtaa ttttaggtac tattgcatgt CD 151 actgtcggtt tagccgtctt agaaccttct atgattggtg aaccggcaaa CD 201 tccatttgct acccCtctag aaatattgcc tgaatggtat ttctttcctg CD 251 tatTtCaaat acTcCgtaca gtacctaata aactattagg tgttcttcta CD 301 atggctgcag tacCtgcggg attattaaca gtaccttttt tagaaaatgT CD 351 taataaattt CaaaatCcgt ttcgtcgtcc agtagctaca acaattttCT CD 401 Tgattggtac tgcagtagct atttggctgg gaattggggc agctctacct CD 451 attgataaat cattaacttt aggtctttct Taa SQ SEQUENCE 161 AA; MGVTKKPDLS DPVLRAKLAK GMGHNYYGEP AWPNDLLYIF PVVILGTIAC TVGLAVLEPS MIGEPANPFA TPLEILPEWY FFPVFQILRT VPNKLLGVLL MAAVPAGLLT VPFLENVNKF QNPFRRPVAT TIFLIGTAVA IWLGIGAALP IDKSLTLGLS * // ID AB086179_60 STANDARD; PRT; 341 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpoA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55381.1 FT PROTEIN_NAME : RNA polymerase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 96875 - 97897 FT DIRECTIONS : negative FT EDITING : 31 C(Tgc) -> R(Cgc) FT EDITING : 35 P(Cct) -> S(Tct) FT EDITING : 50 *(Tga) -> R(Cga) FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 88 S(tCa) -> L(tTa) FT EDITING : 96 P(cCt) -> L(cTt) FT EDITING : 104 *(Taa) -> Q(Caa) FT EDITING : 170 S(tCt) -> F(tTt) FT EDITING : 176 S(tCt) -> F(tTt) FT EDITING : 196 *(Taa) -> Q(Caa) FT EDITING : 209 P(cCc) -> L(cTc) FT EDITING : 211 F(TTt) -> P(CCt) FT EDITING : 225 S(tCa) -> L(tTa) FT EDITING : 226 S(tCt) -> F(tTt) FT EDITING : 285 G(ggC) -> G(ggT) FT EDITING : 297 F(Ttt) -> L(Ctt) FT EDITING : 298 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1023 NT; CD 1 atgattcaaa atgaaatacc aatccctgct gaagcgctgc aatggaagtg CD 51 catcgaatct aaaatcgaca gtgagcgtct tcactatggt Tgctttgcta CD 101 taCctccact tagaccaggt caagctaata ccgttggaat tgctataTga CD 151 agagcctCac tcggagaaat agaggggaca tgtattacat atgtaaaatt CD 201 tgaaaaagtg acacatgaat attctaccat aatggggatt caggaatcag CD 251 tacatgatat ttCaataaat ttaaaagaaa ttgtacCtaa gagtaattct CD 301 tataaaactT aagaagcatc tatttctatt cttgggccta aaagagtaac CD 351 tgctgaagac attgtattac catcctccgt cgaggtaatt gatgctacgc CD 401 aacacatagc caccataact aaagctgttt attttaatat taaattggga CD 451 ataagaaaag accgtggata tcgtatagaa aatcctgtaa agtatgaaga CD 501 tggaaattCt gctgtcaacg ctgcttCtac gcctattaga aatgctaatt CD 551 atagtgttca ttcttttgaa aatgagaagg aaaaaTaaga aatacttttt CD 601 attgaagtat ggactaatgg aagtcCcacc TTtaaagaag cacttcgtga CD 651 agcttctcaa agtttaatta attCatCtat tccccttttg catgagaaaa CD 701 aggaacggga gaatcgtaaa ctcgaaaata aagatgaata taatgtgctt CD 751 cgttcttgct tctcattgac taatatagga gaagtaagga aagaaatttc CD 801 attcaaacat atatttattg atcaactaga attacctgcg agagcatata CD 851 atggCctcaa aaaggttgat gtacatacta tatcagacTt ttCaaattat CD 901 agtcaagaag atttgatgaa gataaaaaac tttgggaaga agtctattca CD 951 acaagtagta gaggctttac aaaaacattt tgcaatacat ttaccaaaaa CD 1001 ataaattttc tattaatgat taa FT EDITED CDNA CD 1 atgattcaaa atgaaatacc aatccctgct gaagcgctgc aatggaagtg CD 51 catcgaatct aaaatcgaca gtgagcgtct tcactatggt Cgctttgcta CD 101 taTctccact tagaccaggt caagctaata ccgttggaat tgctataCga CD 151 agagcctTac tcggagaaat agaggggaca tgtattacat atgtaaaatt CD 201 tgaaaaagtg acacatgaat attctaccat aatggggatt caggaatcag CD 251 tacatgatat ttTaataaat ttaaaagaaa ttgtacTtaa gagtaattct CD 301 tataaaactC aagaagcatc tatttctatt cttgggccta aaagagtaac CD 351 tgctgaagac attgtattac catcctccgt cgaggtaatt gatgctacgc CD 401 aacacatagc caccataact aaagctgttt attttaatat taaattggga CD 451 ataagaaaag accgtggata tcgtatagaa aatcctgtaa agtatgaaga CD 501 tggaaattTt gctgtcaacg ctgcttTtac gcctattaga aatgctaatt CD 551 atagtgttca ttcttttgaa aatgagaagg aaaaaCaaga aatacttttt CD 601 attgaagtat ggactaatgg aagtcTcacc CCtaaagaag cacttcgtga CD 651 agcttctcaa agtttaatta attTatTtat tccccttttg catgagaaaa CD 701 aggaacggga gaatcgtaaa ctcgaaaata aagatgaata taatgtgctt CD 751 cgttcttgct tctcattgac taatatagga gaagtaagga aagaaatttc CD 801 attcaaacat atatttattg atcaactaga attacctgcg agagcatata CD 851 atggTctcaa aaaggttgat gtacatacta tatcagacCt ttTaaattat CD 901 agtcaagaag atttgatgaa gataaaaaac tttgggaaga agtctattca CD 951 acaagtagta gaggctttac aaaaacattt tgcaatacat ttaccaaaaa CD 1001 ataaattttc tattaatgat taa SQ SEQUENCE 341 AA; MIQNEIPIPA EALQWKCIES KIDSERLHYG RFAISPLRPG QANTVGIAIR RALLGEIEGT CITYVKFEKV THEYSTIMGI QESVHDILIN LKEIVLKSNS YKTQEASISI LGPKRVTAED IVLPSSVEVI DATQHIATIT KAVYFNIKLG IRKDRGYRIE NPVKYEDGNF AVNAAFTPIR NANYSVHSFE NEKEKQEILF IEVWTNGSLT PKEALREASQ SLINLFIPLL HEKKERENRK LENKDEYNVL RSCFSLTNIG EVRKEISFKH IFIDQLELPA RAYNGLKKVD VHTISDLLNY SQEDLMKIKN FGKKSIQQVV EALQKHFAIH LPKNKFSIND * // ID AB086179_61 STANDARD; PRT; 131 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps11 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55382.1 FT PROTEIN_NAME : ribosomal protein S11 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 97935 - 98327 FT DIRECTIONS : negative FT EDITING : 41 *(Taa) -> Q(Caa) FT EDITING : 47 F(tTt) -> S(tCt) FT EDITING : 82 *(Taa) -> Q(Caa) FT EDITING : 118 L(cTg) -> P(cCg) FT CODON_START : 1 CL CDNALEN 393 NT; CD 1 atggcaaaat ctataagaaa aataaattta cgtaaaggta aacgtagaat CD 51 acctagggga gttactcata tccaagccag ttttaataat acaattatta CD 101 ctgttacaga tgtacgcgga Taagtggttt cttggtcttT tgcgggtgct CD 151 tgtggattca aaggtacaaa gaaaagtaca ccttttgctg ctcagactgc CD 201 agcagaaaat gctattcgta ttttaattga tcagggtatg aaaTaagcag CD 251 aagttatgat tagtggtcct ggtcctggaa gagatacagc attacgagct CD 301 attcgtagga gtggtgtagt acttagttat gtacgtgacg taacccctat CD 351 acTgcataat ggatgtaggc ctcctaagaa gagacgtgta taa FT EDITED CDNA CD 1 atggcaaaat ctataagaaa aataaattta cgtaaaggta aacgtagaat CD 51 acctagggga gttactcata tccaagccag ttttaataat acaattatta CD 101 ctgttacaga tgtacgcgga Caagtggttt cttggtcttC tgcgggtgct CD 151 tgtggattca aaggtacaaa gaaaagtaca ccttttgctg ctcagactgc CD 201 agcagaaaat gctattcgta ttttaattga tcagggtatg aaaCaagcag CD 251 aagttatgat tagtggtcct ggtcctggaa gagatacagc attacgagct CD 301 attcgtagga gtggtgtagt acttagttat gtacgtgacg taacccctat CD 351 acCgcataat ggatgtaggc ctcctaagaa gagacgtgta taa SQ SEQUENCE 131 AA; MAKSIRKINL RKGKRRIPRG VTHIQASFNN TIITVTDVRG QVVSWSSAGA CGFKGTKKST PFAAQTAAEN AIRILIDQGM KQAEVMISGP GPGRDTALRA IRRSGVVLSY VRDVTPIPHN GCRPPKKRRV * // ID AB086179_62 STANDARD; PRT; 38 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl36 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55383.1 FT PROTEIN_NAME : ribosomal protein L36 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 98472 - 98585 FT DIRECTIONS : negative FT EDITING : 15 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 114 NT; CD 1 atgaagattc gtgcttctgt tcgcaaaatt tgtgagaatt gtTgattaat CD 51 ccgtaggcga agacgagtca tggtggtttg ttccaatcct aaacataaac CD 101 agaaacaagg ataa FT EDITED CDNA CD 1 atgaagattc gtgcttctgt tcgcaaaatt tgtgagaatt gtCgattaat CD 51 ccgtaggcga agacgagtca tggtggtttg ttccaatcct aaacataaac CD 101 agaaacaagg ataa SQ SEQUENCE 38 AA; MKIRASVRKI CENCRLIRRR RRVMVVCSNP KHKQKQG* // ID AB086179_63 STANDARD; PRT; 79 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : infA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55384.1 FT PROTEIN_NAME : initiation factor 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 98683 - 98919 FT DIRECTIONS : negative FT EDITING : 13 A(gCt) -> V(gTt) FT EDITING : 46 *(Tga) -> R(Cga) FT EDITING : 66 C(Tgt) -> R(Cgt) FT CODON_START : 1 CL CDNALEN 237 NT; CD 1 atggagaaac aaaatttgat tgatatggaa ggtgttgCta ctgaatcact CD 51 ccccaatgct atgtttcgag tttgtctaga taatggatgc caagtcttaa CD 101 ctcacatttc aggaaaaatt cgacgtaatt atataTgaat attaccggga CD 151 gatagagtaa aagtagaatt aagtccttat gatctgacta aaggaTgtat CD 201 aacttatcga cttcgtacta aatcttcaaa tccttaa FT EDITED CDNA CD 1 atggagaaac aaaatttgat tgatatggaa ggtgttgTta ctgaatcact CD 51 ccccaatgct atgtttcgag tttgtctaga taatggatgc caagtcttaa CD 101 ctcacatttc aggaaaaatt cgacgtaatt atataCgaat attaccggga CD 151 gatagagtaa aagtagaatt aagtccttat gatctgacta aaggaCgtat CD 201 aacttatcga cttcgtacta aatcttcaaa tccttaa SQ SEQUENCE 79 AA; MEKQNLIDME GVVTESLPNA MFRVCLDNGC QVLTHISGKI RRNYIRILPG DRVKVELSPY DLTKGRITYR LRTKSSNP* // ID AB086179_64 STANDARD; PRT; 133 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps8 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55385.1 FT PROTEIN_NAME : ribosomal protein S8 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 99068 - 99466 FT DIRECTIONS : negative FT EDITING : 31 P(cCg) -> L(cTg) FT EDITING : 66 *(Tga) -> R(Cga) FT EDITING : 89 P(Ccc) -> S(Tcc) FT EDITING : 105 T(aCt) -> I(aTt) FT EDITING : 107 P(Cca) -> S(Tca) FT EDITING : 110 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 399 NT; CD 1 atgggtaacg atattattgc taatatgatt accgctataa ggaatgctaa CD 51 tctgggaaga gcagaaacag ttgaagtacc agctactaat cCgactagaa CD 101 acattgcaaa aattctttta cgagaaggtt ttatagaaag ttttagcgaa CD 151 caccaagaaa ataaaaattc ttttttgatc tttattctga aatacTgagg CD 201 aaaaaaacga aaaccatata taactacttt gagacgtatt agtaagcctg CD 251 gtttaagaat ttacCccaat tatcaagaaa ttccgagagt tttaggtggt CD 301 acgggaattg ttaCtttaCc aacttctTga ggaattatta cggatcggga CD 351 agctcggcag aagcaagttg gaggagaaat tttgtgttat gtctggtaa FT EDITED CDNA CD 1 atgggtaacg atattattgc taatatgatt accgctataa ggaatgctaa CD 51 tctgggaaga gcagaaacag ttgaagtacc agctactaat cTgactagaa CD 101 acattgcaaa aattctttta cgagaaggtt ttatagaaag ttttagcgaa CD 151 caccaagaaa ataaaaattc ttttttgatc tttattctga aatacCgagg CD 201 aaaaaaacga aaaccatata taactacttt gagacgtatt agtaagcctg CD 251 gtttaagaat ttacTccaat tatcaagaaa ttccgagagt tttaggtggt CD 301 acgggaattg ttaTtttaTc aacttctCga ggaattatta cggatcggga CD 351 agctcggcag aagcaagttg gaggagaaat tttgtgttat gtctggtaa SQ SEQUENCE 133 AA; MGNDIIANMI TAIRNANLGR AETVEVPATN LTRNIAKILL REGFIESFSE HQENKNSFLI FILKYRGKKR KPYITTLRRI SKPGLRIYSN YQEIPRVLGG TGIVILSTSR GIITDREARQ KQVGGEILCY VW* // ID AB086179_65 STANDARD; PRT; 123 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl14 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55386.1 FT PROTEIN_NAME : ribosomal protein L14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 99721 - 100089 FT DIRECTIONS : negative FT EDITING : 48 S(Tct) -> P(Cct) FT EDITING : 104 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 369 NT; CD 1 atgattcaac cccaaactta tttaaatgta gcagacaaca gtggagctcg CD 51 aaaactgatg tgtattcgaa ttctaggagc tagtaatcgt aaatatggca CD 101 atattggtga cataattatt gctgtaacta aggaagcggt aTctaatatg CD 151 cctctaaaaa aatcagaagt agttagagct gtaattgtac gtacttgtaa CD 201 agaagttaga cgtgataatg gaatgaccat aagatttgat gacaatgtag CD 251 ctgctacaac taatcaagag ggaaatccta aaggaactcg agtttttggt CD 301 ccagttgctT gagaatcaag aggatataat tttactaaga taattccact CD 351 agctcctgaa gtgttataa FT EDITED CDNA CD 1 atgattcaac cccaaactta tttaaatgta gcagacaaca gtggagctcg CD 51 aaaactgatg tgtattcgaa ttctaggagc tagtaatcgt aaatatggca CD 101 atattggtga cataattatt gctgtaacta aggaagcggt aCctaatatg CD 151 cctctaaaaa aatcagaagt agttagagct gtaattgtac gtacttgtaa CD 201 agaagttaga cgtgataatg gaatgaccat aagatttgat gacaatgtag CD 251 ctgctacaac taatcaagag ggaaatccta aaggaactcg agtttttggt CD 301 ccagttgctC gagaatcaag aggatataat tttactaaga taattccact CD 351 agctcctgaa gtgttataa SQ SEQUENCE 123 AA; MIQPQTYLNV ADNSGARKLM CIRILGASNR KYGNIGDIII AVTKEAVPNM PLKKSEVVRA VIVRTCKEVR RDNGMTIRFD DNVAATTNQE GNPKGTRVFG PVARESRGYN FTKIIPLAPE VL* // ID AB086179_66 STANDARD; PRT; 137 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl16 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55387.1 FT PROTEIN_NAME : ribosomal protein L16 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 4/0 FT EDITING : 13 H(caT) -> H(caC) FT EDITING : 29 F(tTt) -> S(tCt) FT EDITING : 35 *(Taa) -> Q(Caa) FT EDITING : 104 H(Cat) -> Y(Tat) FT EDITING : 110 L(cTa) -> P(cCa) FT CODON_START : 1 CL CDNALEN 411 NT; CD 1 atgcttagtc ccaaaagagt aaaatttcgt aaacaacaTa gaggaagaat CD 51 gaaaggaata tctactaggg gtaatcagat ttgttTtgga aaatttgctc CD 101 ctTaagcact tgaacctgct tggattacat ctagacaaat agaagcggga CD 151 cgacgggcaa ttagtcgtta tgctcgtcgt ggtggaaaaa tatggatacg CD 201 catatttcct gacaaaccag taactatgcg acctgcagaa acacgtatgg CD 251 gttcgggaaa gggttcccct gaattttggg tatccgttgt taaaccaaat CD 301 aggatacttC atgagatagg tggagtacTa gaagatattg ctaaggcagc CD 351 tataagaata gctgcataca agatgcctat acgtactcaa ttcattattc CD 401 tacatctgta g FT EDITED CDNA CD 1 atgcttagtc ccaaaagagt aaaatttcgt aaacaacaCa gaggaagaat CD 51 gaaaggaata tctactaggg gtaatcagat ttgttCtgga aaatttgctc CD 101 ctCaagcact tgaacctgct tggattacat ctagacaaat agaagcggga CD 151 cgacgggcaa ttagtcgtta tgctcgtcgt ggtggaaaaa tatggatacg CD 201 catatttcct gacaaaccag taactatgcg acctgcagaa acacgtatgg CD 251 gttcgggaaa gggttcccct gaattttggg tatccgttgt taaaccaaat CD 301 aggatacttT atgagatagg tggagtacCa gaagatattg ctaaggcagc CD 351 tataagaata gctgcataca agatgcctat acgtactcaa ttcattattc CD 401 tacatctgta g SQ SEQUENCE 137 AA; MLSPKRVKFR KQHRGRMKGI STRGNQICSG KFAPQALEPA WITSRQIEAG RRAISRYARR GGKIWIRIFP DKPVTMRPAE TRMGSGKGSP EFWVSVVKPN RILYEIGGVP EDIAKAAIRI AAYKMPIRTQ FIILHL* // ID AB086179_67 STANDARD; PRT; 219 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55388.1 FT PROTEIN_NAME : ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 101887 - 102543 FT DIRECTIONS : negative FT EDITING : 151 P(cCt) -> L(cTt) FT EDITING : 186 S(tCa) -> L(tTa) FT EDITING : 190 *(Tga) -> R(Cga) FT EDITING : 201 *(Taa) -> Q(Caa) FT EDITING : 202 I(aTc) -> T(aCc) FT EDITING : 214 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 657 NT; CD 1 atgggacaaa aaattaatcc acttggtttt cgacttgggg ttacgcagaa CD 51 tcactgttcc cattggtttg caaaacctaa taattattac aaacttcttg CD 101 aagaagatga aaaaatgcgt aattgtattt ataattatgt gcgtaagcat CD 151 ataaaaagtt cgtcaaatta tggaggaatt gcacgcattg aaattgaaag CD 201 aaagacagat ttaattcaaa ttgaaatata tacaggattt cctgcccttc CD 251 ttgttgaaag tcgtggtcga ggcattgaag aattaaaagc agatgtacaa CD 301 actgtattga atcttgggaa taggaagctt cgcatggctc taaccgaagt CD 351 ggaagaacca tatacagaac ccaatattct tgcggaatat attgctttac CD 401 aattagaaaa cagagttgct tttagaagaa ctatgaagaa agcgattgaa CD 451 cCtacaagaa agacaagtgt gaaaggtata aagatacaga ttgcaggacg CD 501 tcttaatgga gctgaaatag ctcgtgtcga gtgggctaga gaaggtagag CD 551 ttccatCaca aactattTga gctcaaataa attattgtta ttacccagct CD 601 TaaaTcattt atggagtatt aggaataaag gtatggatat Ctcaaacgga CD 651 agaatga FT EDITED CDNA CD 1 atgggacaaa aaattaatcc acttggtttt cgacttgggg ttacgcagaa CD 51 tcactgttcc cattggtttg caaaacctaa taattattac aaacttcttg CD 101 aagaagatga aaaaatgcgt aattgtattt ataattatgt gcgtaagcat CD 151 ataaaaagtt cgtcaaatta tggaggaatt gcacgcattg aaattgaaag CD 201 aaagacagat ttaattcaaa ttgaaatata tacaggattt cctgcccttc CD 251 ttgttgaaag tcgtggtcga ggcattgaag aattaaaagc agatgtacaa CD 301 actgtattga atcttgggaa taggaagctt cgcatggctc taaccgaagt CD 351 ggaagaacca tatacagaac ccaatattct tgcggaatat attgctttac CD 401 aattagaaaa cagagttgct tttagaagaa ctatgaagaa agcgattgaa CD 451 cTtacaagaa agacaagtgt gaaaggtata aagatacaga ttgcaggacg CD 501 tcttaatgga gctgaaatag ctcgtgtcga gtgggctaga gaaggtagag CD 551 ttccatTaca aactattCga gctcaaataa attattgtta ttacccagct CD 601 CaaaCcattt atggagtatt aggaataaag gtatggatat Ttcaaacgga CD 651 agaatga SQ SEQUENCE 219 AA; MGQKINPLGF RLGVTQNHCS HWFAKPNNYY KLLEEDEKMR NCIYNYVRKH IKSSSNYGGI ARIEIERKTD LIQIEIYTGF PALLVESRGR GIEELKADVQ TVLNLGNRKL RMALTEVEEP YTEPNILAEY IALQLENRVA FRRTMKKAIE LTRKTSVKGI KIQIAGRLNG AEIARVEWAR EGRVPLQTIR AQINYCYYPA QTIYGVLGIK VWIFQTEE* // ID AB086179_68 STANDARD; PRT; 120 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl22 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55389.1 FT PROTEIN_NAME : ribosomal protein L22 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 102592 - 102951 FT DIRECTIONS : negative FT EDITING : 60 F(Ttc) -> L(Ctc) FT CODON_START : 1 CL CDNALEN 360 NT; CD 1 atgaaaacta attactcgaa tttggagacg caagctttag ctaagcatat CD 51 acgtatttcc gcttctaagg taagaagagt tattaatgaa attcgtggtc CD 101 gtttgtatga acaagcacct atgatactag aattcatgct atatagagct CD 151 tgttatcccg tatcacaatt actttctTtc gcagcagcaa atgccagcca CD 201 taatttaggt ttaaataagg ctgattcagt tactagtgaa gtcaaagtag CD 251 atgaaggaac tatgttaaag agatttgaac ctagagctca gggacgtggt CD 301 taccctatac ataaacctac ctctcatata actattgtaa tcaaaaaaaa CD 351 atctacatag FT EDITED CDNA CD 1 atgaaaacta attactcgaa tttggagacg caagctttag ctaagcatat CD 51 acgtatttcc gcttctaagg taagaagagt tattaatgaa attcgtggtc CD 101 gtttgtatga acaagcacct atgatactag aattcatgct atatagagct CD 151 tgttatcccg tatcacaatt actttctCtc gcagcagcaa atgccagcca CD 201 taatttaggt ttaaataagg ctgattcagt tactagtgaa gtcaaagtag CD 251 atgaaggaac tatgttaaag agatttgaac ctagagctca gggacgtggt CD 301 taccctatac ataaacctac ctctcatata actattgtaa tcaaaaaaaa CD 351 atctacatag SQ SEQUENCE 120 AA; MKTNYSNLET QALAKHIRIS ASKVRRVINE IRGRLYEQAP MILEFMLYRA CYPVSQLLSL AAANASHNLG LNKADSVTSE VKVDEGTMLK RFEPRAQGRG YPIHKPTSHI TIVIKKKST* // ID AB086179_69 STANDARD; PRT; 93 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps19 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55390.1 FT PROTEIN_NAME : ribosomal protein S19 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 102970 - 103248 FT DIRECTIONS : negative FT EDITING : 15 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 279 NT; CD 1 atgacacgtt tacttaaaaa aggtcctttt gtggcttatc attCactgga CD 51 gaaaatagag gatcttaata taaagagaga aaaaaaaata atagtaactt CD 101 ggtcccgtgc atcaacaatt gtacctacaa tgattggtca tactattgct CD 151 gtttataatg ggcaggaaca tttacccatt tatataacag atcgtatggt CD 201 aggtcataaa ttaggtgaat ttgcacttac tagagttttt aaaggacatg CD 251 cgaagagtga taaaaaatct cgtcgttaa FT EDITED CDNA CD 1 atgacacgtt tacttaaaaa aggtcctttt gtggcttatc attTactgga CD 51 gaaaatagag gatcttaata taaagagaga aaaaaaaata atagtaactt CD 101 ggtcccgtgc atcaacaatt gtacctacaa tgattggtca tactattgct CD 151 gtttataatg ggcaggaaca tttacccatt tatataacag atcgtatggt CD 201 aggtcataaa ttaggtgaat ttgcacttac tagagttttt aaaggacatg CD 251 cgaagagtga taaaaaatct cgtcgttaa SQ SEQUENCE 93 AA; MTRLLKKGPF VAYHLLEKIE DLNIKREKKI IVTWSRASTI VPTMIGHTIA VYNGQEHLPI YITDRMVGHK LGEFALTRVF KGHAKSDKKS RR* // ID AB086179_70 STANDARD; PRT; 278 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55391.1 FT PROTEIN_NAME : ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 133/0 FT EDITING : 26 *(Tga) -> R(Cga) FT EDITING : 52 *(Tga) -> R(Cga) FT EDITING : 75 S(tCt) -> F(tTt) FT EDITING : 85 S(Tcc) -> P(Ccc) FT EDITING : 87 C(Tgt) -> R(Cgt) FT EDITING : 105 P(cCa) -> L(cTa) FT EDITING : 144 A(gCa) -> V(gTa) FT EDITING : 203 *(Tga) -> R(Cga) FT EDITING : 227 L(cTc) -> P(cCc) FT EDITING : 231 S(Tct) -> P(Cct) FT EDITING : 232 Y(Tat) -> H(Cat) FT CODON_START : 1 CL CDNALEN 834 NT; CD 1 atggtcatcc gttcatacag agcctacacc ctaggaacac gaaatcgatc CD 51 cgtttttgaa ttcgaaaaaa aagttTgatc taaacctcag aaaaaattaa CD 101 cctttagaca acactgtaaa aaaggtcgta ataatagagg cattattaca CD 151 agcTgacata gaggaggcgg acataaacgt atatatcgta aaattgattt CD 201 tcttcgagat aagaaggata tttCtggaag aattgctact atagaatatg CD 251 atTccaacTg taatacattt atatgtctta cctattacga agatggtgaa CD 301 aagaaatata ttcCatatcc tcaaggaatg agaattgggg atagtgtagt CD 351 gtctagtact gaagctccta tttcaatagg aaatgcctta cctttgacca CD 401 atatgccttt aggtacagct atacataatg Cagaaataac acctggaaaa CD 451 ggtggacaat tagcaagagc agctggtgct gtagcaaaaa tcattgcaaa CD 501 agaaggtcga ttggctacat taagattacc ttctggagag gttcggctaa CD 551 tatctcaaaa atgtttagca actattggac aagtaggtaa ttctgatgct CD 601 aataatTgaa ccataggaaa agctggatct aaacgttggc tgggtaaacg CD 651 acccaaagta agaggagtag ttatgaaccT catagatcat TctTatggag CD 701 gtggtgaagg acgagctccg attggtagaa aaaaaccatt aaccccttgg CD 751 ggccatcctg cacttggaag aaaaactcga agaaataaaa aatacagtga CD 801 tattttaatc gttcgtcgcc gtaagaataa ttag FT EDITED CDNA CD 1 atggtcatcc gttcatacag agcctacacc ctaggaacac gaaatcgatc CD 51 cgtttttgaa ttcgaaaaaa aagttCgatc taaacctcag aaaaaattaa CD 101 cctttagaca acactgtaaa aaaggtcgta ataatagagg cattattaca CD 151 agcCgacata gaggaggcgg acataaacgt atatatcgta aaattgattt CD 201 tcttcgagat aagaaggata tttTtggaag aattgctact atagaatatg CD 251 atCccaacCg taatacattt atatgtctta cctattacga agatggtgaa CD 301 aagaaatata ttcTatatcc tcaaggaatg agaattgggg atagtgtagt CD 351 gtctagtact gaagctccta tttcaatagg aaatgcctta cctttgacca CD 401 atatgccttt aggtacagct atacataatg Tagaaataac acctggaaaa CD 451 ggtggacaat tagcaagagc agctggtgct gtagcaaaaa tcattgcaaa CD 501 agaaggtcga ttggctacat taagattacc ttctggagag gttcggctaa CD 551 tatctcaaaa atgtttagca actattggac aagtaggtaa ttctgatgct CD 601 aataatCgaa ccataggaaa agctggatct aaacgttggc tgggtaaacg CD 651 acccaaagta agaggagtag ttatgaaccC catagatcat CctCatggag CD 701 gtggtgaagg acgagctccg attggtagaa aaaaaccatt aaccccttgg CD 751 ggccatcctg cacttggaag aaaaactcga agaaataaaa aatacagtga CD 801 tattttaatc gttcgtcgcc gtaagaataa ttag SQ SEQUENCE 278 AA; MVIRSYRAYT LGTRNRSVFE FEKKVRSKPQ KKLTFRQHCK KGRNNRGIIT SRHRGGGHKR IYRKIDFLRD KKDIFGRIAT IEYDPNRNTF ICLTYYEDGE KKYILYPQGM RIGDSVVSST EAPISIGNAL PLTNMPLGTA IHNVEITPGK GGQLARAAGA VAKIIAKEGR LATLRLPSGE VRLISQKCLA TIGQVGNSDA NNRTIGKAGS KRWLGKRPKV RGVVMNPIDH PHGGGEGRAP IGRKKPLTPW GHPALGRKTR RNKKYSDILI VRRRKNN* // ID AB086179_71 STANDARD; PRT; 92 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl23 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55392.1 FT PROTEIN_NAME : ribosomal protein L23 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 104799 - 105074 FT DIRECTIONS : negative FT EDITING : 21 *(Taa) -> Q(Caa) FT EDITING : 43 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 276 NT; CD 1 atggataaag tgaaataccc agttcttaca gaaaaaacta ttcgtctact CD 51 agaaagaaat Taatactgtt tcgatgttga tttaaaggct agcaaaaccg CD 101 aaataaaaca atggatacaa gatttttCta aggtaaaggt ggtagccatg CD 151 aatagtcatc gacctccaaa aaagaagaaa cggataggtc ctgtactggg CD 201 atatccggta cgttataaac gaatgattat cacacttgaa tcaaattatt CD 251 ccattccact attcttaaac aaataa FT EDITED CDNA CD 1 atggataaag tgaaataccc agttcttaca gaaaaaacta ttcgtctact CD 51 agaaagaaat Caatactgtt tcgatgttga tttaaaggct agcaaaaccg CD 101 aaataaaaca atggatacaa gatttttTta aggtaaaggt ggtagccatg CD 151 aatagtcatc gacctccaaa aaagaagaaa cggataggtc ctgtactggg CD 201 atatccggta cgttataaac gaatgattat cacacttgaa tcaaattatt CD 251 ccattccact attcttaaac aaataa SQ SEQUENCE 92 AA; MDKVKYPVLT EKTIRLLERN QYCFDVDLKA SKTEIKQWIQ DFFKVKVVAM NSHRPPKKKK RIGPVLGYPV RYKRMIITLE SNYSIPLFLN K* // ID AB086179_72 STANDARD; PRT; 501 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55393.1 FT PROTEIN_NAME : NADH dehydrogenase ND2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 242/0 FT EDITING : 89 P(Ccg) -> S(Tcg) FT EDITING : 120 T(aCa) -> I(aTa) FT EDITING : 145 F(tTc) -> S(tCc) FT EDITING : 157 *(Tga) -> R(Cga) FT EDITING : 158 F(tTc) -> S(tCc) FT EDITING : 167 P(cCt) -> L(cTt) FT EDITING : 174 P(Ccc) -> S(Tcc) FT EDITING : 180 S(tCt) -> F(tTt) FT EDITING : 197 L(Ctt) -> F(Ttt) FT EDITING : 294 S(tCt) -> F(tTt) FT EDITING : 310 L(tTg) -> S(tCg) FT EDITING : 335 H(Cac) -> Y(Tac) FT EDITING : 341 L(Ctt) -> F(Ttt) FT EDITING : 368 S(tCa) -> L(tTa) FT EDITING : 373 L(cTt) -> P(cCt) FT EDITING : 379 P(cCt) -> L(cTt) FT EDITING : 399 P(cCt) -> L(cTt) FT EDITING : 402 S(tCt) -> F(tTt) FT EDITING : 454 L(tTg) -> S(tCg) FT EDITING : 476 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 atgaaattag attttggttc atttttatca gatggaagta gtattttacc CD 51 agaatgtatt ttaatttcta gtttaattat cattctattg atagatctaa CD 101 cctctgaaaa aaagacatat tggttatatt tcatttcatt aacaagtttg CD 151 atcataagta taactgtcct gttatttcaa ttaaaggaag aacctatttt CD 201 tagtttctca ggcagttttc aaacagacgg ttttaatgga atattccgaa CD 251 tctctattgc atttCcgtca cttctatgta ttcccttatc tatggaatat CD 301 atgaaatgta caaaaatggc gattactgaa tctttaattt ttttgttaac CD 351 agctactaCa ggaggaatgt ttttatgcgg tgctaatgat ttaataataa CD 401 tatttattac tctagaatgt ttaagtttat cctTctattt attatccgga CD 451 tatactaaga aagatgtaTg atTcaatgaa gctgctatga agtatttacC CD 501 tatgggtgga gcaagttctC ccattctggc ttatggttCt tcatggttat CD 551 acggtttatc tggggggaaa atccaacttc aagagattCt taatggtctt CD 601 ataaacacac aaatgtataa ctctacaagt atttcgatcg tgcttatatt CD 651 tattattgca ggaatcgcat tcaaactttc tttagtacct tttcatcaat CD 701 ggactcctga tgtatatgaa ggagccccta cctcagtcat tgctttcttt CD 751 tctgttactt caaaaatagc cggtttagct ttagctacta gaatcttcaa CD 801 cacagttttt ttttcatcac tgaacgagtg gcatctaatt ctagaaataa CD 851 tagctattct aagtatgatc ttaggtaatt Ctattgctat aacgcaaaca CD 901 agtatgaaac gtatgcttgc atattcttTg ataagtcaaa ttggatattt CD 951 tatgattgga gtaattgcgg gagactctaa tgggtatgca agcatgataa CD 1001 ctCacatgct attctacatt Cttatgaatc taggaacttt tgcttgtatt CD 1051 acattattcg gtttacgcac tggaacggac aacattcggg attatgcagg CD 1101 gtCatataaa aaagatcTtc tattggcatc ttttcCtgct ttatctttat CD 1151 tatccttagg aggtattcct cccttagctg ggtttttcgg aaaacCttac CD 1201 ctctCttggt gtgggtggaa agcgggtcta tacttatcag tctccgtagg CD 1251 acttttcaca agtgtaatct ctatatatta ctatttacga atagtcaaat CD 1301 tgattgtgac taaggaaaac gaagaaacaa cttcttatat tcggaagtat CD 1351 aaaacttctt Tgaattattt agtatcaaaa agtcctattg aatttagtat CD 1401 cattatatgt gtaataggat caacctCttc gggaatagtg attaaccccg CD 1451 tcattgctat tgttgaaaaa acaatatctc taagtagttt tattaataac CD 1501 taa FT EDITED CDNA CD 1 atgaaattag attttggttc atttttatca gatggaagta gtattttacc CD 51 agaatgtatt ttaatttcta gtttaattat cattctattg atagatctaa CD 101 cctctgaaaa aaagacatat tggttatatt tcatttcatt aacaagtttg CD 151 atcataagta taactgtcct gttatttcaa ttaaaggaag aacctatttt CD 201 tagtttctca ggcagttttc aaacagacgg ttttaatgga atattccgaa CD 251 tctctattgc atttTcgtca cttctatgta ttcccttatc tatggaatat CD 301 atgaaatgta caaaaatggc gattactgaa tctttaattt ttttgttaac CD 351 agctactaTa ggaggaatgt ttttatgcgg tgctaatgat ttaataataa CD 401 tatttattac tctagaatgt ttaagtttat cctCctattt attatccgga CD 451 tatactaaga aagatgtaCg atCcaatgaa gctgctatga agtatttacT CD 501 tatgggtgga gcaagttctT ccattctggc ttatggttTt tcatggttat CD 551 acggtttatc tggggggaaa atccaacttc aagagattTt taatggtctt CD 601 ataaacacac aaatgtataa ctctacaagt atttcgatcg tgcttatatt CD 651 tattattgca ggaatcgcat tcaaactttc tttagtacct tttcatcaat CD 701 ggactcctga tgtatatgaa ggagccccta cctcagtcat tgctttcttt CD 751 tctgttactt caaaaatagc cggtttagct ttagctacta gaatcttcaa CD 801 cacagttttt ttttcatcac tgaacgagtg gcatctaatt ctagaaataa CD 851 tagctattct aagtatgatc ttaggtaatt Ttattgctat aacgcaaaca CD 901 agtatgaaac gtatgcttgc atattcttCg ataagtcaaa ttggatattt CD 951 tatgattgga gtaattgcgg gagactctaa tgggtatgca agcatgataa CD 1001 ctTacatgct attctacatt Tttatgaatc taggaacttt tgcttgtatt CD 1051 acattattcg gtttacgcac tggaacggac aacattcggg attatgcagg CD 1101 gtTatataaa aaagatcCtc tattggcatc ttttcTtgct ttatctttat CD 1151 tatccttagg aggtattcct cccttagctg ggtttttcgg aaaacTttac CD 1201 ctctTttggt gtgggtggaa agcgggtcta tacttatcag tctccgtagg CD 1251 acttttcaca agtgtaatct ctatatatta ctatttacga atagtcaaat CD 1301 tgattgtgac taaggaaaac gaagaaacaa cttcttatat tcggaagtat CD 1351 aaaacttctt Cgaattattt agtatcaaaa agtcctattg aatttagtat CD 1401 cattatatgt gtaataggat caacctTttc gggaatagtg attaaccccg CD 1451 tcattgctat tgttgaaaaa acaatatctc taagtagttt tattaataac CD 1501 taa SQ SEQUENCE 501 AA; MKLDFGSFLS DGSSILPECI LISSLIIILL IDLTSEKKTY WLYFISLTSL IISITVLLFQ LKEEPIFSFS GSFQTDGFNG IFRISIAFSS LLCIPLSMEY MKCTKMAITE SLIFLLTATI GGMFLCGAND LIIIFITLEC LSLSSYLLSG YTKKDVRSNE AAMKYLLMGG ASSSILAYGF SWLYGLSGGK IQLQEIFNGL INTQMYNSTS ISIVLIFIIA GIAFKLSLVP FHQWTPDVYE GAPTSVIAFF SVTSKIAGLA LATRIFNTVF FSSLNEWHLI LEIIAILSMI LGNFIAITQT SMKRMLAYSS ISQIGYFMIG VIAGDSNGYA SMITYMLFYI FMNLGTFACI TLFGLRTGTD NIRDYAGLYK KDPLLASFLA LSLLSLGGIP PLAGFFGKLY LFWCGWKAGL YLSVSVGLFT SVISIYYYLR IVKLIVTKEN EETTSYIRKY KTSSNYLVSK SPIEFSIIIC VIGSTFSGIV INPVIAIVEK TISLSSFINN * // ID AB086179_73 STANDARD; PRT; 156 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps7 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55394.1 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 110206 - 110673 FT DIRECTIONS : negative FT EDITING : 21 *(Tga) -> R(Cga) FT EDITING : 71 S(Tct) -> P(Cct) FT EDITING : 86 *(Taa) -> Q(Caa) FT EDITING : 108 F(tTt) -> S(tCt) FT EDITING : 124 S(tCa) -> L(tTa) FT EDITING : 127 V(gTt) -> A(gCt) FT CODON_START : 1 CL CDNALEN 468 NT; CD 1 atgtcgcgcc gaggtactac agagaaacaa atcgaaaaac ctgatccaat CD 51 ttatcgtaac Tgattggtta acttgttggt taatcgtatc ttgaggaatg CD 101 gaaaaaaatc attggcttat cgaattcttt atggagccat gagaaatatt CD 151 agacgagcaa cgaagaaaaa tccattatcc gtattacgtc aagcagtacg CD 201 tagagtaact Tctaatgtta cggtaaaagc acgacgtgta ggtggttcga CD 251 cctatTaagt ccccattgaa atagaatctt cacaaggaaa agcgcttgct CD 301 attcgttggt tattagtggc atTtaaaaaa cgtccaggtc gaaatatggc CD 351 ttttaaattg agttacgaat CaatagatgT tgctagggat aatggaaatg CD 401 ctgtgcgtaa aagagaggaa actcatagaa tggcagaggc taatagagct CD 451 ttcgctcatt ttcgctaa FT EDITED CDNA CD 1 atgtcgcgcc gaggtactac agagaaacaa atcgaaaaac ctgatccaat CD 51 ttatcgtaac Cgattggtta acttgttggt taatcgtatc ttgaggaatg CD 101 gaaaaaaatc attggcttat cgaattcttt atggagccat gagaaatatt CD 151 agacgagcaa cgaagaaaaa tccattatcc gtattacgtc aagcagtacg CD 201 tagagtaact Cctaatgtta cggtaaaagc acgacgtgta ggtggttcga CD 251 cctatCaagt ccccattgaa atagaatctt cacaaggaaa agcgcttgct CD 301 attcgttggt tattagtggc atCtaaaaaa cgtccaggtc gaaatatggc CD 351 ttttaaattg agttacgaat TaatagatgC tgctagggat aatggaaatg CD 401 ctgtgcgtaa aagagaggaa actcatagaa tggcagaggc taatagagct CD 451 ttcgctcatt ttcgctaa SQ SEQUENCE 156 AA; MSRRGTTEKQ IEKPDPIYRN RLVNLLVNRI LRNGKKSLAY RILYGAMRNI RRATKKNPLS VLRQAVRRVT PNVTVKARRV GGSTYQVPIE IESSQGKALA IRWLLVASKK RPGRNMAFKL SYELIDAARD NGNAVRKREE THRMAEANRA FAHFR* // ID AB086179_74 STANDARD; PRT; 733 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhF FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55396.1 FT PROTEIN_NAME : NADH dehydrogenase ND5 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 123299 - 125497 FT DIRECTIONS : negative FT EDITING : 27 P(cCt) -> L(cTt) FT EDITING : 46 S(tCa) -> L(tTa) FT EDITING : 70 *(Taa) -> Q(Caa) FT EDITING : 75 R(Cgg) -> W(Tgg) FT EDITING : 83 S(tCg) -> L(tTg) FT EDITING : 91 L(cTa) -> P(cCa) FT EDITING : 125 L(Ctt) -> F(Ttt) FT EDITING : 128 P(cCt) -> L(cTt) FT EDITING : 183 C(Tgc) -> R(Cgc) FT EDITING : 194 S(tCa) -> L(tTa) FT EDITING : 209 S(tCt) -> F(tTt) FT EDITING : 223 L(cTt) -> P(cCt) FT EDITING : 259 F(TTT) -> P(CCC) FT EDITING : 282 L(cTc) -> P(cCc) FT EDITING : 291 T(aCg) -> M(aTg) FT EDITING : 303 S(tCa) -> L(tTa) FT EDITING : 311 S(tCt) -> F(tTt) FT EDITING : 322 L(CTg) -> S(TCg) FT EDITING : 334 P(cCa) -> L(cTa) FT EDITING : 344 S(tCt) -> F(tTt) FT EDITING : 346 F(Ttt) -> L(Ctt) FT EDITING : 355 S(tCa) -> L(tTa) FT EDITING : 366 P(Cct) -> S(Tct) FT EDITING : 374 C(Tgt) -> R(Cgt) FT EDITING : 379 *(Taa) -> Q(Caa) FT EDITING : 399 P(CCg) -> L(TTg) FT EDITING : 403 P(cCt) -> L(cTt) FT EDITING : 410 L(cTt) -> P(cCt) FT EDITING : 427 H(Cac) -> Y(Tac) FT EDITING : 445 H(Cac) -> Y(Tac) FT EDITING : 463 S(tCt) -> F(tTt) FT EDITING : 492 S(tCa) -> L(tTa) FT EDITING : 550 S(tCa) -> L(tTa) FT EDITING : 634 L(cTt) -> P(cCt) FT CODON_START : 1 CL CDNALEN 2199 NT; CD 1 atgcaactta tatatcaatg tgcttggatt gtccctctgt gtccacttat CD 51 atcttctatt ctaataggat taggattacC tttttttgag aagtctacaa CD 101 aaagtattcg tcgtatatgt gctattagtt gtatctCatc attaagtgta CD 151 gctacagtca tttgctacaa tctctcctac gaacaaatca tagataattc CD 201 gatctatTaa tactcatggt caCggatctc aaatggagat atcgtttCgg CD 251 aattcggtta tttaattgat cTattaactt gtataatgtt ggtactagtt CD 301 actagtgtag ccattatagt tatgatttat agtgatggtt acatgtctca CD 351 cgatgaagga tatgttaggt ttCttgttta tcCtagtctt ttcactgcgt CD 401 ctatgttagg attagtactt agccctaatt taatacaaat ttatattttt CD 451 tgggaattag taggaatgtg ttcttattta ttaataggtt tttggtttac CD 501 tagacccagt gcagctaacg cctgtcaaaa agcttttatt actaatTgca CD 551 taggagattt tggattacta ttaggaattt Caggtttcta ttggataact CD 601 ggtagtttcg aatttgaaaa tttgtCtaaa ggatttaagg atttacttat CD 651 taataatgaa gttagtcTtt tctttgctat cttatgtgct tcctttctat CD 701 ttctaggtcc ggtagcaaaa tctgcacaat ttccactcca cgtatggttg CD 751 cctgatgcta tggaaggacc cacaTTTatt tcggctctga tccatgcagc CD 801 tactatggta gcagcaggaa tctatctcgt agctagaatg tttcTccttt CD 851 ttgaaacttt acctttcgtt aCgagtgtaa tttcctggac aggtgcagta CD 901 actgcttCat taggggctac tttagccttc tCtcaaaaag atcttaaaag CD 951 aggtttagct tatCTgacaa tgtctcaact aggttatatg atgttagctc CD 1001 Caggtatagg ttcctataga gctggtttgt CtcacTttat aacacatgct CD 1051 tattctaagg cttCattatt tctcggatca ggatcagtaa ttcatCctat CD 1101 ggaacctatt gttggatatT gtcccgacga aagtTaaaat atgattttta CD 1151 tgggtggatt gaggaagcat atgccaatta caggaacaac ttttCCgtta CD 1201 ggtacacCtt ctttatgtgg tattccacTt ttcgcttgtt tctggtccaa CD 1251 agatgagatt attgcggata gttggttaCa ctcccctttt attggatgga CD 1301 tagccttgct cacagcgggt ttaacttcct ttCacatgtt tcgcatctac CD 1351 tttttaacgt tcgaaggtga gtttagagct aattcttCta aagaaaatac CD 1401 tcctgtttct tctgtttctt tatggggaga attcagattt gaggaatttg CD 1451 gtgaaaaaaa agcagattct gtttCacaaa ttgtcgaaaa aagttctcca CD 1501 aaagagtttt ttcgattcgt acaaagtaat cgagaatcaa gtgaaacaca CD 1551 aataggaaat tatctatctg cttacccatc aaaagaacca atccattttt CD 1601 tatatcccaa agaatcagat tatactatgc taattccttt acttatatCa CD 1651 tcaataccca ctttacttat cggttttata ggagctcctc ttcctaatgg CD 1701 acaattaggt tccgatctat tatctcattg gttgaattca tttggaaatt CD 1751 tatctccgga aagattatct gaaaattggt tggaattcat tgaagacgca CD 1801 attacttcaa ttagtatagc ttcttttgga atattctccg ccttcatctt CD 1851 atatggaccg gcctctatct tccctagaga tttagaaaag aaaatagaac CD 1901 Ttcaactaaa aggtgtttgg ggttttttca tcaattatat gtataactgg CD 1951 tctcagtacc gaggttacat agatcaatac tataataaga ttttcgttga CD 2001 aggtacaaga atacttgctt atgcttcatc cttctttgat agatggataa CD 2051 tagatggaat tgttaatggc actggcatct caagcttctc cggaggtgag CD 2101 ggaatgagat acggagaagg aggaagagta tcttcctatt tatttggatt CD 2151 agtttttggt atgactatct tgttagctgt aatactttta ataatataa FT EDITED CDNA CD 1 atgcaactta tatatcaatg tgcttggatt gtccctctgt gtccacttat CD 51 atcttctatt ctaataggat taggattacT tttttttgag aagtctacaa CD 101 aaagtattcg tcgtatatgt gctattagtt gtatctTatc attaagtgta CD 151 gctacagtca tttgctacaa tctctcctac gaacaaatca tagataattc CD 201 gatctatCaa tactcatggt caTggatctc aaatggagat atcgtttTgg CD 251 aattcggtta tttaattgat cCattaactt gtataatgtt ggtactagtt CD 301 actagtgtag ccattatagt tatgatttat agtgatggtt acatgtctca CD 351 cgatgaagga tatgttaggt ttTttgttta tcTtagtctt ttcactgcgt CD 401 ctatgttagg attagtactt agccctaatt taatacaaat ttatattttt CD 451 tgggaattag taggaatgtg ttcttattta ttaataggtt tttggtttac CD 501 tagacccagt gcagctaacg cctgtcaaaa agcttttatt actaatCgca CD 551 taggagattt tggattacta ttaggaattt Taggtttcta ttggataact CD 601 ggtagtttcg aatttgaaaa tttgtTtaaa ggatttaagg atttacttat CD 651 taataatgaa gttagtcCtt tctttgctat cttatgtgct tcctttctat CD 701 ttctaggtcc ggtagcaaaa tctgcacaat ttccactcca cgtatggttg CD 751 cctgatgcta tggaaggacc cacaCCCatt tcggctctga tccatgcagc CD 801 tactatggta gcagcaggaa tctatctcgt agctagaatg tttcCccttt CD 851 ttgaaacttt acctttcgtt aTgagtgtaa tttcctggac aggtgcagta CD 901 actgcttTat taggggctac tttagccttc tTtcaaaaag atcttaaaag CD 951 aggtttagct tatTCgacaa tgtctcaact aggttatatg atgttagctc CD 1001 Taggtatagg ttcctataga gctggtttgt TtcacCttat aacacatgct CD 1051 tattctaagg cttTattatt tctcggatca ggatcagtaa ttcatTctat CD 1101 ggaacctatt gttggatatC gtcccgacga aagtCaaaat atgattttta CD 1151 tgggtggatt gaggaagcat atgccaatta caggaacaac ttttTTgtta CD 1201 ggtacacTtt ctttatgtgg tattccacCt ttcgcttgtt tctggtccaa CD 1251 agatgagatt attgcggata gttggttaTa ctcccctttt attggatgga CD 1301 tagccttgct cacagcgggt ttaacttcct ttTacatgtt tcgcatctac CD 1351 tttttaacgt tcgaaggtga gtttagagct aattcttTta aagaaaatac CD 1401 tcctgtttct tctgtttctt tatggggaga attcagattt gaggaatttg CD 1451 gtgaaaaaaa agcagattct gtttTacaaa ttgtcgaaaa aagttctcca CD 1501 aaagagtttt ttcgattcgt acaaagtaat cgagaatcaa gtgaaacaca CD 1551 aataggaaat tatctatctg cttacccatc aaaagaacca atccattttt CD 1601 tatatcccaa agaatcagat tatactatgc taattccttt acttatatTa CD 1651 tcaataccca ctttacttat cggttttata ggagctcctc ttcctaatgg CD 1701 acaattaggt tccgatctat tatctcattg gttgaattca tttggaaatt CD 1751 tatctccgga aagattatct gaaaattggt tggaattcat tgaagacgca CD 1801 attacttcaa ttagtatagc ttcttttgga atattctccg ccttcatctt CD 1851 atatggaccg gcctctatct tccctagaga tttagaaaag aaaatagaac CD 1901 Ctcaactaaa aggtgtttgg ggttttttca tcaattatat gtataactgg CD 1951 tctcagtacc gaggttacat agatcaatac tataataaga ttttcgttga CD 2001 aggtacaaga atacttgctt atgcttcatc cttctttgat agatggataa CD 2051 tagatggaat tgttaatggc actggcatct caagcttctc cggaggtgag CD 2101 ggaatgagat acggagaagg aggaagagta tcttcctatt tatttggatt CD 2151 agtttttggt atgactatct tgttagctgt aatactttta ataatataa SQ SEQUENCE 733 AA; MQLIYQCAWI VPLCPLISSI LIGLGLLFFE KSTKSIRRIC AISCILSLSV ATVICYNLSY EQIIDNSIYQ YSWSWISNGD IVLEFGYLID PLTCIMLVLV TSVAIIVMIY SDGYMSHDEG YVRFFVYLSL FTASMLGLVL SPNLIQIYIF WELVGMCSYL LIGFWFTRPS AANACQKAFI TNRIGDFGLL LGILGFYWIT GSFEFENLFK GFKDLLINNE VSPFFAILCA SFLFLGPVAK SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGIYLVARM FPLFETLPFV MSVISWTGAV TALLGATLAF FQKDLKRGLA YSTMSQLGYM MLALGIGSYR AGLFHLITHA YSKALLFLGS GSVIHSMEPI VGYRPDESQN MIFMGGLRKH MPITGTTFLL GTLSLCGIPP FACFWSKDEI IADSWLYSPF IGWIALLTAG LTSFYMFRIY FLTFEGEFRA NSFKENTPVS SVSLWGEFRF EEFGEKKADS VLQIVEKSSP KEFFRFVQSN RESSETQIGN YLSAYPSKEP IHFLYPKESD YTMLIPLLIL SIPTLLIGFI GAPLPNGQLG SDLLSHWLNS FGNLSPERLS ENWLEFIEDA ITSISIASFG IFSAFILYGP ASIFPRDLEK KIEPQLKGVW GFFINYMYNW SQYRGYIDQY YNKIFVEGTR ILAYASSFFD RWIIDGIVNG TGISSFSGGE GMRYGEGGRV SSYLFGLVFG MTILLAVILL II* // ID AB086179_75 STANDARD; PRT; 119 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl21 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55397.1 FT PROTEIN_NAME : ribosomal protein L21 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 125882 - 126238 FT DIRECTIONS : positive FT EDITING : 15 *(Tga) -> R(Cga) FT EDITING : 53 L(tTg) -> S(tCg) FT EDITING : 60 L(CTc) -> S(TCc) FT EDITING : 61 R(Cgg) -> W(Tgg) FT EDITING : 92 *(Tga) -> R(Cga) FT EDITING : 103 *(Tga) -> R(Cga) FT EDITING : 104 S(tCt) -> F(tTt) FT EDITING : 108 P(Ccc) -> S(Tcc) FT EDITING : 109 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 atgaatacat atgcaataat tgataccgga ggtgagcaac tcTgagttga CD 51 accaggaaga ttttatgata tgcgtcactt tactttacta aatccgagta CD 101 ttttagattc aaatactaaa gtattaatct atcgagtatt aatgattcat CD 151 catgaatTga atatcgctct tggagatCTc Cggttagaag atgcaacaat CD 201 taaaggaaga gttttacatt ctcactttaa agacaaaatt acaatttaca CD 251 aaatgcgttc taagaaaaag atgTgacgta aattaggata tcgattaaat CD 301 ttagccTgat Ctgtggtgga tCccaCttgt ttcgatggaa aagaattcta CD 351 caaataa FT EDITED CDNA CD 1 atgaatacat atgcaataat tgataccgga ggtgagcaac tcCgagttga CD 51 accaggaaga ttttatgata tgcgtcactt tactttacta aatccgagta CD 101 ttttagattc aaatactaaa gtattaatct atcgagtatt aatgattcat CD 151 catgaatCga atatcgctct tggagatTCc Tggttagaag atgcaacaat CD 201 taaaggaaga gttttacatt ctcactttaa agacaaaatt acaatttaca CD 251 aaatgcgttc taagaaaaag atgCgacgta aattaggata tcgattaaat CD 301 ttagccCgat Ttgtggtgga tTccaTttgt ttcgatggaa aagaattcta CD 351 caaataa SQ SEQUENCE 119 AA; MNTYAIIDTG GEQLRVEPGR FYDMRHFTLL NPSILDSNTK VLIYRVLMIH HESNIALGDS WLEDATIKGR VLHSHFKDKI TIYKMRSKKK MRRKLGYRLN LARFVVDSIC FDGKEFYK* // ID AB086179_76 STANDARD; PRT; 70 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl32 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55398.1 FT PROTEIN_NAME : ribosomal protein L32 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 126400 - 126609 FT DIRECTIONS : positive FT EDITING : 34 L(Cta) -> L(Tta) FT EDITING : 57 F(tTc) -> S(tCc) FT CODON_START : 1 CL CDNALEN 210 NT; CD 1 atggcagttc cgaagaagcg tacttctaaa tcaaaaagaa agattcgtaa CD 51 aactgtgtgg agagaaaagg ctaataaggc cgcaaaaaaa gctttctccC CD 101 tagcacgttt aattttaagt ggtcgttcaa agagtttttg ttacacagta CD 151 aataataagt cttccgaatT ctctgaatct acatctattg atgaatcaga CD 201 tgattcatga FT EDITED CDNA CD 1 atggcagttc cgaagaagcg tacttctaaa tcaaaaagaa agattcgtaa CD 51 aactgtgtgg agagaaaagg ctaataaggc cgcaaaaaaa gctttctccT CD 101 tagcacgttt aattttaagt ggtcgttcaa agagtttttg ttacacagta CD 151 aataataagt cttccgaatC ctctgaatct acatctattg atgaatcaga CD 201 tgattcatga SQ SEQUENCE 70 AA; MAVPKKRTSK SKRKIRKTVW REKANKAAKK AFSLARLILS GRSKSFCYTV NNKSSESSES TSIDESDDS* // ID AB086179_77 STANDARD; PRT; 289 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ORF288 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55399.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 126778 - 127644 FT DIRECTIONS : positive FT EDITING : 9 P(cCa) -> L(cTa) FT EDITING : 21 *(Tga) -> R(Cga) FT EDITING : 48 S(tCa) -> L(tTa) FT EDITING : 71 P(Cca) -> S(Tca) FT EDITING : 82 S(tCa) -> L(tTa) FT EDITING : 86 T(aCa) -> I(aTa) FT EDITING : 103 S(tCt) -> F(tTt) FT EDITING : 116 L(cTt) -> P(cCt) FT EDITING : 128 S(tCa) -> L(tTa) FT EDITING : 176 S(tCg) -> L(tTg) FT EDITING : 230 S(tCa) -> L(tTa) FT EDITING : 245 P(cCc) -> L(cTc) FT EDITING : 274 P(cCt) -> L(cTt) FT EDITING : 280 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 867 NT; CD 1 atgagccaac ttatttttat tcctcCatta atttcacttt tagtaactaa CD 51 gggaaagatt Tgatttttga ataattttga atcagtctta gctttaagtt CD 101 tacactacgg tattctcgta ttagctttgc ctatatttat ttCattatac CD 151 aaagctaaga aacaaccttg cagtatcttg ttaaaagtaa ctacagaacc CD 201 aataatatta Ccagcttatg ctactacgtt ttccactgct ttttCagcaa CD 251 ttactaCaaa cgctttattt ggactaatca ttgcttggat tttggttaaa CD 301 tatgaatCta ctggaaaaga aactttagat gctatagttg accttcTttt CD 351 tgctcttccc gcttcagtag gaggcctcac ttCaatgact gtatatagtg CD 401 atagaggctg gatgggtcca atttgttctg gattaggttt aaaaatagtt CD 451 tttagtcgtc taggagttcc tatggctacg atcttcgtat cattaccttt CD 501 tgtagtacgt accatacaac cagtttCgca agatgtagaa gaagaattag CD 551 aagaagctgc ttggtgtata ggtgcatcac cttggacgac tttttgtcaa CD 601 atctcactcc cacttctaac tccttcatta ttaacaggaa cagctttagg CD 651 tttctcaaga gctatagggg aatatggttc aatagtttCa atagcatgta CD 701 atattcctat gaaagattta gtaatttccg tacCcatttt tcaaaaactt CD 751 gaacaatatg attatcaagg tgctattgtt gtagcaacca tagtattaat CD 801 agcttctttc ggtggattac Ctataattaa taaagttTaa ttatggaaac CD 851 aaaatttgag taaatga FT EDITED CDNA CD 1 atgagccaac ttatttttat tcctcTatta atttcacttt tagtaactaa CD 51 gggaaagatt Cgatttttga ataattttga atcagtctta gctttaagtt CD 101 tacactacgg tattctcgta ttagctttgc ctatatttat ttTattatac CD 151 aaagctaaga aacaaccttg cagtatcttg ttaaaagtaa ctacagaacc CD 201 aataatatta Tcagcttatg ctactacgtt ttccactgct ttttTagcaa CD 251 ttactaTaaa cgctttattt ggactaatca ttgcttggat tttggttaaa CD 301 tatgaatTta ctggaaaaga aactttagat gctatagttg accttcCttt CD 351 tgctcttccc gcttcagtag gaggcctcac ttTaatgact gtatatagtg CD 401 atagaggctg gatgggtcca atttgttctg gattaggttt aaaaatagtt CD 451 tttagtcgtc taggagttcc tatggctacg atcttcgtat cattaccttt CD 501 tgtagtacgt accatacaac cagtttTgca agatgtagaa gaagaattag CD 551 aagaagctgc ttggtgtata ggtgcatcac cttggacgac tttttgtcaa CD 601 atctcactcc cacttctaac tccttcatta ttaacaggaa cagctttagg CD 651 tttctcaaga gctatagggg aatatggttc aatagtttTa atagcatgta CD 701 atattcctat gaaagattta gtaatttccg tacTcatttt tcaaaaactt CD 751 gaacaatatg attatcaagg tgctattgtt gtagcaacca tagtattaat CD 801 agcttctttc ggtggattac Ttataattaa taaagttCaa ttatggaaac CD 851 aaaatttgag taaatga SQ SEQUENCE 289 AA; MSQLIFIPLL ISLLVTKGKI RFLNNFESVL ALSLHYGILV LALPIFILLY KAKKQPCSIL LKVTTEPIIL SAYATTFSTA FLAITINALF GLIIAWILVK YEFTGKETLD AIVDLPFALP ASVGGLTLMT VYSDRGWMGP ICSGLGLKIV FSRLGVPMAT IFVSLPFVVR TIQPVLQDVE EELEEAAWCI GASPWTTFCQ ISLPLLTPSL LTGTALGFSR AIGEYGSIVL IACNIPMKDL VISVLIFQKL EQYDYQGAIV VATIVLIASF GGLLIINKVQ LWKQNLSK* // ID AB086179_78 STANDARD; PRT; 340 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ccsA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55400.1 FT PROTEIN_NAME : putative cytochrome-c synthesis associated FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 128424 - 129443 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 14 P(Cct) -> S(Tct) FT EDITING : 60 R(Cgg) -> W(Tgg) FT EDITING : 63 P(Cct) -> S(Tct) FT EDITING : 131 S(tCa) -> L(tTa) FT EDITING : 161 S(tCa) -> L(tTa) FT EDITING : 238 *(Taa) -> Q(Caa) FT EDITING : 239 *(Tag) -> Q(Cag) FT EDITING : 253 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 1020 NT; CD 1 aCgatattaa taaatctaga acatatatta gctcatattC ctttctttct CD 51 tccttttctc gcaactttgg ttttttgggg aagaattgtt tgtatagaca CD 101 ataaaagaat aggttcttta ggtaataaaa gcataataat cgcttatatt CD 151 tgtataacgg ggcttctact gactcgcCgg ttccatCcta gacacttact CD 201 gctaagtaat ctatatgaat cttttatgtt tctttcatgg agtttttgtt CD 251 tgattcacat agtttcagaa atcggaagta aaaatgattg gttaggtatc CD 301 atcattgtac tgattgctat gttaacccat ggttttgcta ctgtgggtct CD 351 ccccatagag atgcaacaat ctacagtttt agtacctgcc tCacaatctc CD 401 attggttaat aatgcacgta agtatgatga tacctagtta tgccactctt CD 451 ccatgtggat ctttattagt aatagctttg tCaattacta cgttaaataa CD 501 aaataaaaat tttcctatat taaaatttaa cgtaaattca tttatttggt CD 551 ctctaatttt ggaaaagaaa ttttatttag gaggaagtgg tggagatata CD 601 agtagtagga atagcagtag tggtaatggg agtgataatg atagtaataa CD 651 taataataat aaaaagactt ttcattcgct atctatagat tgtcgtaaat CD 701 tgcaattaac tTaaTagttg gattattgga gttatcgaat tattagttta CD 751 ggttcttCgt ttttaactat aggtattctc tctggagcag tatgggttaa CD 801 tgaagcttgg ggatcttact ggagttggga tcctaaggaa acttgggctt CD 851 taattacttg gcttctatct gcaattcata tacatatcag aatgattagg CD 901 ggttggcagg gtgaaaaacc agcaattata gcgtcttcag gatcttctat CD 951 agtttggttt cgctacttag gagtcaactc ccctgaaaaa ggtttgcata CD 1001 gttatggctg gttaaattga FT EDITED CDNA CD 1 aTgatattaa taaatctaga acatatatta gctcatattT ctttctttct CD 51 tccttttctc gcaactttgg ttttttgggg aagaattgtt tgtatagaca CD 101 ataaaagaat aggttcttta ggtaataaaa gcataataat cgcttatatt CD 151 tgtataacgg ggcttctact gactcgcTgg ttccatTcta gacacttact CD 201 gctaagtaat ctatatgaat cttttatgtt tctttcatgg agtttttgtt CD 251 tgattcacat agtttcagaa atcggaagta aaaatgattg gttaggtatc CD 301 atcattgtac tgattgctat gttaacccat ggttttgcta ctgtgggtct CD 351 ccccatagag atgcaacaat ctacagtttt agtacctgcc tTacaatctc CD 401 attggttaat aatgcacgta agtatgatga tacctagtta tgccactctt CD 451 ccatgtggat ctttattagt aatagctttg tTaattacta cgttaaataa CD 501 aaataaaaat tttcctatat taaaatttaa cgtaaattca tttatttggt CD 551 ctctaatttt ggaaaagaaa ttttatttag gaggaagtgg tggagatata CD 601 agtagtagga atagcagtag tggtaatggg agtgataatg atagtaataa CD 651 taataataat aaaaagactt ttcattcgct atctatagat tgtcgtaaat CD 701 tgcaattaac tCaaCagttg gattattgga gttatcgaat tattagttta CD 751 ggttcttTgt ttttaactat aggtattctc tctggagcag tatgggttaa CD 801 tgaagcttgg ggatcttact ggagttggga tcctaaggaa acttgggctt CD 851 taattacttg gcttctatct gcaattcata tacatatcag aatgattagg CD 901 ggttggcagg gtgaaaaacc agcaattata gcgtcttcag gatcttctat CD 951 agtttggttt cgctacttag gagtcaactc ccctgaaaaa ggtttgcata CD 1001 gttatggctg gttaaattga SQ SEQUENCE 340 AA; MILINLEHIL AHISFFLPFL ATLVFWGRIV CIDNKRIGSL GNKSIIIAYI CITGLLLTRW FHSRHLLLSN LYESFMFLSW SFCLIHIVSE IGSKNDWLGI IIVLIAMLTH GFATVGLPIE MQQSTVLVPA LQSHWLIMHV SMMIPSYATL PCGSLLVIAL LITTLNKNKN FPILKFNVNS FIWSLILEKK FYLGGSGGDI SSRNSSSGNG SDNDSNNNNN KKTFHSLSID CRKLQLTQQL DYWSYRIISL GSLFLTIGIL SGAVWVNEAW GSYWSWDPKE TWALITWLLS AIHIHIRMIR GWQGEKPAII ASSGSSIVWF RYLGVNSPEK GLHSYGWLN* // ID AB086179_79 STANDARD; PRT; 502 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55401.2 FT PROTEIN_NAME : NADH dehydrogenase ND4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 129713 - 131218 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 12 P(cCt) -> L(cTt) FT EDITING : 20 S(tCa) -> L(tTa) FT EDITING : 33 *(Tga) -> R(Cga) FT EDITING : 46 P(cCa) -> L(cTa) FT EDITING : 49 H(Cat) -> Y(Tat) FT EDITING : 73 F(Ttc) -> L(Ctc) FT EDITING : 99 S(tCa) -> L(tTa) FT EDITING : 102 S(TCa) -> L(CTa) FT EDITING : 114 S(tCc) -> F(tTc) FT EDITING : 129 S(tCt) -> F(tTt) FT EDITING : 135 S(tCa) -> L(tTa) FT EDITING : 137 S(tCt) -> F(tTt) FT EDITING : 178 P(cCa) -> L(cTa) FT EDITING : 179 S(tCa) -> L(tTa) FT EDITING : 206 L(cTt) -> P(cCt) FT EDITING : 242 Y(Tat) -> H(Cat) FT EDITING : 261 S(tCa) -> L(tTa) FT EDITING : 273 Y(Tat) -> H(Cat) FT EDITING : 293 S(tCa) -> L(tTa) FT EDITING : 295 F(tTc) -> S(tCc) FT EDITING : 308 L(tTa) -> S(tCa) FT EDITING : 309 L(tTg) -> S(tCg) FT EDITING : 322 P(Cct) -> S(Tct) FT EDITING : 333 S(tCa) -> L(tTa) FT EDITING : 334 *(Taa) -> Q(Caa) FT EDITING : 345 P(cCc) -> L(cTc) FT EDITING : 348 P(Cca) -> S(Tca) FT EDITING : 375 S(tCt) -> F(tTt) FT EDITING : 402 S(tCa) -> L(tTa) FT EDITING : 439 *(Taa) -> Q(Caa) FT EDITING : 479 L(cTc) -> P(cCc) FT EDITING : 483 P(cCa) -> L(cTa) FT EDITING : 492 F(tTt) -> S(tCt) FT CODON_START : 1 CL CDNALEN 1506 NT; CD 1 aCgagcaact ttccctggct aactataatc gttcCtctac ctatatctgc CD 51 aggcttatCa atacctctac ttcctaataa aggtaataga attattTgat CD 101 ggtatacatt aggtatctgt ttggtagaat ttcttcCaat aactCatatt CD 151 ttttgcaact atttccactt cgacaatcaa tttattgaat taaaagaaga CD 201 ttataactgg ataaatTtcc tagattttca ttggagatta gggattgatg CD 251 gactgtccat tgggcttatt ttattaacag gatttataac tacttCagcc CD 301 accTCagcag cttggccaat tactcggaat cccagattat Cctatttttt CD 351 gatgttagcg atgtatagtg gtcaagtagg attatCtgct agtcaagaca CD 401 tttCactttC ttttttcatg tgggaactag aattaattcc agtttattta CD 451 cttctatcta tgtggggggg aaagagacgt ctatatgcag ctacgaagtt CD 501 cattttgtat accgcaggta gttctgtctt tcCatCaatg ggagctttaa CD 551 ctatgggact ttacggatct gacggtccta ccttagactt tgaaaattta CD 601 gctaatagat cttaccTtat aggattagaa ataattctgt atttaggctt CD 651 ttttatagct tacgcagtga aactacccat ggttccgtta catacttggt CD 701 taccggatac tcatggagaa gcgTattata gtacatgtat gcttttagcc CD 751 ggaattctac taaaaatggg tggatatgga tCaattcgaa ttaatatgga CD 801 attattatct cacgctTatt ctatatttgc tccatggtta gtagtaatag CD 851 gagctattca aattgtttat tcagcttCaa cttTccttag tcaacttaac CD 901 ttaaaaagaa gaattgctta ttTatTggtc tctcacatgg gttttgtact CD 951 tatcggaatt ggtCctacaa cagatatagg tgttaatgga gctatttCaT CD 1001 aaatgatttc tcatggatta atcggtgctg cacCcttctt tCcagcagga CD 1051 gtaacttacg atagaacacg tactcttttt cttaatcaaa tgggaggaat CD 1101 agctacttct ataccgaaaa tttCtacaat gttcagtagt ttttcaatgg CD 1151 cttctctagc attaccaggg ttaagtggtt tcgtagcaga attaatgatt CD 1201 ttttCaggaa tagttagtag tcaaaatttt tcctttcttt ttaaagtagt CD 1251 cattattatt gtagcagcta ctggaataat attaacccca atttatttgt CD 1301 tatcgatgtt acgaTaaatg ttttatggat atagaattat aaaaaattta CD 1351 acttcatatg ttacggatgc tggaccaaga gaaattttca tctttatttg CD 1401 tctattcttc cctattatag gcatcggttt ttatcTcaaa ttggttcCat CD 1451 ccctatcgaa tagtaaagtt gagtTtatta tatcaggaaa cttctcttct CD 1501 aaataa FT EDITED CDNA CD 1 aTgagcaact ttccctggct aactataatc gttcTtctac ctatatctgc CD 51 aggcttatTa atacctctac ttcctaataa aggtaataga attattCgat CD 101 ggtatacatt aggtatctgt ttggtagaat ttcttcTaat aactTatatt CD 151 ttttgcaact atttccactt cgacaatcaa tttattgaat taaaagaaga CD 201 ttataactgg ataaatCtcc tagattttca ttggagatta gggattgatg CD 251 gactgtccat tgggcttatt ttattaacag gatttataac tacttTagcc CD 301 accCTagcag cttggccaat tactcggaat cccagattat Tctatttttt CD 351 gatgttagcg atgtatagtg gtcaagtagg attatTtgct agtcaagaca CD 401 tttTactttT ttttttcatg tgggaactag aattaattcc agtttattta CD 451 cttctatcta tgtggggggg aaagagacgt ctatatgcag ctacgaagtt CD 501 cattttgtat accgcaggta gttctgtctt tcTatTaatg ggagctttaa CD 551 ctatgggact ttacggatct gacggtccta ccttagactt tgaaaattta CD 601 gctaatagat cttaccCtat aggattagaa ataattctgt atttaggctt CD 651 ttttatagct tacgcagtga aactacccat ggttccgtta catacttggt CD 701 taccggatac tcatggagaa gcgCattata gtacatgtat gcttttagcc CD 751 ggaattctac taaaaatggg tggatatgga tTaattcgaa ttaatatgga CD 801 attattatct cacgctCatt ctatatttgc tccatggtta gtagtaatag CD 851 gagctattca aattgtttat tcagcttTaa cttCccttag tcaacttaac CD 901 ttaaaaagaa gaattgctta ttCatCggtc tctcacatgg gttttgtact CD 951 tatcggaatt ggtTctacaa cagatatagg tgttaatgga gctatttTaC CD 1001 aaatgatttc tcatggatta atcggtgctg cacTcttctt tTcagcagga CD 1051 gtaacttacg atagaacacg tactcttttt cttaatcaaa tgggaggaat CD 1101 agctacttct ataccgaaaa tttTtacaat gttcagtagt ttttcaatgg CD 1151 cttctctagc attaccaggg ttaagtggtt tcgtagcaga attaatgatt CD 1201 ttttTaggaa tagttagtag tcaaaatttt tcctttcttt ttaaagtagt CD 1251 cattattatt gtagcagcta ctggaataat attaacccca atttatttgt CD 1301 tatcgatgtt acgaCaaatg ttttatggat atagaattat aaaaaattta CD 1351 acttcatatg ttacggatgc tggaccaaga gaaattttca tctttatttg CD 1401 tctattcttc cctattatag gcatcggttt ttatcCcaaa ttggttcTat CD 1451 ccctatcgaa tagtaaagtt gagtCtatta tatcaggaaa cttctcttct CD 1501 aaataa SQ SEQUENCE 502 AA; MSNFPWLTII VLLPISAGLL IPLLPNKGNR IIRWYTLGIC LVEFLLITYI FCNYFHFDNQ FIELKEDYNW INLLDFHWRL GIDGLSIGLI LLTGFITTLA TLAAWPITRN PRLFYFLMLA MYSGQVGLFA SQDILLFFFM WELELIPVYL LLSMWGGKRR LYAATKFILY TAGSSVFLLM GALTMGLYGS DGPTLDFENL ANRSYPIGLE IILYLGFFIA YAVKLPMVPL HTWLPDTHGE AHYSTCMLLA GILLKMGGYG LIRINMELLS HAHSIFAPWL VVIGAIQIVY SALTSLSQLN LKRRIAYSSV SHMGFVLIGI GSTTDIGVNG AILQMISHGL IGAALFFSAG VTYDRTRTLF LNQMGGIATS IPKIFTMFSS FSMASLALPG LSGFVAELMI FLGIVSSQNF SFLFKVVIII VAATGIILTP IYLLSMLRQM FYGYRIIKNL TSYVTDAGPR EIFIFICLFF PIIGIGFYPK LVLSLSNSKV ESIISGNFSS K* // ID AB086179_80 STANDARD; PRT; 82 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psaC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55402.1 FT PROTEIN_NAME : photosystem I 9 kDa protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 131356 - 131601 FT DIRECTIONS : negative FT EDITING : 4 P(Ccc) -> S(Tcc) FT EDITING : 16 *(Taa) -> Q(Caa) FT EDITING : 22 L(cTt) -> P(cCt) FT EDITING : 26 S(tCa) -> L(tTa) FT EDITING : 38 *(Taa) -> Q(Caa) FT EDITING : 59 L(cTa) -> P(cCa) FT EDITING : 63 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 246 NT; CD 1 atggcacatC ccgtaaaaat ttatgataca tgtattggtt gcactTaatg CD 51 tgtaagggct tgtcTtacag atgtttCaga aatgataagc tgggatggat CD 101 gtaaggctaa tTaaatagct tctgctccta gaacagaaga ctgtgtaggt CD 151 tgcaaaagat gtgaatccgc ttgtcTaaca gatttttCga gtgtacgtgt CD 201 ttatctgggg tccgaaacga cacgtagtat gggtctagct tattaa FT EDITED CDNA CD 1 atggcacatT ccgtaaaaat ttatgataca tgtattggtt gcactCaatg CD 51 tgtaagggct tgtcCtacag atgtttTaga aatgataagc tgggatggat CD 101 gtaaggctaa tCaaatagct tctgctccta gaacagaaga ctgtgtaggt CD 151 tgcaaaagat gtgaatccgc ttgtcCaaca gatttttTga gtgtacgtgt CD 201 ttatctgggg tccgaaacga cacgtagtat gggtctagct tattaa SQ SEQUENCE 82 AA; MAHSVKIYDT CIGCTQCVRA CPTDVLEMIS WDGCKANQIA SAPRTEDCVG CKRCESACPT DFLSVRVYLG SETTRSMGLA Y* // ID AB086179_82 STANDARD; PRT; 201 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhG FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55404.1 FT PROTEIN_NAME : NADH dehydrogenase ND6 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 132390 - 132992 FT DIRECTIONS : negative FT EDITING : 14 S(tCt) -> F(tTt) FT EDITING : 15 L(Ctt) -> F(Ttt) FT EDITING : 32 P(cCt) -> L(cTt) FT EDITING : 81 A(gCt) -> V(gTt) FT EDITING : 113 P(cCa) -> L(cTa) FT EDITING : 114 S(tCa) -> L(tTa) FT EDITING : 161 P(cCt) -> L(cTt) FT EDITING : 162 P(cCt) -> L(cTt) FT EDITING : 166 P(cCt) -> L(cTt) FT EDITING : 173 V(gTt) -> A(gCt) FT CODON_START : 1 CL CDNALEN 603 NT; CD 1 gtgaacataa taaatctacc tgaactaaat tacgaagttt CtCttgtttt CD 51 tatagaatta ggtcttatat ttggaagttt aggagtagta tttcCtacta CD 101 atatagttta ttccgctttt ctattaggat tggttttcgt ttgcatatct CD 151 tttttatatc tcctactaga tgcggatttt gtagctactg cgcagatttt CD 201 gatctatgtg ggagccgtta atattttaat tgtatttgct gCtatgttaa CD 251 taaataaacc acaatctctt caatttttac catcttggac tgtaggagat CD 301 accattactt taatcctttg tacaagtctt tttttccCat Caatctccat CD 351 gattttgagt atatcatggt caaatatatt ttcgattgca caatcaaata CD 401 aaattggaga acaagtttta aaaagtagtg ttcaaggtat tgggtcttct CD 451 ttactaattg attttttact tccatttgaa cCtcCttcta tagttcCttt CD 501 agttgcttta ataggagTta ttactatagc tcgtagagag aagaaggtta CD 551 aactacagaa aaatcgaacg ttacaagtta ctaaagattc tttcatttta CD 601 tga FT EDITED CDNA CD 1 gtgaacataa taaatctacc tgaactaaat tacgaagttt TtTttgtttt CD 51 tatagaatta ggtcttatat ttggaagttt aggagtagta tttcTtacta CD 101 atatagttta ttccgctttt ctattaggat tggttttcgt ttgcatatct CD 151 tttttatatc tcctactaga tgcggatttt gtagctactg cgcagatttt CD 201 gatctatgtg ggagccgtta atattttaat tgtatttgct gTtatgttaa CD 251 taaataaacc acaatctctt caatttttac catcttggac tgtaggagat CD 301 accattactt taatcctttg tacaagtctt tttttccTat Taatctccat CD 351 gattttgagt atatcatggt caaatatatt ttcgattgca caatcaaata CD 401 aaattggaga acaagtttta aaaagtagtg ttcaaggtat tgggtcttct CD 451 ttactaattg attttttact tccatttgaa cTtcTttcta tagttcTttt CD 501 agttgcttta ataggagCta ttactatagc tcgtagagag aagaaggtta CD 551 aactacagaa aaatcgaacg ttacaagtta ctaaagattc tttcatttta CD 601 tga SQ SEQUENCE 201 AA; VNIINLPELN YEVFFVFIEL GLIFGSLGVV FLTNIVYSAF LLGLVFVCIS FLYLLLDADF VATAQILIYV GAVNILIVFA VMLINKPQSL QFLPSWTVGD TITLILCTSL FFLLISMILS ISWSNIFSIA QSNKIGEQVL KSSVQGIGSS LLIDFLLPFE LLSIVLLVAL IGAITIARRE KKVKLQKNRT LQVTKDSFIL * // ID AB086179_83 STANDARD; PRT; 184 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55405.1 FT PROTEIN_NAME : NADH dehydrogenase 18 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 133113 - 133664 FT DIRECTIONS : negative FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 52 *(Tga) -> R(Cga) FT EDITING : 132 C(Tgt) -> R(Cgt) FT EDITING : 135 S(tCg) -> L(tTg) FT EDITING : 139 *(Tag) -> Q(Cag) FT EDITING : 142 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 552 NT; CD 1 atgttttcta tggtgaatgg atttcggaat tatagtcaac aagcgataca CD 51 ggcctcgaga tacatcggtc agggttttat tgtcacctCa gatcacatga CD 101 atcgtttacc gatgacgatt caataccctt acgagaaatt agttccatca CD 151 gaaTgatttc gtggacgtat tcactttgaa tttgataaat gtatagcttg CD 201 tgaggtatgt gtccgtgtat gtccaatcaa tttacctgta gttgattgga CD 251 aattcaagaa agatataaag aagaaacaat taaaaagtta tagtattgat CD 301 tttggagttt gtatcttttg tggaaattgc gttgaatatt gtcccacgaa CD 351 ctgtttgtcg atgactgagg aatatgaact ttcaacctat gatTgtcatg CD 401 aatCgaatta tgacTagatt gcttCaggac gtttacctat atctataatt CD 451 gaagatcgta caattgaaag tatttcaagt ttcgattttt catccaaaaa CD 501 aattatggaa gaacattcta aatcaagaac tgttactaaa tttttagatt CD 551 ga FT EDITED CDNA CD 1 atgttttcta tggtgaatgg atttcggaat tatagtcaac aagcgataca CD 51 ggcctcgaga tacatcggtc agggttttat tgtcacctTa gatcacatga CD 101 atcgtttacc gatgacgatt caataccctt acgagaaatt agttccatca CD 151 gaaCgatttc gtggacgtat tcactttgaa tttgataaat gtatagcttg CD 201 tgaggtatgt gtccgtgtat gtccaatcaa tttacctgta gttgattgga CD 251 aattcaagaa agatataaag aagaaacaat taaaaagtta tagtattgat CD 301 tttggagttt gtatcttttg tggaaattgc gttgaatatt gtcccacgaa CD 351 ctgtttgtcg atgactgagg aatatgaact ttcaacctat gatCgtcatg CD 401 aatTgaatta tgacCagatt gcttTaggac gtttacctat atctataatt CD 451 gaagatcgta caattgaaag tatttcaagt ttcgattttt catccaaaaa CD 501 aattatggaa gaacattcta aatcaagaac tgttactaaa tttttagatt CD 551 ga SQ SEQUENCE 184 AA; MFSMVNGFRN YSQQAIQASR YIGQGFIVTL DHMNRLPMTI QYPYEKLVPS ERFRGRIHFE FDKCIACEVC VRVCPINLPV VDWKFKKDIK KKQLKSYSID FGVCIFCGNC VEYCPTNCLS MTEEYELSTY DRHELNYDQI ALGRLPISII EDRTIESISS FDFSSKKIME EHSKSRTVTK FLD* // ID AB086179_84 STANDARD; PRT; 367 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55406.1 FT PROTEIN_NAME : NADH dehydrogenase ND1 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 186/1 FT EDITING : 35 P(cCc) -> L(cTc) FT EDITING : 89 T(aCt) -> I(aTt) FT EDITING : 103 L(cTa) -> P(cCa) FT EDITING : 147 S(tCt) -> F(tTt) FT EDITING : 159 S(tCt) -> F(tTt) FT EDITING : 160 S(tCa) -> L(tTa) FT EDITING : 167 V(gTt) -> A(gCt) FT EDITING : 168 *(Taa) -> Q(Caa) FT EDITING : 175 S(Tct) -> P(Cct) FT EDITING : 182 L(CTt) -> S(TCt) FT EDITING : 185 L(Tta) -> L(Cta) FT EDITING : 213 L(cTt) -> P(cCt) FT EDITING : 231 S(Tct) -> P(Cct) FT EDITING : 241 S(tCa) -> L(tTa) FT EDITING : 321 S(tCc) -> F(tTc) FT EDITING : 356 S(tCa) -> L(tTa) FT EDITING : 357 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1101 NT; CD 1 atggtgttca atatgaatct taaagagcaa gccatgagtt tgttctatga CD 51 atcaggattt ccaaaagatt tttttagttt cttatggatt acagcttcta CD 101 ttcCcattct tgtatcagga gttgtaatag gagtattagt cattgtatgg CD 151 cttgaaagaa aaatatctgc aggaatacaa caacgtattg gacctgaata CD 201 tgcaggtcct ctaggaataa ttcaagcttt agcagatgga acgaaactat CD 251 tactaaaaga ggataCtatt ccatctagag gagatgcttt gctatttagt CD 301 attggacTag ctatcgtagt catacctgtt ctcctaagtt acttagtaat CD 351 tccttttggc cataacatta ttttggctga tcttaatata ggtgtatttt CD 401 tttggattgc tgtttccagt atcgctcctc tgggactctC tatggcaggg CD 451 tatggatcaa ataataaata ttcttCttCa ggtggtcttc gagctgtggT CD 501 tTaagctatt agttatgaaa ttTctttagc tttatgtgtg ttaCTtatat CD 551 ctTtactatc taacagttta agtacagttg atatagttga aatacagtcc CD 601 aaatttggtt tttggggttg gaatgtctgg cgccaacTta taggttttat CD 651 agcttttctc attgcctcat tagctgaatg tgagagattg Tctttcgatt CD 701 taccagaagc agaagaggaa tCagttgcag gctatcaaac tgagtattca CD 751 ggtattaaat ttggtttatt ctatgttgct tcttacctaa acttattagt CD 801 atcctcactg tttgtaacag ttctttattt gggtggatgg aacttgtcca CD 851 ttccatttct accaaatttc ccttatttag aatggaaatt tactgctgag CD 901 actagtgagg ttatcaatgt aattataggg attattatta cattagctaa CD 951 agcctattca tCcttattca tttccattgt gacgagatgg accttaccca CD 1001 gagtaagaat ggatcaatta ttaaatcttg gttggaaatt tcttctgcct CD 1051 attgctctag gtaattCatC attgacagct tcttttcaac ttatcgcgta CD 1101 a FT EDITED CDNA CD 1 atggtgttca atatgaatct taaagagcaa gccatgagtt tgttctatga CD 51 atcaggattt ccaaaagatt tttttagttt cttatggatt acagcttcta CD 101 ttcTcattct tgtatcagga gttgtaatag gagtattagt cattgtatgg CD 151 cttgaaagaa aaatatctgc aggaatacaa caacgtattg gacctgaata CD 201 tgcaggtcct ctaggaataa ttcaagcttt agcagatgga acgaaactat CD 251 tactaaaaga ggataTtatt ccatctagag gagatgcttt gctatttagt CD 301 attggacCag ctatcgtagt catacctgtt ctcctaagtt acttagtaat CD 351 tccttttggc cataacatta ttttggctga tcttaatata ggtgtatttt CD 401 tttggattgc tgtttccagt atcgctcctc tgggactctT tatggcaggg CD 451 tatggatcaa ataataaata ttcttTttTa ggtggtcttc gagctgtggC CD 501 tCaagctatt agttatgaaa ttCctttagc tttatgtgtg ttaTCtatat CD 551 ctCtactatc taacagttta agtacagttg atatagttga aatacagtcc CD 601 aaatttggtt tttggggttg gaatgtctgg cgccaacCta taggttttat CD 651 agcttttctc attgcctcat tagctgaatg tgagagattg Cctttcgatt CD 701 taccagaagc agaagaggaa tTagttgcag gctatcaaac tgagtattca CD 751 ggtattaaat ttggtttatt ctatgttgct tcttacctaa acttattagt CD 801 atcctcactg tttgtaacag ttctttattt gggtggatgg aacttgtcca CD 851 ttccatttct accaaatttc ccttatttag aatggaaatt tactgctgag CD 901 actagtgagg ttatcaatgt aattataggg attattatta cattagctaa CD 951 agcctattca tTcttattca tttccattgt gacgagatgg accttaccca CD 1001 gagtaagaat ggatcaatta ttaaatcttg gttggaaatt tcttctgcct CD 1051 attgctctag gtaattTatT attgacagct tcttttcaac ttatcgcgta CD 1101 a SQ SEQUENCE 367 AA; MVFNMNLKEQ AMSLFYESGF PKDFFSFLWI TASILILVSG VVIGVLVIVW LERKISAGIQ QRIGPEYAGP LGIIQALADG TKLLLKEDII PSRGDALLFS IGPAIVVIPV LLSYLVIPFG HNIILADLNI GVFFWIAVSS IAPLGLFMAG YGSNNKYSFL GGLRAVAQAI SYEIPLALCV LSISLLSNSL STVDIVEIQS KFGFWGWNVW RQPIGFIAFL IASLAECERL PFDLPEAEEE LVAGYQTEYS GIKFGLFYVA SYLNLLVSSL FVTVLYLGGW NLSIPFLPNF PYLEWKFTAE TSEVINVIIG IIITLAKAYS FLFISIVTRW TLPRVRMDQL LNLGWKFLLP IALGNLLLTA SFQLIA* // ID AB086179_85 STANDARD; PRT; 394 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhH FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55407.2 FT PROTEIN_NAME : NADH dehydrogenase 49 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 135734 - 136915 FT DIRECTIONS : negative FT EDITING : 32 P(cCa) -> L(cTa) FT EDITING : 42 L(cTt) -> P(cCt) FT EDITING : 75 I(aTc) -> T(aCc) FT EDITING : 110 C(Tgc) -> R(Cgc) FT EDITING : 128 *(Taa) -> Q(Caa) FT EDITING : 130 L(cTt) -> P(cCt) FT EDITING : 147 V(gTt) -> A(gCt) FT EDITING : 157 S(tCt) -> F(tTt) FT EDITING : 167 L(Ctg) -> L(Ttg) FT EDITING : 168 L(cTt) -> P(cCt) FT EDITING : 169 H(Cat) -> Y(Tat) FT EDITING : 182 S(tCt) -> F(tTt) FT EDITING : 202 *(Tga) -> R(Cga) FT EDITING : 209 T(aCt) -> I(aTt) FT EDITING : 215 T(aCa) -> I(aTa) FT EDITING : 230 *(Taa) -> Q(Caa) FT EDITING : 234 C(Tgt) -> R(Cgt) FT EDITING : 260 C(Tgt) -> R(Cgt) FT EDITING : 290 S(tCa) -> L(tTa) FT EDITING : 293 *(Tga) -> R(Cga) FT EDITING : 295 L(ctC) -> L(ctT) FT EDITING : 341 P(cCa) -> L(cTa) FT EDITING : 349 L(cTt) -> P(cCt) FT EDITING : 393 C(Tgt) -> R(Cgt) FT CODON_START : 1 CL CDNALEN 1182 NT; CD 1 atgaccatgc ttgctgcaaa ggcagatcct atgacactta gtatgggtcc CD 51 tcatcaccca tcaatgcatg gtgttcttcg acttatagtt actcCagatg CD 101 gtgaaaatgt tactgattgt gaacTtatat taggttattt gcatagagga CD 151 atggaaaaaa ttgctgaaaa tagaacaatt gttcaatatc ttccttatgt CD 201 aacacggtgg gattatttag ctaTcatgtt tacggaggca ataacggtaa CD 251 atgcgccgga aaagttgacg aatattcaag tacctaagag agctagctat CD 301 ataagaataa ttatgctaga gttaagtTgc atagcttctc atttgttgtg CD 351 gctcggacct ttcatggctg atatcggtgc aTaaacacTt ttcttttata CD 401 ttcttagaga aagagaaatg atatatgatt tatttgaggT tgctactggg CD 451 atgagaatga tgcataattC ttttcgtatt ggaggagtag ctgtagatCt CD 501 gcTtCatggt tgggtagata aatgtttgga tttctgtgac tattCttcac CD 551 taaaggtaga tgaatatgaa agacttatta catataattc gatatttctg CD 601 aaaTgagtag agggagtagg tactaCtagt agagaagaag ctaCaaattg CD 651 gggtttatca ggacttatgt tacgagcttc aggggttTaa tgggatcttT CD 701 gtaaagtaga tcattacgaa tgttatgatg aattagactg gcaagttcaa CD 751 agtcagacag aaggagattc attagctTgt tatttagtga gaattgggga CD 801 aatgagagaa tctgtcaaga ttattcagca agctttaaaa gtaattccgg CD 851 gaggacctta tgaaaattCa gaagctTgac gactCaatca aggaaaagac CD 901 tcggaatgga atgattttga atatcaattt attagtaaaa agccttctcc CD 951 tacttttaaa ttaccaaaac aggagcatta tataagagta gaagctccta CD 1001 aaggagaatt aggtatttat cCaattggag atgatagcgt ttttcTttgg CD 1051 agatggaaga ttcgtccacc tggttttatc aatctgcaaa ttcttcctca CD 1101 attagttaaa ggaatgaaat tggcagatat catgacaatt ttaggtagta CD 1151 tagatattat tatgggagag gttgatTgtt aa FT EDITED CDNA CD 1 atgaccatgc ttgctgcaaa ggcagatcct atgacactta gtatgggtcc CD 51 tcatcaccca tcaatgcatg gtgttcttcg acttatagtt actcTagatg CD 101 gtgaaaatgt tactgattgt gaacCtatat taggttattt gcatagagga CD 151 atggaaaaaa ttgctgaaaa tagaacaatt gttcaatatc ttccttatgt CD 201 aacacggtgg gattatttag ctaCcatgtt tacggaggca ataacggtaa CD 251 atgcgccgga aaagttgacg aatattcaag tacctaagag agctagctat CD 301 ataagaataa ttatgctaga gttaagtCgc atagcttctc atttgttgtg CD 351 gctcggacct ttcatggctg atatcggtgc aCaaacacCt ttcttttata CD 401 ttcttagaga aagagaaatg atatatgatt tatttgaggC tgctactggg CD 451 atgagaatga tgcataattT ttttcgtatt ggaggagtag ctgtagatTt CD 501 gcCtTatggt tgggtagata aatgtttgga tttctgtgac tattTttcac CD 551 taaaggtaga tgaatatgaa agacttatta catataattc gatatttctg CD 601 aaaCgagtag agggagtagg tactaTtagt agagaagaag ctaTaaattg CD 651 gggtttatca ggacttatgt tacgagcttc aggggttCaa tgggatcttC CD 701 gtaaagtaga tcattacgaa tgttatgatg aattagactg gcaagttcaa CD 751 agtcagacag aaggagattc attagctCgt tatttagtga gaattgggga CD 801 aatgagagaa tctgtcaaga ttattcagca agctttaaaa gtaattccgg CD 851 gaggacctta tgaaaattTa gaagctCgac gactTaatca aggaaaagac CD 901 tcggaatgga atgattttga atatcaattt attagtaaaa agccttctcc CD 951 tacttttaaa ttaccaaaac aggagcatta tataagagta gaagctccta CD 1001 aaggagaatt aggtatttat cTaattggag atgatagcgt ttttcCttgg CD 1051 agatggaaga ttcgtccacc tggttttatc aatctgcaaa ttcttcctca CD 1101 attagttaaa ggaatgaaat tggcagatat catgacaatt ttaggtagta CD 1151 tagatattat tatgggagag gttgatCgtt aa SQ SEQUENCE 394 AA; MTMLAAKADP MTLSMGPHHP SMHGVLRLIV TLDGENVTDC EPILGYLHRG MEKIAENRTI VQYLPYVTRW DYLATMFTEA ITVNAPEKLT NIQVPKRASY IRIIMLELSR IASHLLWLGP FMADIGAQTP FFYILREREM IYDLFEAATG MRMMHNFFRI GGVAVDLPYG WVDKCLDFCD YFSLKVDEYE RLITYNSIFL KRVEGVGTIS REEAINWGLS GLMLRASGVQ WDLRKVDHYE CYDELDWQVQ SQTEGDSLAR YLVRIGEMRE SVKIIQQALK VIPGGPYENL EARRLNQGKD SEWNDFEYQF ISKKPSPTFK LPKQEHYIRV EAPKGELGIY LIGDDSVFPW RWKIRPPGFI NLQILPQLVK GMKLADIMTI LGSIDIIMGE VDR* // ID AB086179_87 STANDARD; PRT; 474 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ORF473 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55408.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 137666 - 139087 FT DIRECTIONS : negative FT EDITING : 129 P(cCt) -> L(cTt) FT EDITING : 239 *(Tga) -> R(Cga) FT EDITING : 275 *(Taa) -> Q(Caa) FT EDITING : 389 S(tCa) -> L(tTa) FT EDITING : 440 *(Tga) -> R(Cga) FT EDITING : 459 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 1422 NT; CD 1 atgaataaat gttatctcaa atatttatta caatcttgga ccccccgtta CD 51 ttctattaga agtaatacta gaaatttttt acaagagata cttagtttca CD 101 acgaaccaca aaatttgaca gaaagtaact ggaaacgatg gttacaatgt CD 151 ttcaatcgat ataatttacc tttacaaatg tggtataaaa tatcaccaca CD 201 gcaatggaaa agtcaggtta gtaaacactg gaaagataga aatcattttt CD 251 ctaaaaattc tcatcggaaa aaccagagtt tacttcttta taaacaaaag CD 301 gaattttatt ctatatttgc ttcagattct tcttcaagat acactagaga CD 351 gattgagaga cttaataaac gttatagatg taaccCtttt ctttatagct CD 401 atctcgatca tacaaaaagt ttaaacatga gaagatttcc tgtgtggcga CD 451 agtgaagaaa gagaaactat attgaataat cgtattaaag aaatacgtaa CD 501 ttttcattta ttcaataatg aaaggaataa cgaaaattct attaattctt CD 551 taggaaaaga aaaaaatctt ttttttagat ctaatttagt tttgtggtta CD 601 gttccagaat ttctaggaaa gaagaatata cacaaaacag aattcatacc CD 651 agttttttat ccttctttag tcagggagag aggtgaaaaa actattcaaa CD 701 atagaaaatc acttTgagaa agggaacgtc atgaatctat tcgtcaatgg CD 751 agatgggaat ctaaagattt agaagaaaga ttcaaagaat tgggagatat CD 801 ggcttctgtt atgactttta ttTaaaataa gaaaaatatt atttcacttt CD 851 ctgttaagat gcgtgaagat ttagatctat ttcgtctcct ctttcgtaga CD 901 gatataggtt taaatagatt aacaattaat tcggaacatc gtttaccgcg CD 951 agtattagat gatgaaatct taatgtgtaa aatcataact actctactaa CD 1001 agtttaaatc tagatttcaa gaaagattag atttcaatat ttttgatgaa CD 1051 tctatatcac ggatacgaaa atttgaaagt gaaaggaaaa ccatttccaa CD 1101 gtcgttcagt cttgaagaaa tattgcttcc gaagcgttgt aaagaattaa CD 1151 gaatattaaa ttcttCatat tcaaagtatg atatcaatga agaagcgaaa CD 1201 tttgatgaag ggtctttagg aaaaaatagg gggagtaacg agaagttggt CD 1251 aaggataaat gaggaattta atacaaatgt aaatcaaagt attaaacgtt CD 1301 ttctctggcc tagttatTga ttggaagatc tagcttgcat gaatagattt CD 1351 tggtttaata ctagtaatgg aagtTgattc tccatgctaa gaattcgtct CD 1401 ctatcttcta attcatgatt aa FT EDITED CDNA CD 1 atgaataaat gttatctcaa atatttatta caatcttgga ccccccgtta CD 51 ttctattaga agtaatacta gaaatttttt acaagagata cttagtttca CD 101 acgaaccaca aaatttgaca gaaagtaact ggaaacgatg gttacaatgt CD 151 ttcaatcgat ataatttacc tttacaaatg tggtataaaa tatcaccaca CD 201 gcaatggaaa agtcaggtta gtaaacactg gaaagataga aatcattttt CD 251 ctaaaaattc tcatcggaaa aaccagagtt tacttcttta taaacaaaag CD 301 gaattttatt ctatatttgc ttcagattct tcttcaagat acactagaga CD 351 gattgagaga cttaataaac gttatagatg taaccTtttt ctttatagct CD 401 atctcgatca tacaaaaagt ttaaacatga gaagatttcc tgtgtggcga CD 451 agtgaagaaa gagaaactat attgaataat cgtattaaag aaatacgtaa CD 501 ttttcattta ttcaataatg aaaggaataa cgaaaattct attaattctt CD 551 taggaaaaga aaaaaatctt ttttttagat ctaatttagt tttgtggtta CD 601 gttccagaat ttctaggaaa gaagaatata cacaaaacag aattcatacc CD 651 agttttttat ccttctttag tcagggagag aggtgaaaaa actattcaaa CD 701 atagaaaatc acttCgagaa agggaacgtc atgaatctat tcgtcaatgg CD 751 agatgggaat ctaaagattt agaagaaaga ttcaaagaat tgggagatat CD 801 ggcttctgtt atgactttta ttCaaaataa gaaaaatatt atttcacttt CD 851 ctgttaagat gcgtgaagat ttagatctat ttcgtctcct ctttcgtaga CD 901 gatataggtt taaatagatt aacaattaat tcggaacatc gtttaccgcg CD 951 agtattagat gatgaaatct taatgtgtaa aatcataact actctactaa CD 1001 agtttaaatc tagatttcaa gaaagattag atttcaatat ttttgatgaa CD 1051 tctatatcac ggatacgaaa atttgaaagt gaaaggaaaa ccatttccaa CD 1101 gtcgttcagt cttgaagaaa tattgcttcc gaagcgttgt aaagaattaa CD 1151 gaatattaaa ttcttTatat tcaaagtatg atatcaatga agaagcgaaa CD 1201 tttgatgaag ggtctttagg aaaaaatagg gggagtaacg agaagttggt CD 1251 aaggataaat gaggaattta atacaaatgt aaatcaaagt attaaacgtt CD 1301 ttctctggcc tagttatCga ttggaagatc tagcttgcat gaatagattt CD 1351 tggtttaata ctagtaatgg aagtCgattc tccatgctaa gaattcgtct CD 1401 ctatcttcta attcatgatt aa SQ SEQUENCE 474 AA; MNKCYLKYLL QSWTPRYSIR SNTRNFLQEI LSFNEPQNLT ESNWKRWLQC FNRYNLPLQM WYKISPQQWK SQVSKHWKDR NHFSKNSHRK NQSLLLYKQK EFYSIFASDS SSRYTREIER LNKRYRCNLF LYSYLDHTKS LNMRRFPVWR SEERETILNN RIKEIRNFHL FNNERNNENS INSLGKEKNL FFRSNLVLWL VPEFLGKKNI HKTEFIPVFY PSLVRERGEK TIQNRKSLRE RERHESIRQW RWESKDLEER FKELGDMASV MTFIQNKKNI ISLSVKMRED LDLFRLLFRR DIGLNRLTIN SEHRLPRVLD DEILMCKIIT TLLKFKSRFQ ERLDFNIFDE SISRIRKFES ERKTISKSFS LEEILLPKRC KELRILNSLY SKYDINEEAK FDEGSLGKNR GSNEKLVRIN EEFNTNVNQS IKRFLWPSYR LEDLACMNRF WFNTSNGSRF SMLRIRLYLL IHD* // ID AB086179_88 STANDARD; PRT; 1032 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ORF1031 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55409.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 139569 - 142664 FT DIRECTIONS : negative FT EDITING : 26 P(cCg) -> L(cTg) FT EDITING : 36 P(Ccc) -> S(Tcc) FT EDITING : 71 *(Taa) -> Q(Caa) FT EDITING : 75 L(ctT) -> L(ctC) FT EDITING : 103 S(tCt) -> F(tTt) FT EDITING : 130 *(Taa) -> Q(Caa) FT EDITING : 168 S(tCt) -> F(tTt) FT EDITING : 218 S(tCt) -> F(tTt) FT EDITING : 348 *(Taa) -> Q(Caa) FT EDITING : 408 *(Taa) -> Q(Caa) FT EDITING : 470 P(cCt) -> L(cTt) FT EDITING : 537 *(Tga) -> R(Cga) FT EDITING : 566 S(tCt) -> F(tTt) FT EDITING : 618 C(Tgt) -> R(Cgt) FT EDITING : 672 L(Ctt) -> F(Ttt) FT EDITING : 680 L(Tta) -> L(Cta) FT EDITING : 813 *(Taa) -> Q(Caa) FT EDITING : 819 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 3096 NT; CD 1 atgataacaa gcattacctt actgttttct atattatggg ctcaaatatt CD 51 atcatggata agtatatcgg gtcctcCgat tttatttgga ctatattacg CD 101 gatttCccat aacattacct atgggccctt ctcagatttt atctatcaga CD 151 gcttttttat tagaaggaaa tcttagtggt ttaatggcct tgggtggttc CD 201 gactctagga Taattaataa tactTatatc aatattctat tcgcctcttt CD 251 atataatgct actaaaacct catgcaataa ctttaattac tttaccatat CD 301 gttttatCtt attggtacga aataaaagat ctttcagatt atcaaccttt CD 351 acgccctata acatcactta atgatactgg aattattTaa atatttctga CD 401 atagttttct ctttcaaata tttaatccca ttcttttacc aagtcccgtg CD 451 ttaacaagat tagtaaaact ttttttattt cgttatagcc ataattcatt CD 501 ctCtgttata agtctcttct gtggttggtt gggtggtaat attttgctta CD 551 taaatttaag taagtttctt ctaattcgta taaaaaataa ttcatctaca CD 601 ctttatctct tagtcaaacg tcttatttat cgaactttta gtattattat CD 651 ttCtgttgct tgtttatcat acttaggtaa atttccagta cctttctcta CD 701 tgaaaaaatc aagtgatgaa tcttcattaa atgaatggaa agctgagaga CD 751 ttatcatggt tatataaacc atggcctact tctctcttta attatcgtaa CD 801 atggaatcga ccgttacgat atattgaaaa tagtcggttt agtaataaga CD 851 gtcccgtaaa aagaaatgta tctcaatatt tttttgatgt atgtttgaat CD 901 gatgggagac aaagaatatc tttcacatct ttacctagtt tttcaatttt CD 951 tgaaaaaaat ttgaaaaact acttaaacgt ttcgagaatt tcctcctcat CD 1001 ctgatgtttt ttatcaggag tggattaata cgaagaaaga aTaaaaagat CD 1051 gatttgtata gcgaagtaga agaaagaatt aaagctttag acaatggatt CD 1101 ttctttagag catgctatag aaaaaagaat aggattttct agtattaata CD 1151 aagaagatat tcctaataaa acttatgatc cttttttaga tggagaattc CD 1201 cgcggaaaag ttgcagtatc aTaatcacct ttacttctga cggggaagtc CD 1251 ctacgggtta accaagacac aaaagttact ccatttatcg aggaagaata CD 1301 ataaattaaa attttggatt tctaataaat ggcgaaagtt ggaacgtaag CD 1351 gatctaccat tgccttggga accactaacc caagatgctc gtcgagtttt CD 1401 gattttacCt attaaaggat tgaggaataa gaaatctaag atagactcac CD 1451 agagaaatga tttttcaaaa gaacaaggag taatagctct aaatgaagaa CD 1501 aatatttctc ccgaattctc agcaaagact aacaatacaa actttttacg CD 1551 agaaaaagca attcgaaaat cacatattaa ttgggaactt gttttaaatc CD 1601 tctctctcTg acaaagaatt ttatacttta attatttgga gaaggttaaa CD 1651 tgggagacga ttaaaaattc ttggaaagat ttaatatcgg gtaactCtac CD 1701 tgaagtcaaa aatattggtt ctttagtgat gaaaataatg aaaatccatc CD 1751 aggaatctcc acttcaagaa tttcataaag aggtacctcg ctggacttcg CD 1801 aaactgaaaa atgataaatt tgatgttata gctattggag ttactgatat CD 1851 tTgtcaaaga aaagtaagaa atttaggtta tcttattaag gggagagaaa CD 1901 agagaagaaa gattgtaaga cgtttttcac aacaatcaga ttttcgtcgg CD 1951 aaactcataa agggatctat gcgtgctaga agacgcaaaa ctttgatatg CD 2001 gaaaatttta caaCttaaaa cacattctcc tttttttTta aaaataacgg CD 2051 aaaaacccgc tttgtttcga tctacggaaa ttatggaaga tatagatgta CD 2101 aaagggactt ttctaaatac tataggaatt gaaaaattaa tatctttgtt CD 2151 aagtgagaga ggagttgcta tcaaaggaac aaaagccgat cgccttgcaa CD 2201 tagcaaatag atgggatttt ccattagctc aatggggaag aagttggtta CD 2251 ttaattattc aatcgtatct taggaaatat gtggtactac ctatattaat CD 2301 aatactaaaa aatattagtc gtttatttct attacaagtt cctgaatgga CD 2351 atgaagattg gaatgaatgg agtgaggaga ttcatataaa atgcacttat CD 2401 gatgggactg aagtttcaga aagggaatta ccagaaTaat ggcttaggga CD 2451 tggtcCtcag ataaaaataa tttatccttt tcatttaaaa ccttggcata CD 2501 attctaagtt caaagaaaag gggaatagaa atatggaacc taattttcct CD 2551 catactcaga acaaaggaaa agaaacatca gataataaag catatagatt CD 2601 acaaaaaaac aagaaattta aatatagttt tttaacagct tggggatttc CD 2651 aaactaactt accttttggt aatataaaga aacaaccttc tttttggaaa CD 2701 ccagttatta aagaattgaa aaagagatgg aaaagagaga ttctctcaaa CD 2751 aactgctaat ttttatgaac tttattacaa tatatcgcta ctatacagaa CD 2801 aatccgatat ttctaataga tttaaaattt ttgcagaatt tgatattcaa CD 2851 acagatgaac gtatgaatca tgaaatatct aaaattcaag tcaatagtga CD 2901 atccggtgga gctagtgtta cggatgatgg aattaaaaga gaatcacctc CD 2951 taggtattac tcttaattct gaaaattcaa atttcagtga aaatgaagat CD 3001 tttctgtggg aaattccagt tgaatctaga tataaaactg cgaaaaacat CD 3051 taagaaatta gaaagtttag tcgtatctaa gaataatcta acttga FT EDITED CDNA CD 1 atgataacaa gcattacctt actgttttct atattatggg ctcaaatatt CD 51 atcatggata agtatatcgg gtcctcTgat tttatttgga ctatattacg CD 101 gatttTccat aacattacct atgggccctt ctcagatttt atctatcaga CD 151 gcttttttat tagaaggaaa tcttagtggt ttaatggcct tgggtggttc CD 201 gactctagga Caattaataa tactCatatc aatattctat tcgcctcttt CD 251 atataatgct actaaaacct catgcaataa ctttaattac tttaccatat CD 301 gttttatTtt attggtacga aataaaagat ctttcagatt atcaaccttt CD 351 acgccctata acatcactta atgatactgg aattattCaa atatttctga CD 401 atagttttct ctttcaaata tttaatccca ttcttttacc aagtcccgtg CD 451 ttaacaagat tagtaaaact ttttttattt cgttatagcc ataattcatt CD 501 ctTtgttata agtctcttct gtggttggtt gggtggtaat attttgctta CD 551 taaatttaag taagtttctt ctaattcgta taaaaaataa ttcatctaca CD 601 ctttatctct tagtcaaacg tcttatttat cgaactttta gtattattat CD 651 ttTtgttgct tgtttatcat acttaggtaa atttccagta cctttctcta CD 701 tgaaaaaatc aagtgatgaa tcttcattaa atgaatggaa agctgagaga CD 751 ttatcatggt tatataaacc atggcctact tctctcttta attatcgtaa CD 801 atggaatcga ccgttacgat atattgaaaa tagtcggttt agtaataaga CD 851 gtcccgtaaa aagaaatgta tctcaatatt tttttgatgt atgtttgaat CD 901 gatgggagac aaagaatatc tttcacatct ttacctagtt tttcaatttt CD 951 tgaaaaaaat ttgaaaaact acttaaacgt ttcgagaatt tcctcctcat CD 1001 ctgatgtttt ttatcaggag tggattaata cgaagaaaga aCaaaaagat CD 1051 gatttgtata gcgaagtaga agaaagaatt aaagctttag acaatggatt CD 1101 ttctttagag catgctatag aaaaaagaat aggattttct agtattaata CD 1151 aagaagatat tcctaataaa acttatgatc cttttttaga tggagaattc CD 1201 cgcggaaaag ttgcagtatc aCaatcacct ttacttctga cggggaagtc CD 1251 ctacgggtta accaagacac aaaagttact ccatttatcg aggaagaata CD 1301 ataaattaaa attttggatt tctaataaat ggcgaaagtt ggaacgtaag CD 1351 gatctaccat tgccttggga accactaacc caagatgctc gtcgagtttt CD 1401 gattttacTt attaaaggat tgaggaataa gaaatctaag atagactcac CD 1451 agagaaatga tttttcaaaa gaacaaggag taatagctct aaatgaagaa CD 1501 aatatttctc ccgaattctc agcaaagact aacaatacaa actttttacg CD 1551 agaaaaagca attcgaaaat cacatattaa ttgggaactt gttttaaatc CD 1601 tctctctcCg acaaagaatt ttatacttta attatttgga gaaggttaaa CD 1651 tgggagacga ttaaaaattc ttggaaagat ttaatatcgg gtaactTtac CD 1701 tgaagtcaaa aatattggtt ctttagtgat gaaaataatg aaaatccatc CD 1751 aggaatctcc acttcaagaa tttcataaag aggtacctcg ctggacttcg CD 1801 aaactgaaaa atgataaatt tgatgttata gctattggag ttactgatat CD 1851 tCgtcaaaga aaagtaagaa atttaggtta tcttattaag gggagagaaa CD 1901 agagaagaaa gattgtaaga cgtttttcac aacaatcaga ttttcgtcgg CD 1951 aaactcataa agggatctat gcgtgctaga agacgcaaaa ctttgatatg CD 2001 gaaaatttta caaTttaaaa cacattctcc tttttttCta aaaataacgg CD 2051 aaaaacccgc tttgtttcga tctacggaaa ttatggaaga tatagatgta CD 2101 aaagggactt ttctaaatac tataggaatt gaaaaattaa tatctttgtt CD 2151 aagtgagaga ggagttgcta tcaaaggaac aaaagccgat cgccttgcaa CD 2201 tagcaaatag atgggatttt ccattagctc aatggggaag aagttggtta CD 2251 ttaattattc aatcgtatct taggaaatat gtggtactac ctatattaat CD 2301 aatactaaaa aatattagtc gtttatttct attacaagtt cctgaatgga CD 2351 atgaagattg gaatgaatgg agtgaggaga ttcatataaa atgcacttat CD 2401 gatgggactg aagtttcaga aagggaatta ccagaaCaat ggcttaggga CD 2451 tggtcTtcag ataaaaataa tttatccttt tcatttaaaa ccttggcata CD 2501 attctaagtt caaagaaaag gggaatagaa atatggaacc taattttcct CD 2551 catactcaga acaaaggaaa agaaacatca gataataaag catatagatt CD 2601 acaaaaaaac aagaaattta aatatagttt tttaacagct tggggatttc CD 2651 aaactaactt accttttggt aatataaaga aacaaccttc tttttggaaa CD 2701 ccagttatta aagaattgaa aaagagatgg aaaagagaga ttctctcaaa CD 2751 aactgctaat ttttatgaac tttattacaa tatatcgcta ctatacagaa CD 2801 aatccgatat ttctaataga tttaaaattt ttgcagaatt tgatattcaa CD 2851 acagatgaac gtatgaatca tgaaatatct aaaattcaag tcaatagtga CD 2901 atccggtgga gctagtgtta cggatgatgg aattaaaaga gaatcacctc CD 2951 taggtattac tcttaattct gaaaattcaa atttcagtga aaatgaagat CD 3001 tttctgtggg aaattccagt tgaatctaga tataaaactg cgaaaaacat CD 3051 taagaaatta gaaagtttag tcgtatctaa gaataatcta acttga SQ SEQUENCE 1032 AA; MITSITLLFS ILWAQILSWI SISGPLILFG LYYGFSITLP MGPSQILSIR AFLLEGNLSG LMALGGSTLG QLIILISIFY SPLYIMLLKP HAITLITLPY VLFYWYEIKD LSDYQPLRPI TSLNDTGIIQ IFLNSFLFQI FNPILLPSPV LTRLVKLFLF RYSHNSFFVI SLFCGWLGGN ILLINLSKFL LIRIKNNSST LYLLVKRLIY RTFSIIIFVA CLSYLGKFPV PFSMKKSSDE SSLNEWKAER LSWLYKPWPT SLFNYRKWNR PLRYIENSRF SNKSPVKRNV SQYFFDVCLN DGRQRISFTS LPSFSIFEKN LKNYLNVSRI SSSSDVFYQE WINTKKEQKD DLYSEVEERI KALDNGFSLE HAIEKRIGFS SINKEDIPNK TYDPFLDGEF RGKVAVSQSP LLLTGKSYGL TKTQKLLHLS RKNNKLKFWI SNKWRKLERK DLPLPWEPLT QDARRVLILL IKGLRNKKSK IDSQRNDFSK EQGVIALNEE NISPEFSAKT NNTNFLREKA IRKSHINWEL VLNLSLRQRI LYFNYLEKVK WETIKNSWKD LISGNFTEVK NIGSLVMKIM KIHQESPLQE FHKEVPRWTS KLKNDKFDVI AIGVTDIRQR KVRNLGYLIK GREKRRKIVR RFSQQSDFRR KLIKGSMRAR RRKTLIWKIL QFKTHSPFFL KITEKPALFR STEIMEDIDV KGTFLNTIGI EKLISLLSER GVAIKGTKAD RLAIANRWDF PLAQWGRSWL LIIQSYLRKY VVLPILIILK NISRLFLLQV PEWNEDWNEW SEEIHIKCTY DGTEVSEREL PEQWLRDGLQ IKIIYPFHLK PWHNSKFKEK GNRNMEPNFP HTQNKGKETS DNKAYRLQKN KKFKYSFLTA WGFQTNLPFG NIKKQPSFWK PVIKELKKRW KREILSKTAN FYELYYNISL LYRKSDISNR FKIFAEFDIQ TDERMNHEIS KIQVNSESGG ASVTDDGIKR ESPLGITLNS ENSNFSENED FLWEIPVESR YKTAKNIKKL ESLVVSKNNL T* // ID AB086179_89 STANDARD; PRT; 472 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : chlN FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55410.1 FT PROTEIN_NAME : protochlorophyllide reductase 48 kDa chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 142902 - 144317 FT DIRECTIONS : negative FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 32 *(Taa) -> Q(Caa) FT EDITING : 50 F(ttC) -> F(ttT) FT EDITING : 60 L(Ctt) -> F(Ttt) FT EDITING : 65 H(Cat) -> Y(Tat) FT EDITING : 70 S(tCa) -> L(tTa) FT EDITING : 85 S(tCa) -> L(tTa) FT EDITING : 101 T(aCt) -> I(aTt) FT EDITING : 111 T(aCa) -> I(aTa) FT EDITING : 143 S(tCt) -> F(tTt) FT EDITING : 145 *(Taa) -> Q(Caa) FT EDITING : 151 P(cCa) -> L(cTa) FT EDITING : 152 V(gTt) -> A(gCt) FT EDITING : 254 L(cTt) -> P(cCt) FT EDITING : 255 P(CCt) -> F(TTt) FT EDITING : 256 S(tCa) -> L(tTa) FT EDITING : 258 *(Tga) -> R(Cga) FT EDITING : 277 L(cTa) -> P(cCa) FT EDITING : 325 S(tCt) -> F(tTt) FT EDITING : 326 S(tCt) -> F(tTt) FT EDITING : 353 L(cTa) -> P(cCa) FT EDITING : 364 P(cCa) -> L(cTa) FT EDITING : 366 P(cCt) -> L(cTt) FT EDITING : 379 L(TTg) -> P(CCg) FT EDITING : 429 *(Taa) -> Q(Caa) FT EDITING : 440 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 1416 NT; CD 1 atgtcaatcc aaatatctga aactctcact tttgaatgcg aaacaggtaa CD 51 ttaccatact ttttgtccta ttagttgtgt agcttggtCa tacTaaaaaa CD 101 tagaagatag ttttttttta gtgataggta caaaaacatg tggttatttC CD 151 ttacaaaacg ctcttggtgt tatgattCtt gcagaaccac gtCatgctat CD 201 ggcagaatCa gaagagggag atatttcagc tcaattaaat gattatgaag CD 251 aatCaaaaag actttgtttt caaataaaga aggatagaaa tcctagtgtt CD 301 aCtatatgga tcggtacctg tacgactgaa aCaataaaga tggatttgga CD 351 aggaatggca ccgaaattag aagtggaact tggagtacca attgtagtag CD 401 caagagcaaa tggattagat tatgcttCta ctTaaggaga agataccgta CD 451 cCagTtgcta tggcccaccg ttgcccagaa cgagatttgt tgattgatga CD 501 aaataaagtt atacaaaatc aaactataca aaatattttt tctctttttt CD 551 ctcaaaaaaa gaaagaggaa actttgaaat atctagaatt gaaaaatcat CD 601 cctccattag ttctcttcgg atccctaccc tctactgtag cttctcaact CD 651 tagcttagaa ttgaagcgtc aatctattca agtatctggt tggttaccga CD 701 ctcagagata taccgatctt ccatcactag gtgatggagt ttatgtttgt CD 751 ggtgttaatc TtCCttCaag cTgaacagca accactttga tacgacgtcg CD 801 gaaatgcaaa ttaattggag caccttttcT aattggtcct gatggaacac CD 851 gtgcttggat tgaaaaaata agttctgttt ttgggatcaa gaccaaaggt CD 901 ttggaggaga gggaacaaca ggtatggcaa agtttgaaga attatcttaa CD 951 cctagtgcgt ggaaaatccg tttCttCtat gggagataat cttttagaaa CD 1001 tatctttagc aagattttta attcgatgcg gaatgattgt ttatgaaatt CD 1051 ggtattcTat atatggataa gaggtatcaa gctgctgaac CagcacCttt CD 1101 aagaaatacg tgtagagaga tgtgtacacc tatgTTgaga attgttgaga CD 1151 aacctgataa ttataatcag atacaacgta tgcgtgagtt gcaaccagat CD 1201 ttagccataa ctggaatggc tcatgctaat ccattagaag ctagaggaat CD 1251 taacacaaaa tggtcagttg aatttacttt tgctTaaatt catggattta CD 1301 ctaatgccaa agatgtgcCt gaacttgtga cccgtccttt acgacgtaac CD 1351 aatagtttag aagatttggg ttggacaaat ttaataaaga aagacaataa CD 1401 aataaaagta atttaa FT EDITED CDNA CD 1 atgtcaatcc aaatatctga aactctcact tttgaatgcg aaacaggtaa CD 51 ttaccatact ttttgtccta ttagttgtgt agcttggtTa tacCaaaaaa CD 101 tagaagatag ttttttttta gtgataggta caaaaacatg tggttatttT CD 151 ttacaaaacg ctcttggtgt tatgattTtt gcagaaccac gtTatgctat CD 201 ggcagaatTa gaagagggag atatttcagc tcaattaaat gattatgaag CD 251 aatTaaaaag actttgtttt caaataaaga aggatagaaa tcctagtgtt CD 301 aTtatatgga tcggtacctg tacgactgaa aTaataaaga tggatttgga CD 351 aggaatggca ccgaaattag aagtggaact tggagtacca attgtagtag CD 401 caagagcaaa tggattagat tatgcttTta ctCaaggaga agataccgta CD 451 cTagCtgcta tggcccaccg ttgcccagaa cgagatttgt tgattgatga CD 501 aaataaagtt atacaaaatc aaactataca aaatattttt tctctttttt CD 551 ctcaaaaaaa gaaagaggaa actttgaaat atctagaatt gaaaaatcat CD 601 cctccattag ttctcttcgg atccctaccc tctactgtag cttctcaact CD 651 tagcttagaa ttgaagcgtc aatctattca agtatctggt tggttaccga CD 701 ctcagagata taccgatctt ccatcactag gtgatggagt ttatgtttgt CD 751 ggtgttaatc CtTTttTaag cCgaacagca accactttga tacgacgtcg CD 801 gaaatgcaaa ttaattggag caccttttcC aattggtcct gatggaacac CD 851 gtgcttggat tgaaaaaata agttctgttt ttgggatcaa gaccaaaggt CD 901 ttggaggaga gggaacaaca ggtatggcaa agtttgaaga attatcttaa CD 951 cctagtgcgt ggaaaatccg tttTttTtat gggagataat cttttagaaa CD 1001 tatctttagc aagattttta attcgatgcg gaatgattgt ttatgaaatt CD 1051 ggtattcCat atatggataa gaggtatcaa gctgctgaac TagcacTttt CD 1101 aagaaatacg tgtagagaga tgtgtacacc tatgCCgaga attgttgaga CD 1151 aacctgataa ttataatcag atacaacgta tgcgtgagtt gcaaccagat CD 1201 ttagccataa ctggaatggc tcatgctaat ccattagaag ctagaggaat CD 1251 taacacaaaa tggtcagttg aatttacttt tgctCaaatt catggattta CD 1301 ctaatgccaa agatgtgcTt gaacttgtga cccgtccttt acgacgtaac CD 1351 aatagtttag aagatttggg ttggacaaat ttaataaaga aagacaataa CD 1401 aataaaagta atttaa SQ SEQUENCE 472 AA; MSIQISETLT FECETGNYHT FCPISCVAWL YQKIEDSFFL VIGTKTCGYF LQNALGVMIF AEPRYAMAEL EEGDISAQLN DYEELKRLCF QIKKDRNPSV IIWIGTCTTE IIKMDLEGMA PKLEVELGVP IVVARANGLD YAFTQGEDTV LAAMAHRCPE RDLLIDENKV IQNQTIQNIF SLFSQKKKEE TLKYLELKNH PPLVLFGSLP STVASQLSLE LKRQSIQVSG WLPTQRYTDL PSLGDGVYVC GVNPFLSRTA TTLIRRRKCK LIGAPFPIGP DGTRAWIEKI SSVFGIKTKG LEEREQQVWQ SLKNYLNLVR GKSVFFMGDN LLEISLARFL IRCGMIVYEI GIPYMDKRYQ AAELALLRNT CREMCTPMPR IVEKPDNYNQ IQRMRELQPD LAITGMAHAN PLEARGINTK WSVEFTFAQI HGFTNAKDVL ELVTRPLRRN NSLEDLGWTN LIKKDNKIKV I* // ID AB086179_90 STANDARD; PRT; 291 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : chlL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55411.1 FT PROTEIN_NAME : protochlorophyllide reductase Fe protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 144372 - 145244 FT DIRECTIONS : negative FT EDITING : 20 I(aTt) -> T(aCt) FT EDITING : 24 L(tTg) -> S(tCg) FT EDITING : 49 F(tTt) -> S(tCt) FT EDITING : 58 L(tTa) -> S(tCa) FT EDITING : 86 A(gCt) -> V(gTt) FT EDITING : 124 L(tTa) -> S(tCa) FT EDITING : 133 A(gCg) -> V(gTg) FT EDITING : 134 A(gCt) -> V(gTt) FT EDITING : 135 P(cCa) -> L(cTa) FT EDITING : 156 A(gCt) -> V(gTt) FT EDITING : 158 R(Cgt) -> C(Tgt) FT EDITING : 171 P(Cca) -> S(Tca) FT EDITING : 177 L(tTa) -> S(tCa) FT EDITING : 203 L(tTa) -> S(tCa) FT EDITING : 204 P(cCc) -> L(cTc) FT EDITING : 219 L(tTa) -> S(tCa) FT CODON_START : 1 CL CDNALEN 873 NT; CD 1 gtgaaaatag cagtttatgg gaaaggtgga attggtaaat cgacaacaag CD 51 ttgtaataTt tctattgctt Tggcaaggcg tggaaaacgt gttttgcaaa CD 101 ttggatgtga tcctaaacat gatagtactt ttaccttgac tggttTtcta CD 151 atacccacca ttatagatac ttTacaatct aaagattatc attatgaaga CD 201 cgtttggcct gaagatgtaa tttataaagg ttatggaggg gtagattgcg CD 251 tagaagCtgg aggaccacct gcaggagccg gatgtggagg gtatgtcgta CD 301 ggagaaacgg ttaaattatt aaaagaatta aatgcttttt atgaatatga CD 351 tattatttta tttgatgttt Taggggatgt tgtttgtggt ggtttcgCgg CD 401 CtcCattaaa ttatgcagat tattgtatta tcattacgga taacggattt CD 451 gatgctttat ttgcagCtaa cCgtattgct gcctctgtaa gagaaaaggc CD 501 tcgtacacat Ccattacgat tagcaggttT agttggaaat cgcacatcta CD 551 aaagagatct cattaataga tatgtagaag cttgtccaat gccagtatta CD 601 gaagtatTac Ccctcattga agacattcga gtatctcgag tgaaaggaaa CD 651 aacctTattt gaaatggttg aatttcaacc atttcttaac tatgtctgtg CD 701 aattctattt gaatatagca gatcaaattt tgtctcaacc tgaaggtgtt CD 751 ataccaaaag aaattccaga tcgggaatta ttcagtttac tttccgattt CD 801 ctatttgaat ccgactaaca atgaaagaga gaataaaaat caagaaactt CD 851 tgcttgattt catgattatt tga FT EDITED CDNA CD 1 gtgaaaatag cagtttatgg gaaaggtgga attggtaaat cgacaacaag CD 51 ttgtaataCt tctattgctt Cggcaaggcg tggaaaacgt gttttgcaaa CD 101 ttggatgtga tcctaaacat gatagtactt ttaccttgac tggttCtcta CD 151 atacccacca ttatagatac ttCacaatct aaagattatc attatgaaga CD 201 cgtttggcct gaagatgtaa tttataaagg ttatggaggg gtagattgcg CD 251 tagaagTtgg aggaccacct gcaggagccg gatgtggagg gtatgtcgta CD 301 ggagaaacgg ttaaattatt aaaagaatta aatgcttttt atgaatatga CD 351 tattatttta tttgatgttt Caggggatgt tgtttgtggt ggtttcgTgg CD 401 TtcTattaaa ttatgcagat tattgtatta tcattacgga taacggattt CD 451 gatgctttat ttgcagTtaa cTgtattgct gcctctgtaa gagaaaaggc CD 501 tcgtacacat Tcattacgat tagcaggttC agttggaaat cgcacatcta CD 551 aaagagatct cattaataga tatgtagaag cttgtccaat gccagtatta CD 601 gaagtatCac Tcctcattga agacattcga gtatctcgag tgaaaggaaa CD 651 aacctCattt gaaatggttg aatttcaacc atttcttaac tatgtctgtg CD 701 aattctattt gaatatagca gatcaaattt tgtctcaacc tgaaggtgtt CD 751 ataccaaaag aaattccaga tcgggaatta ttcagtttac tttccgattt CD 801 ctatttgaat ccgactaaca atgaaagaga gaataaaaat caagaaactt CD 851 tgcttgattt catgattatt tga SQ SEQUENCE 291 AA; VKIAVYGKGG IGKSTTSCNT SIASARRGKR VLQIGCDPKH DSTFTLTGSL IPTIIDTSQS KDYHYEDVWP EDVIYKGYGG VDCVEVGGPP AGAGCGGYVV GETVKLLKEL NAFYEYDIIL FDVSGDVVCG GFVVLLNYAD YCIIITDNGF DALFAVNCIA ASVREKARTH SLRLAGSVGN RTSKRDLINR YVEACPMPVL EVSLLIEDIR VSRVKGKTSF EMVEFQPFLN YVCEFYLNIA DQILSQPEGV IPKEIPDREL FSLLSDFYLN PTNNERENKN QETLLDFMII * // ID AB086179_91 STANDARD; PRT; 156 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps7 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55412.1 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 157993 - 158460 FT DIRECTIONS : positive FT EDITING : 21 *(Tga) -> R(Cga) FT EDITING : 71 S(Tct) -> P(Cct) FT EDITING : 86 *(Taa) -> Q(Caa) FT EDITING : 108 F(tTt) -> S(tCt) FT EDITING : 124 S(tCa) -> L(tTa) FT EDITING : 127 V(gTt) -> A(gCt) FT CODON_START : 1 CL CDNALEN 468 NT; CD 1 atgtcgcgcc gaggtactac agagaaacaa atcgaaaaac ctgatccaat CD 51 ttatcgtaac Tgattggtta acttgttggt taatcgtatc ttgaggaatg CD 101 gaaaaaaatc attggcttat cgaattcttt atggagccat gagaaatatt CD 151 agacgagcaa cgaagaaaaa tccattatcc gtattacgtc aagcagtacg CD 201 tagagtaact Tctaatgtta cggtaaaagc acgacgtgta ggtggttcga CD 251 cctatTaagt ccccattgaa atagaatctt cacaaggaaa agcgcttgct CD 301 attcgttggt tattagtggc atTtaaaaaa cgtccaggtc gaaatatggc CD 351 ttttaaattg agttacgaat CaatagatgT tgctagggat aatggaaatg CD 401 ctgtgcgtaa aagagaggaa actcatagaa tggcagaggc taatagagct CD 451 ttcgctcatt ttcgctaa FT EDITED CDNA CD 1 atgtcgcgcc gaggtactac agagaaacaa atcgaaaaac ctgatccaat CD 51 ttatcgtaac Cgattggtta acttgttggt taatcgtatc ttgaggaatg CD 101 gaaaaaaatc attggcttat cgaattcttt atggagccat gagaaatatt CD 151 agacgagcaa cgaagaaaaa tccattatcc gtattacgtc aagcagtacg CD 201 tagagtaact Cctaatgtta cggtaaaagc acgacgtgta ggtggttcga CD 251 cctatCaagt ccccattgaa atagaatctt cacaaggaaa agcgcttgct CD 301 attcgttggt tattagtggc atCtaaaaaa cgtccaggtc gaaatatggc CD 351 ttttaaattg agttacgaat TaatagatgC tgctagggat aatggaaatg CD 401 ctgtgcgtaa aagagaggaa actcatagaa tggcagaggc taatagagct CD 451 ttcgctcatt ttcgctaa SQ SEQUENCE 156 AA; MSRRGTTEKQ IEKPDPIYRN RLVNLLVNRI LRNGKKSLAY RILYGAMRNI RRATKKNPLS VLRQAVRRVT PNVTVKARRV GGSTYQVPIE IESSQGKALA IRWLLVASKK RPGRNMAFKL SYELIDAARD NGNAVRKREE THRMAEANRA FAHFR* // ID AB086179_92 STANDARD; PRT; 501 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55413.1 FT PROTEIN_NAME : NADH dehydrogenase ND2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 242/0 FT EDITING : 89 P(Ccg) -> S(Tcg) FT EDITING : 120 T(aCa) -> I(aTa) FT EDITING : 145 F(tTc) -> S(tCc) FT EDITING : 157 *(Tga) -> R(Cga) FT EDITING : 158 F(tTc) -> S(tCc) FT EDITING : 167 P(cCt) -> L(cTt) FT EDITING : 174 P(Ccc) -> S(Tcc) FT EDITING : 180 S(tCt) -> F(tTt) FT EDITING : 197 L(Ctt) -> F(Ttt) FT EDITING : 294 S(tCt) -> F(tTt) FT EDITING : 310 L(tTg) -> S(tCg) FT EDITING : 335 H(Cac) -> Y(Tac) FT EDITING : 341 L(Ctt) -> F(Ttt) FT EDITING : 368 S(tCa) -> L(tTa) FT EDITING : 373 L(cTt) -> P(cCt) FT EDITING : 379 P(cCt) -> L(cTt) FT EDITING : 399 P(cCt) -> L(cTt) FT EDITING : 402 S(tCt) -> F(tTt) FT EDITING : 454 L(tTg) -> S(tCg) FT EDITING : 476 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 atgaaattag attttggttc atttttatca gatggaagta gtattttacc CD 51 agaatgtatt ttaatttcta gtttaattat cattctattg atagatctaa CD 101 cctctgaaaa aaagacatat tggttatatt tcatttcatt aacaagtttg CD 151 atcataagta taactgtcct gttatttcaa ttaaaggaag aacctatttt CD 201 tagtttctca ggcagttttc aaacagacgg ttttaatgga atattccgaa CD 251 tctctattgc atttCcgtca cttctatgta ttcccttatc tatggaatat CD 301 atgaaatgta caaaaatggc gattactgaa tctttaattt ttttgttaac CD 351 agctactaCa ggaggaatgt ttttatgcgg tgctaatgat ttaataataa CD 401 tatttattac tctagaatgt ttaagtttat cctTctattt attatccgga CD 451 tatactaaga aagatgtaTg atTcaatgaa gctgctatga agtatttacC CD 501 tatgggtgga gcaagttctC ccattctggc ttatggttCt tcatggttat CD 551 acggtttatc tggggggaaa atccaacttc aagagattCt taatggtctt CD 601 ataaacacac aaatgtataa ctctacaagt atttcgatcg tgcttatatt CD 651 tattattgca ggaatcgcat tcaaactttc tttagtacct tttcatcaat CD 701 ggactcctga tgtatatgaa ggagccccta cctcagtcat tgctttcttt CD 751 tctgttactt caaaaatagc cggtttagct ttagctacta gaatcttcaa CD 801 cacagttttt ttttcatcac tgaacgagtg gcatctaatt ctagaaataa CD 851 tagctattct aagtatgatc ttaggtaatt Ctattgctat aacgcaaaca CD 901 agtatgaaac gtatgcttgc atattcttTg ataagtcaaa ttggatattt CD 951 tatgattgga gtaattgcgg gagactctaa tgggtatgca agcatgataa CD 1001 ctCacatgct attctacatt Cttatgaatc taggaacttt tgcttgtatt CD 1051 acattattcg gtttacgcac tggaacggac aacattcggg attatgcagg CD 1101 gtCatataaa aaagatcTtc tattggcatc ttttcCtgct ttatctttat CD 1151 tatccttagg aggtattcct cccttagctg ggtttttcgg aaaacCttac CD 1201 ctctCttggt gtgggtggaa agcgggtcta tacttatcag tctccgtagg CD 1251 acttttcaca agtgtaatct ctatatatta ctatttacga atagtcaaat CD 1301 tgattgtgac taaggaaaac gaagaaacaa cttcttatat tcggaagtat CD 1351 aaaacttctt Tgaattattt agtatcaaaa agtcctattg aatttagtat CD 1401 cattatatgt gtaataggat caacctCttc gggaatagtg attaaccccg CD 1451 tcattgctat tgttgaaaaa acaatatctc taagtagttt tattaataac CD 1501 taa FT EDITED CDNA CD 1 atgaaattag attttggttc atttttatca gatggaagta gtattttacc CD 51 agaatgtatt ttaatttcta gtttaattat cattctattg atagatctaa CD 101 cctctgaaaa aaagacatat tggttatatt tcatttcatt aacaagtttg CD 151 atcataagta taactgtcct gttatttcaa ttaaaggaag aacctatttt CD 201 tagtttctca ggcagttttc aaacagacgg ttttaatgga atattccgaa CD 251 tctctattgc atttTcgtca cttctatgta ttcccttatc tatggaatat CD 301 atgaaatgta caaaaatggc gattactgaa tctttaattt ttttgttaac CD 351 agctactaTa ggaggaatgt ttttatgcgg tgctaatgat ttaataataa CD 401 tatttattac tctagaatgt ttaagtttat cctCctattt attatccgga CD 451 tatactaaga aagatgtaCg atCcaatgaa gctgctatga agtatttacT CD 501 tatgggtgga gcaagttctT ccattctggc ttatggttTt tcatggttat CD 551 acggtttatc tggggggaaa atccaacttc aagagattTt taatggtctt CD 601 ataaacacac aaatgtataa ctctacaagt atttcgatcg tgcttatatt CD 651 tattattgca ggaatcgcat tcaaactttc tttagtacct tttcatcaat CD 701 ggactcctga tgtatatgaa ggagccccta cctcagtcat tgctttcttt CD 751 tctgttactt caaaaatagc cggtttagct ttagctacta gaatcttcaa CD 801 cacagttttt ttttcatcac tgaacgagtg gcatctaatt ctagaaataa CD 851 tagctattct aagtatgatc ttaggtaatt Ttattgctat aacgcaaaca CD 901 agtatgaaac gtatgcttgc atattcttCg ataagtcaaa ttggatattt CD 951 tatgattgga gtaattgcgg gagactctaa tgggtatgca agcatgataa CD 1001 ctTacatgct attctacatt Tttatgaatc taggaacttt tgcttgtatt CD 1051 acattattcg gtttacgcac tggaacggac aacattcggg attatgcagg CD 1101 gtTatataaa aaagatcCtc tattggcatc ttttcTtgct ttatctttat CD 1151 tatccttagg aggtattcct cccttagctg ggtttttcgg aaaacTttac CD 1201 ctctTttggt gtgggtggaa agcgggtcta tacttatcag tctccgtagg CD 1251 acttttcaca agtgtaatct ctatatatta ctatttacga atagtcaaat CD 1301 tgattgtgac taaggaaaac gaagaaacaa cttcttatat tcggaagtat CD 1351 aaaacttctt Cgaattattt agtatcaaaa agtcctattg aatttagtat CD 1401 cattatatgt gtaataggat caacctTttc gggaatagtg attaaccccg CD 1451 tcattgctat tgttgaaaaa acaatatctc taagtagttt tattaataac CD 1501 taa SQ SEQUENCE 501 AA; MKLDFGSFLS DGSSILPECI LISSLIIILL IDLTSEKKTY WLYFISLTSL IISITVLLFQ LKEEPIFSFS GSFQTDGFNG IFRISIAFSS LLCIPLSMEY MKCTKMAITE SLIFLLTATI GGMFLCGAND LIIIFITLEC LSLSSYLLSG YTKKDVRSNE AAMKYLLMGG ASSSILAYGF SWLYGLSGGK IQLQEIFNGL INTQMYNSTS ISIVLIFIIA GIAFKLSLVP FHQWTPDVYE GAPTSVIAFF SVTSKIAGLA LATRIFNTVF FSSLNEWHLI LEIIAILSMI LGNFIAITQT SMKRMLAYSS ISQIGYFMIG VIAGDSNGYA SMITYMLFYI FMNLGTFACI TLFGLRTGTD NIRDYAGLYK KDPLLASFLA LSLLSLGGIP PLAGFFGKLY LFWCGWKAGL YLSVSVGLFT SVISIYYYLR IVKLIVTKEN EETTSYIRKY KTSSNYLVSK SPIEFSIIIC VIGSTFSGIV INPVIAIVEK TISLSSFINN * // ID AB098210_1 STANDARD; PRT; 223 AA. AC AB098210; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rps2 gene for ribosomal protein S2, partial OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : rps2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77547.1 FT PROTEIN_NAME : ribosomal protein S2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 667 FT DIRECTIONS : positive FT EDITING : 45 T(aCa) -> I(aTa) FT EDITING : 83 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 667 NT; CD 1 atgacaagaa gatattggaa cataaatttg gaagagatga tggaggcagg CD 51 agttcatttt ggtcatggta ctaggaaatg gaatcctaaa atggcgcctt CD 101 atatttctgc aaagcgtaag ggtattcata ttaCaaatct tactagaact CD 151 gctcgttttt tatcagaagc ttgtgattta gtttttgacg cagcaagtag CD 201 gggaaaacaa ttcttaattg ttggtaccaa aaataaagca gctgattCag CD 251 tagagtgggc tgcaataagg gcccggtgtc attatgttaa taaaaaatgg CD 301 cttggcggta tgttaacgaa ttggtccact accgaaacaa gacttcataa CD 351 gttcagggac ttgagaatgg aacaaaaaac agggagactc aaccgtctcc CD 401 cgaaaagaga tgctgctatg ttgaaaagac aattatctcg cttgcaaaca CD 451 tatctgggcg ggattaaata tatgacaggg gtacccgata ttgtaatcat CD 501 cgttgatcag cacgaagaat atacggccct gcgagagtgt attactttag CD 551 gaattccaac aatttgttta accgatacaa attgtgaccc cgatctcgca CD 601 gatatttcaa ttccagcgaa tgatgacgcc atatcctcaa tccgattaat CD 651 tcttaacaaa ttagtat FT EDITED CDNA CD 1 atgacaagaa gatattggaa cataaatttg gaagagatga tggaggcagg CD 51 agttcatttt ggtcatggta ctaggaaatg gaatcctaaa atggcgcctt CD 101 atatttctgc aaagcgtaag ggtattcata ttaTaaatct tactagaact CD 151 gctcgttttt tatcagaagc ttgtgattta gtttttgacg cagcaagtag CD 201 gggaaaacaa ttcttaattg ttggtaccaa aaataaagca gctgattTag CD 251 tagagtgggc tgcaataagg gcccggtgtc attatgttaa taaaaaatgg CD 301 cttggcggta tgttaacgaa ttggtccact accgaaacaa gacttcataa CD 351 gttcagggac ttgagaatgg aacaaaaaac agggagactc aaccgtctcc CD 401 cgaaaagaga tgctgctatg ttgaaaagac aattatctcg cttgcaaaca CD 451 tatctgggcg ggattaaata tatgacaggg gtacccgata ttgtaatcat CD 501 cgttgatcag cacgaagaat atacggccct gcgagagtgt attactttag CD 551 gaattccaac aatttgttta accgatacaa attgtgaccc cgatctcgca CD 601 gatatttcaa ttccagcgaa tgatgacgcc atatcctcaa tccgattaat CD 651 tcttaacaaa ttagtat SQ SEQUENCE 223 AA; MTRRYWNINL EEMMEAGVHF GHGTRKWNPK MAPYISAKRK GIHIINLTRT ARFLSEACDL VFDAASRGKQ FLIVGTKNKA ADLVEWAAIR ARCHYVNKKW LGGMLTNWST TETRLHKFRD LRMEQKTGRL NRLPKRDAAM LKRQLSRLQT YLGGIKYMTG VPDIVIIVDQ HEEYTALREC ITLGIPTICL TDTNCDPDLA DISIPANDDA ISSIRLILNK LVX // ID AB098211_1 STANDARD; PRT; 101 AA. AC AB098211; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rps14 gene for ribosomal protein S14, complete OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT Full length CDS FT GENE : rps14 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77548.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 303 FT DIRECTIONS : positive FT EDITING : 27 S(tCa) -> L(tTa) FT EDITING : 50 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atggcaagga aaagtttgat tcagagggag aagaagaggc aaaaattgga CD 51 acagaaatat cattcgattc gtcgatcctC aaagaaagaa ataagcaagg CD 101 ttccgtcgtt gagtgacaaa tgggaaattt atggaaagtt acaatcccCa CD 151 ccacggaata gtgcacctac acgccttcat cgacgttgtt ttttgaccgg CD 201 aaggccgaga gctaactatc gagactttgg actatccgga cacatacttc CD 251 gtgaaatggt tcatgcatgt ttgttgccag gagcaacaag atcaagttgg CD 301 taa FT EDITED CDNA CD 1 atggcaagga aaagtttgat tcagagggag aagaagaggc aaaaattgga CD 51 acagaaatat cattcgattc gtcgatcctT aaagaaagaa ataagcaagg CD 101 ttccgtcgtt gagtgacaaa tgggaaattt atggaaagtt acaatcccTa CD 151 ccacggaata gtgcacctac acgccttcat cgacgttgtt ttttgaccgg CD 201 aaggccgaga gctaactatc gagactttgg actatccgga cacatacttc CD 251 gtgaaatggt tcatgcatgt ttgttgccag gagcaacaag atcaagttgg CD 301 taa SQ SEQUENCE 101 AA; MARKSLIQRE KKRQKLEQKY HSIRRSLKKE ISKVPSLSDK WEIYGKLQSL PRNSAPTRLH RRCFLTGRPR ANYRDFGLSG HILREMVHAC LLPGATRSSW * // ID AB098212_1 STANDARD; PRT; 112 AA. AC AB098212; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rpoC2 gene for RNA polymerase beta'' subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoC2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77549.1 FT PROTEIN_NAME : RNA polymerase beta'' subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 336 FT DIRECTIONS : positive FT EDITING : 47 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 336 NT; CD 1 cgaatctctt tggttaataa aatccaacag gtttatcgct cccagggggt CD 51 gcagattcat aataggcatc tagaaattat tgtacgtcaa ataacatcaa CD 101 aagtgttggt ttcagaagat ggaatgtcta atgttttttC acccggagaa CD 151 cttattggat tgttgcgagc agaacgaatg gggcgcgctt tggaagaagc CD 201 gatctgttac cgagtcgtct tattgggaat aacaagagca tctctcaata CD 251 ctcaaagttt catatctgaa gcgagttttc aagaaactgc tcgagtttta CD 301 gcaaaagcgg ctctccgggg tcgtatcgat tggttg FT EDITED CDNA CD 1 cgaatctctt tggttaataa aatccaacag gtttatcgct cccagggggt CD 51 gcagattcat aataggcatc tagaaattat tgtacgtcaa ataacatcaa CD 101 aagtgttggt ttcagaagat ggaatgtcta atgttttttT acccggagaa CD 151 cttattggat tgttgcgagc agaacgaatg gggcgcgctt tggaagaagc CD 201 gatctgttac cgagtcgtct tattgggaat aacaagagca tctctcaata CD 251 ctcaaagttt catatctgaa gcgagttttc aagaaactgc tcgagtttta CD 301 gcaaaagcgg ctctccgggg tcgtatcgat tggttg SQ SEQUENCE 112 AA; RISLVNKIQQ VYRSQGVQIH NRHLEIIVRQ ITSKVLVSED GMSNVFLPGE LIGLLRAERM GRALEEAICY RVVLLGITRA SLNTQSFISE ASFQETARVL AKAALRGRID WL // ID AB098213_1 STANDARD; PRT; 150 AA. AC AB098213; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rpoC1 gene for RNA polymerase beta' subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoC1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77550.1 FT PROTEIN_NAME : RNA polymerase beta' subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 450 FT DIRECTIONS : positive FT EDITING : 21 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 450 NT; CD 1 atgaataata atttttcttc tatgatcgat cgatataaac atcaacagct CD 51 ccgaattgga tCagtttctc ctcaacaaat aagtgcttgg gccactaaaa CD 101 tcctgcctaa tggagagata gttggagagg taacaaaacc ctatactttt CD 151 cattacaaaa ctaacaaacc ggaaaaagat ggattatttt gtgaaagaat CD 201 ttttggtcct ataaaaagcg gaatttgtgc ttgtggaaat tatcgagtaa CD 251 tcggagatga aaaagaagac ccgaaatttt gtgaacaatg cggggtcgaa CD 301 tttgttgatt ctcggatacg aaggtatcaa atgggctata tcaaactcgc CD 351 atgcccagta acccatgtgt ggtatttaaa acgtcttcct agttatattg CD 401 cgaatctttt agataaacct cttaaagaat tagaaggcct agtatactgc FT EDITED CDNA CD 1 atgaataata atttttcttc tatgatcgat cgatataaac atcaacagct CD 51 ccgaattgga tTagtttctc ctcaacaaat aagtgcttgg gccactaaaa CD 101 tcctgcctaa tggagagata gttggagagg taacaaaacc ctatactttt CD 151 cattacaaaa ctaacaaacc ggaaaaagat ggattatttt gtgaaagaat CD 201 ttttggtcct ataaaaagcg gaatttgtgc ttgtggaaat tatcgagtaa CD 251 tcggagatga aaaagaagac ccgaaatttt gtgaacaatg cggggtcgaa CD 301 tttgttgatt ctcggatacg aaggtatcaa atgggctata tcaaactcgc CD 351 atgcccagta acccatgtgt ggtatttaaa acgtcttcct agttatattg CD 401 cgaatctttt agataaacct cttaaagaat tagaaggcct agtatactgc SQ SEQUENCE 150 AA; MNNNFSSMID RYKHQQLRIG LVSPQQISAW ATKILPNGEI VGEVTKPYTF HYKTNKPEKD GLFCERIFGP IKSGICACGN YRVIGDEKED PKFCEQCGVE FVDSRIRRYQ MGYIKLACPV THVWYLKRLP SYIANLLDKP LKELEGLVYC // ID AB098214_1 STANDARD; PRT; 143 AA. AC AB098214; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rpoB gene for RNA polymerase beta subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77551.1 FT PROTEIN_NAME : RNA polymerase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 429 FT DIRECTIONS : positive FT EDITING : 94 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 429 NT; CD 1 gattcggggg ctcttgctat agccgaacgc gagggaaggg tcgtttatac CD 51 caatactgac aagattcttt tagcaggtaa tggagatatt ctaagcattc CD 101 cattagttat atatcaacgt tccaataaaa atacttgtat gcatcaaaaa CD 151 ctccaggttc ctcggggtaa atgcattaaa aagggacaaa ttttagcgga CD 201 tggtgctgct acggttggtg gcgaacttgc tttggggaaa aacgtattag CD 251 tagcttatat gccgtgggag ggttacaatt Ctgaagatgc agtacttatt CD 301 agcgagcgtt tggtatatga agatatttat acttcttttc acatacggaa CD 351 atatgaaatt cagactcatg tgacaagcca aggccctgaa aaagtaacta CD 401 atgaaatacc gcatttagaa gcccattta FT EDITED CDNA CD 1 gattcggggg ctcttgctat agccgaacgc gagggaaggg tcgtttatac CD 51 caatactgac aagattcttt tagcaggtaa tggagatatt ctaagcattc CD 101 cattagttat atatcaacgt tccaataaaa atacttgtat gcatcaaaaa CD 151 ctccaggttc ctcggggtaa atgcattaaa aagggacaaa ttttagcgga CD 201 tggtgctgct acggttggtg gcgaacttgc tttggggaaa aacgtattag CD 251 tagcttatat gccgtgggag ggttacaatt Ttgaagatgc agtacttatt CD 301 agcgagcgtt tggtatatga agatatttat acttcttttc acatacggaa CD 351 atatgaaatt cagactcatg tgacaagcca aggccctgaa aaagtaacta CD 401 atgaaatacc gcatttagaa gcccattta SQ SEQUENCE 143 AA; DSGALAIAER EGRVVYTNTD KILLAGNGDI LSIPLVIYQR SNKNTCMHQK LQVPRGKCIK KGQILADGAA TVGGELALGK NVLVAYMPWE GYNFEDAVLI SERLVYEDIY TSFHIRKYEI QTHVTSQGPE KVTNEIPHLE AHL // ID AB098215_1 STANDARD; PRT; 248 AA. AC AB098215; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rpoB gene for RNA polymerase beta subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77552.1 FT PROTEIN_NAME : RNA polymerase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 744 FT DIRECTIONS : positive FT EDITING : 99 S(tCt) -> F(tTt) FT EDITING : 144 S(tCa) -> L(tTa) FT EDITING : 170 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 744 NT; CD 1 tttaatcaga tacaatttga aggattttgt aggttcattg atcaaggttt CD 51 gacggaagaa ctttataagt ttccaaaaat tgaagataca gatcaagaaa CD 101 ttgaatttca attatttgtg gaaacatatc aattggtcga acccttgata CD 151 aaggaaagag atgctgtgta tgaatcactc acatattctt ctgaattata CD 201 tgtatccgcg ggattaattt ggaaaaacag tagggatatg caagaacaaa CD 251 caatttttat cggaaacatt cctctaatga attccctggg aacttCtata CD 301 gtcaatggaa tatatagaat tgtgatcaat caaatattgc aaagtcccgg CD 351 tatttattac cgatcagaat tggaccataa cggaatttcg gtctataccg CD 401 gcaccataat atcagattgg ggaggaagat Cagaattaga aattgataga CD 451 aaagcaagga tatgggctcg tgtaagtagg aaacaaaaaa tatctattct CD 501 agttctatCa tcagctatgg gtttgaatct aagagaaatt ctagagaatg CD 551 tttgctatcc tgaaattttt ttgtcttttc tgagtgataa ggagagaaaa CD 601 aaaattgggt caaaagaaaa tgccattttg gagttttatc aacaatttgc CD 651 ttgtgtaggt ggcgatccgg tattttctga atccttatgt aaggaattac CD 701 aaaagaaatt ctttcaacaa agatgtgaat taggaaggat tggt FT EDITED CDNA CD 1 tttaatcaga tacaatttga aggattttgt aggttcattg atcaaggttt CD 51 gacggaagaa ctttataagt ttccaaaaat tgaagataca gatcaagaaa CD 101 ttgaatttca attatttgtg gaaacatatc aattggtcga acccttgata CD 151 aaggaaagag atgctgtgta tgaatcactc acatattctt ctgaattata CD 201 tgtatccgcg ggattaattt ggaaaaacag tagggatatg caagaacaaa CD 251 caatttttat cggaaacatt cctctaatga attccctggg aacttTtata CD 301 gtcaatggaa tatatagaat tgtgatcaat caaatattgc aaagtcccgg CD 351 tatttattac cgatcagaat tggaccataa cggaatttcg gtctataccg CD 401 gcaccataat atcagattgg ggaggaagat Tagaattaga aattgataga CD 451 aaagcaagga tatgggctcg tgtaagtagg aaacaaaaaa tatctattct CD 501 agttctatTa tcagctatgg gtttgaatct aagagaaatt ctagagaatg CD 551 tttgctatcc tgaaattttt ttgtcttttc tgagtgataa ggagagaaaa CD 601 aaaattgggt caaaagaaaa tgccattttg gagttttatc aacaatttgc CD 651 ttgtgtaggt ggcgatccgg tattttctga atccttatgt aaggaattac CD 701 aaaagaaatt ctttcaacaa agatgtgaat taggaaggat tggt SQ SEQUENCE 248 AA; FNQIQFEGFC RFIDQGLTEE LYKFPKIEDT DQEIEFQLFV ETYQLVEPLI KERDAVYESL TYSSELYVSA GLIWKNSRDM QEQTIFIGNI PLMNSLGTFI VNGIYRIVIN QILQSPGIYY RSELDHNGIS VYTGTIISDW GGRLELEIDR KARIWARVSR KQKISILVLL SAMGLNLREI LENVCYPEIF LSFLSDKERK KIGSKENAIL EFYQQFACVG GDPVFSESLC KELQKKFFQQ RCELGRIG // ID AB098216_1 STANDARD; PRT; 80 AA. AC AB098216; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rpoA gene for RNA polymerase alpha subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77553.1 FT PROTEIN_NAME : RNA polymerase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 239 FT DIRECTIONS : positive FT EDITING : 34 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 239 NT; CD 1 cacacggttc ctttatcccc ttttaccttt catgataaat tggctaaact CD 51 cataaaaaac aaaaaaaaaa tagcattgaa atcgattttt attgaccaat CD 101 Cagaattgcc ttccaggatc tataattgcc tcaaaatgtc caatatatat CD 151 acattgttgg accttttgaa taacagccaa gaagatctta tgaaaattga CD 201 acattttcgt agcgaagatg taaaacggat attgggcat FT EDITED CDNA CD 1 cacacggttc ctttatcccc ttttaccttt catgataaat tggctaaact CD 51 cataaaaaac aaaaaaaaaa tagcattgaa atcgattttt attgaccaat CD 101 Tagaattgcc ttccaggatc tataattgcc tcaaaatgtc caatatatat CD 151 acattgttgg accttttgaa taacagccaa gaagatctta tgaaaattga CD 201 acattttcgt agcgaagatg taaaacggat attgggcat SQ SEQUENCE 80 AA; HTVPLSPFTF HDKLAKLIKN KKKIALKSIF IDQLELPSRI YNCLKMSNIY TLLDLLNNSQ EDLMKIEHFR SEDVKRILGX // ID AB098217_1 STANDARD; PRT; 76 AA. AC AB098217; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rpl20 gene for ribosomal protein L20, partial OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : rpl20 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77554.1 FT PROTEIN_NAME : ribosomal protein L20 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 228 FT DIRECTIONS : positive FT EDITING : 50 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 228 NT; CD 1 aagagagatt ttcgtcgttt gtggatcact cggataaacg cagtaattcg CD 51 cgaaagggga gtatcctata gttatagtag attaatacac gatctgtaca CD 101 agagacagtt gcttcttaac cgtaaaatac ttgcacaaat agctatatCa CD 151 aataggaatt gtctttatat gatttcgaac gaaatcataa aggaagtaga CD 201 ttggaaagaa tccaccagaa taatttaa FT EDITED CDNA CD 1 aagagagatt ttcgtcgttt gtggatcact cggataaacg cagtaattcg CD 51 cgaaagggga gtatcctata gttatagtag attaatacac gatctgtaca CD 101 agagacagtt gcttcttaac cgtaaaatac ttgcacaaat agctatatTa CD 151 aataggaatt gtctttatat gatttcgaac gaaatcataa aggaagtaga CD 201 ttggaaagaa tccaccagaa taatttaa SQ SEQUENCE 76 AA; KRDFRRLWIT RINAVIRERG VSYSYSRLIH DLYKRQLLLN RKILAQIAIL NRNCLYMISN EIIKEVDWKE STRII* // ID AB098218_2 STANDARD; PRT; 39 AA. AC AB098218; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris psbF, psbL genes for PSII cytochrome b559 4kDa OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77556.1 FT PROTEIN_NAME : PSII L-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 144 - 260 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AB098219_1 STANDARD; PRT; 82 AA. AC AB098219; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris psbE gene for PSII cytochrome b559 8kDa OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : psbE FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77557.1 FT PROTEIN_NAME : PSII cytochrome b559 8kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 131 - 374 FT DIRECTIONS : positive FT EDITING : 72 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 244 NT; CD 1 atgtctggaa gcacaggaga acgttcgttt gctgatatta ttaccagtat CD 51 tcgatactgg gtcattcata gcattactat accttcccta ttcattgcgg CD 101 gttggttatt tgtcagcacc ggtttagctt acgatgtgtt tggaagccct CD 151 cggccaaacg agtattttac agagagccga caaggaattc cattaataac CD 201 tggccgtttt gatCctttgg aacaactcga tgaatttagt agat FT EDITED CDNA CD 1 atgtctggaa gcacaggaga acgttcgttt gctgatatta ttaccagtat CD 51 tcgatactgg gtcattcata gcattactat accttcccta ttcattgcgg CD 101 gttggttatt tgtcagcacc ggtttagctt acgatgtgtt tggaagccct CD 151 cggccaaacg agtattttac agagagccga caaggaattc cattaataac CD 201 tggccgtttt gatTctttgg aacaactcga tgaatttagt agat SQ SEQUENCE 82 AA; MSGSTGERSF ADIITSIRYW VIHSITIPSL FIAGWLFVST GLAYDVFGSP RPNEYFTESR QGIPLITGRF DSLEQLDEFS RX // ID AB098220_1 STANDARD; PRT; 68 AA. AC AB098220; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris petB gene for cytochrom b6, partial cds. OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : petB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77558.1 FT PROTEIN_NAME : cytochrom b6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 206 FT DIRECTIONS : positive FT EDITING : 56 P(cCa) -> L(cTa) FT CODON_START : 3 CL CDNALEN 206 NT; CD 1 tgaaaatagt aacaggtgtc cctgacgcta ttcctgtaat aggatcaccc CD 51 ttggtcgaat tattgcgcgg aagcgctagt gtgggacaat ctactttgac CD 101 ccgtttttat agtttacaca cttttgtatt gccgcttctt actgccgtat CD 151 ttatgttaat gcactttcCa atgatacgta aacaaggtat ttctgggcct CD 201 ttatag FT EDITED CDNA CD 1 tgaaaatagt aacaggtgtc cctgacgcta ttcctgtaat aggatcaccc CD 51 ttggtcgaat tattgcgcgg aagcgctagt gtgggacaat ctactttgac CD 101 ccgtttttat agtttacaca cttttgtatt gccgcttctt actgccgtat CD 151 ttatgttaat gcactttcTa atgatacgta aacaaggtat ttctgggcct CD 201 ttatag SQ SEQUENCE 68 AA; KIVTGVPDAI PVIGSPLVEL LRGSASVGQS TLTRFYSLHT FVLPLLTAVF MLMHFLMIRK QGISGPL* // ID AB098221_1 STANDARD; PRT; 122 AA. AC AB098221; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhF gene for NADH dehydrogenase ND5 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhF FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77559.1 FT PROTEIN_NAME : NADH dehydrogenase ND5 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 364 FT DIRECTIONS : positive FT EDITING : 53 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 364 NT; CD 1 gttttattgt taagcatagt catggttttt tcaatctacc tgtctattca CD 51 gcaaataaat agcagttctt tttatcaata tgtatggtct tggatcatca CD 101 ataatgattt ttctttagac ttcggatact tgatcgaccc acttacttct CD 151 attatgtCaa tattaatcac tacggttgga attatggttc ttatttatag CD 201 tgataattat atggctcatg atcaaggcta tttgagattt tttgcttata CD 251 tgagtttttt cagtacttcc atgttgggat tagttactag ttcgaatttg CD 301 atacaaattt atattttttg ggaattggtt gggctgtgtt cctatctatt CD 351 aataggattt tggt FT EDITED CDNA CD 1 gttttattgt taagcatagt catggttttt tcaatctacc tgtctattca CD 51 gcaaataaat agcagttctt tttatcaata tgtatggtct tggatcatca CD 101 ataatgattt ttctttagac ttcggatact tgatcgaccc acttacttct CD 151 attatgtTaa tattaatcac tacggttgga attatggttc ttatttatag CD 201 tgataattat atggctcatg atcaaggcta tttgagattt tttgcttata CD 251 tgagtttttt cagtacttcc atgttgggat tagttactag ttcgaatttg CD 301 atacaaattt atattttttg ggaattggtt gggctgtgtt cctatctatt CD 351 aataggattt tggt SQ SEQUENCE 122 AA; VLLLSIVMVF SIYLSIQQIN SSSFYQYVWS WIINNDFSLD FGYLIDPLTS IMLILITTVG IMVLIYSDNY MAHDQGYLRF FAYMSFFSTS MLGLVTSSNL IQIYIFWELV GLCSYLLIGF WX // ID AB098222_1 STANDARD; PRT; 117 AA. AC AB098222; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhD gene for NADH dehydrogenase ND4 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77560.1 FT PROTEIN_NAME : NADH dehydrogenase ND4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 349 FT DIRECTIONS : positive FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 68 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 349 NT; CD 1 aagaaacgtc tgtactcagc tacaaaattt attttgtaca cggcgggggg CD 51 ttctgttttt ctcttaatgg gagttttggg tcttgcttta tatggttcta CD 101 atgaaccaac attaaatttt gaaacatCag ttaatcagtc atatcctgtg CD 151 gttttagaaa taatattcta tattggattt tttattgctt ttgctgtcaa CD 201 atCgcccatt atccccctac acacatggtt accagatacc catggagaag CD 251 cacattacag tacttgtatg cttctagccg gaattttatt aaaaatggga CD 301 gcgtatggat taattcgaat caatatggaa ttattacctc atgcccatt FT EDITED CDNA CD 1 aagaaacgtc tgtactcagc tacaaaattt attttgtaca cggcgggggg CD 51 ttctgttttt ctcttaatgg gagttttggg tcttgcttta tatggttcta CD 101 atgaaccaac attaaatttt gaaacatTag ttaatcagtc atatcctgtg CD 151 gttttagaaa taatattcta tattggattt tttattgctt ttgctgtcaa CD 201 atTgcccatt atccccctac acacatggtt accagatacc catggagaag CD 251 cacattacag tacttgtatg cttctagccg gaattttatt aaaaatggga CD 301 gcgtatggat taattcgaat caatatggaa ttattacctc atgcccatt SQ SEQUENCE 117 AA; KKRLYSATKF ILYTAGGSVF LLMGVLGLAL YGSNEPTLNF ETLVNQSYPV VLEIIFYIGF FIAFAVKLPI IPLHTWLPDT HGEAHYSTCM LLAGILLKMG AYGLIRINME LLPHAHX // ID AB098223_2 STANDARD; PRT; 152 AA. AC AB098223; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris psaC, ndhD genes for PSI 9 kDa protein, NADH OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77562.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 254 - 707 FT DIRECTIONS : positive FT EDITING : 1 T(aCt) -> I(aTt) FT EDITING : 129 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 454 NT; CD 1 aCtacgaatt attttccttg gttaacaata attgtagttt ttccaatatt CD 51 tgcgggttcc ttaattttct ttcttcccca taaaggaaat agggtaatta CD 101 ggtggtatac gatatgtata tgtattttag aactccttct aacgacttat CD 151 gcattttgtt atcatttcca atcggatgat ccattaatcc aactagtgga CD 201 ggattataaa tggatcaatt tttttgattt ccattggaga ttaggaatag CD 251 atggactttc tataggaccc attttattaa caggatttat cactacttta CD 301 gctactttag cggcttggcc agttactcga gattctcgat tattccattt CD 351 tctcatgtta gcaatgtaca gtggtcaaat tggatCattt tcgtctcggg CD 401 accttttact ttttttcatc atgtgggagt tagaattaat tcctgtttat CD 451 ctac FT EDITED CDNA CD 1 aTtacgaatt attttccttg gttaacaata attgtagttt ttccaatatt CD 51 tgcgggttcc ttaattttct ttcttcccca taaaggaaat agggtaatta CD 101 ggtggtatac gatatgtata tgtattttag aactccttct aacgacttat CD 151 gcattttgtt atcatttcca atcggatgat ccattaatcc aactagtgga CD 201 ggattataaa tggatcaatt tttttgattt ccattggaga ttaggaatag CD 251 atggactttc tataggaccc attttattaa caggatttat cactacttta CD 301 gctactttag cggcttggcc agttactcga gattctcgat tattccattt CD 351 tctcatgtta gcaatgtaca gtggtcaaat tggatTattt tcgtctcggg CD 401 accttttact ttttttcatc atgtgggagt tagaattaat tcctgtttat CD 451 ctac SQ SEQUENCE 152 AA; ITNYFPWLTI IVVFPIFAGS LIFFLPHKGN RVIRWYTICI CILELLLTTY AFCYHFQSDD PLIQLVEDYK WINFFDFHWR LGIDGLSIGP ILLTGFITTL ATLAAWPVTR DSRLFHFLML AMYSGQIGLF SSRDLLLFFI MWELELIPVY LX // ID AB098224_1 STANDARD; PRT; 232 AA. AC AB098224; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhB gene for NADH dehydrogenase ND2 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77563.1 FT PROTEIN_NAME : NADH dehydrogenase ND2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 694 FT DIRECTIONS : positive FT EDITING : 23 S(tCa) -> L(tTa) FT EDITING : 129 P(cCa) -> L(cTa) FT EDITING : 169 H(Cat) -> Y(Tat) FT EDITING : 177 S(tCa) -> L(tTa) FT EDITING : 219 P(cCa) -> L(cTa) FT EDITING : 222 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 694 NT; CD 1 gatggaagtt tgattttccc agaatgtatc ctaatttttg gcctaattct CD 51 tcttctgatg atcgattCaa cctctgatca aaaagatata ccttggttat CD 101 atttcatctc ttcaacaagt ttagtaatga gcataacggc cctattgttc CD 151 cgatggagag aagaacctat gattagcttt tcgggaaatt tccaaacgaa CD 201 caatttcaac gaaatctttc aatttcttat tttactatgt tcaactctat CD 251 gtattcctct atccgtagag tacattgaat gtacagaaat ggctataaca CD 301 gagtttctct tattcgtatt aacagctact ctagggggaa tgtttttatg CD 351 cggtgctaac gatttaataa ctatctttgt agcccCagaa tgtttcagtt CD 401 tatgctccta cctattatct ggatatacca agaaagatgt acggtctaat CD 451 gaggctacta tgaaatattt actcatgggt ggggcaagct cttctattct CD 501 ggttCatggt ttctcttggc tatatggttC atccggggga gagattgagc CD 551 ttcaagaaat agtaaacggt cttatcaata cacaaatgta taactcccca CD 601 ggaatttcaa ttgcgctcat attcattacc gtaggaattg ggttcaagct CD 651 ttcccCagcc ccttCtcatc aatggactcc tgacgtatac gaag FT EDITED CDNA CD 1 gatggaagtt tgattttccc agaatgtatc ctaatttttg gcctaattct CD 51 tcttctgatg atcgattTaa cctctgatca aaaagatata ccttggttat CD 101 atttcatctc ttcaacaagt ttagtaatga gcataacggc cctattgttc CD 151 cgatggagag aagaacctat gattagcttt tcgggaaatt tccaaacgaa CD 201 caatttcaac gaaatctttc aatttcttat tttactatgt tcaactctat CD 251 gtattcctct atccgtagag tacattgaat gtacagaaat ggctataaca CD 301 gagtttctct tattcgtatt aacagctact ctagggggaa tgtttttatg CD 351 cggtgctaac gatttaataa ctatctttgt agcccTagaa tgtttcagtt CD 401 tatgctccta cctattatct ggatatacca agaaagatgt acggtctaat CD 451 gaggctacta tgaaatattt actcatgggt ggggcaagct cttctattct CD 501 ggttTatggt ttctcttggc tatatggttT atccggggga gagattgagc CD 551 ttcaagaaat agtaaacggt cttatcaata cacaaatgta taactcccca CD 601 ggaatttcaa ttgcgctcat attcattacc gtaggaattg ggttcaagct CD 651 ttcccTagcc ccttTtcatc aatggactcc tgacgtatac gaag SQ SEQUENCE 232 AA; DGSLIFPECI LIFGLILLLM IDLTSDQKDI PWLYFISSTS LVMSITALLF RWREEPMISF SGNFQTNNFN EIFQFLILLC STLCIPLSVE YIECTEMAIT EFLLFVLTAT LGGMFLCGAN DLITIFVALE CFSLCSYLLS GYTKKDVRSN EATMKYLLMG GASSSILVYG FSWLYGLSGG EIELQEIVNG LINTQMYNSP GISIALIFIT VGIGFKLSLA PFHQWTPDVY EX // ID AB098225_1 STANDARD; PRT; 75 AA. AC AB098225; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhB gene for NADH dehydrogenase ND2 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : ndhB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77564.1 FT PROTEIN_NAME : NADH dehydrogenase ND2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 225 FT DIRECTIONS : positive FT EDITING : 58 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 ctccttacaa gcgttgtttc tatctactat tatctaaaaa taataaagtt CD 51 attaatgact ggacgaaacc aagaaataac ccctcacgtg cgaaattata CD 101 gaagatcccc tttaagatca aacaattcca tcgaattgag tatgattgta CD 151 tgtgtgatag catctactat acCaggaata tcaatgaacc caattattgc CD 201 aattgctcag gatagccttt tttag FT EDITED CDNA CD 1 ctccttacaa gcgttgtttc tatctactat tatctaaaaa taataaagtt CD 51 attaatgact ggacgaaacc aagaaataac ccctcacgtg cgaaattata CD 101 gaagatcccc tttaagatca aacaattcca tcgaattgag tatgattgta CD 151 tgtgtgatag catctactat acTaggaata tcaatgaacc caattattgc CD 201 aattgctcag gatagccttt tttag SQ SEQUENCE 75 AA; LLTSVVSIYY YLKIIKLLMT GRNQEITPHV RNYRRSPLRS NNSIELSMIV CVIASTILGI SMNPIIAIAQ DSLF* // ID AB098226_1 STANDARD; PRT; 158 AA. AC AB098226; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhB gene for NADH dehydrogenase ND2 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77565.1 FT PROTEIN_NAME : NADH dehydrogenase ND2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 473 FT DIRECTIONS : positive FT EDITING : 18 S(tCa) -> L(tTa) FT EDITING : 20 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 473 NT; CD 1 tctcccactc cagtcgttgc ttttctttct gttacttcga aagtagctgc CD 51 ttCagcttCa gccactcgaa ttttcgatat tcctttttat ttctcatcaa CD 101 acgaatggca tcttcttctg gaaatcctag ctattcttag catgatattg CD 151 ggaaatctca ttgctattac tcaaacaagc atgaaacgta tgcttgcata CD 201 ttcgtccata ggccaaatcg gatatgtaat tattggaata attgttggag CD 251 actcaaatga tggatatgca agcatgataa cttatatgct gttctatatc CD 301 tccatgaatc taggaacttt tgcttgcatt gtattatttg gtctacgtac CD 351 cggaactgat aacattcgag attatgcagg attatacaca aaagatcctt CD 401 ttttggctct ctctttagcc ctatgtctct tatccctagg aggtcttcct CD 451 ccactagcag gttttttcgg aaa FT EDITED CDNA CD 1 tctcccactc cagtcgttgc ttttctttct gttacttcga aagtagctgc CD 51 ttTagcttTa gccactcgaa ttttcgatat tcctttttat ttctcatcaa CD 101 acgaatggca tcttcttctg gaaatcctag ctattcttag catgatattg CD 151 ggaaatctca ttgctattac tcaaacaagc atgaaacgta tgcttgcata CD 201 ttcgtccata ggccaaatcg gatatgtaat tattggaata attgttggag CD 251 actcaaatga tggatatgca agcatgataa cttatatgct gttctatatc CD 301 tccatgaatc taggaacttt tgcttgcatt gtattatttg gtctacgtac CD 351 cggaactgat aacattcgag attatgcagg attatacaca aaagatcctt CD 401 ttttggctct ctctttagcc ctatgtctct tatccctagg aggtcttcct CD 451 ccactagcag gttttttcgg aaa SQ SEQUENCE 158 AA; SPTPVVAFLS VTSKVAALAL ATRIFDIPFY FSSNEWHLLL EILAILSMIL GNLIAITQTS MKRMLAYSSI GQIGYVIIGI IVGDSNDGYA SMITYMLFYI SMNLGTFACI VLFGLRTGTD NIRDYAGLYT KDPFLALSLA LCLLSLGGLP PLAGFFGX // ID AB098227_1 STANDARD; PRT; 165 AA. AC AB098227; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhA gene for NADH dehydrogenase ND1 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77566.1 FT PROTEIN_NAME : NADH dehydrogenase ND1 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 494 FT DIRECTIONS : positive FT EDITING : 98 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 494 NT; CD 1 ttggaatcct taaaagaagt ctatgggatc atatggatgc ttttccctat CD 51 tttgactctt gtattaggaa tcacaatagg tgtactagta attgtttggt CD 101 tagaaagaga aatatctgca ggaatacaac aacgtatcgg acctgaatat CD 151 gctggccctt taggaattct tcaagctcta gcagatggga caaaactact CD 201 tttgaaagag aaccttattc catctacagg agatactcgt ttattcagta CD 251 tcggaccatc catagcagta atatccatct ttctaagtta ttCagtaatt CD 301 ccttttggtg atcaccttgt tctagccgat cttagtattg gtgttttttt CD 351 ctggattgcc atttcaagta ttgctcccgt tggacttctt atgtcgggat CD 401 atggatcaaa taataaatat tcttttttag gtggtctacg ggcagctgct CD 451 caatcaatta gttatgaaat accattagct ctatgtgtgt tatc FT EDITED CDNA CD 1 ttggaatcct taaaagaagt ctatgggatc atatggatgc ttttccctat CD 51 tttgactctt gtattaggaa tcacaatagg tgtactagta attgtttggt CD 101 tagaaagaga aatatctgca ggaatacaac aacgtatcgg acctgaatat CD 151 gctggccctt taggaattct tcaagctcta gcagatggga caaaactact CD 201 tttgaaagag aaccttattc catctacagg agatactcgt ttattcagta CD 251 tcggaccatc catagcagta atatccatct ttctaagtta ttTagtaatt CD 301 ccttttggtg atcaccttgt tctagccgat cttagtattg gtgttttttt CD 351 ctggattgcc atttcaagta ttgctcccgt tggacttctt atgtcgggat CD 401 atggatcaaa taataaatat tcttttttag gtggtctacg ggcagctgct CD 451 caatcaatta gttatgaaat accattagct ctatgtgtgt tatc SQ SEQUENCE 165 AA; LESLKEVYGI IWMLFPILTL VLGITIGVLV IVWLEREISA GIQQRIGPEY AGPLGILQAL ADGTKLLLKE NLIPSTGDTR LFSIGPSIAV ISIFLSYLVI PFGDHLVLAD LSIGVFFWIA ISSIAPVGLL MSGYGSNNKY SFLGGLRAAA QSISYEIPLA LCVLS // ID AB098228_1 STANDARD; PRT; 178 AA. AC AB098228; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhA gene for NADH dehydrogenase ND1 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : ndhA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77567.1 FT PROTEIN_NAME : NADH dehydrogenase ND1 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 534 FT DIRECTIONS : positive FT EDITING : 172 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 534 NT; CD 1 aacagtttaa gtacagttga tatagtggaa gcgcagtcaa aatatggctt CD 51 ttgggggtgg aatttgtggc gtcaacccat cgggtttatc gtttttctaa CD 101 tttcttctct agccgagtgt gaaagattac cttttgattt accagaagca CD 151 gaagaagaat tagtagcagg gtatcaaacc gaatattcag gtatcaaatt CD 201 tggtttattt tacattgctt catatctgaa tctactagtt tcttcattat CD 251 ttgtaacagt tctttatttg ggaggttgga atctttctat tccgtacata CD 301 tttgttcctg agctatttgg cataaataaa aggggtaaag tctttggaac CD 351 actaattggt atctttatca cattagccaa aacttatttg tttttgttca CD 401 ttcctattgc aacaagatgg actttaccga ggctgagaat ggaccaacta CD 451 ttaaatcttg ggtggaaatt tcttttacct atttctctag gtaatctatt CD 501 attgacaacc tcgtCccaac ttctttcact gtaa FT EDITED CDNA CD 1 aacagtttaa gtacagttga tatagtggaa gcgcagtcaa aatatggctt CD 51 ttgggggtgg aatttgtggc gtcaacccat cgggtttatc gtttttctaa CD 101 tttcttctct agccgagtgt gaaagattac cttttgattt accagaagca CD 151 gaagaagaat tagtagcagg gtatcaaacc gaatattcag gtatcaaatt CD 201 tggtttattt tacattgctt catatctgaa tctactagtt tcttcattat CD 251 ttgtaacagt tctttatttg ggaggttgga atctttctat tccgtacata CD 301 tttgttcctg agctatttgg cataaataaa aggggtaaag tctttggaac CD 351 actaattggt atctttatca cattagccaa aacttatttg tttttgttca CD 401 ttcctattgc aacaagatgg actttaccga ggctgagaat ggaccaacta CD 451 ttaaatcttg ggtggaaatt tcttttacct atttctctag gtaatctatt CD 501 attgacaacc tcgtTccaac ttctttcact gtaa SQ SEQUENCE 178 AA; NSLSTVDIVE AQSKYGFWGW NLWRQPIGFI VFLISSLAEC ERLPFDLPEA EEELVAGYQT EYSGIKFGLF YIASYLNLLV SSLFVTVLYL GGWNLSIPYI FVPELFGINK RGKVFGTLIG IFITLAKTYL FLFIPIATRW TLPRLRMDQL LNLGWKFLLP ISLGNLLLTT SFQLLSL* // ID AB098229_1 STANDARD; PRT; 47 AA. AC AB098229; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris atpF gene for ATP synthase I subunit, partial OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : atpF FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77568.1 FT PROTEIN_NAME : ATP synthase I subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 141 FT DIRECTIONS : positive FT EDITING : 31 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 141 NT; CD 1 atgaaaaacg taaccgattc tttcgtttct ttgggccact ggccatctgc CD 51 cgggagtttc gggtttaata ccgatatttt agcaacaaat cCaataaatc CD 101 taagtgtagt gcttggtgta ttgatttttt ttggaaaggg a FT EDITED CDNA CD 1 atgaaaaacg taaccgattc tttcgtttct ttgggccact ggccatctgc CD 51 cgggagtttc gggtttaata ccgatatttt agcaacaaat cTaataaatc CD 101 taagtgtagt gcttggtgta ttgatttttt ttggaaaggg a SQ SEQUENCE 47 AA; MKNVTDSFVS LGHWPSAGSF GFNTDILATN LINLSVVLGV LIFFGKG // ID AB098230_1 STANDARD; PRT; 170 AA. AC AB098230; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris atpA gene for ATP synthase alpha subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : atpA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77569.1 FT PROTEIN_NAME : ATP synthase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 509 FT DIRECTIONS : positive FT EDITING : 87 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 509 NT; CD 1 gcagtagcca cagatacgat cctcaatcaa caaggtcaaa atgtaatatg CD 51 tgtttatgta gctattgggc aaaaagcatc ttctgtggcc caggtcgtaa CD 101 ctactttaca ggaaagggga gcgatggaat acactattgt ggtagccgaa CD 151 acggcagatt cccctgctac attacaatac cttgctcctt atacaggagc CD 201 agctctggct gaatatttta tgtatcgtga acgacacact ttaatcattt CD 251 atgatgatcC ctccaaacaa gcgcaagctt atcgccaaat gtctcttcta CD 301 ttacgaagac cgcccggtcg tgaagcttat ccaggagatg ttttttattt CD 351 gcattcacgc cttttggaaa gagccgctaa attaagttct agtttaggtg CD 401 aaggaagtat gaccgcctta ccaatagttg aaacccaatc gggagatgtt CD 451 tcggcttata ttcctactaa tgtaatttcc attactgatg gacaaatctt CD 501 cttatccgc FT EDITED CDNA CD 1 gcagtagcca cagatacgat cctcaatcaa caaggtcaaa atgtaatatg CD 51 tgtttatgta gctattgggc aaaaagcatc ttctgtggcc caggtcgtaa CD 101 ctactttaca ggaaagggga gcgatggaat acactattgt ggtagccgaa CD 151 acggcagatt cccctgctac attacaatac cttgctcctt atacaggagc CD 201 agctctggct gaatatttta tgtatcgtga acgacacact ttaatcattt CD 251 atgatgatcT ctccaaacaa gcgcaagctt atcgccaaat gtctcttcta CD 301 ttacgaagac cgcccggtcg tgaagcttat ccaggagatg ttttttattt CD 351 gcattcacgc cttttggaaa gagccgctaa attaagttct agtttaggtg CD 401 aaggaagtat gaccgcctta ccaatagttg aaacccaatc gggagatgtt CD 451 tcggcttata ttcctactaa tgtaatttcc attactgatg gacaaatctt CD 501 cttatccgc SQ SEQUENCE 170 AA; AVATDTILNQ QGQNVICVYV AIGQKASSVA QVVTTLQERG AMEYTIVVAE TADSPATLQY LAPYTGAALA EYFMYRERHT LIIYDDLSKQ AQAYRQMSLL LRRPPGREAY PGDVFYLHSR LLERAAKLSS SLGEGSMTAL PIVETQSGDV SAYIPTNVIS ITDGQIFLSA // ID AB098231_1 STANDARD; PRT; 237 AA. AC AB098231; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rps2 gene for ribosomal protein S2, OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT Full length CDS FT GENE : rps2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77570.1 FT PROTEIN_NAME : ribosomal protein S2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 711 FT DIRECTIONS : positive FT EDITING : 45 T(aCa) -> I(aTa) FT EDITING : 83 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 711 NT; CD 1 atgacaagaa gatattggaa cataaatttg gaagagatga tggaggcagg CD 51 agttcatttt ggtcatggta ctaggaaatg gaatcctaaa atggcgcctt CD 101 atatctctgc aaagcgtaag ggtattcata ttaCaaatct tactagaact CD 151 gctcgttttt tatcagaagc ttgtgattta gtttttgacg cagcaagtag CD 201 gggaaaacaa ttcttaattg ttggtaccaa aaataaagca gctgattCag CD 251 tagagtgggc tgcaataagg gcccggtgtc attatgttaa taaaaaatgg CD 301 cttggcggta tgttaacgaa ttggtccact accgaaacaa gacttcataa CD 351 gttcagggac ttgagaatgg aacaaaaaac agggagactc aaccgtctcc CD 401 cgaaaagaga tgcagctatg ttgaaaagac aattatctcg cttgcaaaca CD 451 tatctgggcg ggattaaata tatgacaggg gtacccgata ttgtaatcat CD 501 cgttgatcag cacgaagaat atacggccct gcgagagtgt attactttag CD 551 gaattccaac aatttattta accgatacaa attgtgaccc cgatctcgca CD 601 gatatttcaa ttccagcgaa tgatgacgcc atatcctcaa tccgattaat CD 651 tcttaacaaa ttagtattcg caatttgtga gggtcgttct agctatataa CD 701 gaaatccttg a FT EDITED CDNA CD 1 atgacaagaa gatattggaa cataaatttg gaagagatga tggaggcagg CD 51 agttcatttt ggtcatggta ctaggaaatg gaatcctaaa atggcgcctt CD 101 atatctctgc aaagcgtaag ggtattcata ttaTaaatct tactagaact CD 151 gctcgttttt tatcagaagc ttgtgattta gtttttgacg cagcaagtag CD 201 gggaaaacaa ttcttaattg ttggtaccaa aaataaagca gctgattTag CD 251 tagagtgggc tgcaataagg gcccggtgtc attatgttaa taaaaaatgg CD 301 cttggcggta tgttaacgaa ttggtccact accgaaacaa gacttcataa CD 351 gttcagggac ttgagaatgg aacaaaaaac agggagactc aaccgtctcc CD 401 cgaaaagaga tgcagctatg ttgaaaagac aattatctcg cttgcaaaca CD 451 tatctgggcg ggattaaata tatgacaggg gtacccgata ttgtaatcat CD 501 cgttgatcag cacgaagaat atacggccct gcgagagtgt attactttag CD 551 gaattccaac aatttattta accgatacaa attgtgaccc cgatctcgca CD 601 gatatttcaa ttccagcgaa tgatgacgcc atatcctcaa tccgattaat CD 651 tcttaacaaa ttagtattcg caatttgtga gggtcgttct agctatataa CD 701 gaaatccttg a SQ SEQUENCE 237 AA; MTRRYWNINL EEMMEAGVHF GHGTRKWNPK MAPYISAKRK GIHIINLTRT ARFLSEACDL VFDAASRGKQ FLIVGTKNKA ADLVEWAAIR ARCHYVNKKW LGGMLTNWST TETRLHKFRD LRMEQKTGRL NRLPKRDAAM LKRQLSRLQT YLGGIKYMTG VPDIVIIVDQ HEEYTALREC ITLGIPTIYL TDTNCDPDLA DISIPANDDA ISSIRLILNK LVFAICEGRS SYIRNP* // ID AB098232_1 STANDARD; PRT; 100 AA. AC AB098232; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rps14 gene for ribosomal protein S14, OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : rps14 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77571.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 300 FT DIRECTIONS : positive FT EDITING : 27 S(tCa) -> L(tTa) FT EDITING : 50 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 300 NT; CD 1 atggcaagga aaagtttgat tcagagggag aagaagaggc aaaaattgga CD 51 acagaaatat cattcgattc gtcgatcctC aaaaaaagaa ataagcaagg CD 101 ttccgtcgtt gagtgacaaa tgggaaattt atggaaagtt acaatcccCa CD 151 ccacggaata gtgcacctac acgccttcat cgacgttgtt ttttgaccgg CD 201 aaggccgaga gctaactatc gggactttgg actatccgga cacatacttc CD 251 gtgaaatggt tcatgcatgt ttgttgccag gagcaacaag atcaagttgg FT EDITED CDNA CD 1 atggcaagga aaagtttgat tcagagggag aagaagaggc aaaaattgga CD 51 acagaaatat cattcgattc gtcgatcctT aaaaaaagaa ataagcaagg CD 101 ttccgtcgtt gagtgacaaa tgggaaattt atggaaagtt acaatcccTa CD 151 ccacggaata gtgcacctac acgccttcat cgacgttgtt ttttgaccgg CD 201 aaggccgaga gctaactatc gggactttgg actatccgga cacatacttc CD 251 gtgaaatggt tcatgcatgt ttgttgccag gagcaacaag atcaagttgg SQ SEQUENCE 100 AA; MARKSLIQRE KKRQKLEQKY HSIRRSLKKE ISKVPSLSDK WEIYGKLQSL PRNSAPTRLH RRCFLTGRPR ANYRDFGLSG HILREMVHAC LLPGATRSSW // ID AB098233_1 STANDARD; PRT; 110 AA. AC AB098233; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rpoC2 gene for RNA polymerase beta'' OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoC2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77572.1 FT PROTEIN_NAME : RNA polymerase beta'' subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 329 FT DIRECTIONS : positive FT EDITING : 46 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 329 NT; CD 1 atctctttgg ttaataaaat ccaacaggtt tatcgctccc agggggtgca CD 51 gattcataat aggcatatag aaattattgt acgtcaaata acatcaaaag CD 101 tgttggtttc agaagatgga atgtctaatg ttttttCacc cggagaactt CD 151 attggattgt tgcgagcaga acgaatgggg cgcgctttgg aagaagcgat CD 201 ctgttaccga gtcgtcttat tgggaataac aagagcatct ctcaatactc CD 251 aaagtttcat atctgaagcg agttttcaag agactgctcg agttttagca CD 301 aaagcggctc ttcggggtcg tatcgattg FT EDITED CDNA CD 1 atctctttgg ttaataaaat ccaacaggtt tatcgctccc agggggtgca CD 51 gattcataat aggcatatag aaattattgt acgtcaaata acatcaaaag CD 101 tgttggtttc agaagatgga atgtctaatg ttttttTacc cggagaactt CD 151 attggattgt tgcgagcaga acgaatgggg cgcgctttgg aagaagcgat CD 201 ctgttaccga gtcgtcttat tgggaataac aagagcatct ctcaatactc CD 251 aaagtttcat atctgaagcg agttttcaag agactgctcg agttttagca CD 301 aaagcggctc ttcggggtcg tatcgattg SQ SEQUENCE 110 AA; ISLVNKIQQV YRSQGVQIHN RHIEIIVRQI TSKVLVSEDG MSNVFLPGEL IGLLRAERMG RALEEAICYR VVLLGITRAS LNTQSFISEA SFQETARVLA KAALRGRIDX // ID AB098234_1 STANDARD; PRT; 150 AA. AC AB098234; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rpoC1 gene for RNA polymerase beta' OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoC1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77573.1 FT PROTEIN_NAME : RNA polymerase beta' subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 449 FT DIRECTIONS : positive FT EDITING : 21 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 449 NT; CD 1 atgaataata atttttcttc tatgatcgat cgatataaac atcaacagct CD 51 ccgaattgga tCagtttctc ctcaacaaat aagtgcttgg gccactaaaa CD 101 tcctgcctaa tggagagata gttggagagg taacaaaacc ctatactttt CD 151 cattacaaaa ctaacaaacc ggaaaaagat ggattatttt gtgaaagaat CD 201 ttttggtcct ataaaaagcg gaatttgtgc ttgtggaaat tatcgagtaa CD 251 tcggagatga aaaagaagac ccgaaatttt gtgaacaatg cggggtcgaa CD 301 tttgttgatt ctcggatacg aaggtatcaa atgggctata tcaaactcgc CD 351 atgcccagta acccatgtgt ggtatttaaa acgtcttcct agttatattg CD 401 cgaatctttt agataaacct cttaaagaat tagaaggcct agtatactg FT EDITED CDNA CD 1 atgaataata atttttcttc tatgatcgat cgatataaac atcaacagct CD 51 ccgaattgga tTagtttctc ctcaacaaat aagtgcttgg gccactaaaa CD 101 tcctgcctaa tggagagata gttggagagg taacaaaacc ctatactttt CD 151 cattacaaaa ctaacaaacc ggaaaaagat ggattatttt gtgaaagaat CD 201 ttttggtcct ataaaaagcg gaatttgtgc ttgtggaaat tatcgagtaa CD 251 tcggagatga aaaagaagac ccgaaatttt gtgaacaatg cggggtcgaa CD 301 tttgttgatt ctcggatacg aaggtatcaa atgggctata tcaaactcgc CD 351 atgcccagta acccatgtgt ggtatttaaa acgtcttcct agttatattg CD 401 cgaatctttt agataaacct cttaaagaat tagaaggcct agtatactg SQ SEQUENCE 150 AA; MNNNFSSMID RYKHQQLRIG LVSPQQISAW ATKILPNGEI VGEVTKPYTF HYKTNKPEKD GLFCERIFGP IKSGICACGN YRVIGDEKED PKFCEQCGVE FVDSRIRRYQ MGYIKLACPV THVWYLKRLP SYIANLLDKP LKELEGLVYX // ID AB098235_1 STANDARD; PRT; 146 AA. AC AB098235; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rpoB gene for RNA polymerase beta OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77574.1 FT PROTEIN_NAME : RNA polymerase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 437 FT DIRECTIONS : positive FT EDITING : 94 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 437 NT; CD 1 gattcggggg ctcttgctat agccgaacgc gagggaaggg tcgtttatac CD 51 caatactgac aagattcttt tagcaggtaa tggagatatt ctaagcattc CD 101 cattagttat atatcaacgt tccaataaaa atacttgtat gcatcaaaaa CD 151 ctccaggttc ctcggggtaa atgcattaaa aagggacaaa ttttagcgga CD 201 tggtgctgct acggttggtg gcgaacttgc tttggggaaa aacgtattag CD 251 tagcttatat gccgtgggag ggttacaatt Ctgaagatgc agtacttatt CD 301 agcgagcgtt tggtatatga agatatttat acttcttttc acatacggaa CD 351 atatgaaatt cagactcatg tgacaagcca aggccctgaa aaagtaacta CD 401 atgaaatacc gcatttagaa gcccatttac tccgcaa FT EDITED CDNA CD 1 gattcggggg ctcttgctat agccgaacgc gagggaaggg tcgtttatac CD 51 caatactgac aagattcttt tagcaggtaa tggagatatt ctaagcattc CD 101 cattagttat atatcaacgt tccaataaaa atacttgtat gcatcaaaaa CD 151 ctccaggttc ctcggggtaa atgcattaaa aagggacaaa ttttagcgga CD 201 tggtgctgct acggttggtg gcgaacttgc tttggggaaa aacgtattag CD 251 tagcttatat gccgtgggag ggttacaatt Ttgaagatgc agtacttatt CD 301 agcgagcgtt tggtatatga agatatttat acttcttttc acatacggaa CD 351 atatgaaatt cagactcatg tgacaagcca aggccctgaa aaagtaacta CD 401 atgaaatacc gcatttagaa gcccatttac tccgcaa SQ SEQUENCE 146 AA; DSGALAIAER EGRVVYTNTD KILLAGNGDI LSIPLVIYQR SNKNTCMHQK LQVPRGKCIK KGQILADGAA TVGGELALGK NVLVAYMPWE GYNFEDAVLI SERLVYEDIY TSFHIRKYEI QTHVTSQGPE KVTNEIPHLE AHLLRX // ID AB098236_1 STANDARD; PRT; 129 AA. AC AB098236; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rpoB gene for RNA polymerase beta OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77575.1 FT PROTEIN_NAME : RNA polymerase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 385 FT DIRECTIONS : positive FT EDITING : 3 S(tCt) -> F(tTt) FT EDITING : 48 S(tCa) -> L(tTa) FT EDITING : 74 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 385 NT; CD 1 ggaacttCta tagtcaatgg aatatataga attgtgatca atcaaatatt CD 51 gcaaagtccc ggtatttatt accgatcaga attggaccat aacggaattt CD 101 cggtctatac cggcaccata atatcagatt ggggaggaag atCagaatta CD 151 gaaattgata gaaaagcaag gatatgggct cgtgtaagta ggaaacaaaa CD 201 aatatctatt ctagttctat Catcagctat gggtttgaat ctaagagaaa CD 251 ttctagaaaa tgtttgctat cctgaaattt ttttgtcttt tctgagtgat CD 301 aaggagagaa aaaaaattgg gtcaaaagaa aatgccattt tggagtttta CD 351 tcaacaattt gcttgtgtag gtggcgatcc ggtat FT EDITED CDNA CD 1 ggaacttTta tagtcaatgg aatatataga attgtgatca atcaaatatt CD 51 gcaaagtccc ggtatttatt accgatcaga attggaccat aacggaattt CD 101 cggtctatac cggcaccata atatcagatt ggggaggaag atTagaatta CD 151 gaaattgata gaaaagcaag gatatgggct cgtgtaagta ggaaacaaaa CD 201 aatatctatt ctagttctat Tatcagctat gggtttgaat ctaagagaaa CD 251 ttctagaaaa tgtttgctat cctgaaattt ttttgtcttt tctgagtgat CD 301 aaggagagaa aaaaaattgg gtcaaaagaa aatgccattt tggagtttta CD 351 tcaacaattt gcttgtgtag gtggcgatcc ggtat SQ SEQUENCE 129 AA; GTFIVNGIYR IVINQILQSP GIYYRSELDH NGISVYTGTI ISDWGGRLEL EIDRKARIWA RVSRKQKISI LVLLSAMGLN LREILENVCY PEIFLSFLSD KERKKIGSKE NAILEFYQQF ACVGGDPVX // ID AB098237_1 STANDARD; PRT; 78 AA. AC AB098237; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rpoA gene for RNA polymerase alpha OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77576.1 FT PROTEIN_NAME : RNA polymerase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 233 FT DIRECTIONS : positive FT EDITING : 32 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 233 NT; CD 1 tttcctttat ccccttttac ctttcatgat aaattggcta aactcataaa CD 51 aaacaaaaaa aaaatagcat tgaaatcgat ttttattgac caatCagaat CD 101 tgccttccag gatctataat tgcctcaaaa tgtccaatat atatacattg CD 151 ttggaccttt tgaataacag ccaagaagat cttatgaaaa ttgaacattt CD 201 tcgtagcgaa gatgtaaaac agatattggg cat FT EDITED CDNA CD 1 tttcctttat ccccttttac ctttcatgat aaattggcta aactcataaa CD 51 aaacaaaaaa aaaatagcat tgaaatcgat ttttattgac caatTagaat CD 101 tgccttccag gatctataat tgcctcaaaa tgtccaatat atatacattg CD 151 ttggaccttt tgaataacag ccaagaagat cttatgaaaa ttgaacattt CD 201 tcgtagcgaa gatgtaaaac agatattggg cat SQ SEQUENCE 78 AA; FPLSPFTFHD KLAKLIKNKK KIALKSIFID QLELPSRIYN CLKMSNIYTL LDLLNNSQED LMKIEHFRSE DVKQILGX // ID AB098238_1 STANDARD; PRT; 71 AA. AC AB098238; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rpl20 gene for ribosomal protein L20, OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : rpl20 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77577.1 FT PROTEIN_NAME : ribosomal protein L20 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 213 FT DIRECTIONS : positive FT EDITING : 45 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 213 NT; CD 1 cgtttgtgga tcactcggat aaacgcagta attcgcgaaa ggggagtatc CD 51 ctatagttat agtagattaa tacacgatct gtacaagaga cagttgcttc CD 101 ttaaccgtaa aatacttgca caaatagcta tatCaaatag gaattgtctt CD 151 tatatgattt cgaacgaaat cataaaggaa gtagattgga aagaatccac CD 201 cagaataatt taa FT EDITED CDNA CD 1 cgtttgtgga tcactcggat aaacgcagta attcgcgaaa ggggagtatc CD 51 ctatagttat agtagattaa tacacgatct gtacaagaga cagttgcttc CD 101 ttaaccgtaa aatacttgca caaatagcta tatTaaatag gaattgtctt CD 151 tatatgattt cgaacgaaat cataaaggaa gtagattgga aagaatccac CD 201 cagaataatt taa SQ SEQUENCE 71 AA; RLWITRINAV IRERGVSYSY SRLIHDLYKR QLLLNRKILA QIAILNRNCL YMISNEIIKE VDWKESTRII * // ID AB098239_1 STANDARD; PRT; 39 AA. AC AB098239; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis psbL gene for PSII L-protein, complete OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77578.1 FT PROTEIN_NAME : PSII L-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 145 - 261 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AB098240_1 STANDARD; PRT; 84 AA. AC AB098240; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis psbE gene for PSII cytochrome b559 8 kDa OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT Full length CDS FT GENE : psbE FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77579.1 FT PROTEIN_NAME : PSII cytochrome b559 8 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 252 FT DIRECTIONS : positive FT EDITING : 72 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 252 NT; CD 1 atgtctggaa gcacaggaga acgttcgttt gctgatatta ttaccagtat CD 51 tcgatactgg gtcattcata gcattactat accttcccta ttcattgcgg CD 101 gttggttatt tgtcagcacc ggtttagctt acgatgtgtt tggaagccct CD 151 cggccaaacg agtattttac agagagccga caaggaattc cattaataac CD 201 tggccgtttt gatCctttgg aacaactcga tgaatttagt agatcgtttt CD 251 ag FT EDITED CDNA CD 1 atgtctggaa gcacaggaga acgttcgttt gctgatatta ttaccagtat CD 51 tcgatactgg gtcattcata gcattactat accttcccta ttcattgcgg CD 101 gttggttatt tgtcagcacc ggtttagctt acgatgtgtt tggaagccct CD 151 cggccaaacg agtattttac agagagccga caaggaattc cattaataac CD 201 tggccgtttt gatTctttgg aacaactcga tgaatttagt agatcgtttt CD 251 ag SQ SEQUENCE 84 AA; MSGSTGERSF ADIITSIRYW VIHSITIPSL FIAGWLFVST GLAYDVFGSP RPNEYFTESR QGIPLITGRF DSLEQLDEFS RSF* // ID AB098241_1 STANDARD; PRT; 69 AA. AC AB098241; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis petB gene for cytochrome b6, partial cds. OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : petB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77580.1 FT PROTEIN_NAME : cytochrome b6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 207 FT DIRECTIONS : positive FT EDITING : 57 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 207 NT; CD 1 gtgaaaatag taacaggtgt ccctgacgct attcctgtaa taggatcacc CD 51 cttggtcgaa ttattgcgcg gaagcgctag tgtgggacaa tctactttga CD 101 ctcgttttta tagtttacac acttttgtat tgccgcttct tactgccgta CD 151 tttatgttaa tgcactttcC aatgatacgt aaacaaggta tttctgggcc CD 201 tttatag FT EDITED CDNA CD 1 gtgaaaatag taacaggtgt ccctgacgct attcctgtaa taggatcacc CD 51 cttggtcgaa ttattgcgcg gaagcgctag tgtgggacaa tctactttga CD 101 ctcgttttta tagtttacac acttttgtat tgccgcttct tactgccgta CD 151 tttatgttaa tgcactttcT aatgatacgt aaacaaggta tttctgggcc CD 201 tttatag SQ SEQUENCE 69 AA; VKIVTGVPDA IPVIGSPLVE LLRGSASVGQ STLTRFYSLH TFVLPLLTAV FMLMHFLMIR KQGISGPL* // ID AB098242_1 STANDARD; PRT; 122 AA. AC AB098242; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhF gene for NADH dehydrogenase ND 5 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhF FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77581.1 FT PROTEIN_NAME : NADH dehydrogenase ND 5 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 364 FT DIRECTIONS : positive FT EDITING : 53 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 364 NT; CD 1 gttttattgt taagcatagt catggttttt tcaatctacc tgtctattca CD 51 gcaaataaat agccgttctt tttatcaata tgtatggtct tggatcatca CD 101 ataatgattt ttctttagag ttcggatact tgatcgaccc acttacttct CD 151 attatgtCaa tattaatcac tactgttgga attatggttc ttatttatag CD 201 tgataattat atggctcatg atcaaggcta tttgagattt tttgcttata CD 251 tgagtttttt cagtacttcc atgttgggat tagttactag ttcgaatttg CD 301 atacaaattt atattttttg ggaattggtt gggctgtgtt cctatctatt CD 351 aataggattt tggt FT EDITED CDNA CD 1 gttttattgt taagcatagt catggttttt tcaatctacc tgtctattca CD 51 gcaaataaat agccgttctt tttatcaata tgtatggtct tggatcatca CD 101 ataatgattt ttctttagag ttcggatact tgatcgaccc acttacttct CD 151 attatgtTaa tattaatcac tactgttgga attatggttc ttatttatag CD 201 tgataattat atggctcatg atcaaggcta tttgagattt tttgcttata CD 251 tgagtttttt cagtacttcc atgttgggat tagttactag ttcgaatttg CD 301 atacaaattt atattttttg ggaattggtt gggctgtgtt cctatctatt CD 351 aataggattt tggt SQ SEQUENCE 122 AA; VLLLSIVMVF SIYLSIQQIN SRSFYQYVWS WIINNDFSLE FGYLIDPLTS IMLILITTVG IMVLIYSDNY MAHDQGYLRF FAYMSFFSTS MLGLVTSSNL IQIYIFWELV GLCSYLLIGF WX // ID AB098243_1 STANDARD; PRT; 116 AA. AC AB098243; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhD gene for NADH dehydrogenase ND 4 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77582.1 FT PROTEIN_NAME : NADH dehydrogenase ND 4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 348 FT DIRECTIONS : positive FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 68 S(tCg) -> L(tTg) FT CODON_START : 2 CL CDNALEN 348 NT; CD 1 aaagaaacgt ctgtactcag ctacaaaatt tattttgtac acggcggggg CD 51 gttctgtttt tctcttaatg ggagttttgg gtgttgcttt atatggttct CD 101 aatgaaccaa cattaaattt tgaaacatCa gttaatcagt catatcctgt CD 151 ggttttagaa ataatattct atattggatt ttttattgct tttgctgtca CD 201 aatCgcccat tatcccccta cacacatggt taccagatac ccatggagaa CD 251 gcacattaca gtacttgtat gcttctagcc ggaatcttat taaaaatggg CD 301 agcgtatgga ttaattcgaa tcaatatgga attattacct catgccca FT EDITED CDNA CD 1 aaagaaacgt ctgtactcag ctacaaaatt tattttgtac acggcggggg CD 51 gttctgtttt tctcttaatg ggagttttgg gtgttgcttt atatggttct CD 101 aatgaaccaa cattaaattt tgaaacatTa gttaatcagt catatcctgt CD 151 ggttttagaa ataatattct atattggatt ttttattgct tttgctgtca CD 201 aatTgcccat tatcccccta cacacatggt taccagatac ccatggagaa CD 251 gcacattaca gtacttgtat gcttctagcc ggaatcttat taaaaatggg CD 301 agcgtatgga ttaattcgaa tcaatatgga attattacct catgccca SQ SEQUENCE 116 AA; KKRLYSATKF ILYTAGGSVF LLMGVLGVAL YGSNEPTLNF ETLVNQSYPV VLEIIFYIGF FIAFAVKLPI IPLHTWLPDT HGEAHYSTCM LLAGILLKMG AYGLIRINME LLPHAX // ID AB098244_2 STANDARD; PRT; 157 AA. AC AB098244; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis psaC, ndhD genes for PSI 9 kDa protein, OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77584.1 FT PROTEIN_NAME : putative NADH dehydrogenase ND 4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 246 - 714 FT DIRECTIONS : positive FT EDITING : 137 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 469 NT; CD 1 atggtccaag tgtatcttgt ctttactacg aattattttc cttggttaac CD 51 aataattgta gtttttccaa tatttgcggg ttccttaatt ttctttcttc CD 101 cccataaagg aaatagggta attaggtggt ataccatatg tatatgtatt CD 151 ttagaactcc ttctaacaac ttatgcattt tgttatcatt tccaatcgga CD 201 tgatccatta atccaactag tggaggatta taaatggatc aatttttttg CD 251 atttccattg gagattagga atagatggac tttctatagg acccatttta CD 301 ttaacaggat ttatcactac tttagctact ttagcggctt ggccaattac CD 351 tcgagattct cgattattcc attttctcat gttagcaatg tacagtggtc CD 401 aaattggatC attttcgtct cgggaccttt tacttttttt catcatgtgg CD 451 gagttagaat taattcctg FT EDITED CDNA CD 1 atggtccaag tgtatcttgt ctttactacg aattattttc cttggttaac CD 51 aataattgta gtttttccaa tatttgcggg ttccttaatt ttctttcttc CD 101 cccataaagg aaatagggta attaggtggt ataccatatg tatatgtatt CD 151 ttagaactcc ttctaacaac ttatgcattt tgttatcatt tccaatcgga CD 201 tgatccatta atccaactag tggaggatta taaatggatc aatttttttg CD 251 atttccattg gagattagga atagatggac tttctatagg acccatttta CD 301 ttaacaggat ttatcactac tttagctact ttagcggctt ggccaattac CD 351 tcgagattct cgattattcc attttctcat gttagcaatg tacagtggtc CD 401 aaattggatT attttcgtct cgggaccttt tacttttttt catcatgtgg CD 451 gagttagaat taattcctg SQ SEQUENCE 157 AA; MVQVYLVFTT NYFPWLTIIV VFPIFAGSLI FFLPHKGNRV IRWYTICICI LELLLTTYAF CYHFQSDDPL IQLVEDYKWI NFFDFHWRLG IDGLSIGPIL LTGFITTLAT LAAWPITRDS RLFHFLMLAM YSGQIGLFSS RDLLLFFIMW ELELIPX // ID AB098245_1 STANDARD; PRT; 74 AA. AC AB098245; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhB gene for NADH dehydrogenase ND 2 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : ndhB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77585.1 FT PROTEIN_NAME : NADH dehydrogenase ND 2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 222 FT DIRECTIONS : positive FT EDITING : 57 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 222 NT; CD 1 cttacaagcg ttgtttctat ctactattat ctaaaaataa taaagttatt CD 51 aatgactgga cgaaaccaag aaataacccc tcacgtgcga aattatcgaa CD 101 gatccccttt aagatcaaac aattccatcg aattgagtat gattgtatgt CD 151 gtgatagcat ctactatacC aggaatatca atgaacccga ttattgcaat CD 201 tgctcaggat agcctttttt ag FT EDITED CDNA CD 1 cttacaagcg ttgtttctat ctactattat ctaaaaataa taaagttatt CD 51 aatgactgga cgaaaccaag aaataacccc tcacgtgcga aattatcgaa CD 101 gatccccttt aagatcaaac aattccatcg aattgagtat gattgtatgt CD 151 gtgatagcat ctactatacT aggaatatca atgaacccga ttattgcaat CD 201 tgctcaggat agcctttttt ag SQ SEQUENCE 74 AA; LTSVVSIYYY LKIIKLLMTG RNQEITPHVR NYRRSPLRSN NSIELSMIVC VIASTILGIS MNPIIAIAQD SLF* // ID AB098246_1 STANDARD; PRT; 159 AA. AC AB098246; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhB gene for NADH dehydrogenase ND 2 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77586.1 FT PROTEIN_NAME : NADH dehydrogenase ND 2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 477 FT DIRECTIONS : positive FT EDITING : 7 A(gCc) -> V(gTc) FT CODON_START : 1 CL CDNALEN 477 NT; CD 1 tctcccactc cagtcgttgC ctttctttct gttacttcga aagtagctgc CD 51 ttcagcttca gccactcgaa ttttcgatat tcctttttat ttctcatcaa CD 101 acgaatggca tcttcttctg gaaatcctag ctattcttag catgatattg CD 151 ggaaatctca ttgctattac tcaaacaagc atgaaacgta tgcttgcata CD 201 ttcgtccata ggccaaatcg gatatgtaat tattggaata attgttggag CD 251 actcaaatga tggatatgca agcatgataa cttatatgct gttctatatc CD 301 tccatgaatc taggaacttt tgcttgcatt gtattatttg gtctacgtac CD 351 cggaactgat aacattcgag attatgcagg attatacaca aaagatcctt CD 401 ttttggctct ctctttagcc ctatgtctct tatccctagg aggtcttcct CD 451 ccactagcag gttttttcgg aaaactc FT EDITED CDNA CD 1 tctcccactc cagtcgttgT ctttctttct gttacttcga aagtagctgc CD 51 ttcagcttca gccactcgaa ttttcgatat tcctttttat ttctcatcaa CD 101 acgaatggca tcttcttctg gaaatcctag ctattcttag catgatattg CD 151 ggaaatctca ttgctattac tcaaacaagc atgaaacgta tgcttgcata CD 201 ttcgtccata ggccaaatcg gatatgtaat tattggaata attgttggag CD 251 actcaaatga tggatatgca agcatgataa cttatatgct gttctatatc CD 301 tccatgaatc taggaacttt tgcttgcatt gtattatttg gtctacgtac CD 351 cggaactgat aacattcgag attatgcagg attatacaca aaagatcctt CD 401 ttttggctct ctctttagcc ctatgtctct tatccctagg aggtcttcct CD 451 ccactagcag gttttttcgg aaaactc SQ SEQUENCE 159 AA; SPTPVVVFLS VTSKVAASAS ATRIFDIPFY FSSNEWHLLL EILAILSMIL GNLIAITQTS MKRMLAYSSI GQIGYVIIGI IVGDSNDGYA SMITYMLFYI SMNLGTFACI VLFGLRTGTD NIRDYAGLYT KDPFLALSLA LCLLSLGGLP PLAGFFGKL // ID AB098247_1 STANDARD; PRT; 233 AA. AC AB098247; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhB gene for NADH dehydrogenase ND 2 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77587.1 FT PROTEIN_NAME : NADH dehydrogenase ND 2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 697 FT DIRECTIONS : positive FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 130 P(cCa) -> L(cTa) FT EDITING : 170 H(Cat) -> Y(Tat) FT EDITING : 178 S(tCa) -> L(tTa) FT EDITING : 220 P(cCa) -> L(cTa) FT EDITING : 223 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 697 NT; CD 1 ttcgatggaa gtttgatttt cccagaatgt atcctaattt ttggcctaat CD 51 tcttcttctg atgatcgatt Caacctctga tcaaaaagat ataccttggt CD 101 tatatttcat ctcttcaaca agtttagtaa tgagcataac ggccctattg CD 151 ttccgatgga gagaagaacc tatgattagc ttttcgggaa atttccaaac CD 201 gaacaatttc aacgaaatct ttcaatttct tattttacta tgttcaactc CD 251 tatgtattcc tctatccgta gagtacattg aatgtacaga aatggctata CD 301 acagagtttc tcttattcgt attaacagct actctagggg gaatgttttt CD 351 atgcggtgct aacgatttaa taactatctt tgtagcccCa gaatgtttca CD 401 gtttatgctc ctacctatta tctggatata ccaagaaaga tgtacggtct CD 451 aatgaggcta ctatgaaata tttactcatg ggtggggcaa gctcttctat CD 501 tctggttCat ggtttctctt ggctatatgg ttCatccggg ggagagattg CD 551 agcttcaaga aatagtaaac ggtcttatca atacacaaat gtataactcc CD 601 ccaggaattt caattgcgct catattcatt accgtaggaa ttgggttcaa CD 651 gctttcccCa gccccttCtc atcaatggac tcctgacgta tacgaag FT EDITED CDNA CD 1 ttcgatggaa gtttgatttt cccagaatgt atcctaattt ttggcctaat CD 51 tcttcttctg atgatcgatt Taacctctga tcaaaaagat ataccttggt CD 101 tatatttcat ctcttcaaca agtttagtaa tgagcataac ggccctattg CD 151 ttccgatgga gagaagaacc tatgattagc ttttcgggaa atttccaaac CD 201 gaacaatttc aacgaaatct ttcaatttct tattttacta tgttcaactc CD 251 tatgtattcc tctatccgta gagtacattg aatgtacaga aatggctata CD 301 acagagtttc tcttattcgt attaacagct actctagggg gaatgttttt CD 351 atgcggtgct aacgatttaa taactatctt tgtagcccTa gaatgtttca CD 401 gtttatgctc ctacctatta tctggatata ccaagaaaga tgtacggtct CD 451 aatgaggcta ctatgaaata tttactcatg ggtggggcaa gctcttctat CD 501 tctggttTat ggtttctctt ggctatatgg ttTatccggg ggagagattg CD 551 agcttcaaga aatagtaaac ggtcttatca atacacaaat gtataactcc CD 601 ccaggaattt caattgcgct catattcatt accgtaggaa ttgggttcaa CD 651 gctttcccTa gccccttTtc atcaatggac tcctgacgta tacgaag SQ SEQUENCE 233 AA; FDGSLIFPEC ILIFGLILLL MIDLTSDQKD IPWLYFISST SLVMSITALL FRWREEPMIS FSGNFQTNNF NEIFQFLILL CSTLCIPLSV EYIECTEMAI TEFLLFVLTA TLGGMFLCGA NDLITIFVAL ECFSLCSYLL SGYTKKDVRS NEATMKYLLM GGASSSILVY GFSWLYGLSG GEIELQEIVN GLINTQMYNS PGISIALIFI TVGIGFKLSL APFHQWTPDV YEX // ID AB098248_1 STANDARD; PRT; 178 AA. AC AB098248; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhA gene for NADH dehydrogenase ND 1 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : ndhA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77588.1 FT PROTEIN_NAME : NADH dehydrogenase ND 1 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 534 FT DIRECTIONS : positive FT EDITING : 3 S(tCa) -> L(tTa) FT EDITING : 172 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 534 NT; CD 1 aacagttCaa gtacagttga tatagtggaa gcgcagtcaa aatatggttt CD 51 ttgggggtgg aatttgtggc gtcaacccat cgggtttatc gtttttctaa CD 101 tttcttctct agccgagtgt gaaagattac cttttgattt accagaagca CD 151 gaagaagaat tagtagcagg gtatcaaacc gaatattcag gtatcaaatt CD 201 tggtttattt tacattgctt catatctgaa tctactagtt tcttcattat CD 251 ttgtaacagt tctttacttg ggaggttgga atctttctat tccgtacata CD 301 tttgttcctg agctatttgg cataaataaa aagggtaaag tctttggcac CD 351 actaattggt atctttatca cattagccaa aacttatttg tttttgttca CD 401 ttcctattgc aacaagatgg actttaccga ggctgagaat ggaccaacta CD 451 ttaaatcttg ggtggaaatt tcttttacct atttctctag gtaatctatt CD 501 attgacaact tcgtCccaac ttctttcact gtaa FT EDITED CDNA CD 1 aacagttTaa gtacagttga tatagtggaa gcgcagtcaa aatatggttt CD 51 ttgggggtgg aatttgtggc gtcaacccat cgggtttatc gtttttctaa CD 101 tttcttctct agccgagtgt gaaagattac cttttgattt accagaagca CD 151 gaagaagaat tagtagcagg gtatcaaacc gaatattcag gtatcaaatt CD 201 tggtttattt tacattgctt catatctgaa tctactagtt tcttcattat CD 251 ttgtaacagt tctttacttg ggaggttgga atctttctat tccgtacata CD 301 tttgttcctg agctatttgg cataaataaa aagggtaaag tctttggcac CD 351 actaattggt atctttatca cattagccaa aacttatttg tttttgttca CD 401 ttcctattgc aacaagatgg actttaccga ggctgagaat ggaccaacta CD 451 ttaaatcttg ggtggaaatt tcttttacct atttctctag gtaatctatt CD 501 attgacaact tcgtTccaac ttctttcact gtaa SQ SEQUENCE 178 AA; NSLSTVDIVE AQSKYGFWGW NLWRQPIGFI VFLISSLAEC ERLPFDLPEA EEELVAGYQT EYSGIKFGLF YIASYLNLLV SSLFVTVLYL GGWNLSIPYI FVPELFGINK KGKVFGTLIG IFITLAKTYL FLFIPIATRW TLPRLRMDQL LNLGWKFLLP ISLGNLLLTT SFQLLSL* // ID AB098249_1 STANDARD; PRT; 174 AA. AC AB098249; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhA gene for NADH dehydrogenese ND 1 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77589.1 FT PROTEIN_NAME : NADH dehydrogenese ND 1 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 521 FT DIRECTIONS : positive FT EDITING : 108 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 521 NT; CD 1 gaaatagaaa ctatcaattc tttttccaaa ttggaatcct taaaagaagt CD 51 ctatgggatc atatggatgc ttttccctat ttttactctt gtattaggaa CD 101 tcacaatagg tgtactagta attgtttggt tagaaagaga aatatctgca CD 151 ggaatacaac aacgtatcgg acctgaatat gctggccctt taggaattct CD 201 tcaagctcta gcagatggga caaaactact tttgaaagag aaccttattc CD 251 catctacagg agatactcgt ttattcagta tcggaccatc catagcagta CD 301 atatccatct ttctaagtta ttCagtaatt ccttttggtg atcaccttgt CD 351 tctagccgat cttagtattg gtgttttttt ctggattgcc atttcaagta CD 401 ttgctcccgt tggacttctt atgtcgggat atggatcaaa taataaatat CD 451 tcctttttag gtggtctacg agcagctgct caatcaatta gttatgaaat CD 501 accattagct ctatgtgtgt t FT EDITED CDNA CD 1 gaaatagaaa ctatcaattc tttttccaaa ttggaatcct taaaagaagt CD 51 ctatgggatc atatggatgc ttttccctat ttttactctt gtattaggaa CD 101 tcacaatagg tgtactagta attgtttggt tagaaagaga aatatctgca CD 151 ggaatacaac aacgtatcgg acctgaatat gctggccctt taggaattct CD 201 tcaagctcta gcagatggga caaaactact tttgaaagag aaccttattc CD 251 catctacagg agatactcgt ttattcagta tcggaccatc catagcagta CD 301 atatccatct ttctaagtta ttTagtaatt ccttttggtg atcaccttgt CD 351 tctagccgat cttagtattg gtgttttttt ctggattgcc atttcaagta CD 401 ttgctcccgt tggacttctt atgtcgggat atggatcaaa taataaatat CD 451 tcctttttag gtggtctacg agcagctgct caatcaatta gttatgaaat CD 501 accattagct ctatgtgtgt t SQ SEQUENCE 174 AA; EIETINSFSK LESLKEVYGI IWMLFPIFTL VLGITIGVLV IVWLEREISA GIQQRIGPEY AGPLGILQAL ADGTKLLLKE NLIPSTGDTR LFSIGPSIAV ISIFLSYLVI PFGDHLVLAD LSIGVFFWIA ISSIAPVGLL MSGYGSNNKY SFLGGLRAAA QSISYEIPLA LCVX // ID AB098250_1 STANDARD; PRT; 49 AA. AC AB098250; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis atpF gene for ATP synthase I subunit, OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : atpF FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77590.1 FT PROTEIN_NAME : ATP synthase I subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 145 FT DIRECTIONS : positive FT EDITING : 31 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 145 NT; CD 1 atgaaaaacg taaccgattc tttcgtttct ttgggccact ggccatctgc CD 51 cgggagtttc gggtttaata ccgatatttt agcaacaaat cCaataaatc CD 101 taagtgtagt gcttggtgta ttgatttttt ttggaaaggg agtgt FT EDITED CDNA CD 1 atgaaaaacg taaccgattc tttcgtttct ttgggccact ggccatctgc CD 51 cgggagtttc gggtttaata ccgatatttt agcaacaaat cTaataaatc CD 101 taagtgtagt gcttggtgta ttgatttttt ttggaaaggg agtgt SQ SEQUENCE 49 AA; MKNVTDSFVS LGHWPSAGSF GFNTDILATN LINLSVVLGV LIFFGKGVX // ID AB098251_1 STANDARD; PRT; 123 AA. AC AB098251; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis atpA gene for ATP synthase alpha subunit, OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : atpA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77591.1 FT PROTEIN_NAME : ATP synthase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 369 FT DIRECTIONS : positive FT EDITING : 73 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 369 NT; CD 1 gtaatatgtg tttatgtagc tattgggcaa aaagcatctt ctgtggccca CD 51 ggtcgtaact actttacagg aaaggggagc gatggaatac actattgtgg CD 101 tagccgaaac ggcagattcc cctgctacat tacaatacct tgctccttat CD 151 acaggagcag ctctggctga atattttatg tatcgtgaac gacacacttt CD 201 aatcatttat gatgatcCct ccaaacaagc gcaagcttat cgccaaatgt CD 251 ctcttctatt acgaagaccg cccggtcgtg aagcttatcc aggagatgtt CD 301 ttttatttgc attcacgcct tttggaaaga gccgctaaat taagttctag CD 351 tttaggtgaa ggaagtatg FT EDITED CDNA CD 1 gtaatatgtg tttatgtagc tattgggcaa aaagcatctt ctgtggccca CD 51 ggtcgtaact actttacagg aaaggggagc gatggaatac actattgtgg CD 101 tagccgaaac ggcagattcc cctgctacat tacaatacct tgctccttat CD 151 acaggagcag ctctggctga atattttatg tatcgtgaac gacacacttt CD 201 aatcatttat gatgatcTct ccaaacaagc gcaagcttat cgccaaatgt CD 251 ctcttctatt acgaagaccg cccggtcgtg aagcttatcc aggagatgtt CD 301 ttttatttgc attcacgcct tttggaaaga gccgctaaat taagttctag CD 351 tttaggtgaa ggaagtatg SQ SEQUENCE 123 AA; VICVYVAIGQ KASSVAQVVT TLQERGAMEY TIVVAETADS PATLQYLAPY TGAALAEYFM YRERHTLIIY DDLSKQAQAY RQMSLLLRRP PGREAYPGDV FYLHSRLLER AAKLSSSLGE GSM // ID AB158193_1 STANDARD; PRT; 563 AA. AC AB158193; DT Tue Jul 21 07:00:09 2009 DE Hordeum vulgare subsp. vulgare mitochondrial rps2 gene for OS mitochondrion Hordeum vulgare subsp. vulgare (domesticated barley) OC Hordeum vulgare subsp. vulgare RN [1] RL Theor. Appl. Genet. 110 (6), 995-1002 (2005) RL PUBMED 15754209 FT Full length CDS FT GENE : rps2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAD61010.1 FT PROTEIN_NAME : ribosomal protein S2 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1263 - 2951 FT DIRECTIONS : positive FT EDITING : 60 P(cCc) -> L(cTc) FT EDITING : 67 S(tCc) -> F(tTc) FT EDITING : 85 A(gCg) -> V(gTg) FT EDITING : 162 P(cCa) -> L(cTa) FT EDITING : 186 P(Cct) -> S(Tct) FT EDITING : 194 R(Cgt) -> C(Tgt) FT EDITING : 196 S(tCg) -> L(tTg) FT EDITING : 537 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 1689 NT; CD 1 atgacaatgc tttcgatagt ctgtactaaa ttactttgta cgaatgcaca CD 51 tctcggccgt cgggtagctg atcaccattt caaagtctat atccgtggtt CD 101 caagaaatgg aattgctatt ctcgattcag acaagacact gatttgttta CD 151 cgaaacgctc ttcattttat aggatctcCc attcgtcaaa aaggccgttC CD 201 cttcttttta aagaccaatc atttatttat ttatgagata acggaagaaa CD 251 tggCgagcta tttaagaagc tatttaagaa atgtgaattc tcattgtttc CD 301 gatgattctc aatggaagat cggggcgttt ttgaccaatt cttttgcaaa CD 351 taaaaaaaaa ttccgttcaa gaaagaagaa gatcaatttt gggttgaacc CD 401 aacaacctga ttgtgtggtt attctgaatg cagatagaaa gtcttcggtc CD 451 atactggaag ctgatcgatc acaaatacct attcCatcct tagttgattc CD 501 tacgatccca tgggaatcct ataaaagaat cacttatccc atcccagcga CD 551 atgatCctat acagttcgta tatctatttC gtcattCgat catgaaaaca CD 601 gtgattctta aacagaatgc gattagtaga gagacaccac catctcttag CD 651 cagagtcact tttaagacgg tgtccactgg catgcactcc acctcttcac CD 701 cccgaggaag aaaagtgtct cttgtgagac tgaaccccat gagaaccgtt CD 751 tcttcggctg tctttgaatt attagcggca gcccagccct tctttaccaa CD 801 tactactgag agtctacccc agccacaagg gggggctgct caaatagttc CD 851 aggagacgcc agccccacaa gggttcacgg agctccaacc tatacaaggg CD 901 ccagctatac ctttaagttt gcaactcgat tttcaatccc aagctcattt CD 951 tcttgactgt atgacaagac atgcaattgg ggagaataat atgttttata CD 1001 aaattcctgg tcgtctgcat aacccaatat tagaaaatta tggaggtgca CD 1051 ggtccaagta cttcgactcc accgatatta gaaaattatg gaggtgcagg CD 1101 cccaagtact tcgaatccac caatggattt atctccaacc atggatatgg CD 1151 atgtatctcc taccattcat gtacctctta gcaaagagca aatctatttc CD 1201 aatttggtgc atcttgatgc cactaggaaa acctcgggat tatcccaaga CD 1251 gaagcttatg acactagtag agataattta tattaagaaa tcgtcaatac CD 1301 tagcggagct aatggataaa tctggccctc aaaattgcca catcctttgg CD 1351 aatacggatg gtgctggcaa tgccatccga aaaggaaacg gagaagaata CD 1401 tgatgtaaaa accttaaggg agatccttaa aagtttgcga agtaatgagg CD 1451 aattacgtaa aagtcattat ttggggggaa tttggaaaag aaggatttca CD 1501 gacctcccta aagccaaatt aaaactttta agagtggaag atatacccgg CD 1551 gggggatata cgagattctt tgacccagag aatcgggcct gactgggata CD 1601 aattagattC gatgaaccag aaaaacctct ggactgagtg gaaagacttt CD 1651 gagaacccga ccaacctccg gaatcccgag gactggtaa FT EDITED CDNA CD 1 atgacaatgc tttcgatagt ctgtactaaa ttactttgta cgaatgcaca CD 51 tctcggccgt cgggtagctg atcaccattt caaagtctat atccgtggtt CD 101 caagaaatgg aattgctatt ctcgattcag acaagacact gatttgttta CD 151 cgaaacgctc ttcattttat aggatctcTc attcgtcaaa aaggccgttT CD 201 cttcttttta aagaccaatc atttatttat ttatgagata acggaagaaa CD 251 tggTgagcta tttaagaagc tatttaagaa atgtgaattc tcattgtttc CD 301 gatgattctc aatggaagat cggggcgttt ttgaccaatt cttttgcaaa CD 351 taaaaaaaaa ttccgttcaa gaaagaagaa gatcaatttt gggttgaacc CD 401 aacaacctga ttgtgtggtt attctgaatg cagatagaaa gtcttcggtc CD 451 atactggaag ctgatcgatc acaaatacct attcTatcct tagttgattc CD 501 tacgatccca tgggaatcct ataaaagaat cacttatccc atcccagcga CD 551 atgatTctat acagttcgta tatctatttT gtcattTgat catgaaaaca CD 601 gtgattctta aacagaatgc gattagtaga gagacaccac catctcttag CD 651 cagagtcact tttaagacgg tgtccactgg catgcactcc acctcttcac CD 701 cccgaggaag aaaagtgtct cttgtgagac tgaaccccat gagaaccgtt CD 751 tcttcggctg tctttgaatt attagcggca gcccagccct tctttaccaa CD 801 tactactgag agtctacccc agccacaagg gggggctgct caaatagttc CD 851 aggagacgcc agccccacaa gggttcacgg agctccaacc tatacaaggg CD 901 ccagctatac ctttaagttt gcaactcgat tttcaatccc aagctcattt CD 951 tcttgactgt atgacaagac atgcaattgg ggagaataat atgttttata CD 1001 aaattcctgg tcgtctgcat aacccaatat tagaaaatta tggaggtgca CD 1051 ggtccaagta cttcgactcc accgatatta gaaaattatg gaggtgcagg CD 1101 cccaagtact tcgaatccac caatggattt atctccaacc atggatatgg CD 1151 atgtatctcc taccattcat gtacctctta gcaaagagca aatctatttc CD 1201 aatttggtgc atcttgatgc cactaggaaa acctcgggat tatcccaaga CD 1251 gaagcttatg acactagtag agataattta tattaagaaa tcgtcaatac CD 1301 tagcggagct aatggataaa tctggccctc aaaattgcca catcctttgg CD 1351 aatacggatg gtgctggcaa tgccatccga aaaggaaacg gagaagaata CD 1401 tgatgtaaaa accttaaggg agatccttaa aagtttgcga agtaatgagg CD 1451 aattacgtaa aagtcattat ttggggggaa tttggaaaag aaggatttca CD 1501 gacctcccta aagccaaatt aaaactttta agagtggaag atatacccgg CD 1551 gggggatata cgagattctt tgacccagag aatcgggcct gactgggata CD 1601 aattagattT gatgaaccag aaaaacctct ggactgagtg gaaagacttt CD 1651 gagaacccga ccaacctccg gaatcccgag gactggtaa SQ SEQUENCE 563 AA; MTMLSIVCTK LLCTNAHLGR RVADHHFKVY IRGSRNGIAI LDSDKTLICL RNALHFIGSL IRQKGRFFFL KTNHLFIYEI TEEMVSYLRS YLRNVNSHCF DDSQWKIGAF LTNSFANKKK FRSRKKKINF GLNQQPDCVV ILNADRKSSV ILEADRSQIP ILSLVDSTIP WESYKRITYP IPANDSIQFV YLFCHLIMKT VILKQNAISR ETPPSLSRVT FKTVSTGMHS TSSPRGRKVS LVRLNPMRTV SSAVFELLAA AQPFFTNTTE SLPQPQGGAA QIVQETPAPQ GFTELQPIQG PAIPLSLQLD FQSQAHFLDC MTRHAIGENN MFYKIPGRLH NPILENYGGA GPSTSTPPIL ENYGGAGPST SNPPMDLSPT MDMDVSPTIH VPLSKEQIYF NLVHLDATRK TSGLSQEKLM TLVEIIYIKK SSILAELMDK SGPQNCHILW NTDGAGNAIR KGNGEEYDVK TLREILKSLR SNEELRKSHY LGGIWKRRIS DLPKAKLKLL RVEDIPGGDI RDSLTQRIGP DWDKLDLMNQ KNLWTEWKDF ENPTNLRNPE DW* // ID AB193121_2 STANDARD; PRT; 342 AA. AC AB193121; DT Tue Jul 21 07:00:09 2009 DE Takakia lepidozioides rps11, rpoA, petD genes for ribosomal protein OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : rpoA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAD60944.2 FT PROTEIN_NAME : DNA-dependent RNA polymerase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 73 - 1098 FT DIRECTIONS : positive FT EDITING : 35 P(Cct) -> S(Tct) FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 67 S(tCc) -> F(tTc) FT EDITING : 88 S(tCa) -> L(tTa) FT EDITING : 91 S(tCa) -> L(tTa) FT EDITING : 123 S(tCa) -> L(tTa) FT EDITING : 136 T(aCa) -> I(aTa) FT EDITING : 145 S(tCg) -> L(tTg) FT EDITING : 170 S(tCt) -> F(tTt) FT EDITING : 172 A(gCa) -> V(gTa) FT EDITING : 182 A(gCa) -> V(gTa) FT EDITING : 288 P(cCC) -> L(cTT) FT EDITING : 299 P(cCt) -> L(cTt) FT EDITING : 325 S(tCa) -> L(tTa) FT EDITING : 342 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1026 NT; CD 1 atgattcgag atgagatacc gatctccgct caggtactac agtggaggtg CD 51 cgtggaatct agagtagata gtgcgcgtct tcattatagt cgattcgcca CD 101 taCctccatt tagaagcggt caagccagta cagtcggaat tgctatgcgc CD 151 agagcctCac ttggagaggt ggaaggaacg tgtatcacat gtgcagaatC CD 201 caagagagtg acacatgaat attctacaat attaggcatt caagaatcgg CD 251 tacatgacgt ttCaattaac tCaggagaaa ttgtacttag aagcgattct CD 301 tatgaaacac aaaaagcgtt tatatctatt cttggaccta aaaaggtaac CD 351 tgctcaagac atcatatCac cgccttccgt caaaataatt gatactacac CD 401 aatataCagc caccgttact aaagcaattc attCggatat tgaattgaag CD 451 attgagaaag attttggata ccgtatagag gatccaataa aatccgcaga CD 501 tggaaattCt cctgCagatg ccgtgtttat gcctattcga aacgCaaatt CD 551 atagtgttca ttctttcgaa aacggaaacg agacacaaga aatacttttt CD 601 cttgaaatat ggactaatgg aagtgtgact cccaaagaag cactttatga CD 651 agcttctcga agtttaataa atttattcat tcctttttta catgcagaaa CD 701 agaaagaatt catttatgga ttgaaaaata catatgaatc taatatgtct CD 751 tacttctcct ctccctcctt atcagccgat atagacgaaa tgacaaaagg CD 801 agttactttt aaacatatat tcattgacca attggagtta cccgctagag CD 851 cttataactg tcCCaaaaga gttaatgcac atacaatatc agatcCttta CD 901 aattatagtc aagatgattt aatgaaaata aaaaactttg gaaagaaatc CD 951 cgtggaacag gtattggaag cttCacaaaa acgtttttcg ataaatctac CD 1001 caaaaaacaa gctccacttc catCaa FT EDITED CDNA CD 1 atgattcgag atgagatacc gatctccgct caggtactac agtggaggtg CD 51 cgtggaatct agagtagata gtgcgcgtct tcattatagt cgattcgcca CD 101 taTctccatt tagaagcggt caagccagta cagtcggaat tgctatgcgc CD 151 agagcctTac ttggagaggt ggaaggaacg tgtatcacat gtgcagaatT CD 201 caagagagtg acacatgaat attctacaat attaggcatt caagaatcgg CD 251 tacatgacgt ttTaattaac tTaggagaaa ttgtacttag aagcgattct CD 301 tatgaaacac aaaaagcgtt tatatctatt cttggaccta aaaaggtaac CD 351 tgctcaagac atcatatTac cgccttccgt caaaataatt gatactacac CD 401 aatataTagc caccgttact aaagcaattc attTggatat tgaattgaag CD 451 attgagaaag attttggata ccgtatagag gatccaataa aatccgcaga CD 501 tggaaattTt cctgTagatg ccgtgtttat gcctattcga aacgTaaatt CD 551 atagtgttca ttctttcgaa aacggaaacg agacacaaga aatacttttt CD 601 cttgaaatat ggactaatgg aagtgtgact cccaaagaag cactttatga CD 651 agcttctcga agtttaataa atttattcat tcctttttta catgcagaaa CD 701 agaaagaatt catttatgga ttgaaaaata catatgaatc taatatgtct CD 751 tacttctcct ctccctcctt atcagccgat atagacgaaa tgacaaaagg CD 801 agttactttt aaacatatat tcattgacca attggagtta cccgctagag CD 851 cttataactg tcTTaaaaga gttaatgcac atacaatatc agatcTttta CD 901 aattatagtc aagatgattt aatgaaaata aaaaactttg gaaagaaatc CD 951 cgtggaacag gtattggaag cttTacaaaa acgtttttcg ataaatctac CD 1001 caaaaaacaa gctccacttc catTaa SQ SEQUENCE 342 AA; MIRDEIPISA QVLQWRCVES RVDSARLHYS RFAISPFRSG QASTVGIAMR RALLGEVEGT CITCAEFKRV THEYSTILGI QESVHDVLIN LGEIVLRSDS YETQKAFISI LGPKKVTAQD IILPPSVKII DTTQYIATVT KAIHLDIELK IEKDFGYRIE DPIKSADGNF PVDAVFMPIR NVNYSVHSFE NGNETQEILF LEIWTNGSVT PKEALYEASR SLINLFIPFL HAEKKEFIYG LKNTYESNMS YFSSPSLSAD IDEMTKGVTF KHIFIDQLEL PARAYNCLKR VNAHTISDLL NYSQDDLMKI KNFGKKSVEQ VLEALQKRFS INLPKNKLHF H* // ID AB237912_44 STANDARD; PRT; 39 AA. AC AB237912; DT Tue Jul 21 07:00:11 2009 DE Nicotiana sylvestris chloroplast DNA, complete sequence. OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Genet. Genomics 275 (4), 367-373 (2006) RL PUBMED 16435119 FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE46668.1 FT PROTEIN_NAME : PSII L-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 66613 - 66729 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AB237912_90 STANDARD; PRT; 501 AA. AC AB237912; DT Tue Jul 21 07:00:11 2009 DE Nicotiana sylvestris chloroplast DNA, complete sequence. OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Genet. Genomics 275 (4), 367-373 (2006) RL PUBMED 16435119 FT Full length CDS FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE46714.1 FT PROTEIN_NAME : NADH dehydrogenase ND4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 117523 - 119025 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 aCgaattatt ttccttggtt aacaataatt gtagtttttc caatatttgc CD 51 gggttcctta attttctttc ttccccataa aggaaatagg gtaattaggt CD 101 ggtatacgat atgtatatgt attttagaac tccttctaac gacttatgca CD 151 ttttgttatc atttccaatc ggatgatcca ttaatccaac tagtggagga CD 201 ttataaatgg atcaattttt ttgatttcca ttggagatta ggaatagatg CD 251 gactttctat aggacccatt ttattaacag gatttatcac tactttagct CD 301 actttagcgg cttggccagt tactcgagat tctcgattat tccattttct CD 351 catgttagca atgtacagtg gtcaaattgg atcattttcg tctcgggacc CD 401 ttttactttt tttcatcatg tgggagttag aattaattcc tgtttatcta CD 451 cttctatgca tgtggggagg aaagaaacgt ctgtactcag ctacaaaatt CD 501 tattttgtac acggcggggg gttctgtttt tctcttaatg ggagttttgg CD 551 gtcttgcttt atatggttct aatgaaccaa cattaaattt tgaaacatca CD 601 gttaatcagt catatcctgt ggttttagaa ataatattct atattggatt CD 651 ttttattgct tttgctgtca aatcgcccat tatcccccta cacacatggt CD 701 taccagatac ccatggagaa gcacattaca gtacttgtat gcttctagcc CD 751 ggaattttat taaaaatggg agcgtatgga ttaattcgaa tcaatatgga CD 801 attattacct catgcccatt ctatattttc tccttggttg atgataatag CD 851 gtacaataca aataatctat gcagctttaa catctcttgg ccaacggaat CD 901 ttaaaaaaaa gaatagccta ttcctctgtc tctcatatgg gtttcataat CD 951 tataggaatt agttctctaa ccgacacggg acttaatgga gcccttttac CD 1001 aaataatatc tcatggattt attggtgctg cacttttttt cttggcggga CD 1051 acgacttatg atagaatccg ccttgtttat cttgacgaaa tgggcggaat CD 1101 agctattcca atgccaaaaa tgttcacgat gttcagtagc ttttcgatgg CD 1151 cttcccttgc attaccaggt atgagtggtt ttgttgccga attgatagta CD 1201 ttttttggaa taattaccgg ccaaaaatat cttttaattc caaaaatact CD 1251 aattactttt gtaatggcaa ttggaatgat attaactcct atttattcat CD 1301 tatctatgtc acgccagatg ttctatggat acaagctatt taatgccccg CD 1351 aaggattctt tttttgattc tggaccgcga gagttatttc tttcgatctc CD 1401 catcttttta cccgtaatag gtattggtat atacccggat ttcgttcttt CD 1451 cattagcagt tgacaaggtc gaagttattc tatctaattt tttttataga CD 1501 taa FT EDITED CDNA CD 1 aTgaattatt ttccttggtt aacaataatt gtagtttttc caatatttgc CD 51 gggttcctta attttctttc ttccccataa aggaaatagg gtaattaggt CD 101 ggtatacgat atgtatatgt attttagaac tccttctaac gacttatgca CD 151 ttttgttatc atttccaatc ggatgatcca ttaatccaac tagtggagga CD 201 ttataaatgg atcaattttt ttgatttcca ttggagatta ggaatagatg CD 251 gactttctat aggacccatt ttattaacag gatttatcac tactttagct CD 301 actttagcgg cttggccagt tactcgagat tctcgattat tccattttct CD 351 catgttagca atgtacagtg gtcaaattgg atcattttcg tctcgggacc CD 401 ttttactttt tttcatcatg tgggagttag aattaattcc tgtttatcta CD 451 cttctatgca tgtggggagg aaagaaacgt ctgtactcag ctacaaaatt CD 501 tattttgtac acggcggggg gttctgtttt tctcttaatg ggagttttgg CD 551 gtcttgcttt atatggttct aatgaaccaa cattaaattt tgaaacatca CD 601 gttaatcagt catatcctgt ggttttagaa ataatattct atattggatt CD 651 ttttattgct tttgctgtca aatcgcccat tatcccccta cacacatggt CD 701 taccagatac ccatggagaa gcacattaca gtacttgtat gcttctagcc CD 751 ggaattttat taaaaatggg agcgtatgga ttaattcgaa tcaatatgga CD 801 attattacct catgcccatt ctatattttc tccttggttg atgataatag CD 851 gtacaataca aataatctat gcagctttaa catctcttgg ccaacggaat CD 901 ttaaaaaaaa gaatagccta ttcctctgtc tctcatatgg gtttcataat CD 951 tataggaatt agttctctaa ccgacacggg acttaatgga gcccttttac CD 1001 aaataatatc tcatggattt attggtgctg cacttttttt cttggcggga CD 1051 acgacttatg atagaatccg ccttgtttat cttgacgaaa tgggcggaat CD 1101 agctattcca atgccaaaaa tgttcacgat gttcagtagc ttttcgatgg CD 1151 cttcccttgc attaccaggt atgagtggtt ttgttgccga attgatagta CD 1201 ttttttggaa taattaccgg ccaaaaatat cttttaattc caaaaatact CD 1251 aattactttt gtaatggcaa ttggaatgat attaactcct atttattcat CD 1301 tatctatgtc acgccagatg ttctatggat acaagctatt taatgccccg CD 1351 aaggattctt tttttgattc tggaccgcga gagttatttc tttcgatctc CD 1401 catcttttta cccgtaatag gtattggtat atacccggat ttcgttcttt CD 1451 cattagcagt tgacaaggtc gaagttattc tatctaattt tttttataga CD 1501 taa SQ SEQUENCE 501 AA; MNYFPWLTII VVFPIFAGSL IFFLPHKGNR VIRWYTICIC ILELLLTTYA FCYHFQSDDP LIQLVEDYKW INFFDFHWRL GIDGLSIGPI LLTGFITTLA TLAAWPVTRD SRLFHFLMLA MYSGQIGSFS SRDLLLFFIM WELELIPVYL LLCMWGGKKR LYSATKFILY TAGGSVFLLM GVLGLALYGS NEPTLNFETS VNQSYPVVLE IIFYIGFFIA FAVKSPIIPL HTWLPDTHGE AHYSTCMLLA GILLKMGAYG LIRINMELLP HAHSIFSPWL MIIGTIQIIY AALTSLGQRN LKKRIAYSSV SHMGFIIIGI SSLTDTGLNG ALLQIISHGF IGAALFFLAG TTYDRIRLVY LDEMGGIAIP MPKMFTMFSS FSMASLALPG MSGFVAELIV FFGIITGQKY LLIPKILITF VMAIGMILTP IYSLSMSRQM FYGYKLFNAP KDSFFDSGPR ELFLSISIFL PVIGIGIYPD FVLSLAVDKV EVILSNFFYR * // ID AB240139_44 STANDARD; PRT; 39 AA. AC AB240139; DT Tue Jul 21 07:00:11 2009 DE Nicotiana tomentosiformis chloroplast DNA, complete sequence. OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Genet. Genomics 275 (4), 367-373 (2006) RL PUBMED 16435119 FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE48018.1 FT PROTEIN_NAME : PSII L-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 66484 - 66600 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AB240139_89 STANDARD; PRT; 501 AA. AC AB240139; DT Tue Jul 21 07:00:11 2009 DE Nicotiana tomentosiformis chloroplast DNA, complete sequence. OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Genet. Genomics 275 (4), 367-373 (2006) RL PUBMED 16435119 FT Full length CDS FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE48063.1 FT PROTEIN_NAME : NADH dehydrogenase ND4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 117281 - 118783 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 aCgaattatt ttccttggtt aacaataatt gtagtttttc caatatttgc CD 51 gggttcctta attttctttc ttccccataa aggaaatagg gtaattaggt CD 101 ggtataccat atgtatatgt attttagaac tccttctaac aacttatgca CD 151 ttttgttatc atttccaatc ggatgatcca ttaatccaac tagtggagga CD 201 ttataaatgg atcaattttt ttgatttcca ttggagatta ggaatagatg CD 251 gactttctat aggacccatt ttattaacag gatttatcac tactttagct CD 301 actttagcgg cttggccaat tactcgagat tctcgattat tccattttct CD 351 catgttagca atgtacagtg gtcaaattgg atcattttcg tctcgggacc CD 401 ttttactttt tttcatcatg tgggagttag aattaattcc tgtttatcta CD 451 cttctatgca tgtggggagg aaagaaacgt ctgtactcag ctacaaaatt CD 501 tattttgtac acggcggggg gttctgtttt tctcttaatg ggagttttgg CD 551 gtgttgcttt atatggttct aatgaaccaa cattaaattt tgaaacatca CD 601 gttaatcagt catatcctgt ggttttagaa ataatattct atattggatt CD 651 ttttattgct tttgctgtca aatcgcccat tatcccccta cacacatggt CD 701 taccagatac ccatggagaa gcacattaca gtacttgtat gcttctagcc CD 751 ggaatcttat taaaaatggg agcgtatgga ttaattcgaa tcaatatgga CD 801 attattacct catgcccatt ctatattttc tccttggttg atgataatag CD 851 gtacaataca aataatctat gcagcttcaa catctcttgg ccaacggaat CD 901 ttaaaaaaaa gaatagccta ttcctctgtc tctcatatgg gtttcataat CD 951 tataggaatt agttctctaa ccgatacggg actaaatgga gcccttttac CD 1001 aaataatatc tcatggattt attggtgctg cacttttttt cttagcggga CD 1051 acgacttatg atagaatccg ccttgtttat cttgacgaaa tgggcggaat CD 1101 agctagtcca atgccaaaaa tgttcacgat gttcagtagc ttttcgatgg CD 1151 cttcccttgc attaccaggt atgagtggtt ttgttgccga attgatagta CD 1201 ttttttggaa taattaccgg ccaaaaatat cttttaattc caaaaatact CD 1251 aattactttt gtaatggcaa ttggaatgat attaactcct atttattcat CD 1301 tatctatgtc acgccagatg ttctatggat acaagctatt taatgccccg CD 1351 aaggattctt tttttgattc tggaccgcga gagttatttc tttcgatctc CD 1401 catcttttta cccgtaatag gtattggtat atacccagat ttcgttcttt CD 1451 cattagcagt tgacaaggtc gaagttattc tatctaattt tttttataga CD 1501 taa FT EDITED CDNA CD 1 aTgaattatt ttccttggtt aacaataatt gtagtttttc caatatttgc CD 51 gggttcctta attttctttc ttccccataa aggaaatagg gtaattaggt CD 101 ggtataccat atgtatatgt attttagaac tccttctaac aacttatgca CD 151 ttttgttatc atttccaatc ggatgatcca ttaatccaac tagtggagga CD 201 ttataaatgg atcaattttt ttgatttcca ttggagatta ggaatagatg CD 251 gactttctat aggacccatt ttattaacag gatttatcac tactttagct CD 301 actttagcgg cttggccaat tactcgagat tctcgattat tccattttct CD 351 catgttagca atgtacagtg gtcaaattgg atcattttcg tctcgggacc CD 401 ttttactttt tttcatcatg tgggagttag aattaattcc tgtttatcta CD 451 cttctatgca tgtggggagg aaagaaacgt ctgtactcag ctacaaaatt CD 501 tattttgtac acggcggggg gttctgtttt tctcttaatg ggagttttgg CD 551 gtgttgcttt atatggttct aatgaaccaa cattaaattt tgaaacatca CD 601 gttaatcagt catatcctgt ggttttagaa ataatattct atattggatt CD 651 ttttattgct tttgctgtca aatcgcccat tatcccccta cacacatggt CD 701 taccagatac ccatggagaa gcacattaca gtacttgtat gcttctagcc CD 751 ggaatcttat taaaaatggg agcgtatgga ttaattcgaa tcaatatgga CD 801 attattacct catgcccatt ctatattttc tccttggttg atgataatag CD 851 gtacaataca aataatctat gcagcttcaa catctcttgg ccaacggaat CD 901 ttaaaaaaaa gaatagccta ttcctctgtc tctcatatgg gtttcataat CD 951 tataggaatt agttctctaa ccgatacggg actaaatgga gcccttttac CD 1001 aaataatatc tcatggattt attggtgctg cacttttttt cttagcggga CD 1051 acgacttatg atagaatccg ccttgtttat cttgacgaaa tgggcggaat CD 1101 agctagtcca atgccaaaaa tgttcacgat gttcagtagc ttttcgatgg CD 1151 cttcccttgc attaccaggt atgagtggtt ttgttgccga attgatagta CD 1201 ttttttggaa taattaccgg ccaaaaatat cttttaattc caaaaatact CD 1251 aattactttt gtaatggcaa ttggaatgat attaactcct atttattcat CD 1301 tatctatgtc acgccagatg ttctatggat acaagctatt taatgccccg CD 1351 aaggattctt tttttgattc tggaccgcga gagttatttc tttcgatctc CD 1401 catcttttta cccgtaatag gtattggtat atacccagat ttcgttcttt CD 1451 cattagcagt tgacaaggtc gaagttattc tatctaattt tttttataga CD 1501 taa SQ SEQUENCE 501 AA; MNYFPWLTII VVFPIFAGSL IFFLPHKGNR VIRWYTICIC ILELLLTTYA FCYHFQSDDP LIQLVEDYKW INFFDFHWRL GIDGLSIGPI LLTGFITTLA TLAAWPITRD SRLFHFLMLA MYSGQIGSFS SRDLLLFFIM WELELIPVYL LLCMWGGKKR LYSATKFILY TAGGSVFLLM GVLGVALYGS NEPTLNFETS VNQSYPVVLE IIFYIGFFIA FAVKSPIIPL HTWLPDTHGE AHYSTCMLLA GILLKMGAYG LIRINMELLP HAHSIFSPWL MIIGTIQIIY AASTSLGQRN LKKRIAYSSV SHMGFIIIGI SSLTDTGLNG ALLQIISHGF IGAALFFLAG TTYDRIRLVY LDEMGGIASP MPKMFTMFSS FSMASLALPG MSGFVAELIV FFGIITGQKY LLIPKILITF VMAIGMILTP IYSLSMSRQM FYGYKLFNAP KDSFFDSGPR ELFLSISIFL PVIGIGIYPD FVLSLAVDKV EVILSNFFYR * // ID AB242560_5 STANDARD; PRT; 39 AA. AC AB242560; DT Tue Jul 21 07:00:11 2009 DE Beta vulgaris chloroplast trnP-CCA, trnW-UGG, petG, orf31, psbE, OS chloroplast Beta vulgaris OC Beta vulgaris RN [1] RL Published Only in Database (2005) FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE48707.1 FT PROTEIN_NAME : PSII L protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2744 - 2860 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctttattgg gggctattac tcatttttgt acttgctgtt ttattttcta CD 101 actatttttt caattaa FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctttattgg gggctattac tcatttttgt acttgctgtt ttattttcta CD 101 actatttttt caattaa SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AB254134_2 STANDARD; PRT; 509 AA. AC AB254134; DT Tue Jul 21 07:00:11 2009 DE Takakia lepidozioides chloroplast clpP, psbB, psbT, psbN, psbH, OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE94554.1 FT PROTEIN_NAME : photosystem II 47 kDa protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2215 - 3741 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 5 R(Cgg) -> W(Tgg) FT EDITING : 13 S(tCa) -> L(tTa) FT EDITING : 19 S(tCa) -> L(tTa) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 29 P(cCa) -> L(cTa) FT EDITING : 33 R(Cgg) -> W(Tgg) FT EDITING : 45 S(tCC) -> F(tTT) FT EDITING : 56 R(Cgg) -> W(Tgg) FT EDITING : 75 R(Cgg) -> W(Tgg) FT EDITING : 93 Y(taC) -> Y(taT) FT EDITING : 103 S(tCa) -> L(tTa) FT EDITING : 109 S(tCg) -> L(tTg) FT EDITING : 113 R(Cgg) -> W(Tgg) FT EDITING : 115 R(Cgg) -> W(Tgg) FT EDITING : 118 R(Cgg) -> W(Tgg) FT EDITING : 120 S(tCg) -> L(tTg) FT EDITING : 133 S(tCa) -> L(tTa) FT EDITING : 139 S(tCt) -> F(tTt) FT EDITING : 149 P(cCt) -> L(cTt) FT EDITING : 150 R(Cgt) -> C(Tgt) FT EDITING : 164 P(ccC) -> P(ccT) FT EDITING : 208 P(cCa) -> L(cTa) FT EDITING : 215 S(tCc) -> F(tTc) FT EDITING : 217 P(cCC) -> L(cTT) FT EDITING : 225 S(tCa) -> L(tTa) FT EDITING : 238 S(tCa) -> L(tTa) FT EDITING : 247 L(Ctc) -> F(Ttc) FT EDITING : 280 S(tCc) -> F(tTc) FT EDITING : 298 S(tCa) -> L(tTa) FT EDITING : 311 L(Ctt) -> F(Ttt) FT EDITING : 314 H(Cat) -> Y(Tat) FT EDITING : 330 T(aCg) -> M(aTg) FT EDITING : 340 R(Cgg) -> W(Tgg) FT EDITING : 346 F(ttC) -> F(ttT) FT EDITING : 362 P(CCt) -> F(TTt) FT EDITING : 363 S(tCt) -> F(tTt) FT EDITING : 366 L(Ctt) -> F(Ttt) FT EDITING : 370 S(tCg) -> L(tTg) FT EDITING : 383 S(tCc) -> F(tTc) FT EDITING : 406 P(cCg) -> L(cTg) FT EDITING : 430 S(tCt) -> F(tTt) FT EDITING : 432 S(tCC) -> F(tTT) FT EDITING : 443 S(tCt) -> F(tTt) FT EDITING : 453 S(tCt) -> F(tTt) FT EDITING : 461 P(cCc) -> L(cTc) FT EDITING : 463 S(tCt) -> F(tTt) FT EDITING : 468 R(Cgg) -> W(Tgg) FT EDITING : 474 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 1527 NT; CD 1 aCgggtttac ctCggtatcg cgtccatact gtcgtatCaa atgatcctgg CD 51 ccgttCaatt gccgtacatt Caatgcatac agctcCagtt tccggtCggg CD 101 ctggttctat ggctttatat gaattagctg tttCCgatcc atcggatccc CD 151 gttcttgatc caatgCggag acaaggtatg ttcgttatac ctttcatgac CD 201 tcgtttggga ataacaaagt ctCggggggg ctggagtatt actggagaaa CD 251 ctgtaactaa tgcgggtatt tggagttaCg aaggcgtggc tgcagtgcat CD 301 atcgtatCat ccggcttgtt attttCggcg gctatcCggc atCgggtcta CD 351 tCgggattCg gagttgttcc gtgatgaacg tacggggaaa ccttcttCag CD 401 atttgcctaa gatctCtgga attcatttat ttctctcagg agtccCtCgt CD 451 ttcggatttg gagcattcca tgtaacaggt ttattcggtc cCggaatatg CD 501 ggtatctgat ccttatggat tgactggaaa agtacaacct gtggctccag CD 551 cttggggagc tgagggtttc gatcctttcg ttccaggggg aatagcttct CD 601 caccatatcg cagcaggtat tcCaggtata ttagcaggtt tatCccaccC CD 651 Cagtgtccgt cccccccaac gatCatacaa gggattacgt atggggaatg CD 701 ttgaaactgt ttCatccagt agtattgctg ctgtatttCt cgccgctttc CD 751 gtcgttgccg gaactatgtg gtatggttcc gcagcaactc cagtagaatt CD 801 gtttggtcct actcgttatc aatgggatca aggattttCc caacaagaaa CD 851 tagatcgaag aattcgttcc agcgaagctg aaaaacttaa ttCatcagaa CD 901 gcttggtcca aaattcctga gaaattagct CtttatgatC atatcggtaa CD 951 taacccagct aaggggggat tatttagagc aggtgcgaCg gataatggag CD 1001 acggaatagc tgtcggtCgg ttaggtcatg ctgtcttCag agataaagag CD 1051 ggacatgagc tctttgtacg tcgtatgcct actCCttCtg aaactCttcc CD 1101 agtagtttCg gtagatgaag aaggaattgt tagagccgat gttccatCca CD 1151 gaagagcgga atcaaaatat agtgttgaac aagtaggtgt aactgttgaa CD 1201 ttttatggcg gtgaacCgga tggagtgagt tttagtgatc cagctacggt CD 1251 gaaaaagtat gccagacgtg ctcaattagg tgaaatttCt gaatCCgatc CD 1301 gcgctacttt aaaatcagat ggcgtttCtc gtagtagtcc gagaggttgg CD 1351 ttcacttCtg gtcatgccac atttgctctt cCcttctCtt ttggacatat CD 1401 tCggcatggt gctagaactt Cgtttagaga tgtatttgct ggtattgatc CD 1451 ctgatttaga tgctcaagtt gaattcgggg cattccaaaa actaggagat CD 1501 ccgactacta agagacaagt agtttaa FT EDITED CDNA CD 1 aTgggtttac ctTggtatcg cgtccatact gtcgtatTaa atgatcctgg CD 51 ccgttTaatt gccgtacatt Taatgcatac agctcTagtt tccggtTggg CD 101 ctggttctat ggctttatat gaattagctg tttTTgatcc atcggatccc CD 151 gttcttgatc caatgTggag acaaggtatg ttcgttatac ctttcatgac CD 201 tcgtttggga ataacaaagt ctTggggggg ctggagtatt actggagaaa CD 251 ctgtaactaa tgcgggtatt tggagttaTg aaggcgtggc tgcagtgcat CD 301 atcgtatTat ccggcttgtt attttTggcg gctatcTggc atTgggtcta CD 351 tTgggattTg gagttgttcc gtgatgaacg tacggggaaa ccttcttTag CD 401 atttgcctaa gatctTtgga attcatttat ttctctcagg agtccTtTgt CD 451 ttcggatttg gagcattcca tgtaacaggt ttattcggtc cTggaatatg CD 501 ggtatctgat ccttatggat tgactggaaa agtacaacct gtggctccag CD 551 cttggggagc tgagggtttc gatcctttcg ttccaggggg aatagcttct CD 601 caccatatcg cagcaggtat tcTaggtata ttagcaggtt tatTccaccT CD 651 Tagtgtccgt cccccccaac gatTatacaa gggattacgt atggggaatg CD 701 ttgaaactgt ttTatccagt agtattgctg ctgtatttTt cgccgctttc CD 751 gtcgttgccg gaactatgtg gtatggttcc gcagcaactc cagtagaatt CD 801 gtttggtcct actcgttatc aatgggatca aggattttTc caacaagaaa CD 851 tagatcgaag aattcgttcc agcgaagctg aaaaacttaa ttTatcagaa CD 901 gcttggtcca aaattcctga gaaattagct TtttatgatT atatcggtaa CD 951 taacccagct aaggggggat tatttagagc aggtgcgaTg gataatggag CD 1001 acggaatagc tgtcggtTgg ttaggtcatg ctgtcttTag agataaagag CD 1051 ggacatgagc tctttgtacg tcgtatgcct actTTttTtg aaactTttcc CD 1101 agtagtttTg gtagatgaag aaggaattgt tagagccgat gttccatTca CD 1151 gaagagcgga atcaaaatat agtgttgaac aagtaggtgt aactgttgaa CD 1201 ttttatggcg gtgaacTgga tggagtgagt tttagtgatc cagctacggt CD 1251 gaaaaagtat gccagacgtg ctcaattagg tgaaatttTt gaatTTgatc CD 1301 gcgctacttt aaaatcagat ggcgtttTtc gtagtagtcc gagaggttgg CD 1351 ttcacttTtg gtcatgccac atttgctctt cTcttctTtt ttggacatat CD 1401 tTggcatggt gctagaactt Tgtttagaga tgtatttgct ggtattgatc CD 1451 ctgatttaga tgctcaagtt gaattcgggg cattccaaaa actaggagat CD 1501 ccgactacta agagacaagt agtttaa SQ SEQUENCE 509 AA; MGLPWYRVHT VVLNDPGRLI AVHLMHTALV SGWAGSMALY ELAVFDPSDP VLDPMWRQGM FVIPFMTRLG ITKSWGGWSI TGETVTNAGI WSYEGVAAVH IVLSGLLFLA AIWHWVYWDL ELFRDERTGK PSLDLPKIFG IHLFLSGVLC FGFGAFHVTG LFGPGIWVSD PYGLTGKVQP VAPAWGAEGF DPFVPGGIAS HHIAAGILGI LAGLFHLSVR PPQRLYKGLR MGNVETVLSS SIAAVFFAAF VVAGTMWYGS AATPVELFGP TRYQWDQGFF QQEIDRRIRS SEAEKLNLSE AWSKIPEKLA FYDYIGNNPA KGGLFRAGAM DNGDGIAVGW LGHAVFRDKE GHELFVRRMP TFFETFPVVL VDEEGIVRAD VPFRRAESKY SVEQVGVTVE FYGGELDGVS FSDPATVKKY ARRAQLGEIF EFDRATLKSD GVFRSSPRGW FTFGHATFAL LFFFGHIWHG ARTLFRDVFA GIDPDLDAQV EFGAFQKLGD PTTKRQVV* // ID AB254134_3 STANDARD; PRT; 36 AA. AC AB254134; DT Tue Jul 21 07:00:11 2009 DE Takakia lepidozioides chloroplast clpP, psbB, psbT, psbN, psbH, OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbT FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE94555.1 FT PROTEIN_NAME : photosystem II T-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3874 - 3981 FT DIRECTIONS : positive FT EDITING : 6 H(Cat) -> Y(Tat) FT EDITING : 9 S(tCg) -> L(tTg) FT EDITING : 22 S(tCt) -> F(tTt) FT EDITING : 23 L(Ctc) -> F(Ttc) FT CODON_START : 1 CL CDNALEN 108 NT; CD 1 atggaagcat tggttCatac attttCgttg gtaggtactt taggaataat CD 51 tttttttgct atttCtCtcc gagaaccacc taaagttccg agcaaaggaa CD 101 aaaaataa FT EDITED CDNA CD 1 atggaagcat tggttTatac attttTgttg gtaggtactt taggaataat CD 51 tttttttgct atttTtTtcc gagaaccacc taaagttccg agcaaaggaa CD 101 aaaaataa SQ SEQUENCE 36 AA; MEALVYTFLL VGTLGIIFFA IFFREPPKVP SKGKK* // ID AB254134_5 STANDARD; PRT; 75 AA. AC AB254134; DT Tue Jul 21 07:00:11 2009 DE Takakia lepidozioides chloroplast clpP, psbB, psbT, psbN, psbH, OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbH FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE94557.1 FT PROTEIN_NAME : photosystem II 10 kDa phosphoprotein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 4311 - 4535 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 50 S(tCt) -> F(tTt) FT EDITING : 58 P(cCg) -> L(cTg) FT EDITING : 60 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 aCggctacac agattattga tgatgctcct aaaaccaggg gaaaacgaag CD 51 tggtatagga gatattttga aaccacttaa ttcggaatat ggtaaagtgg CD 101 cccctggatg gggaacaact cctctgatgg gtattgtagt agcactatCt CD 151 gcagtttttc tagttattat tcCggaacCt tataattctt ctgttttact CD 201 agacggagtt cctgtaagtt ggtaa FT EDITED CDNA CD 1 aTggctacac agattattga tgatgctcct aaaaccaggg gaaaacgaag CD 51 tggtatagga gatattttga aaccacttaa ttcggaatat ggtaaagtgg CD 101 cccctggatg gggaacaact cctctgatgg gtattgtagt agcactatTt CD 151 gcagtttttc tagttattat tcTggaacTt tataattctt ctgttttact CD 201 agacggagtt cctgtaagtt ggtaa SQ SEQUENCE 75 AA; MATQIIDDAP KTRGKRSGIG DILKPLNSEY GKVAPGWGTT PLMGIVVALF AVFLVIILEL YNSSVLLDGV PVSW* // ID AB254134_6 STANDARD; PRT; 216 AA. AC AB254134; DT Tue Jul 21 07:00:11 2009 DE Takakia lepidozioides chloroplast clpP, psbB, psbT, psbN, psbH, OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : petB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE94558.1 FT PROTEIN_NAME : cytochrome b6 complex subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 3/0 FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 8 S(tCC) -> F(tTT) FT EDITING : 33 S(tCt) -> F(tTt) FT EDITING : 34 H(Cat) -> Y(Tat) FT EDITING : 36 S(tCg) -> L(tTg) FT EDITING : 41 S(tCg) -> L(tTg) FT EDITING : 45 S(tCg) -> L(tTg) FT EDITING : 52 S(tCt) -> F(tTt) FT EDITING : 54 T(aCg) -> M(aTg) FT EDITING : 56 L(Ctc) -> F(Ttc) FT EDITING : 58 H(Cat) -> Y(Tat) FT EDITING : 68 P(Cct) -> S(Tct) FT EDITING : 95 S(tCa) -> L(tTa) FT EDITING : 97 T(aCg) -> M(aTg) FT EDITING : 99 P(cCg) -> L(cTg) FT EDITING : 102 S(tCt) -> F(tTt) FT EDITING : 106 P(cCt) -> L(cTt) FT EDITING : 122 A(gCa) -> V(gTa) FT EDITING : 124 P(cCa) -> L(cTa) FT EDITING : 131 P(CCt) -> F(TTt) FT EDITING : 140 R(Cgg) -> W(Tgg) FT EDITING : 145 H(Cac) -> Y(Tac) FT EDITING : 161 T(aCa) -> I(aTa) FT EDITING : 165 S(tCg) -> L(tTg) FT EDITING : 180 S(tCg) -> L(tTg) FT EDITING : 191 S(tCa) -> L(tTa) FT EDITING : 193 P(cCt) -> L(cTt) FT EDITING : 194 P(cCt) -> L(cTt) FT EDITING : 198 S(tCt) -> F(tTt) FT EDITING : 199 T(aCg) -> M(aTg) FT EDITING : 200 S(tCa) -> L(tTa) FT EDITING : 204 P(cCa) -> L(cTa) FT EDITING : 215 S(tCa) -> L(tTa) FT EDITING : 216 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 648 NT; CD 1 aCgggtaaag tatacgattg gtCCgaggag cgtctcgaaa tccaggcgat CD 51 tgcagatgat attactagta aatatgtccc gcctcatgtc aatatatCtC CD 101 attgttCggg gggaattact tCgacttgtt tctCggtaca ggtagccacc CD 151 ggttCtgcta CgactCtcta cCatcgtccg accgtaacag aagcttttgc CD 201 cCctgtccaa tatataatga ctgaagtcaa ttttggttgg ctaattcgat CD 251 cagttcatcg atggtcggcg agtatgatgg tttCaatgaC gattcCgcac CD 301 gtatCtcgcg tttatcCtac aggaggtttt aagaaacctc gtgaattaac CD 351 ttgggttact ggtgCaattc Cagctgtatt aacagtttct CCtggtgtaa CD 401 ctggttattc tttgcctCgg gatcaaattg gtCactgggc tgtcaagatc CD 451 gtaactggtg tacccgaagc tattcccgtt aCaggatctc cctCggtaga CD 501 gttattacgc ggaagtgtta gtgtaggtca atctacatCg actcgttttt CD 551 acagtttaca cacttttgta tCacctcCtc Ctactgctgt ttCtaCgtCa CD 601 atgcattttc Caatgattcg taaacaaggt atctcaggtc cttCaCaa FT EDITED CDNA CD 1 aTgggtaaag tatacgattg gtTTgaggag cgtctcgaaa tccaggcgat CD 51 tgcagatgat attactagta aatatgtccc gcctcatgtc aatatatTtT CD 101 attgttTggg gggaattact tTgacttgtt tctTggtaca ggtagccacc CD 151 ggttTtgcta TgactTtcta cTatcgtccg accgtaacag aagcttttgc CD 201 cTctgtccaa tatataatga ctgaagtcaa ttttggttgg ctaattcgat CD 251 cagttcatcg atggtcggcg agtatgatgg tttTaatgaT gattcTgcac CD 301 gtatTtcgcg tttatcTtac aggaggtttt aagaaacctc gtgaattaac CD 351 ttgggttact ggtgTaattc Tagctgtatt aacagtttct TTtggtgtaa CD 401 ctggttattc tttgcctTgg gatcaaattg gtTactgggc tgtcaagatc CD 451 gtaactggtg tacccgaagc tattcccgtt aTaggatctc cctTggtaga CD 501 gttattacgc ggaagtgtta gtgtaggtca atctacatTg actcgttttt CD 551 acagtttaca cacttttgta tTacctcTtc Ttactgctgt ttTtaTgtTa CD 601 atgcattttc Taatgattcg taaacaaggt atctcaggtc cttTaTaa SQ SEQUENCE 216 AA; MGKVYDWFEE RLEIQAIADD ITSKYVPPHV NIFYCLGGIT LTCFLVQVAT GFAMTFYYRP TVTEAFASVQ YIMTEVNFGW LIRSVHRWSA SMMVLMMILH VFRVYLTGGF KKPRELTWVT GVILAVLTVS FGVTGYSLPW DQIGYWAVKI VTGVPEAIPV IGSPLVELLR GSVSVGQSTL TRFYSLHTFV LPLLTAVFML MHFLMIRKQG ISGPL* // ID AB254134_7 STANDARD; PRT; 161 AA. AC AB254134; DT Tue Jul 21 07:00:11 2009 DE Takakia lepidozioides chloroplast clpP, psbB, psbT, psbN, psbH, OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : petD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE94559.1 FT PROTEIN_NAME : cytochrome b/f complex subunit IV FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 3/2 FT EDITING : 9 S(tCa) -> L(tTa) FT EDITING : 14 S(tCg) -> L(tTg) FT EDITING : 37 S(tCg) -> L(tTg) FT EDITING : 40 S(tCt) -> F(tTt) FT EDITING : 45 P(cCa) -> L(cTa) FT EDITING : 73 P(cCg) -> L(cTg) FT EDITING : 82 S(tCt) -> F(tTt) FT EDITING : 85 S(tCt) -> F(tTt) FT EDITING : 99 P(cCt) -> L(cTt) FT EDITING : 114 P(cCg) -> L(cTg) FT EDITING : 134 P(cCa) -> L(cTa) FT EDITING : 141 P(cCt) -> L(cTt) FT EDITING : 142 R(Cgg) -> W(Tgg) FT EDITING : 157 L(Cta) -> L(Tta) FT EDITING : 161 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 483 NT; CD 1 atgggagtaa caaaaaaacc tgattCaagt gatcctgtat Cgagggctaa CD 51 attagctaaa ggtatgggac ataattatta tggggaaccc gcttggccta CD 101 acgatctttC gtatatttCt ccagtagtga ttcCaggtac tattgcatgt CD 151 actgtaggtc tagcagttct agaaccgtcc atgattggtg aaccggcaaa CD 201 tccatttgca actcctcCgg aaatattacc cgaatggtat ttctCtcctg CD 251 tgtCtcaaat acttcgtaca gtccctaata aattactagg tgttcCttta CD 301 atggctgcag tacctgcggg attattgaca ataccttttc Cggaaaatgt CD 351 gaataaattt cagaatcctt ttcgtcgtcc agtagctaca acagtttttc CD 401 Caatcggtac cgcagtagct cCtCggttgg gtattggggc tgctttacct CD 451 atcgataaat ctttaactCt agggcttttt Cga FT EDITED CDNA CD 1 atgggagtaa caaaaaaacc tgattTaagt gatcctgtat Tgagggctaa CD 51 attagctaaa ggtatgggac ataattatta tggggaaccc gcttggccta CD 101 acgatctttT gtatatttTt ccagtagtga ttcTaggtac tattgcatgt CD 151 actgtaggtc tagcagttct agaaccgtcc atgattggtg aaccggcaaa CD 201 tccatttgca actcctcTgg aaatattacc cgaatggtat ttctTtcctg CD 251 tgtTtcaaat acttcgtaca gtccctaata aattactagg tgttcTttta CD 301 atggctgcag tacctgcggg attattgaca ataccttttc Tggaaaatgt CD 351 gaataaattt cagaatcctt ttcgtcgtcc agtagctaca acagtttttc CD 401 Taatcggtac cgcagtagct cTtTggttgg gtattggggc tgctttacct CD 451 atcgataaat ctttaactTt agggcttttt Tga SQ SEQUENCE 161 AA; MGVTKKPDLS DPVLRAKLAK GMGHNYYGEP AWPNDLLYIF PVVILGTIAC TVGLAVLEPS MIGEPANPFA TPLEILPEWY FFPVFQILRT VPNKLLGVLL MAAVPAGLLT IPFLENVNKF QNPFRRPVAT TVFLIGTAVA LWLGIGAALP IDKSLTLGLF * // ID AB299142_1 STANDARD; PRT; 203 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : rps4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50112.1 FT PROTEIN_NAME : ribosomal protein S4 protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 64 - 672 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 18 S(tCa) -> L(tTa) FT EDITING : 59 H(Cat) -> Y(Tat) FT EDITING : 84 S(tCg) -> L(tTg) FT EDITING : 133 P(ccC) -> P(ccT) FT CODON_START : 1 CL CDNALEN 609 NT; CD 1 aCgtcccgtt accgaggacc tcgtgtgagg gtaatacgtc gtctgggggc CD 51 ttCaccagga ctaactaata aaacacccca gtcaaaatct ggttatatca CD 101 accaatctac atctaataaa aaaatttctc agtatcgtat tcgtttggag CD 151 gaaaaacaaa aattgcgttt tcatCatgga gtaacagagc gacaattact CD 201 caaatatgtt cgtattgcta gaagagctaa aggatcaacg ggtcaagttt CD 251 Cgttacaatt gctggaaatg cgtttagata atgtcatttt tcgattgggt CD 301 atggctccta ctattcctgg agcaagacaa ttggtgaatc atcgacacat CD 351 attggtaaat gatcgtacag taaacatacc aagttttcgt tgtaaaccCc CD 401 aagattttat tactacgaag gatcgacaaa aatctcaagc tgtaataaca CD 451 aaaaatatgg attgctctca gaaatcagaa atgccgaacc atttaactct CD 501 taattcttca caaaaaaggg gattggttaa tcaaataata gatcgtgaat CD 551 caattggttt aaaaataaat gaattgttag ttgtggaata ctattctcgt CD 601 caagcttga FT EDITED CDNA CD 1 aTgtcccgtt accgaggacc tcgtgtgagg gtaatacgtc gtctgggggc CD 51 ttTaccagga ctaactaata aaacacccca gtcaaaatct ggttatatca CD 101 accaatctac atctaataaa aaaatttctc agtatcgtat tcgtttggag CD 151 gaaaaacaaa aattgcgttt tcatTatgga gtaacagagc gacaattact CD 201 caaatatgtt cgtattgcta gaagagctaa aggatcaacg ggtcaagttt CD 251 Tgttacaatt gctggaaatg cgtttagata atgtcatttt tcgattgggt CD 301 atggctccta ctattcctgg agcaagacaa ttggtgaatc atcgacacat CD 351 attggtaaat gatcgtacag taaacatacc aagttttcgt tgtaaaccTc CD 401 aagattttat tactacgaag gatcgacaaa aatctcaagc tgtaataaca CD 451 aaaaatatgg attgctctca gaaatcagaa atgccgaacc atttaactct CD 501 taattcttca caaaaaaggg gattggttaa tcaaataata gatcgtgaat CD 551 caattggttt aaaaataaat gaattgttag ttgtggaata ctattctcgt CD 601 caagcttga SQ SEQUENCE 203 AA; MSRYRGPRVR VIRRLGALPG LTNKTPQSKS GYINQSTSNK KISQYRIRLE EKQKLRFHYG VTERQLLKYV RIARRAKGST GQVLLQLLEM RLDNVIFRLG MAPTIPGARQ LVNHRHILVN DRTVNIPSFR CKPQDFITTK DRQKSQAVIT KNMDCSQKSE MPNHLTLNSS QKRGLVNQII DRESIGLKIN ELLVVEYYSR QA* // ID AB299142_2 STANDARD; PRT; 170 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : ndhJ FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50113.1 FT PROTEIN_NAME : NADH dehydrogenase 30 kD subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2787 - 3296 FT DIRECTIONS : negative FT EDITING : 49 S(tcC) -> S(tcT) FT EDITING : 58 G(ggC) -> G(ggT) FT EDITING : 59 S(tCt) -> F(tTt) FT EDITING : 62 L(ctC) -> L(ctT) FT EDITING : 64 S(tcC) -> S(tcT) FT CODON_START : 1 CL CDNALEN 510 NT; CD 1 atgttagata cttctacgaa taatactact gaaatgcagg gtcgattatc CD 51 tgcttggcta gcgaaacata gattagctca tagacctttg ggtttcgatt CD 101 accaaggtgt agaaacttta caaattagat ctgaggattg gctttcCgta CD 151 gcggtagctt tatatgttta tggCtCtaac tatctCcgtt cCcaatgtgc CD 201 ttatgacgta gcgccagggg gactactagc tagtgtatat cactttacga CD 251 aagtacaaga caatgcagat caacccgaag aggtatgtat aaaagttttt CD 301 gtatcgaggc aaaatcctga aattccatct gttttctgga tctggaaaag CD 351 tgctgatttt caggaacggg aatcttatga tatgttggga atttctcacg CD 401 aaagtcatcc gcatcttaaa cgtatattga tgcccgctag ttggatcggt CD 451 tggcctttac gcaaagatta cattgtacct aatttctatg agctacaaga CD 501 tgcatattga FT EDITED CDNA CD 1 atgttagata cttctacgaa taatactact gaaatgcagg gtcgattatc CD 51 tgcttggcta gcgaaacata gattagctca tagacctttg ggtttcgatt CD 101 accaaggtgt agaaacttta caaattagat ctgaggattg gctttcTgta CD 151 gcggtagctt tatatgttta tggTtTtaac tatctTcgtt cTcaatgtgc CD 201 ttatgacgta gcgccagggg gactactagc tagtgtatat cactttacga CD 251 aagtacaaga caatgcagat caacccgaag aggtatgtat aaaagttttt CD 301 gtatcgaggc aaaatcctga aattccatct gttttctgga tctggaaaag CD 351 tgctgatttt caggaacggg aatcttatga tatgttggga atttctcacg CD 401 aaagtcatcc gcatcttaaa cgtatattga tgcccgctag ttggatcggt CD 451 tggcctttac gcaaagatta cattgtacct aatttctatg agctacaaga CD 501 tgcatattga SQ SEQUENCE 170 AA; MLDTSTNNTT EMQGRLSAWL AKHRLAHRPL GFDYQGVETL QIRSEDWLSV AVALYVYGFN YLRSQCAYDV APGGLLASVY HFTKVQDNAD QPEEVCIKVF VSRQNPEIPS VFWIWKSADF QERESYDMLG ISHESHPHLK RILMPASWIG WPLRKDYIVP NFYELQDAY* // ID AB299142_3 STANDARD; PRT; 260 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : ndhK FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50114.1 FT PROTEIN_NAME : NADH dehydrogenase 27 kD subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3333 - 4112 FT DIRECTIONS : negative FT EDITING : 34 T(aCt) -> I(aTt) FT EDITING : 60 H(Cac) -> Y(Tac) FT EDITING : 64 R(Cgt) -> C(Tgt) FT EDITING : 95 P(cCc) -> L(cTc) FT EDITING : 97 T(aCa) -> I(aTa) FT EDITING : 104 T(aCg) -> M(aTg) FT EDITING : 126 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 780 NT; CD 1 atggtcttag tttccaaata tttaaattgt gaaaataaaa tcgagaattc CD 51 tatgaagcca cttataaatt ctatagagtc atctttactt gatcaaacaa CD 101 Ctccaaattc aattattcta actaccttca atgatttctc aaattgggct CD 151 aggctttcca gtctatggcc acttctcCac ggtactagtC gttgtttcat CD 201 cgaatttgct tcattaatcg gttcgcgatt cgacttcgat cgctacggtt CD 251 tggtaccaag atctagtcct agacaagctg accCcgtaaC aacggctggc CD 301 actgtaacca Cgaaaatggc tccgtctctg gtaagactat acgaacaaat CD 351 gcctgagcct aaatatgtta ttgctaCggg agcatgtacc atcacgggag CD 401 gtatgtttag tacagattct tatagtactg ttcgtggagt agataaattg CD 451 attcctgtag atatttattt acctggttgt ccaccgaaac cagaagctat CD 501 tatagatgct ataataaaac ttcgtaaaaa agtggctcag gagacatatg CD 551 gggatagaac taagcttcga caaggaaata ggtatttgac gttgaatcat CD 601 caatttcagt ttatacctac tcttagtacc gagcgatgtg gtgaacattt CD 651 acaccataag tttccaaaat ctcaacttaa ttcaacttcg gagataactt CD 701 ctaaaacaat tcagaaatat agtgattcag tatcctctcc ggaatatgga CD 751 aatgatgagg aggaattttc ggagaaatga FT EDITED CDNA CD 1 atggtcttag tttccaaata tttaaattgt gaaaataaaa tcgagaattc CD 51 tatgaagcca cttataaatt ctatagagtc atctttactt gatcaaacaa CD 101 Ttccaaattc aattattcta actaccttca atgatttctc aaattgggct CD 151 aggctttcca gtctatggcc acttctcTac ggtactagtT gttgtttcat CD 201 cgaatttgct tcattaatcg gttcgcgatt cgacttcgat cgctacggtt CD 251 tggtaccaag atctagtcct agacaagctg accTcgtaaT aacggctggc CD 301 actgtaacca Tgaaaatggc tccgtctctg gtaagactat acgaacaaat CD 351 gcctgagcct aaatatgtta ttgctaTggg agcatgtacc atcacgggag CD 401 gtatgtttag tacagattct tatagtactg ttcgtggagt agataaattg CD 451 attcctgtag atatttattt acctggttgt ccaccgaaac cagaagctat CD 501 tatagatgct ataataaaac ttcgtaaaaa agtggctcag gagacatatg CD 551 gggatagaac taagcttcga caaggaaata ggtatttgac gttgaatcat CD 601 caatttcagt ttatacctac tcttagtacc gagcgatgtg gtgaacattt CD 651 acaccataag tttccaaaat ctcaacttaa ttcaacttcg gagataactt CD 701 ctaaaacaat tcagaaatat agtgattcag tatcctctcc ggaatatgga CD 751 aatgatgagg aggaattttc ggagaaatga SQ SEQUENCE 260 AA; MVLVSKYLNC ENKIENSMKP LINSIESSLL DQTIPNSIIL TTFNDFSNWA RLSSLWPLLY GTSCCFIEFA SLIGSRFDFD RYGLVPRSSP RQADLVITAG TVTMKMAPSL VRLYEQMPEP KYVIAMGACT ITGGMFSTDS YSTVRGVDKL IPVDIYLPGC PPKPEAIIDA IIKLRKKVAQ ETYGDRTKLR QGNRYLTLNH QFQFIPTLST ERCGEHLHHK FPKSQLNSTS EITSKTIQKY SDSVSSPEYG NDEEEFSEK* // ID AB299142_4 STANDARD; PRT; 121 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : ndhC FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50115.1 FT PROTEIN_NAME : NADH dehydrogenase ND3 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 4103 - 4465 FT DIRECTIONS : negative FT EDITING : 2 F(ttC) -> F(ttT) FT EDITING : 67 S(tCa) -> L(tTa) FT EDITING : 71 T(aCt) -> I(aTt) FT EDITING : 72 F(ttC) -> F(ttT) FT EDITING : 78 S(tCt) -> F(tTt) FT EDITING : 98 S(tCg) -> L(tTg) FT EDITING : 104 S(tCa) -> L(tTa) FT EDITING : 108 S(tCg) -> L(tTg) FT EDITING : 117 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 363 NT; CD 1 atgttCttac ttcccaaaaa cgattctctt tggatttttt tgctaataac CD 51 tagtcttatt cctataacag ctttttctat ttccaaaatt atagcacctg CD 101 ttagtgaggg accagaaaaa tttactagtt atgaatcagg tatagaacca CD 151 atgggagatg cttggatcca attccatatt cgttattaca tgtttgcctC CD 201 agttcttgtt aCtttCgatg tagaaacagt ttCtctctat ccatgggcta CD 251 tgagttttaa tgaattgggt atatctgctt ttatcgaagc gtCgattttc CD 301 gtgtctattt Caatcattgg ttCggtttat gcgtggcgga aaggagcatC CD 351 ggaatggtct tag FT EDITED CDNA CD 1 atgttTttac ttcccaaaaa cgattctctt tggatttttt tgctaataac CD 51 tagtcttatt cctataacag ctttttctat ttccaaaatt atagcacctg CD 101 ttagtgaggg accagaaaaa tttactagtt atgaatcagg tatagaacca CD 151 atgggagatg cttggatcca attccatatt cgttattaca tgtttgcctT CD 201 agttcttgtt aTtttTgatg tagaaacagt ttTtctctat ccatgggcta CD 251 tgagttttaa tgaattgggt atatctgctt ttatcgaagc gtTgattttc CD 301 gtgtctattt Taatcattgg ttTggtttat gcgtggcgga aaggagcatT CD 351 ggaatggtct tag SQ SEQUENCE 121 AA; MFLLPKNDSL WIFLLITSLI PITAFSISKI IAPVSEGPEK FTSYESGIEP MGDAWIQFHI RYYMFALVLV IFDVETVFLY PWAMSFNELG ISAFIEALIF VSILIIGLVY AWRKGALEWS * // ID AB299142_5 STANDARD; PRT; 139 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : atpE FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50116.1 FT PROTEIN_NAME : ATP synthase epsilon subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 8918 - 9334 FT DIRECTIONS : negative FT EDITING : 24 P(cCa) -> L(cTa) FT EDITING : 40 P(cCt) -> L(cTt) FT EDITING : 44 P(cCg) -> L(cTg) FT EDITING : 119 S(tCt) -> F(tTt) FT EDITING : 134 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 417 NT; CD 1 atgaccctaa atcttcgtgt aatggctcct aatcgaattg tttggaattc CD 51 agaagttcaa gagattattc Catctaccaa tagtggtcaa attggcgtat CD 101 tacctaacca tgccccacCt ctcacagcgc Cggatatagg aattataaag CD 151 atacgactta atggacaatg gttcactatg gcgttgatgg gcggttttgc CD 201 tatgatagac aataacagaa tgaccatatt ggtgaatgaa gcggaaaaag CD 251 ctattgagat agatcctcga gaggcccaag atacttttca aatggctcgg CD 301 gacaagctag ctcaagctgg aggtagaaaa caagttattg aagctaattt CD 351 agcctCtaaa agagccaaag cacggttaga agctatcaac gctacttctt CD 401 Cttccgtctc taattaa FT EDITED CDNA CD 1 atgaccctaa atcttcgtgt aatggctcct aatcgaattg tttggaattc CD 51 agaagttcaa gagattattc Tatctaccaa tagtggtcaa attggcgtat CD 101 tacctaacca tgccccacTt ctcacagcgc Tggatatagg aattataaag CD 151 atacgactta atggacaatg gttcactatg gcgttgatgg gcggttttgc CD 201 tatgatagac aataacagaa tgaccatatt ggtgaatgaa gcggaaaaag CD 251 ctattgagat agatcctcga gaggcccaag atacttttca aatggctcgg CD 301 gacaagctag ctcaagctgg aggtagaaaa caagttattg aagctaattt CD 351 agcctTtaaa agagccaaag cacggttaga agctatcaac gctacttctt CD 401 Tttccgtctc taattaa SQ SEQUENCE 139 AA; MTLNLRVMAP NRIVWNSEVQ EIILSTNSGQ IGVLPNHAPL LTALDIGIIK IRLNGQWFTM ALMGGFAMID NNRMTILVNE AEKAIEIDPR EAQDTFQMAR DKLAQAGGRK QVIEANLAFK RAKARLEAIN ATSFSVSN* // ID AB299142_6 STANDARD; PRT; 493 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : atpB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50117.1 FT PROTEIN_NAME : ATP synthase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 9342 - 10820 FT DIRECTIONS : negative FT EDITING : 13 P(cCc) -> L(cTc) FT EDITING : 33 S(tCc) -> F(tTc) FT EDITING : 44 P(Cct) -> S(Tct) FT EDITING : 75 A(gCg) -> V(gTg) FT EDITING : 77 T(aCg) -> M(aTg) FT EDITING : 96 S(tCa) -> L(tTa) FT EDITING : 105 P(cCt) -> L(cTt) FT EDITING : 119 S(tCa) -> L(tTa) FT EDITING : 137 S(tCt) -> F(tTt) FT EDITING : 157 S(tCa) -> L(tTa) FT EDITING : 168 S(tCa) -> L(tTa) FT EDITING : 181 T(aCg) -> M(aTg) FT EDITING : 197 S(tCc) -> F(tTc) FT EDITING : 210 P(cCt) -> L(cTt) FT EDITING : 214 T(aCg) -> M(aTg) FT EDITING : 249 S(tCa) -> L(tTa) FT EDITING : 252 P(cCa) -> L(cTa) FT EDITING : 258 S(tCt) -> F(tTt) FT EDITING : 268 S(tCa) -> L(tTa) FT EDITING : 274 S(tCt) -> F(tTt) FT EDITING : 276 S(tCt) -> F(tTt) FT EDITING : 286 P(cCa) -> L(cTa) FT EDITING : 296 H(Cat) -> Y(Tat) FT EDITING : 300 P(cCg) -> L(cTg) FT EDITING : 307 S(tCg) -> L(tTg) FT EDITING : 321 P(Cca) -> S(Tca) FT EDITING : 326 H(Cat) -> Y(Tat) FT EDITING : 350 P(cCa) -> L(cTa) FT EDITING : 366 S(tCa) -> L(tTa) FT EDITING : 370 P(Cct) -> S(Tct) FT EDITING : 373 P(cCt) -> L(cTt) FT EDITING : 411 S(tCa) -> L(tTa) FT EDITING : 439 S(tCt) -> F(tTt) FT EDITING : 449 P(cCc) -> L(cTc) FT EDITING : 460 P(cCt) -> L(cTt) FT EDITING : 472 S(tCt) -> F(tTt) FT EDITING : 473 H(Cat) -> Y(Tat) FT EDITING : 474 P(cCg) -> L(cTg) FT EDITING : 488 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1479 NT; CD 1 atgaaaacaa atcctcgtgc ttttgggatt tctacacCcg ttgccgagaa CD 51 tgtaggacgt attactcaga ttattggtcc cgtattagat gtaacttCct CD 101 ccccgggtaa gatgcctaat atttacaacC ctctgatagt aaagggccaa CD 151 aatacagctg gtcagggaat taatgttacg tgtgaggtac aacagttatt CD 201 aggaaataat aaggttagag ctgCggctaC gagtgctaca gatggtttga CD 251 tgagaggaat gaaagttatt gatacaggag ctccttCaag tgttccggtt CD 301 ggtgaagcga cccCtggacg aatctttaac gttctcggag aacctgttga CD 351 taattCaggt cctgtagatg ttagtacaac atttcctatt catagatctg CD 401 ctcctgcctC tacacagtta gatacgaaat tatccatttt tgaaacagga CD 451 attaaagtag tagatctttC agctccttat cgccgtggag gaaaaattgg CD 501 atCatttgga ggagctgggg taggaaaaac agtacttatc aCggagctaa CD 551 ttaataatat tgctaaagct catggcggtg tatccgtatC cggtggagtg CD 601 ggagaacgta cccgtgaggg aaatgatcCt tacatggaga Cgaaggaatc CD 651 gaaggtaatt aatgaacaaa acatttcgga atccaaagtt gcactagttt CD 701 atggtcagat gaatgaacca ccaggggctc gtatgagagt cggttCaact CD 751 gctcCaacca tggctgaata ttCtcgagac gttaataagc aagatgtact CD 801 ttCattcatc gacaatattt CtcgttCtgt ccaagcagga tcagaagttt CD 851 ctgctcCatt aggtagaatg ccgtctgctg taggtCatca accaactcCg CD 901 agcacagaga tgggtacttC gcaagaaaga attacttcca caaaagaggg CD 951 atccataacc Ccaattcaag cagttCatgt acctgcagat gatttgactg CD 1001 atccagctcc cgctacgacc ttcgcacacc tagatgcaac tactgtacCa CD 1051 tcgagaggat tagctgccaa aggtatctat ccagccgtag atccctCaga CD 1101 ttcaactCct actatgcCtc aaccctggat cgtgggcgag gaacattacg CD 1151 aaacggcaca aggcgttaag caaacgttgc aacgttataa agaactgcaa CD 1201 gacattatag ctattcttgg actggacgaa tCatcagaag aggaccgttt CD 1251 gaccgtagcg agagcacgga aaattgaacg tttcttatcc caaccttttt CD 1301 tcgtcgcgga ggtatCtaca ggttccccag gtaaatatgt tagtcCcgta CD 1351 gaaacaatta aaggttttca aatgatccCt tccggagaat tggatagtct CD 1401 tcccgaacag gcttCtCatc Cggtaggtaa cattgatgaa gctactgcga CD 1451 aggctgcaac ctCacaggtg gagaattga FT EDITED CDNA CD 1 atgaaaacaa atcctcgtgc ttttgggatt tctacacTcg ttgccgagaa CD 51 tgtaggacgt attactcaga ttattggtcc cgtattagat gtaacttTct CD 101 ccccgggtaa gatgcctaat atttacaacT ctctgatagt aaagggccaa CD 151 aatacagctg gtcagggaat taatgttacg tgtgaggtac aacagttatt CD 201 aggaaataat aaggttagag ctgTggctaT gagtgctaca gatggtttga CD 251 tgagaggaat gaaagttatt gatacaggag ctccttTaag tgttccggtt CD 301 ggtgaagcga cccTtggacg aatctttaac gttctcggag aacctgttga CD 351 taattTaggt cctgtagatg ttagtacaac atttcctatt catagatctg CD 401 ctcctgcctT tacacagtta gatacgaaat tatccatttt tgaaacagga CD 451 attaaagtag tagatctttT agctccttat cgccgtggag gaaaaattgg CD 501 atTatttgga ggagctgggg taggaaaaac agtacttatc aTggagctaa CD 551 ttaataatat tgctaaagct catggcggtg tatccgtatT cggtggagtg CD 601 ggagaacgta cccgtgaggg aaatgatcTt tacatggaga Tgaaggaatc CD 651 gaaggtaatt aatgaacaaa acatttcgga atccaaagtt gcactagttt CD 701 atggtcagat gaatgaacca ccaggggctc gtatgagagt cggttTaact CD 751 gctcTaacca tggctgaata ttTtcgagac gttaataagc aagatgtact CD 801 ttTattcatc gacaatattt TtcgttTtgt ccaagcagga tcagaagttt CD 851 ctgctcTatt aggtagaatg ccgtctgctg taggtTatca accaactcTg CD 901 agcacagaga tgggtacttT gcaagaaaga attacttcca caaaagaggg CD 951 atccataacc Tcaattcaag cagttTatgt acctgcagat gatttgactg CD 1001 atccagctcc cgctacgacc ttcgcacacc tagatgcaac tactgtacTa CD 1051 tcgagaggat tagctgccaa aggtatctat ccagccgtag atccctTaga CD 1101 ttcaactTct actatgcTtc aaccctggat cgtgggcgag gaacattacg CD 1151 aaacggcaca aggcgttaag caaacgttgc aacgttataa agaactgcaa CD 1201 gacattatag ctattcttgg actggacgaa tTatcagaag aggaccgttt CD 1251 gaccgtagcg agagcacgga aaattgaacg tttcttatcc caaccttttt CD 1301 tcgtcgcgga ggtatTtaca ggttccccag gtaaatatgt tagtcTcgta CD 1351 gaaacaatta aaggttttca aatgatccTt tccggagaat tggatagtct CD 1401 tcccgaacag gcttTtTatc Tggtaggtaa cattgatgaa gctactgcga CD 1451 aggctgcaac ctTacaggtg gagaattga SQ SEQUENCE 493 AA; MKTNPRAFGI STLVAENVGR ITQIIGPVLD VTFSPGKMPN IYNSLIVKGQ NTAGQGINVT CEVQQLLGNN KVRAVAMSAT DGLMRGMKVI DTGAPLSVPV GEATLGRIFN VLGEPVDNLG PVDVSTTFPI HRSAPAFTQL DTKLSIFETG IKVVDLLAPY RRGGKIGLFG GAGVGKTVLI MELINNIAKA HGGVSVFGGV GERTREGNDL YMEMKESKVI NEQNISESKV ALVYGQMNEP PGARMRVGLT ALTMAEYFRD VNKQDVLLFI DNIFRFVQAG SEVSALLGRM PSAVGYQPTL STEMGTLQER ITSTKEGSIT SIQAVYVPAD DLTDPAPATT FAHLDATTVL SRGLAAKGIY PAVDPLDSTS TMLQPWIVGE EHYETAQGVK QTLQRYKELQ DIIAILGLDE LSEEDRLTVA RARKIERFLS QPFFVAEVFT GSPGKYVSLV ETIKGFQMIL SGELDSLPEQ AFYLVGNIDE ATAKAATLQV EN* // ID AB299142_8 STANDARD; PRT; 317 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : accD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50119.1 FT PROTEIN_NAME : acetyl-CoA carboxylase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 13428 - 14378 FT DIRECTIONS : positive FT EDITING : 6 R(Cgg) -> W(Tgg) FT EDITING : 31 S(agC) -> S(agT) FT EDITING : 51 R(Cgt) -> C(Tgt) FT EDITING : 88 S(tCa) -> L(tTa) FT EDITING : 94 R(Cgg) -> W(Tgg) FT EDITING : 149 T(aCg) -> M(aTg) FT EDITING : 151 S(tCt) -> F(tTt) FT EDITING : 153 S(tCt) -> F(tTt) FT EDITING : 169 P(cCt) -> L(cTt) FT EDITING : 170 I(atC) -> I(atT) FT EDITING : 198 P(cCa) -> L(cTa) FT EDITING : 206 P(Ccc) -> S(Tcc) FT EDITING : 208 S(tCa) -> L(tTa) FT EDITING : 223 P(cCC) -> L(cTT) FT EDITING : 237 T(aCg) -> M(aTg) FT EDITING : 252 S(tCt) -> F(tTt) FT EDITING : 284 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 951 NT; CD 1 atgtctctaa tgaatCggtt cgaagacaaa cgccgattcg gtggattaat CD 51 cggagctttt attgaaaagg ctactaaagg atatgttctc agCgaaaggg CD 101 aaaaagatcg atatataaaa attgatacta ctaaagggtt atggactcga CD 151 Cgtgacaatt gtgagaacat gctctatgtt agattcctga gacaaaatag CD 201 gcgcatttgt gaagaatgtg ggtatcattt gcaaatgagt agtacagaaa CD 251 gaattgaact ttCaattgat cgtgggactC ggcatcctat ggatgaagac CD 301 atggttgctc gagatgttct tagattttct gatgaagatt cttataagaa CD 351 tcgtgttact ttttatcaga aacgaacggg tttgactgat gctattcaaa CD 401 caggcatagg gaaactagat gggactcctg ttgctcttgg agttaCggat CD 451 tCtcagtCta tgggaggtag tatgggttct gtggtaggtg aaaagattac CD 501 tcgtcCtatC gaatatgcta ccagaaaatc tatgccgtta ataatagtgt CD 551 gttcctccgg aggagcacgc atgcaagaag gaactttaag tcCaatgcaa CD 601 atggctaaga tttctCccgt ttCacaaatc catcaagctc aaaaaaggtt CD 651 attatatata cctattcCCa catatcctac aactggtgga gttactgcta CD 701 gttttggtaC gttaggagac attattattg ctgaacccaa agcatacatt CD 751 gcatCtgcgg gtaaaagagt aatcgaacaa acattacgtc aaaaaatacc CD 801 tgatggtttt caagttgctg aatctttatt tgatcatggt ttactcgatt CD 851 Cgattgttcc acgtaacctc tcgaaaggcg ttttgagtga aatatttgaa CD 901 ctttatggtt cagctccttg taaggaacgt aataattatt attttagata CD 951 a FT EDITED CDNA CD 1 atgtctctaa tgaatTggtt cgaagacaaa cgccgattcg gtggattaat CD 51 cggagctttt attgaaaagg ctactaaagg atatgttctc agTgaaaggg CD 101 aaaaagatcg atatataaaa attgatacta ctaaagggtt atggactcga CD 151 Tgtgacaatt gtgagaacat gctctatgtt agattcctga gacaaaatag CD 201 gcgcatttgt gaagaatgtg ggtatcattt gcaaatgagt agtacagaaa CD 251 gaattgaact ttTaattgat cgtgggactT ggcatcctat ggatgaagac CD 301 atggttgctc gagatgttct tagattttct gatgaagatt cttataagaa CD 351 tcgtgttact ttttatcaga aacgaacggg tttgactgat gctattcaaa CD 401 caggcatagg gaaactagat gggactcctg ttgctcttgg agttaTggat CD 451 tTtcagtTta tgggaggtag tatgggttct gtggtaggtg aaaagattac CD 501 tcgtcTtatT gaatatgcta ccagaaaatc tatgccgtta ataatagtgt CD 551 gttcctccgg aggagcacgc atgcaagaag gaactttaag tcTaatgcaa CD 601 atggctaaga tttctTccgt ttTacaaatc catcaagctc aaaaaaggtt CD 651 attatatata cctattcTTa catatcctac aactggtgga gttactgcta CD 701 gttttggtaT gttaggagac attattattg ctgaacccaa agcatacatt CD 751 gcatTtgcgg gtaaaagagt aatcgaacaa acattacgtc aaaaaatacc CD 801 tgatggtttt caagttgctg aatctttatt tgatcatggt ttactcgatt CD 851 Tgattgttcc acgtaacctc tcgaaaggcg ttttgagtga aatatttgaa CD 901 ctttatggtt cagctccttg taaggaacgt aataattatt attttagata CD 951 a SQ SEQUENCE 317 AA; MSLMNWFEDK RRFGGLIGAF IEKATKGYVL SEREKDRYIK IDTTKGLWTR CDNCENMLYV RFLRQNRRIC EECGYHLQMS STERIELLID RGTWHPMDED MVARDVLRFS DEDSYKNRVT FYQKRTGLTD AIQTGIGKLD GTPVALGVMD FQFMGGSMGS VVGEKITRLI EYATRKSMPL IIVCSSGGAR MQEGTLSLMQ MAKISSVLQI HQAQKRLLYI PILTYPTTGG VTASFGMLGD IIIAEPKAYI AFAGKRVIEQ TLRQKIPDGF QVAESLFDHG LLDLIVPRNL SKGVLSEIFE LYGSAPCKER NNYYFR* // ID AB299142_9 STANDARD; PRT; 37 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psaI FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50120.1 FT PROTEIN_NAME : PSI I-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 14714 - 14824 FT DIRECTIONS : positive FT EDITING : 3 A(gcC) -> A(gcT) FT EDITING : 10 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 111 NT; CD 1 atgacagcCt cttacttacc ttccatttCt gtgcctctag taggtttagt CD 51 ctttccagca attacaatgg cttctttgtt tatatatatc gaacaagacg CD 101 aaatagtata a FT EDITED CDNA CD 1 atgacagcTt cttacttacc ttccatttTt gtgcctctag taggtttagt CD 51 ctttccagca attacaatgg cttctttgtt tatatatatc gaacaagacg CD 101 aaatagtata a SQ SEQUENCE 37 AA; MTASYLPSIF VPLVGLVFPA ITMASLFIYI EQDEIV* // ID AB299142_10 STANDARD; PRT; 185 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : ycf4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50121.1 FT PROTEIN_NAME : photosystem I assembly protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 15194 - 15748 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 43 H(Cac) -> Y(Tac) FT EDITING : 82 R(Cgt) -> C(Tgt) FT EDITING : 86 R(Cgg) -> W(Tgg) FT EDITING : 95 S(tCc) -> F(tTc) FT EDITING : 120 S(tCt) -> F(tTt) FT EDITING : 163 P(cCg) -> L(cTg) FT EDITING : 176 S(tCc) -> F(tTc) FT EDITING : 177 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 555 NT; CD 1 aCgaattggc aatctgaatg gcttcgagta gaacctataa taggttctag CD 51 aagaataagt aatttttgct gggcgtgcat tattccgttg ggtgcattag CD 101 gattcttttc agttggaatt tctagtCact tcggtaaaga tttaataccc CD 151 tttctatcat cccagcaaat tctttttgtc ccacaaggaa ttgtaatgtg CD 201 cttttatggt attgcaggtc tgtttctcag cctctattta tggCgtacaa CD 251 ttttgCggag tgtaggtagt ggctacaacc gatCcgataa acgagaaaaa CD 301 atcgtttgtc tttttcgttg gggattcccc ggagaaaatc gtcgtattcg CD 351 tatccaatCt ctcatgaaag atatccaagc aatacgtatg gagattcggg CD 401 aaggtattta tccccgtcgt atcctttata tgaaaataaa aggtcaacaa CD 451 gatgttcctt taactcgtat tgaggaaaac ttaactcCgg gagaaatgga CD 501 ggaaaaagct gcggagttgg ctcgatCctC gcgcgtatca atcgaaggac CD 551 tctaa FT EDITED CDNA CD 1 aTgaattggc aatctgaatg gcttcgagta gaacctataa taggttctag CD 51 aagaataagt aatttttgct gggcgtgcat tattccgttg ggtgcattag CD 101 gattcttttc agttggaatt tctagtTact tcggtaaaga tttaataccc CD 151 tttctatcat cccagcaaat tctttttgtc ccacaaggaa ttgtaatgtg CD 201 cttttatggt attgcaggtc tgtttctcag cctctattta tggTgtacaa CD 251 ttttgTggag tgtaggtagt ggctacaacc gatTcgataa acgagaaaaa CD 301 atcgtttgtc tttttcgttg gggattcccc ggagaaaatc gtcgtattcg CD 351 tatccaatTt ctcatgaaag atatccaagc aatacgtatg gagattcggg CD 401 aaggtattta tccccgtcgt atcctttata tgaaaataaa aggtcaacaa CD 451 gatgttcctt taactcgtat tgaggaaaac ttaactcTgg gagaaatgga CD 501 ggaaaaagct gcggagttgg ctcgatTctT gcgcgtatca atcgaaggac CD 551 tctaa SQ SEQUENCE 185 AA; MNWQSEWLRV EPIIGSRRIS NFCWACIIPL GALGFFSVGI SSYFGKDLIP FLSSQQILFV PQGIVMCFYG IAGLFLSLYL WCTILWSVGS GYNRFDKREK IVCLFRWGFP GENRRIRIQF LMKDIQAIRM EIREGIYPRR ILYMKIKGQQ DVPLTRIEEN LTLGEMEEKA AELARFLRVS IEGL* // ID AB299142_11 STANDARD; PRT; 511 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : ycf10 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50122.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 15893 - 17425 FT DIRECTIONS : positive FT EDITING : 83 S(tCa) -> L(tTa) FT EDITING : 306 S(tCt) -> F(tTt) FT EDITING : 399 A(gcC) -> A(gcT) FT EDITING : 407 P(cCa) -> L(cTa) FT EDITING : 415 S(tCa) -> L(tTa) FT EDITING : 433 S(tCt) -> F(tTt) FT EDITING : 436 P(cCc) -> L(cTc) FT EDITING : 437 P(cCa) -> L(cTa) FT EDITING : 441 P(cCa) -> L(cTa) FT EDITING : 442 R(Cgt) -> C(Tgt) FT EDITING : 489 R(Cgg) -> W(Tgg) FT EDITING : 508 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1533 NT; CD 1 atgaaatcat actgggcaca aaattcttgt tggttattaa atactccata CD 51 tcgttcctta gagagagctt atagagcgag caaacgaata cgatatataa CD 101 agaaaaatta tatgtgttat aaaggtatga tttcatcttc ggtacggtct CD 151 tggcaagcta taatgctata tatgaatacg aaattcaata attatgtatt CD 201 cataatatat tggagtctct tggaatgtag aattagcatg tatttctCaa CD 251 acttcttgaa taattcaata tttagaatat ttgaaaaaat ttctattttt CD 301 tctccaaaag cagctaatga gtattcgttt tccgtgagtc ttcatcaaca CD 351 tttttggatt ctctcaaatc tttcttttta taaggtttgg aataatctct CD 401 cgaatgtttt ttctttctct cctctccctc tcgattctac cggaaaattc CD 451 gttcaaaaga ctagtagaat ttccaaacga tatagatccg atcagagaag CD 501 tgaaaaggac tttaaagcta aaaacttttc tatttcgagt gattcagttg CD 551 agagggattc gaggaagatt gaacagatga ataagaaatt agcttggatc CD 601 gaagcaactt taaatgattt ggatacttgg aaacggtatc attttctttc CD 651 tgcttcttcc tccgagaaag aagaaacttt agaaaatcct ttttctttct CD 701 ccaattccaa aaattctatt actaccgcaa cagcttatga atctataggt CD 751 cttgtacctc gctccataac ccgtacctta tccggatttc agacagagtt CD 801 gacgggtcaa tcaagttcat tagtacttca agaatttcga gtggctaaat CD 851 atcaagcatt ggcttctcta caatatatgg gatgtttact atttctcccc CD 901 tggggaatct caatttCtct gaaagaatat tttttagaac cttgggttaa CD 951 gatttggtgg aatacatgtc aatcccaaat ttttcttaat tctcttcaag CD 1001 aagaaatagc attgaaacgg cttcaggagg tagaggaact tgtttggtta CD 1051 gataaagtga tggcgaattc ctcgaaagtt cagtcacaag atcttgatgt CD 1101 agaaattcac gaaaaaacaa ttcaattact aaaaacgtac aatggagata CD 1151 gtattcagac tattctacat ttattaacag atattatttg tttcgcCact CD 1201 ttgagtgttt cgtttattcC aggtaaagaa agacttgcta tttCaaattc CD 1251 ttgggttcaa gaattatttt atagcttgag tgatacgatg aaagcttCtt CD 1301 tcattcCccC attaactgat cCaCgtatcg gatttcattc gcctcatggc CD 1351 tgggaaatag ttataggttc cctcttagaa catttaggat tcgctcataa CD 1401 caaacatata atatcctgtt ttgtttcaac ctttccagtc attctagata CD 1451 cagtttctaa atatCggatt tttcgtcatt taaatcgtat atctccctct CD 1501 attgtagcaa cttatcatac gaCgaatgaa taa FT EDITED CDNA CD 1 atgaaatcat actgggcaca aaattcttgt tggttattaa atactccata CD 51 tcgttcctta gagagagctt atagagcgag caaacgaata cgatatataa CD 101 agaaaaatta tatgtgttat aaaggtatga tttcatcttc ggtacggtct CD 151 tggcaagcta taatgctata tatgaatacg aaattcaata attatgtatt CD 201 cataatatat tggagtctct tggaatgtag aattagcatg tatttctTaa CD 251 acttcttgaa taattcaata tttagaatat ttgaaaaaat ttctattttt CD 301 tctccaaaag cagctaatga gtattcgttt tccgtgagtc ttcatcaaca CD 351 tttttggatt ctctcaaatc tttcttttta taaggtttgg aataatctct CD 401 cgaatgtttt ttctttctct cctctccctc tcgattctac cggaaaattc CD 451 gttcaaaaga ctagtagaat ttccaaacga tatagatccg atcagagaag CD 501 tgaaaaggac tttaaagcta aaaacttttc tatttcgagt gattcagttg CD 551 agagggattc gaggaagatt gaacagatga ataagaaatt agcttggatc CD 601 gaagcaactt taaatgattt ggatacttgg aaacggtatc attttctttc CD 651 tgcttcttcc tccgagaaag aagaaacttt agaaaatcct ttttctttct CD 701 ccaattccaa aaattctatt actaccgcaa cagcttatga atctataggt CD 751 cttgtacctc gctccataac ccgtacctta tccggatttc agacagagtt CD 801 gacgggtcaa tcaagttcat tagtacttca agaatttcga gtggctaaat CD 851 atcaagcatt ggcttctcta caatatatgg gatgtttact atttctcccc CD 901 tggggaatct caatttTtct gaaagaatat tttttagaac cttgggttaa CD 951 gatttggtgg aatacatgtc aatcccaaat ttttcttaat tctcttcaag CD 1001 aagaaatagc attgaaacgg cttcaggagg tagaggaact tgtttggtta CD 1051 gataaagtga tggcgaattc ctcgaaagtt cagtcacaag atcttgatgt CD 1101 agaaattcac gaaaaaacaa ttcaattact aaaaacgtac aatggagata CD 1151 gtattcagac tattctacat ttattaacag atattatttg tttcgcTact CD 1201 ttgagtgttt cgtttattcT aggtaaagaa agacttgcta tttTaaattc CD 1251 ttgggttcaa gaattatttt atagcttgag tgatacgatg aaagcttTtt CD 1301 tcattcTccT attaactgat cTaTgtatcg gatttcattc gcctcatggc CD 1351 tgggaaatag ttataggttc cctcttagaa catttaggat tcgctcataa CD 1401 caaacatata atatcctgtt ttgtttcaac ctttccagtc attctagata CD 1451 cagtttctaa atatTggatt tttcgtcatt taaatcgtat atctccctct CD 1501 attgtagcaa cttatcatac gaTgaatgaa taa SQ SEQUENCE 511 AA; MKSYWAQNSC WLLNTPYRSL ERAYRASKRI RYIKKNYMCY KGMISSSVRS WQAIMLYMNT KFNNYVFIIY WSLLECRISM YFLNFLNNSI FRIFEKISIF SPKAANEYSF SVSLHQHFWI LSNLSFYKVW NNLSNVFSFS PLPLDSTGKF VQKTSRISKR YRSDQRSEKD FKAKNFSISS DSVERDSRKI EQMNKKLAWI EATLNDLDTW KRYHFLSASS SEKEETLENP FSFSNSKNSI TTATAYESIG LVPRSITRTL SGFQTELTGQ SSSLVLQEFR VAKYQALASL QYMGCLLFLP WGISIFLKEY FLEPWVKIWW NTCQSQIFLN SLQEEIALKR LQEVEELVWL DKVMANSSKV QSQDLDVEIH EKTIQLLKTY NGDSIQTILH LLTDIICFAT LSVSFILGKE RLAILNSWVQ ELFYSLSDTM KAFFILLLTD LCIGFHSPHG WEIVIGSLLE HLGFAHNKHI ISCFVSTFPV ILDTVSKYWI FRHLNRISPS IVATYHTMNE * // ID AB299142_12 STANDARD; PRT; 322 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : petA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50123.1 FT PROTEIN_NAME : cytochrome f FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 17634 - 18599 FT DIRECTIONS : positive FT EDITING : 60 R(Cgt) -> C(Tgt) FT EDITING : 81 P(CCt) -> F(TTt) FT EDITING : 111 P(cCt) -> L(cTt) FT EDITING : 113 S(tCa) -> L(tTa) FT EDITING : 164 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 966 NT; CD 1 atgcaaaaaa gaaatattag tcactggatg aggaagtggg tgattcgatc CD 51 ggttccgatc ctgatcgtga tgatgagaat aatagcttgg ccatctattt CD 101 ccgaagcata tccgatttat gcgcagcagg gttacgaaga tcctcgagaa CD 151 gcaactggcc gtattgtatg tgccaatCgt cacttggcta aaaaatccgt CD 201 ggatattgaa gttccacagt ctgtacttcc agacacagtt CCtgaggctg CD 251 ttgttaaaat tccgtatgat atacaagtaa aacaagtcct tgctaatggt CD 301 aaaaaaggag ctttgaatgt aggagctgtt cCtatttCac ctgagggatt CD 351 cgaattagcc cctcccgatc gtatccctcc cgaaatgaag ggaagaatag CD 401 gtaatcttta ttttcaacct tatcgtcccg acaaaagaaa tattcttgta CD 451 ataggtcccg ttcctggtaa aaaatatagt gaaattgtct Ctcccattct CD 501 ttcaccagat cctggtacta ataaagaagc tcacttcttg aaatatccca CD 551 tatatgtggg tggtaataga ggaaggggac aaatctatcc cgatggaagt CD 601 aaaagcaaca atactgttta taacgcttca gccacaggta aagtaagtag CD 651 aatcttacgt aaggaaaaag gtggatatga aataactatt gataatacat CD 701 tagatggtcg tcaagtaatg gatatcgtac ccccaggacc agaacttatt CD 751 atcacggaag gtgagtttat taaggtggat cagcctttaa ctaataatcc CD 801 caatgtaggt ggatttggtc aaggagatgc agaagtagta cttcaagatc CD 851 ctttacgtgt tcaaggtctt ttattattct ttgcatcagt tatattagca CD 901 caaatattct tagtacttaa aaagaaacaa tttgagaaag ttcaattagc CD 951 tgagatgaat ttttag FT EDITED CDNA CD 1 atgcaaaaaa gaaatattag tcactggatg aggaagtggg tgattcgatc CD 51 ggttccgatc ctgatcgtga tgatgagaat aatagcttgg ccatctattt CD 101 ccgaagcata tccgatttat gcgcagcagg gttacgaaga tcctcgagaa CD 151 gcaactggcc gtattgtatg tgccaatTgt cacttggcta aaaaatccgt CD 201 ggatattgaa gttccacagt ctgtacttcc agacacagtt TTtgaggctg CD 251 ttgttaaaat tccgtatgat atacaagtaa aacaagtcct tgctaatggt CD 301 aaaaaaggag ctttgaatgt aggagctgtt cTtatttTac ctgagggatt CD 351 cgaattagcc cctcccgatc gtatccctcc cgaaatgaag ggaagaatag CD 401 gtaatcttta ttttcaacct tatcgtcccg acaaaagaaa tattcttgta CD 451 ataggtcccg ttcctggtaa aaaatatagt gaaattgtct Ttcccattct CD 501 ttcaccagat cctggtacta ataaagaagc tcacttcttg aaatatccca CD 551 tatatgtggg tggtaataga ggaaggggac aaatctatcc cgatggaagt CD 601 aaaagcaaca atactgttta taacgcttca gccacaggta aagtaagtag CD 651 aatcttacgt aaggaaaaag gtggatatga aataactatt gataatacat CD 701 tagatggtcg tcaagtaatg gatatcgtac ccccaggacc agaacttatt CD 751 atcacggaag gtgagtttat taaggtggat cagcctttaa ctaataatcc CD 801 caatgtaggt ggatttggtc aaggagatgc agaagtagta cttcaagatc CD 851 ctttacgtgt tcaaggtctt ttattattct ttgcatcagt tatattagca CD 901 caaatattct tagtacttaa aaagaaacaa tttgagaaag ttcaattagc CD 951 tgagatgaat ttttag SQ SEQUENCE 322 AA; MQKRNISHWM RKWVIRSVPI LIVMMRIIAW PSISEAYPIY AQQGYEDPRE ATGRIVCANC HLAKKSVDIE VPQSVLPDTV FEAVVKIPYD IQVKQVLANG KKGALNVGAV LILPEGFELA PPDRIPPEMK GRIGNLYFQP YRPDKRNILV IGPVPGKKYS EIVFPILSPD PGTNKEAHFL KYPIYVGGNR GRGQIYPDGS KSNNTVYNAS ATGKVSRILR KEKGGYEITI DNTLDGRQVM DIVPPGPELI ITEGEFIKVD QPLTNNPNVG GFGQGDAEVV LQDPLRVQGL LLFFASVILA QIFLVLKKKQ FEKVQLAEMN F* // ID AB299142_13 STANDARD; PRT; 41 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbJ FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50124.1 FT PROTEIN_NAME : photosystem II J-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 19794 - 19916 FT DIRECTIONS : negative FT EDITING : 20 P(cCc) -> L(cTc) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 34 S(tcC) -> S(tcT) FT EDITING : 36 S(tCa) -> L(tTa) FT EDITING : 39 P(Ccc) -> S(Tcc) FT EDITING : 40 L(Cta) -> L(Tta) FT CODON_START : 1 CL CDNALEN 123 NT; CD 1 atggccaata ccaccggaag gattcctctg tggttaatag gtactgtagc CD 51 tggtatccCc gtgatcggtt Cagtaggcat ctttttctat ggctcatact CD 101 cCggatCagg gtcaCccCta tag FT EDITED CDNA CD 1 atggccaata ccaccggaag gattcctctg tggttaatag gtactgtagc CD 51 tggtatccTc gtgatcggtt Tagtaggcat ctttttctat ggctcatact CD 101 cTggatTagg gtcaTccTta tag SQ SEQUENCE 41 AA; MANTTGRIPL WLIGTVAGIL VIGLVGIFFY GSYSGLGSSL * // ID AB299142_14 STANDARD; PRT; 39 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50125.1 FT PROTEIN_NAME : photosystem II L-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 20030 - 20146 FT DIRECTIONS : negative FT EDITING : 31 P(cCa) -> L(cTa) FT EDITING : 33 P(Cct) -> S(Tct) FT EDITING : 39 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 atgacacaac cgaacccaaa caaacaaagt gtagaattaa accgtaccag CD 51 cctctattgg ggattgttac ttattttcgt actggctgtt cCattcCcta CD 101 atcacttctt taatCaa FT EDITED CDNA CD 1 atgacacaac cgaacccaaa caaacaaagt gtagaattaa accgtaccag CD 51 cctctattgg ggattgttac ttattttcgt actggctgtt cTattcTcta CD 101 atcacttctt taatTaa SQ SEQUENCE 39 AA; MTQPNPNKQS VELNRTSLYW GLLLIFVLAV LFSNHFFN* // ID AB299142_15 STANDARD; PRT; 40 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbF FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50126.1 FT PROTEIN_NAME : photosystem II cytochrome b559 4 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 20169 - 20288 FT DIRECTIONS : negative FT EDITING : 26 L(Ctt) -> F(Ttt) FT EDITING : 28 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 120 NT; CD 1 atgactatag atagaaccta tccaattttc acagttaggt ggttggctgt CD 51 tcacggacta gctgtaccta cagttCtttt ctCaggatcg atatcggcaa CD 101 tgcagtttat ccaacgataa FT EDITED CDNA CD 1 atgactatag atagaaccta tccaattttc acagttaggt ggttggctgt CD 51 tcacggacta gctgtaccta cagttTtttt ctTaggatcg atatcggcaa CD 101 tgcagtttat ccaacgataa SQ SEQUENCE 40 AA; MTIDRTYPIF TVRWLAVHGL AVPTVFFLGS ISAMQFIQR* // ID AB299142_16 STANDARD; PRT; 84 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbE FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50127.1 FT PROTEIN_NAME : photosystem II cytochrome b559 8 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 20298 - 20549 FT DIRECTIONS : negative FT EDITING : 20 R(Cgg) -> W(Tgg) FT EDITING : 30 S(tCg) -> L(tTg) FT EDITING : 35 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 252 NT; CD 1 atgtctggga atacgggaga gcgccctttc gccgacatca ttaccagtat CD 51 tcgatatCgg gtgattcata gcatcactat accctcctCg ttcattgcag CD 101 gtCggttatt tgttagcaca ggtttggctt acgatgtgtt tggaagccct CD 151 cggccgaatg aatatttcac ggagagccga caagaggttc ctttaattac CD 201 cggtcgtttc aattcactgg aacaagttga tgaattcact agatcctttt CD 251 ag FT EDITED CDNA CD 1 atgtctggga atacgggaga gcgccctttc gccgacatca ttaccagtat CD 51 tcgatatTgg gtgattcata gcatcactat accctcctTg ttcattgcag CD 101 gtTggttatt tgttagcaca ggtttggctt acgatgtgtt tggaagccct CD 151 cggccgaatg aatatttcac ggagagccga caagaggttc ctttaattac CD 201 cggtcgtttc aattcactgg aacaagttga tgaattcact agatcctttt CD 251 ag SQ SEQUENCE 84 AA; MSGNTGERPF ADIITSIRYW VIHSITIPSL FIAGWLFVST GLAYDVFGSP RPNEYFTESR QEVPLITGRF NSLEQVDEFT RSF* // ID AB303860_1 STANDARD; PRT; 41 AA. AC AB303860; DT Tue Jul 21 07:00:13 2009 DE Beta vulgaris subsp. maritima mitochondrial DNA, region4, atp6 gene OS mitochondrion Beta vulgaris subsp. maritima OC Beta vulgaris subsp. maritima RN [1] RL Genetics 177 (3), 1703-1712 (2007) RL PUBMED 17720920 FT C-terminal not determined FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF93948.1 FT PROTEIN_NAME : F0F1-ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 770 - 890 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 121 NT; CD 1 aCgattacgc ccaacagccc acttgagcaa ttttccattc tcccattgat CD 51 tcctatgaaa ataggaaact tgtatttctc attcacaaat ccatctttgt CD 101 ttatgctgct aactctcagt t FT EDITED CDNA CD 1 aTgattacgc ccaacagccc acttgagcaa ttttccattc tcccattgat CD 51 tcctatgaaa ataggaaact tgtatttctc attcacaaat ccatctttgt CD 101 ttatgctgct aactctcagt t SQ SEQUENCE 41 AA; MITPNSPLEQ FSILPLIPMK IGNLYFSFTN PSLFMLLTLS X // ID AB367138_2 STANDARD; PRT; 32 AA. AC AB367138; DT Tue Jul 21 07:00:14 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : petL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50143.1 FT PROTEIN_NAME : cytochrome b6/f complex subunit VI FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1896 - 1991 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 21 S(tCa) -> L(tTa) FT EDITING : 32 Q(Cag) -> *(Tag) FT CODON_START : 1 CL CDNALEN 96 NT; CD 1 aCgcttacta caatcagcta tttcgcattt ctatttgctg cttcaatttc CD 51 agctttagtt tCatttattg gcttaaacaa aatacaactt attCag FT EDITED CDNA CD 1 aTgcttacta caatcagcta tttcgcattt ctatttgctg cttcaatttc CD 51 agctttagtt tTatttattg gcttaaacaa aatacaactt attTag SQ SEQUENCE 32 AA; MLTTISYFAF LFAASISALV LFIGLNKIQL I* // ID AB367138_3 STANDARD; PRT; 38 AA. AC AB367138; DT Tue Jul 21 07:00:14 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : petG FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50144.1 FT PROTEIN_NAME : cytochrome b6/f complex subunit V FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2117 - 2230 FT DIRECTIONS : positive FT EDITING : 11 S(tCg) -> L(tTg) FT EDITING : 38 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 114 NT; CD 1 atggttgaag ctttgctgtc tggaattgtg tCggggttga ttccaataac CD 51 tctagctgga ttattcgtaa ctgcctattt gcaatatcgg cgtggcgatc CD 101 aattagatct tCga FT EDITED CDNA CD 1 atggttgaag ctttgctgtc tggaattgtg tTggggttga ttccaataac CD 51 tctagctgga ttattcgtaa ctgcctattt gcaatatcgg cgtggcgatc CD 101 aattagatct tTga SQ SEQUENCE 38 AA; MVEALLSGIV LGLIPITLAG LFVTAYLQYR RGDQLDL* // ID AB367138_5 STANDARD; PRT; 66 AA. AC AB367138; DT Tue Jul 21 07:00:14 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : rpl33 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50146.1 FT PROTEIN_NAME : ribosomal protein L33 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3746 - 3943 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 60 H(caC) -> H(caT) FT CODON_START : 1 CL CDNALEN 198 NT; CD 1 aCggctaaga atagagatgt aagagtaacc attactttgg aatgtactag CD 51 ttgtgctcaa aatggtgaaa aaataaaatt aggtgtttct agatatacta CD 101 ctaaaaaaaa tcgtcgtaat acacccactc gattggaatt gaagaaattt CD 151 tgtccttatt gtaataagca tactattcaC aaagaaataa aaaaataa FT EDITED CDNA CD 1 aTggctaaga atagagatgt aagagtaacc attactttgg aatgtactag CD 51 ttgtgctcaa aatggtgaaa aaataaaatt aggtgtttct agatatacta CD 101 ctaaaaaaaa tcgtcgtaat acacccactc gattggaatt gaagaaattt CD 151 tgtccttatt gtaataagca tactattcaT aaagaaataa aaaaataa SQ SEQUENCE 66 AA; MAKNRDVRVT ITLECTSCAQ NGEKIKLGVS RYTTKKNRRN TPTRLELKKF CPYCNKHTIH KEIKK* // ID AB367138_6 STANDARD; PRT; 76 AA. AC AB367138; DT Tue Jul 21 07:00:14 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : rps18 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50147.1 FT PROTEIN_NAME : ribosomal protein S18 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3974 - 4201 FT DIRECTIONS : positive FT EDITING : 67 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 228 NT; CD 1 atgaacaaat ccaagcgatc ttctcgtaga cgtttgccac ccatcagatc CD 51 gggagatatt ttggattata aaaatataaa tttacttcgc agatttatta CD 101 gcgaacaggg aaaaattcta tctagacgaa tgaatagatt aacctcgaaa CD 151 caacaacgct taatgactat tgctattaaa cgagctcggg ttttagcttC CD 201 attacctttt cttaataacg aaaattaa FT EDITED CDNA CD 1 atgaacaaat ccaagcgatc ttctcgtaga cgtttgccac ccatcagatc CD 51 gggagatatt ttggattata aaaatataaa tttacttcgc agatttatta CD 101 gcgaacaggg aaaaattcta tctagacgaa tgaatagatt aacctcgaaa CD 151 caacaacgct taatgactat tgctattaaa cgagctcggg ttttagcttT CD 201 attacctttt cttaataacg aaaattaa SQ SEQUENCE 76 AA; MNKSKRSSRR RLPPIRSGDI LDYKNINLLR RFISEQGKIL SRRMNRLTSK QQRLMTIAIK RARVLALLPF LNNEN* // ID AB367138_8 STANDARD; PRT; 205 AA. AC AB367138; DT Tue Jul 21 07:00:14 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : clpP FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50149.1 FT PROTEIN_NAME : ATP-dependent Clp protease proteolytic subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 24/2 FT INTRON 122/0 FT EDITING : 20 R(Cgg) -> W(Tgg) FT EDITING : 27 L(ctC) -> L(ctT) FT EDITING : 28 H(Cat) -> Y(Tat) FT EDITING : 35 P(cCa) -> L(cTa) FT EDITING : 45 N(aaC) -> N(aaT) FT EDITING : 47 P(cCc) -> L(cTc) FT EDITING : 88 A(gCa) -> V(gTa) FT EDITING : 106 T(aCc) -> I(aTc) FT EDITING : 107 S(tCa) -> L(tTa) FT EDITING : 142 T(aCg) -> M(aTg) FT EDITING : 195 T(aCa) -> I(aTa) FT EDITING : 199 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 615 NT; CD 1 atgcccattg gtgttccaaa agtgcctttt aggctccccg gagaagaaga CD 51 tgctgttCgg atcgacgtat acaatcgact CCatcgagaa aggttactct CD 101 ttcCaggcca acacgtagat gacgaaatcg cgaaCcaacC cattggtatt CD 151 atgatgtacc tgaatggaga agatgaaagt aaagatatgt atttatatat CD 201 taactctccc ggtggagcag tattagcagg aatatctgtt tatgatgcta CD 251 tgcaatttgt agCaccggat gtacacacaa tttgcatggg attagctgct CD 301 tcaatgggat ctttcaCctC aactggaggg gaaattacta aacgtatagc CD 351 gctaccccac gctagggtaa tgatccatca acctgctagt tcctactacg CD 401 atggacaagc gggagaatgt attaCggaag cagaagaagt attaaaactt CD 451 cgcgactgca ttaccaaggt ctatgtacaa aggacaggca agccattatg CD 501 gatcatttcc gaagatatgg aaagagatgt tttcatgtca gcagaagaag CD 551 caaaagttta tggcattgtt gatttcgtag ctaCagaaac tgcttCaaat CD 601 tctccaacga attaa FT EDITED CDNA CD 1 atgcccattg gtgttccaaa agtgcctttt aggctccccg gagaagaaga CD 51 tgctgttTgg atcgacgtat acaatcgact TTatcgagaa aggttactct CD 101 ttcTaggcca acacgtagat gacgaaatcg cgaaTcaacT cattggtatt CD 151 atgatgtacc tgaatggaga agatgaaagt aaagatatgt atttatatat CD 201 taactctccc ggtggagcag tattagcagg aatatctgtt tatgatgcta CD 251 tgcaatttgt agTaccggat gtacacacaa tttgcatggg attagctgct CD 301 tcaatgggat ctttcaTctT aactggaggg gaaattacta aacgtatagc CD 351 gctaccccac gctagggtaa tgatccatca acctgctagt tcctactacg CD 401 atggacaagc gggagaatgt attaTggaag cagaagaagt attaaaactt CD 451 cgcgactgca ttaccaaggt ctatgtacaa aggacaggca agccattatg CD 501 gatcatttcc gaagatatgg aaagagatgt tttcatgtca gcagaagaag CD 551 caaaagttta tggcattgtt gatttcgtag ctaTagaaac tgcttTaaat CD 601 tctccaacga attaa SQ SEQUENCE 205 AA; MPIGVPKVPF RLPGEEDAVW IDVYNRLYRE RLLFLGQHVD DEIANQLIGI MMYLNGEDES KDMYLYINSP GGAVLAGISV YDAMQFVVPD VHTICMGLAA SMGSFILTGG EITKRIALPH ARVMIHQPAS SYYDGQAGEC IMEAEEVLKL RDCITKVYVQ RTGKPLWIIS EDMERDVFMS AEEAKVYGIV DFVAIETALN SPTN* // ID AM600641_1 STANDARD; PRT; 88 AA. AC AM600641; DT Tue Jul 21 07:01:36 2009 DE Asplenium nidus mitochondrial genes atp9, nad1 (partial), nad4L, OS mitochondrion Asplenium nidus (bird's-nest fern) OC Asplenium nidus RN [1] RL Unpublished FT N-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAM82798.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 9 - 270 FT DIRECTIONS : positive FT EDITING : 55 L(tTa) -> S(tCa) FT EDITING : 87 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 262 NT; CD 1 tcctagtctg tgtacaccgc ctctcccggg aggttggcca cccattttag CD 51 atcttcccag tttccgggga accccaggct caatctggtt tggcataaag CD 101 gttattttat ttccgtttgt atatatatgg gtttgcgcag catttcctcg CD 151 atatcgttat gatTaaccaa cgagacctgg acggaaagtc ttcccgcctt CD 201 tatcattagc tcgggtagtg tttgtatttg gcgttctagt agcctttgac CD 251 cggctacccC aa FT EDITED CDNA CD 1 tcctagtctg tgtacaccgc ctctcccggg aggttggcca cccattttag CD 51 atcttcccag tttccgggga accccaggct caatctggtt tggcataaag CD 101 gttattttat ttccgtttgt atatatatgg gtttgcgcag catttcctcg CD 151 atatcgttat gatCaaccaa cgagacctgg acggaaagtc ttcccgcctt CD 201 tatcattagc tcgggtagtg tttgtatttg gcgttctagt agcctttgac CD 251 cggctacccT aa SQ SEQUENCE 88 AA; S*SVYTASPG RLATHFRSSQ FPGNPRLNLV WHKGYFISVC IYMGLRSISS ISL*STNETW TESLPAFIIS SGSVCIWRSS SL*PATLX // ID AM600641_2 STANDARD; PRT; 101 AA. AC AM600641; DT Tue Jul 21 07:01:36 2009 DE Asplenium nidus mitochondrial genes atp9, nad1 (partial), nad4L, OS mitochondrion Asplenium nidus (bird's-nest fern) OC Asplenium nidus RN [1] RL Unpublished FT Full length CDS FT GENE : nad4L FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAM82799.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 10057 - 10359 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 4 V(gtC) -> V(gtT) FT EDITING : 14 S(tCt) -> F(tTt) FT EDITING : 16 S(tCa) -> L(tTa) FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 29 T(aCt) -> I(aTt) FT EDITING : 32 P(cCg) -> L(cTg) FT EDITING : 33 T(aCg) -> M(aTg) FT EDITING : 34 L(CTa) -> S(TCa) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 39 P(cCa) -> L(cTa) FT EDITING : 47 P(cCg) -> L(cTg) FT EDITING : 53 S(tCg) -> L(tTg) FT EDITING : 59 *(Taa) -> Q(Caa) FT EDITING : 61 L(Ctc) -> F(Ttc) FT EDITING : 63 S(tCa) -> L(tTa) FT EDITING : 70 V(gTt) -> A(gCt) FT EDITING : 85 *(Tga) -> R(Cga) FT EDITING : 95 P(cCt) -> L(cTt) FT EDITING : 101 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatctgg tCaaatattt gacattttcc atgattctct CtctttCagg CD 51 tattCgggga attctcttga atagaagaaa tattaCtatt atgcCgaCgC CD 101 TaattgagtC aatgcCattg gctgttaatt tgaactttcC ggtattttct CD 151 gtctattCgg atgatatgat gggtTaatta CtcgcctCac tagtgttaac CD 201 ggtggcagTt gcggaatccg caattgggct ggccattctg gtggtaactt CD 251 tcTgaattcg cgggaccatt gccgtggaat tccCtaattg catgaagggt CD 301 Cga FT EDITED CDNA CD 1 aTggatctgg tTaaatattt gacattttcc atgattctct TtctttTagg CD 51 tattTgggga attctcttga atagaagaaa tattaTtatt atgcTgaTgT CD 101 CaattgagtT aatgcTattg gctgttaatt tgaactttcT ggtattttct CD 151 gtctattTgg atgatatgat gggtCaatta TtcgcctTac tagtgttaac CD 201 ggtggcagCt gcggaatccg caattgggct ggccattctg gtggtaactt CD 251 tcCgaattcg cgggaccatt gccgtggaat tccTtaattg catgaagggt CD 301 Tga SQ SEQUENCE 101 AA; MDLVKYLTFS MILFLLGIWG ILLNRRNIII MLMSIELMLL AVNLNFLVFS VYLDDMMGQL FALLVLTVAA AESAIGLAIL VVTFRIRGTI AVEFLNCMKG * // ID AM600641_3 STANDARD; PRT; 75 AA. AC AM600641; DT Tue Jul 21 07:01:36 2009 DE Asplenium nidus mitochondrial genes atp9, nad1 (partial), nad4L, OS mitochondrion Asplenium nidus (bird's-nest fern) OC Asplenium nidus RN [1] RL Unpublished FT Full length CDS FT GENE : atp9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAM82800.1 FT PROTEIN_NAME : ATP synthase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 18147 - 18371 FT DIRECTIONS : positive FT EDITING : 2 L(Cta) -> L(Tta) FT EDITING : 37 *(Tga) -> R(Cga) FT EDITING : 44 *(Taa) -> Q(Caa) FT EDITING : 49 V(gTt) -> A(gCt) FT EDITING : 50 T(aCt) -> I(aTt) FT EDITING : 51 S(tCa) -> L(tTa) FT EDITING : 62 S(tCt) -> F(tTt) FT EDITING : 65 T(aCg) -> M(aTg) FT EDITING : 66 T(aCg) -> M(aTg) FT EDITING : 69 S(tCa) -> L(tTa) FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgCtagaag gtgcaaaatt gattggagca ggagcggcta ccatagcctt CD 51 agcaggagca gcagtaggta ttggaaacgt atttagttct ttgataagct CD 101 ctgtggcgTg aaatccatca ttagctaaaT aattattcgg ttatgTtaCt CD 151 tCaggctttg ccttaacgga agctattgcc ctgtCtgctt taaCgaCggc CD 201 cttctCaatt ttattcgtat ttCga FT EDITED CDNA CD 1 atgTtagaag gtgcaaaatt gattggagca ggagcggcta ccatagcctt CD 51 agcaggagca gcagtaggta ttggaaacgt atttagttct ttgataagct CD 101 ctgtggcgCg aaatccatca ttagctaaaC aattattcgg ttatgCtaTt CD 151 tTaggctttg ccttaacgga agctattgcc ctgtTtgctt taaTgaTggc CD 201 cttctTaatt ttattcgtat ttTga SQ SEQUENCE 75 AA; MLEGAKLIGA GAATIALAGA AVGIGNVFSS LISSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI LFVF* // ID AP005672_41 STANDARD; PRT; 101 AA. AC AP005672; DT Tue Jul 21 07:02:08 2009 DE Physcomitrella patens subsp. patens chloroplast DNA, complete OS chloroplast Physcomitrella patens subsp. patens OC Physcomitrella patens subsp. patens RN [1] RL . RL PUBMED 12084583 FT Full length CDS FT GENE : rps14 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC85054.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 40431 - 40733 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggcaaaaa aaagtcttat tgaaagagaa aaaaaaagac aaaaattaga CD 51 aaaaaaatat caagattttc gtcactctat aaaaaaaaaa attaaggaaa CD 101 cttcatcctt agatgaaaaa tgggaatttc aaaaacaatt acaagcttta CD 151 ccacgtaata gcgcacctac aagacttcat cgtcgttgtt ttttaaccgg CD 201 aagacctaga gcaaattatc gtgattttgg cttatctagg catgtattac CD 251 gagaaatggc tcatgcatgt tttttacctg gagtaactaa atctagttgg CD 301 taa FT EDITED CDNA CD 1 aTggcaaaaa aaagtcttat tgaaagagaa aaaaaaagac aaaaattaga CD 51 aaaaaaatat caagattttc gtcactctat aaaaaaaaaa attaaggaaa CD 101 cttcatcctt agatgaaaaa tgggaatttc aaaaacaatt acaagcttta CD 151 ccacgtaata gcgcacctac aagacttcat cgtcgttgtt ttttaaccgg CD 201 aagacctaga gcaaattatc gtgattttgg cttatctagg catgtattac CD 251 gagaaatggc tcatgcatgt tttttacctg gagtaactaa atctagttgg CD 301 taa SQ SEQUENCE 101 AA; MAKKSLIERE KKRQKLEKKY QDFRHSIKKK IKETSSLDEK WEFQKQLQAL PRNSAPTRLH RRCFLTGRPR ANYRDFGLSR HVLREMAHAC FLPGVTKSSW * // ID AP006444_4 STANDARD; PRT; 395 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : nad7 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98848.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 7 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 48/2 FT INTRON 71/2 FT INTRON 227/1 FT INTRON 308/2 FT EDITING : 71 D(gaC) -> D(gaT) FT EDITING : 82 H(Cat) -> Y(Tat) FT EDITING : 84 S(tCa) -> L(tTa) FT EDITING : 106 R(Cgt) -> C(Tgt) FT EDITING : 112 S(tCa) -> L(tTa) FT EDITING : 115 S(tCa) -> L(tTa) FT EDITING : 193 S(tCa) -> L(tTa) FT EDITING : 227 P(Cca) -> S(Tca) FT EDITING : 233 S(tCg) -> L(tTg) FT EDITING : 242 H(Cat) -> Y(Tat) FT EDITING : 245 S(tCg) -> L(tTg) FT EDITING : 247 P(CCt) -> F(TTt) FT EDITING : 257 R(Cgc) -> C(Tgc) FT EDITING : 309 S(tCa) -> L(tTa) FT EDITING : 321 S(tcC) -> S(tcT) FT EDITING : 350 P(ccC) -> P(ccT) FT EDITING : 353 R(Cgt) -> C(Tgt) FT EDITING : 363 S(tCa) -> L(tTa) FT EDITING : 368 S(tCt) -> F(tTt) FT EDITING : 375 P(cCa) -> L(cTa) FT EDITING : 379 V(gtC) -> V(gtT) FT CODON_START : 1 CL CDNALEN 1185 NT; CD 1 atgacgacta ggaaaaggca aatcaaaaat tttacttcga attttggacc CD 51 tcaacatcct gctgctcatg gtgtttcacg attagtattg gaaatgaacg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggatcact ccatagaggg CD 151 actgagaaat taatagagta caaaacttat cttcaagctt taccttattc CD 201 tgatcgttca gaCtatgttt ctatgatggc ccaagaacac gctCattctt CD 251 Cagctgtaga gaaacttttg aattgcgagg taccattacg agctcaatat CD 301 atacgagtgt tattcCgtga aataactcga atttCaaatc attCacttgc CD 351 tttaactact catgctatgg atgtgggagc attaactccg ttcctgtggg CD 401 cttttgagga gcgggagaaa ttgttggaat tctatgaaag agtctcggga CD 451 gccaggatgc atgccagttt catacgacca ggtggagtgg cacaagatct CD 501 gcctcttggc ttatgtcgag atattgattc cttcacacaa caatttgctt CD 551 ctcgtatcga tgaattagaa gagatgtCaa ccggcaaccg tatctggaaa CD 601 caacgattag tggatattgg tactgtcact gcacagcaag caaaggattg CD 651 gggattcagt ggtgtaatgt taagaggtCc aggggtatgc tgggattCgc CD 701 gaagagcagc accttacgat gttCatgacc aatCggatCC tgacgtacca CD 751 gtaggtacca gaggagatCg ctatgatcgt tactgtatcc gtatcgaaga CD 801 gatgcgacaa agtcttcgga tcattgtgca atgtcttaat caaatgccta CD 851 gcggcatgat caaagccgat gatcgtaagc tatgtcctcc atcacgatgt CD 901 cgaatgaaac tatccatgga atcctCaatt caccatttcg aactttatac CD 951 agaaggtttt tcCgtaccag cttcttctac ctataccgca gttgaagcac CD 1001 ctaaaggaga atttggtgtc tttctggtca gtaatggaag caatcgtccC CD 1051 taccgtCgta aaataagagc acccggcttt gcccattCac aaggactcga CD 1101 ttCtatgtcc aaacatcaca tgcCagcaga tgtggtCacc atcataggta CD 1151 ctcaagatat tgtgtttgga gaggtggata gatag FT EDITED CDNA CD 1 atgacgacta ggaaaaggca aatcaaaaat tttacttcga attttggacc CD 51 tcaacatcct gctgctcatg gtgtttcacg attagtattg gaaatgaacg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggatcact ccatagaggg CD 151 actgagaaat taatagagta caaaacttat cttcaagctt taccttattc CD 201 tgatcgttca gaTtatgttt ctatgatggc ccaagaacac gctTattctt CD 251 Tagctgtaga gaaacttttg aattgcgagg taccattacg agctcaatat CD 301 atacgagtgt tattcTgtga aataactcga atttTaaatc attTacttgc CD 351 tttaactact catgctatgg atgtgggagc attaactccg ttcctgtggg CD 401 cttttgagga gcgggagaaa ttgttggaat tctatgaaag agtctcggga CD 451 gccaggatgc atgccagttt catacgacca ggtggagtgg cacaagatct CD 501 gcctcttggc ttatgtcgag atattgattc cttcacacaa caatttgctt CD 551 ctcgtatcga tgaattagaa gagatgtTaa ccggcaaccg tatctggaaa CD 601 caacgattag tggatattgg tactgtcact gcacagcaag caaaggattg CD 651 gggattcagt ggtgtaatgt taagaggtTc aggggtatgc tgggattTgc CD 701 gaagagcagc accttacgat gttTatgacc aatTggatTT tgacgtacca CD 751 gtaggtacca gaggagatTg ctatgatcgt tactgtatcc gtatcgaaga CD 801 gatgcgacaa agtcttcgga tcattgtgca atgtcttaat caaatgccta CD 851 gcggcatgat caaagccgat gatcgtaagc tatgtcctcc atcacgatgt CD 901 cgaatgaaac tatccatgga atcctTaatt caccatttcg aactttatac CD 951 agaaggtttt tcTgtaccag cttcttctac ctataccgca gttgaagcac CD 1001 ctaaaggaga atttggtgtc tttctggtca gtaatggaag caatcgtccT CD 1051 taccgtTgta aaataagagc acccggcttt gcccattTac aaggactcga CD 1101 ttTtatgtcc aaacatcaca tgcTagcaga tgtggtTacc atcataggta CD 1151 ctcaagatat tgtgtttgga gaggtggata gatag SQ SEQUENCE 395 AA; MTTRKRQIKN FTSNFGPQHP AAHGVSRLVL EMNGEVVERA EPHIGSLHRG TEKLIEYKTY LQALPYSDRS DYVSMMAQEH AYSLAVEKLL NCEVPLRAQY IRVLFCEITR ILNHLLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMLTGNRIWK QRLVDIGTVT AQQAKDWGFS GVMLRGSGVC WDLRRAAPYD VYDQLDFDVP VGTRGDCYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC RMKLSMESLI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRCKIRAPGF AHLQGLDFMS KHHMLADVVT IIGTQDIVFG EVDR* // ID AP006444_8 STANDARD; PRT; 159 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : orfB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98852.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 11287 - 11763 FT DIRECTIONS : negative FT EDITING : 101 I(atC) -> I(atT) FT EDITING : 130 S(tCa) -> L(tTa) FT EDITING : 136 I(atC) -> I(atT) FT CODON_START : 1 CL CDNALEN 477 NT; CD 1 atgcctcaac tggataaatt cacttatttt tcacaattct tctggttatg CD 51 ccttttcttc tttactttct atattttcat atgcaatgat ggagatggag CD 101 tacttgggat cagcagaatt ctaaaactac ggaaccaact gctttcacac CD 151 cgggggaaga ccatccagag caaggacccc aacagtttgg aagatctctt CD 201 gagaaaaggt tttagcactg gtgtatccta tatgtatgct agtttattcg CD 251 aagtatccca atggtgtaag gccgtcgact tattgggaaa aaggaggaaa CD 301 atCactttga tctcttgttt cggagaaata agtggctcac gaggaatgga CD 351 aagaaacata ttatataata tatcgaagtc ctctccttCa aatactggaa CD 401 ggtggatCac ttgtaggaat tgtaggaatg acataatgct aatccatgtt CD 451 gtacatggcc aaggaagcat aaaatga FT EDITED CDNA CD 1 atgcctcaac tggataaatt cacttatttt tcacaattct tctggttatg CD 51 ccttttcttc tttactttct atattttcat atgcaatgat ggagatggag CD 101 tacttgggat cagcagaatt ctaaaactac ggaaccaact gctttcacac CD 151 cgggggaaga ccatccagag caaggacccc aacagtttgg aagatctctt CD 201 gagaaaaggt tttagcactg gtgtatccta tatgtatgct agtttattcg CD 251 aagtatccca atggtgtaag gccgtcgact tattgggaaa aaggaggaaa CD 301 atTactttga tctcttgttt cggagaaata agtggctcac gaggaatgga CD 351 aagaaacata ttatataata tatcgaagtc ctctccttTa aatactggaa CD 401 ggtggatTac ttgtaggaat tgtaggaatg acataatgct aatccatgtt CD 451 gtacatggcc aaggaagcat aaaatga SQ SEQUENCE 159 AA; MPQLDKFTYF SQFFWLCLFF FTFYIFICND GDGVLGISRI LKLRNQLLSH RGKTIQSKDP NSLEDLLRKG FSTGVSYMYA SLFEVSQWCK AVDLLGKRRK ITLISCFGEI SGSRGMERNI LYNISKSSPL NTGRWITCRN CRNDIMLIHV VHGQGSIK* // ID AP006444_18 STANDARD; PRT; 191 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : nad9 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98862.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 27364 - 27936 FT DIRECTIONS : negative FT EDITING : 5 S(tCc) -> F(tTc) FT EDITING : 31 S(tCt) -> F(tTt) FT EDITING : 56 S(tCg) -> L(tTg) FT EDITING : 64 H(Cat) -> Y(Tat) FT EDITING : 100 P(Ccg) -> S(Tcg) FT EDITING : 110 R(Cgg) -> W(Tgg) FT EDITING : 133 S(tCa) -> L(tTa) FT EDITING : 147 L(Ctt) -> F(Ttt) FT CODON_START : 1 CL CDNALEN 573 NT; CD 1 atggataacc aatCcatttt caaatatagt tgggagactt tacccaagaa CD 51 atgggtcaaa aaaatggaaa gatcggaaca tgggaataga tCtgatacca CD 101 atacggacta cctatttcaa ttgttgtgct ttctcaaatt gcatacctat CD 151 acaagggttc aagtttCgat cgatatttgc ggagttgatC atccctcccg CD 201 aaaacgaaga tttgaagtgg tctataattt actgagtact cggtataact CD 251 cacgcattcg tgtacaaacc agtgcagacg aagtaacacg aatatctCcg CD 301 gtagtaagtc tatttccatc agccggcCgg tgggagcgag aagtttggga CD 351 tatgtttggt gtttctttca tcaatcatcc ggatctacgc cgtatatCaa CD 401 cagattatgg tttcgagggt catccattac gaaaagacCt tcctctgagt CD 451 ggatatgtgg aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 acccattgag atgacccaag aatttcgcta tttcgatttt gctagtcctt CD 551 gggaacagcg tagcgacgga taa FT EDITED CDNA CD 1 atggataacc aatTcatttt caaatatagt tgggagactt tacccaagaa CD 51 atgggtcaaa aaaatggaaa gatcggaaca tgggaataga tTtgatacca CD 101 atacggacta cctatttcaa ttgttgtgct ttctcaaatt gcatacctat CD 151 acaagggttc aagtttTgat cgatatttgc ggagttgatT atccctcccg CD 201 aaaacgaaga tttgaagtgg tctataattt actgagtact cggtataact CD 251 cacgcattcg tgtacaaacc agtgcagacg aagtaacacg aatatctTcg CD 301 gtagtaagtc tatttccatc agccggcTgg tgggagcgag aagtttggga CD 351 tatgtttggt gtttctttca tcaatcatcc ggatctacgc cgtatatTaa CD 401 cagattatgg tttcgagggt catccattac gaaaagacTt tcctctgagt CD 451 ggatatgtgg aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 acccattgag atgacccaag aatttcgcta tttcgatttt gctagtcctt CD 551 gggaacagcg tagcgacgga taa SQ SEQUENCE 191 AA; MDNQFIFKYS WETLPKKWVK KMERSEHGNR FDTNTDYLFQ LLCFLKLHTY TRVQVLIDIC GVDYPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISS VVSLFPSAGW WEREVWDMFG VSFINHPDLR RILTDYGFEG HPLRKDFPLS GYVEVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG * // ID AP006444_19 STANDARD; PRT; 212 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT N-terminal not determined FT GENE : ccmFN2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98863.1 FT PROTEIN_NAME : cytochrome c biogenesis ccmF FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 31701 - 32336 FT DIRECTIONS : positive FT EDITING : 30 S(tCg) -> L(tTg) FT EDITING : 39 N(aaC) -> N(aaT) FT EDITING : 67 P(cCa) -> L(cTa) FT EDITING : 78 R(Cgg) -> W(Tgg) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 95 R(Cgg) -> W(Tgg) FT EDITING : 101 R(Cgt) -> C(Tgt) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 123 P(cCa) -> L(cTa) FT EDITING : 139 P(Ccc) -> S(Tcc) FT CODON_START : 1 CL CDNALEN 636 NT; CD 1 tctttgctct gggcaggagc gctagtggac acggggaggg agcaggcgaa CD 51 gcgtgtcgtt cgtaatggaa agaaagagac cactacttCg cctctttgtt CD 101 ggaccgccgg cgcgaaCaca gtggtctctg atcaggacca ggaaccaatt CD 151 cgaatttgga tcttgacatg ttggtggttt ttaaccgtag gcatcttgcC CD 201 aggaagttgg tgggcttatc atgaattagg tCggggtggc tggtggtttC CD 251 gggatcccgt agaaaatgct tcttttatgc ctCgggtatt agccacagct CD 301 Cgtattcatt ctgtaatttt accccttctt cattcttgga cctCgtttct CD 351 taatattgtg acttttcCat gctgtgtctt aggaaccttt tcaatacggt CD 401 ccggattgct agctCccgtt catagttttg ctacagatga tacacgagga CD 451 atctttttat ggtggttctt ccttctaatg accggcatat ctatgattct CD 501 tttctaccag atgaagcagc aggcatcggt ccgtagaacg tataaaaaag CD 551 aaatggttgt ggcgcgaagt actcttgtgc atctacgtca ctcggctcgc CD 601 gcgcaacccc gccccgttat gttatggaag aattga FT EDITED CDNA CD 1 tctttgctct gggcaggagc gctagtggac acggggaggg agcaggcgaa CD 51 gcgtgtcgtt cgtaatggaa agaaagagac cactacttTg cctctttgtt CD 101 ggaccgccgg cgcgaaTaca gtggtctctg atcaggacca ggaaccaatt CD 151 cgaatttgga tcttgacatg ttggtggttt ttaaccgtag gcatcttgcT CD 201 aggaagttgg tgggcttatc atgaattagg tTggggtggc tggtggtttT CD 251 gggatcccgt agaaaatgct tcttttatgc ctTgggtatt agccacagct CD 301 Tgtattcatt ctgtaatttt accccttctt cattcttgga cctTgtttct CD 351 taatattgtg acttttcTat gctgtgtctt aggaaccttt tcaatacggt CD 401 ccggattgct agctTccgtt catagttttg ctacagatga tacacgagga CD 451 atctttttat ggtggttctt ccttctaatg accggcatat ctatgattct CD 501 tttctaccag atgaagcagc aggcatcggt ccgtagaacg tataaaaaag CD 551 aaatggttgt ggcgcgaagt actcttgtgc atctacgtca ctcggctcgc CD 601 gcgcaacccc gccccgttat gttatggaag aattga SQ SEQUENCE 212 AA; SLLWAGALVD TGREQAKRVV RNGKKETTTL PLCWTAGANT VVSDQDQEPI RIWILTCWWF LTVGILLGSW WAYHELGWGG WWFWDPVENA SFMPWVLATA CIHSVILPLL HSWTLFLNIV TFLCCVLGTF SIRSGLLASV HSFATDDTRG IFLWWFFLLM TGISMILFYQ MKQQASVRRT YKKEMVVARS TLVHLRHSAR AQPRPVMLWK N* // ID AP006444_20 STANDARD; PRT; 262 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98864.1 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 36626 - 37411 FT DIRECTIONS : negative FT EDITING : 35 P(Cca) -> S(Tca) FT CODON_START : 1 CL CDNALEN 786 NT; CD 1 atgaatcaaa tagggctggt ggcgcagtcc ccacttgacc aatttgagat CD 51 tgtcccattg attcctatga atatcggaaa cttctatttc tcattcacaa CD 101 atCcatcttt gttcatgctg ctaactctga gttttttcct acttctgatt CD 151 cattttatta ctaaaaaggg aggaggaaac ttagtcccaa atgcttggca CD 201 atccttggta gagcttcttt atgatttcgt gctgaacctg gtaaaggaac CD 251 aaataggtgg tctttccgga aatgtgaaac aaatgttttt cccttgcatc CD 301 ttggtcactt ttcttttttt gttattttgt aatcttcagg gtatgatacc CD 351 ttatagcttc acagtgacaa gtcattttct cattactttg gctctctcat CD 401 tttctatttt tattggcatt actatagtgg gatttcaaag acatgggctt CD 451 cattttttca gctttttatt acccgcagga gtcccactgc cgttagcacc CD 501 ttttttagta ctccttgagc taatttctta ttgttttcgc gcattaagct CD 551 taggaatacg tttatttgct aatatgatgg ccggtcatag tttagtaaag CD 601 attttaagtg ggttcgcttg gactatgcta tgtatgaatg agattttcta CD 651 ttttataggg gctcttggtc ctttatttat agttcttgca ttaaccggtc CD 701 tggaattagg tgtagctata ttacaagctt atgtttttac gatcttaatc CD 751 tgtatttact tgaatgatgc tataaatctc cattaa FT EDITED CDNA CD 1 atgaatcaaa tagggctggt ggcgcagtcc ccacttgacc aatttgagat CD 51 tgtcccattg attcctatga atatcggaaa cttctatttc tcattcacaa CD 101 atTcatcttt gttcatgctg ctaactctga gttttttcct acttctgatt CD 151 cattttatta ctaaaaaggg aggaggaaac ttagtcccaa atgcttggca CD 201 atccttggta gagcttcttt atgatttcgt gctgaacctg gtaaaggaac CD 251 aaataggtgg tctttccgga aatgtgaaac aaatgttttt cccttgcatc CD 301 ttggtcactt ttcttttttt gttattttgt aatcttcagg gtatgatacc CD 351 ttatagcttc acagtgacaa gtcattttct cattactttg gctctctcat CD 401 tttctatttt tattggcatt actatagtgg gatttcaaag acatgggctt CD 451 cattttttca gctttttatt acccgcagga gtcccactgc cgttagcacc CD 501 ttttttagta ctccttgagc taatttctta ttgttttcgc gcattaagct CD 551 taggaatacg tttatttgct aatatgatgg ccggtcatag tttagtaaag CD 601 attttaagtg ggttcgcttg gactatgcta tgtatgaatg agattttcta CD 651 ttttataggg gctcttggtc ctttatttat agttcttgca ttaaccggtc CD 701 tggaattagg tgtagctata ttacaagctt atgtttttac gatcttaatc CD 751 tgtatttact tgaatgatgc tataaatctc cattaa SQ SEQUENCE 262 AA; MNQIGLVAQS PLDQFEIVPL IPMNIGNFYF SFTNSSLFML LTLSFFLLLI HFITKKGGGN LVPNAWQSLV ELLYDFVLNL VKEQIGGLSG NVKQMFFPCI LVTFLFLLFC NLQGMIPYSF TVTSHFLITL ALSFSIFIGI TIVGFQRHGL HFFSFLLPAG VPLPLAPFLV LLELISYCFR ALSLGIRLFA NMMAGHSLVK ILSGFAWTML CMNEIFYFIG ALGPLFIVLA LTGLELGVAI LQAYVFTILI CIYLNDAINL H* // ID AP006444_21 STANDARD; PRT; 193 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : orf25 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98865.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 41309 - 41887 FT DIRECTIONS : negative FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 46 I(atC) -> I(atT) FT EDITING : 72 S(tCg) -> L(tTg) FT EDITING : 83 P(cCt) -> L(cTt) FT EDITING : 84 P(CCg) -> L(TTg) FT EDITING : 132 S(tCa) -> L(tTa) FT EDITING : 139 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 579 NT; CD 1 atgagattga gttcgacgaa tatggatgct agaaagatgt tatttgctgc CD 51 tattctatct atttgtgcat taagttcgaa gaagatctCa atctataatg CD 101 aagaaatgat agtagctctt tgttttatag gctttatCat attcagtcgt CD 151 aagagtttag gtacgacttt caaagcgact ctcgacggga gaatccaggc CD 201 tattcaggaa gaatCgcagc aattccccaa tcctaacgaa gtagttcCtC CD 251 Cggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgt CD 301 ggcaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgtt aagtCagcaa CD 401 cacttacaaa tgccaCttct tcccgtcgca tccgttttca ggacgatcta CD 451 gtcacaaagt tttacacctt agtgggtaat caatttgcct actcttctat CD 501 ctcgaaagca gaaagagtag aattcattcg agagagcttg gtggtcttaa CD 551 gaatggttcg gggggggggt ttctcttaa FT EDITED CDNA CD 1 atgagattga gttcgacgaa tatggatgct agaaagatgt tatttgctgc CD 51 tattctatct atttgtgcat taagttcgaa gaagatctTa atctataatg CD 101 aagaaatgat agtagctctt tgttttatag gctttatTat attcagtcgt CD 151 aagagtttag gtacgacttt caaagcgact ctcgacggga gaatccaggc CD 201 tattcaggaa gaatTgcagc aattccccaa tcctaacgaa gtagttcTtT CD 251 Tggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgt CD 301 ggcaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgtt aagtTagcaa CD 401 cacttacaaa tgccaTttct tcccgtcgca tccgttttca ggacgatcta CD 451 gtcacaaagt tttacacctt agtgggtaat caatttgcct actcttctat CD 501 ctcgaaagca gaaagagtag aattcattcg agagagcttg gtggtcttaa CD 551 gaatggttcg gggggggggt ttctcttaa SQ SEQUENCE 193 AA; MRLSSTNMDA RKMLFAAILS ICALSSKKIL IYNEEMIVAL CFIGFIIFSR KSLGTTFKAT LDGRIQAIQE ELQQFPNPNE VVLLESNEQQ RLLRISLRIC GTVVESLPMA RCAPKCEKTV QALLCRNLNV KLATLTNAIS SRRIRFQDDL VTKFYTLVGN QFAYSSISKA ERVEFIRESL VVLRMVRGGG FS* // ID AP006444_22 STANDARD; PRT; 101 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : nad4L FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98866.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 42122 - 42424 FT DIRECTIONS : negative FT EDITING : 3 P(cCt) -> L(cTt) FT EDITING : 14 S(tCt) -> F(tTt) FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 29 P(cCt) -> L(cTt) FT EDITING : 32 S(tCa) -> L(tTa) FT EDITING : 34 P(Cca) -> S(Tca) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 44 S(tCg) -> L(tTg) FT EDITING : 53 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atggatcCta tcaaatattt cacattttct atgattattt Ctattttagg CD 51 tattCgggga atcctcctta atagacgaaa tattcCtatt atgtCaatgC CD 101 caattgaatC aatgttatta gctgtgaatt Cgaacttttt ggtattttcc CD 151 gtttcttCgg atgatatgat gggtcaagta tttgcttcat tggttccaac CD 201 ggtggcagct gcggaatccg ctattgggtt agccattttc gttataactt CD 251 tccgagtccg agggactatt gctgtagaat ttattaatag cattcaaggt CD 301 taa FT EDITED CDNA CD 1 atggatcTta tcaaatattt cacattttct atgattattt Ttattttagg CD 51 tattTgggga atcctcctta atagacgaaa tattcTtatt atgtTaatgT CD 101 caattgaatT aatgttatta gctgtgaatt Tgaacttttt ggtattttcc CD 151 gtttcttTgg atgatatgat gggtcaagta tttgcttcat tggttccaac CD 201 ggtggcagct gcggaatccg ctattgggtt agccattttc gttataactt CD 251 tccgagtccg agggactatt gctgtagaat ttattaatag cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDLIKYFTFS MIIFILGIWG ILLNRRNILI MLMSIELMLL AVNLNFLVFS VSLDDMMGQV FASLVPTVAA AESAIGLAIF VITFRVRGTI AVEFINSIQG * // ID AP006444_26 STANDARD; PRT; 149 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : rps7 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98870.1 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 49925 - 50371 FT DIRECTIONS : negative FT EDITING : 111 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 447 NT; CD 1 atggggggct tggatggtga gcaaaaacta ttgatcaaga agttggtcaa CD 51 ttttcgcatg aaagaaggta aaagaacgag agttcgtgct attgtttatc CD 101 aaacttttca tcgcccagct cgaactgaac gcgatgtaat caaacttatg CD 151 gttgacgccg tagagaatat aaagcccata tgcgaagtag caaaagtagg CD 201 agtagcgggt actatttatg atgtccctgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggatccttg aagcagcttt caaacgacgt CD 301 ataagctaca ggataagctt agagaaatgt tCatttgctg agatactgga CD 351 tgcttaccaa aagaggggaa gtgcacgtag gaaaagggag aatcttcatg CD 401 gactggcttc caccaatcga agtttcgcgc atttcagatg gtggtaa FT EDITED CDNA CD 1 atggggggct tggatggtga gcaaaaacta ttgatcaaga agttggtcaa CD 51 ttttcgcatg aaagaaggta aaagaacgag agttcgtgct attgtttatc CD 101 aaacttttca tcgcccagct cgaactgaac gcgatgtaat caaacttatg CD 151 gttgacgccg tagagaatat aaagcccata tgcgaagtag caaaagtagg CD 201 agtagcgggt actatttatg atgtccctgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggatccttg aagcagcttt caaacgacgt CD 301 ataagctaca ggataagctt agagaaatgt tTatttgctg agatactgga CD 351 tgcttaccaa aagaggggaa gtgcacgtag gaaaagggag aatcttcatg CD 401 gactggcttc caccaatcga agtttcgcgc atttcagatg gtggtaa SQ SEQUENCE 149 AA; MGGLDGEQKL LIKKLVNFRM KEGKRTRVRA IVYQTFHRPA RTERDVIKLM VDAVENIKPI CEVAKVGVAG TIYDVPGIVA RDRQQTLAIR WILEAAFKRR ISYRISLEKC LFAEILDAYQ KRGSARRKRE NLHGLASTNR SFAHFRWW* // ID AP006444_31 STANDARD; PRT; 678 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT N-terminal not determined FT GENE : matR FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98875.1 FT PROTEIN_NAME : maturase-related protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 59777 - 61810 FT DIRECTIONS : positive FT EDITING : 129 P(cCa) -> L(cTa) FT EDITING : 158 S(tCg) -> L(tTg) FT EDITING : 582 S(tCc) -> F(tTc) FT EDITING : 589 P(cCt) -> L(cTt) FT EDITING : 596 R(Cgc) -> C(Tgc) FT EDITING : 608 H(Cac) -> Y(Tac) FT EDITING : 631 P(cCc) -> L(cTc) FT EDITING : 637 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 2034 NT; CD 1 agaaagaaag aagggttgaa gtttagaccg ctcacagtag ttctacctat CD 51 agaaaagatc atgaaagagg cgatcagaat ggtactcgaa tccatttacg CD 101 atcccgagtt tccagacaca tcgcatttcc gctcgggtca aggctgccac CD 151 tcggtcctaa gacggatcaa agaagagtgg ggaatctctc gctggttttt CD 201 agaattcgac atcaggaagt gttttcacac catcgatcga catcgactca CD 251 tccaaatttt gaaggaagag atcgacgatc ccaagttctt ttactccatt CD 301 cataaagtct tttccgccgg acgactcgta ggagttgaga ggggccctta CD 351 ctccgtccca cacagtgtac tactatcggc cctacCaggc aacatctacc CD 401 tacacaagct cgatcaggag atagggagga tccgacagaa gtatgaaatt CD 451 ccgattgttc agagagtcag atCggttcta ttaaggacag gtcgtcgtat CD 501 tgatgaccaa gaaaaccctg gagaagaagc aagcttcaac gctccccaag CD 551 acaacagagc catcattgtg gggagcgtta agagcatgca acgcaaagcg CD 601 gcctttcatt cccttgtttc gtcgtggcac acccccccca caagcaccct CD 651 ccggctcagg ggggaccaga aaaggccttt cgttttcccc ccttcgtcgg CD 701 cccttgccgt cttccttaac aagccctcga gccttctttg cgccgccttc CD 751 ctcatagaag ccgccgggtt gaccccgaag gccgaattct atggtggaga CD 801 acgctgtaat aataattggg ccatgagaga ccttcttaag tattgcaaaa CD 851 gaaagggcct gctgatagag ctgggcgggg aggcgatact agttatcagg CD 901 tcagagagag gcctggcccg taagcaggcc cccttaaaaa cccattactt CD 951 aataaggatt tgttacgcgc gatatgccga cgacttacta ctgggaatcg CD 1001 tgggtgccgt agagcttctc atagaaatac aaaaacgtat cgcccatttc CD 1051 ctacaatccg gcctgaacct ttgggtaggc tccgcaggat caacaacaat CD 1101 agctgcacgg agtacggtag aattcctcgg tacggtcatt cgggaagtcc CD 1151 ctccgaggac gactcccata caatttttgc gagagctgga aaagcgtcta CD 1201 cgggtaaagc accgtatcca tataactgct tgccacctac gctccgccat CD 1251 ccattcaaag tttaggaatc taggtgatag tatcccgatc aaacagctga CD 1301 cgaaggggat gagcaaaaca gggagtctac aggacggggt tcaactagcg CD 1351 gagactcttg gaacagctgg agtcagaagt ccccaagtta gcgtattatg CD 1401 ggggaccgtc aagcacatcc ggcaaggcgt tcctcggggg atctcgttct CD 1451 tgcatagctc aggtcggagc aacgcgtcat cggacgttca acaggtagtc CD 1501 tcacgatcgg gcactcatgc ccgtaagttg tcattgtata ctcccccggg CD 1551 tcggaaggcg gcgggggagg gaggaggaca ctgggcggga tctatcagca CD 1601 gcgaattccc cgtaaagata gaggcaccta taaaaaagat actccgaagg CD 1651 cttcgggatc gaggtatcat tagccgaaga agaccctggc caatccacgt CD 1701 ggcctgcttg acgaacgtca gcgacgaaga catcgtaaat tggtCcgcgg CD 1751 gcatcgcgat aagtcCtctg tcctactaca ggtgcCgcga caacctttac CD 1801 caagtccgaa cgattgtcga cCaccagatt cgctggtctg caatattcac CD 1851 cctagcccac aagcacaaat cctcggcgcg gaatataatc cCcaagtact CD 1901 ccaaagactC aaatattgta aatcaagaag gtggtaagat ccttgcagag CD 1951 ttccccaaca gcatagagct tgggaagctc ggacccggtc aagacctgaa CD 2001 caagaaggaa cactcaacta ctagtctagt ctag FT EDITED CDNA CD 1 agaaagaaag aagggttgaa gtttagaccg ctcacagtag ttctacctat CD 51 agaaaagatc atgaaagagg cgatcagaat ggtactcgaa tccatttacg CD 101 atcccgagtt tccagacaca tcgcatttcc gctcgggtca aggctgccac CD 151 tcggtcctaa gacggatcaa agaagagtgg ggaatctctc gctggttttt CD 201 agaattcgac atcaggaagt gttttcacac catcgatcga catcgactca CD 251 tccaaatttt gaaggaagag atcgacgatc ccaagttctt ttactccatt CD 301 cataaagtct tttccgccgg acgactcgta ggagttgaga ggggccctta CD 351 ctccgtccca cacagtgtac tactatcggc cctacTaggc aacatctacc CD 401 tacacaagct cgatcaggag atagggagga tccgacagaa gtatgaaatt CD 451 ccgattgttc agagagtcag atTggttcta ttaaggacag gtcgtcgtat CD 501 tgatgaccaa gaaaaccctg gagaagaagc aagcttcaac gctccccaag CD 551 acaacagagc catcattgtg gggagcgtta agagcatgca acgcaaagcg CD 601 gcctttcatt cccttgtttc gtcgtggcac acccccccca caagcaccct CD 651 ccggctcagg ggggaccaga aaaggccttt cgttttcccc ccttcgtcgg CD 701 cccttgccgt cttccttaac aagccctcga gccttctttg cgccgccttc CD 751 ctcatagaag ccgccgggtt gaccccgaag gccgaattct atggtggaga CD 801 acgctgtaat aataattggg ccatgagaga ccttcttaag tattgcaaaa CD 851 gaaagggcct gctgatagag ctgggcgggg aggcgatact agttatcagg CD 901 tcagagagag gcctggcccg taagcaggcc cccttaaaaa cccattactt CD 951 aataaggatt tgttacgcgc gatatgccga cgacttacta ctgggaatcg CD 1001 tgggtgccgt agagcttctc atagaaatac aaaaacgtat cgcccatttc CD 1051 ctacaatccg gcctgaacct ttgggtaggc tccgcaggat caacaacaat CD 1101 agctgcacgg agtacggtag aattcctcgg tacggtcatt cgggaagtcc CD 1151 ctccgaggac gactcccata caatttttgc gagagctgga aaagcgtcta CD 1201 cgggtaaagc accgtatcca tataactgct tgccacctac gctccgccat CD 1251 ccattcaaag tttaggaatc taggtgatag tatcccgatc aaacagctga CD 1301 cgaaggggat gagcaaaaca gggagtctac aggacggggt tcaactagcg CD 1351 gagactcttg gaacagctgg agtcagaagt ccccaagtta gcgtattatg CD 1401 ggggaccgtc aagcacatcc ggcaaggcgt tcctcggggg atctcgttct CD 1451 tgcatagctc aggtcggagc aacgcgtcat cggacgttca acaggtagtc CD 1501 tcacgatcgg gcactcatgc ccgtaagttg tcattgtata ctcccccggg CD 1551 tcggaaggcg gcgggggagg gaggaggaca ctgggcggga tctatcagca CD 1601 gcgaattccc cgtaaagata gaggcaccta taaaaaagat actccgaagg CD 1651 cttcgggatc gaggtatcat tagccgaaga agaccctggc caatccacgt CD 1701 ggcctgcttg acgaacgtca gcgacgaaga catcgtaaat tggtTcgcgg CD 1751 gcatcgcgat aagtcTtctg tcctactaca ggtgcTgcga caacctttac CD 1801 caagtccgaa cgattgtcga cTaccagatt cgctggtctg caatattcac CD 1851 cctagcccac aagcacaaat cctcggcgcg gaatataatc cTcaagtact CD 1901 ccaaagactT aaatattgta aatcaagaag gtggtaagat ccttgcagag CD 1951 ttccccaaca gcatagagct tgggaagctc ggacccggtc aagacctgaa CD 2001 caagaaggaa cactcaacta ctagtctagt ctag SQ SEQUENCE 678 AA; RKKEGLKFRP LTVVLPIEKI MKEAIRMVLE SIYDPEFPDT SHFRSGQGCH SVLRRIKEEW GISRWFLEFD IRKCFHTIDR HRLIQILKEE IDDPKFFYSI HKVFSAGRLV GVERGPYSVP HSVLLSALLG NIYLHKLDQE IGRIRQKYEI PIVQRVRLVL LRTGRRIDDQ ENPGEEASFN APQDNRAIIV GSVKSMQRKA AFHSLVSSWH TPPTSTLRLR GDQKRPFVFP PSSALAVFLN KPSSLLCAAF LIEAAGLTPK AEFYGGERCN NNWAMRDLLK YCKRKGLLIE LGGEAILVIR SERGLARKQA PLKTHYLIRI CYARYADDLL LGIVGAVELL IEIQKRIAHF LQSGLNLWVG SAGSTTIAAR STVEFLGTVI REVPPRTTPI QFLRELEKRL RVKHRIHITA CHLRSAIHSK FRNLGDSIPI KQLTKGMSKT GSLQDGVQLA ETLGTAGVRS PQVSVLWGTV KHIRQGVPRG ISFLHSSGRS NASSDVQQVV SRSGTHARKL SLYTPPGRKA AGEGGGHWAG SISSEFPVKI EAPIKKILRR LRDRGIISRR RPWPIHVACL TNVSDEDIVN WFAGIAISLL SYYRCCDNLY QVRTIVDYQI RWSAIFTLAH KHKSSARNII LKYSKDLNIV NQEGGKILAE FPNSIELGKL GPGQDLNKKE HSTTSLV* // ID AP006444_38 STANDARD; PRT; 443 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : ccmFC FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98883.1 FT PROTEIN_NAME : cytochrome c biogenesis ccmF FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 261/0 FT EDITING : 17 P(cCt) -> L(cTt) FT EDITING : 35 P(Ccc) -> S(Tcc) FT EDITING : 49 P(cCt) -> L(cTt) FT EDITING : 52 S(tCa) -> L(tTa) FT EDITING : 54 P(Cct) -> S(Tct) FT EDITING : 112 R(Cgt) -> C(Tgt) FT EDITING : 136 R(Cgt) -> C(Tgt) FT EDITING : 139 L(Ctc) -> F(Ttc) FT EDITING : 297 S(tCt) -> F(tTt) FT EDITING : 391 S(tCg) -> L(tTg) FT EDITING : 416 R(Cgg) -> W(Tgg) FT EDITING : 443 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1329 NT; CD 1 atggtccaac tacataactt tttctttttt attcttttta tggtcgtgcC CD 51 ttgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttCccacggg tgcccctttt tccaatggta ctataattcc tattcCtatc CD 151 tcttCattcC ctcttttggt ctatctacat tccaggaaaa tcatacgctc CD 201 catggacgga gcaaaaagtg gagtcttggt cagagcaagt cgccctattc CD 251 tattaccaga cataattggg agaagctcat ccgaaactag agctagaaag CD 301 gccttatttt ttttcgttcc cgttcttcat ttcCgtcttc tcgaatccaa CD 351 gggggacttc tcatatttag aatctttctg cggtgtgctc tgtttactat CD 401 tctttCgtac tttcCtcttt ttagcacgcg ataggtcagc gaagcgtgag CD 451 cgggcgcgga gaaggaaagg ccaaacactt cggccgaacg ggaatgagca CD 501 acgacgaaat gacaagatga ggtgctccgg gcacccccat ttagatttag CD 551 aaagaagggt cgaaggtttt gggcctctag ctttccccgt cccccctgag CD 601 ttgggtggtg cttgtgtggg gggcgtgcca ccagaaatcg ggcttgaagc CD 651 tctcgcctta ccaaggagcc gacagctgat ggctatggct gttggtcacg CD 701 actactacca aaaggttcca atgaagatga atatttcaca tggaggagtg CD 751 tgcatctgta tgttgggtgt tcttctgtcg aacacaaaga agatacagtt CD 801 cactcaacga ttgcctttgg gttccgaact ccatatgggg aaggagcgtt CD 851 gttgtttgcg aggtctcgat catttacatg gacccacttC tcattccatt CD 901 tgtgggaatt tgatgatcta taaaccgtcc ctaacgaacg atcggctcat CD 951 gtttgagcat gatgaatcac ttcatgccga cctcttgcta ataaactttc CD 1001 cggcctcata taagaatgga aaacttgagc attttctgca ttggtggatg CD 1051 aagaatcgca aacataataa tttttggtta accatgttcc cagaaaaaag CD 1101 atactttcga gaaaggacga gcacggctga agtggctata catacaaatc CD 1151 tatttacgga tctatatgct tCgattggaa ctggaagttc cagaacagga CD 1201 ggttggtata ccaccataat gaaactgcct tttatttttt ttattCggat CD 1251 aggatttatg ttggcttcgt tgggaggctt gcctagtttg ttacgtcagc CD 1301 tccaaaagga taagttgcgt tggaatCga FT EDITED CDNA CD 1 atggtccaac tacataactt tttctttttt attcttttta tggtcgtgcT CD 51 ttgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttTccacggg tgcccctttt tccaatggta ctataattcc tattcTtatc CD 151 tcttTattcT ctcttttggt ctatctacat tccaggaaaa tcatacgctc CD 201 catggacgga gcaaaaagtg gagtcttggt cagagcaagt cgccctattc CD 251 tattaccaga cataattggg agaagctcat ccgaaactag agctagaaag CD 301 gccttatttt ttttcgttcc cgttcttcat ttcTgtcttc tcgaatccaa CD 351 gggggacttc tcatatttag aatctttctg cggtgtgctc tgtttactat CD 401 tctttTgtac tttcTtcttt ttagcacgcg ataggtcagc gaagcgtgag CD 451 cgggcgcgga gaaggaaagg ccaaacactt cggccgaacg ggaatgagca CD 501 acgacgaaat gacaagatga ggtgctccgg gcacccccat ttagatttag CD 551 aaagaagggt cgaaggtttt gggcctctag ctttccccgt cccccctgag CD 601 ttgggtggtg cttgtgtggg gggcgtgcca ccagaaatcg ggcttgaagc CD 651 tctcgcctta ccaaggagcc gacagctgat ggctatggct gttggtcacg CD 701 actactacca aaaggttcca atgaagatga atatttcaca tggaggagtg CD 751 tgcatctgta tgttgggtgt tcttctgtcg aacacaaaga agatacagtt CD 801 cactcaacga ttgcctttgg gttccgaact ccatatgggg aaggagcgtt CD 851 gttgtttgcg aggtctcgat catttacatg gacccacttT tcattccatt CD 901 tgtgggaatt tgatgatcta taaaccgtcc ctaacgaacg atcggctcat CD 951 gtttgagcat gatgaatcac ttcatgccga cctcttgcta ataaactttc CD 1001 cggcctcata taagaatgga aaacttgagc attttctgca ttggtggatg CD 1051 aagaatcgca aacataataa tttttggtta accatgttcc cagaaaaaag CD 1101 atactttcga gaaaggacga gcacggctga agtggctata catacaaatc CD 1151 tatttacgga tctatatgct tTgattggaa ctggaagttc cagaacagga CD 1201 ggttggtata ccaccataat gaaactgcct tttatttttt ttattTggat CD 1251 aggatttatg ttggcttcgt tgggaggctt gcctagtttg ttacgtcagc CD 1301 tccaaaagga taagttgcgt tggaatTga SQ SEQUENCE 443 AA; MVQLHNFFFF ILFMVVLCGT AAPVLLKWFV SRDVSTGAPF SNGTIIPILI SLFSLLVYLH SRKIIRSMDG AKSGVLVRAS RPILLPDIIG RSSSETRARK ALFFFVPVLH FCLLESKGDF SYLESFCGVL CLLFFCTFFF LARDRSAKRE RARRRKGQTL RPNGNEQRRN DKMRCSGHPH LDLERRVEGF GPLAFPVPPE LGGACVGGVP PEIGLEALAL PRSRQLMAMA VGHDYYQKVP MKMNISHGGV CICMLGVLLS NTKKIQFTQR LPLGSELHMG KERCCLRGLD HLHGPTFHSI CGNLMIYKPS LTNDRLMFEH DESLHADLLL INFPASYKNG KLEHFLHWWM KNRKHNNFWL TMFPEKRYFR ERTSTAEVAI HTNLFTDLYA LIGTGSSRTG GWYTTIMKLP FIFFIWIGFM LASLGGLPSL LRQLQKDKLR WN* // ID AP006444_40 STANDARD; PRT; 266 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : cox3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98885.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 96486 - 97283 FT DIRECTIONS : positive FT EDITING : 38 P(Cca) -> S(Tca) FT EDITING : 82 P(cCt) -> L(cTt) FT EDITING : 86 S(tCt) -> F(tTt) FT EDITING : 104 S(tCt) -> F(tTt) FT EDITING : 105 S(tCt) -> F(tTt) FT EDITING : 138 P(cCt) -> L(cTt) FT EDITING : 141 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 798 NT; CD 1 atgattgaat ctcagaggca ttcttatcat ttggtagatc caagtccatg CD 51 gcctatttcg ggttcactcg gagctttggc aaccaccgta ggaggtgtga CD 101 tgtacatgca cCcatttcaa gggggtgcaa gacttctaag tttgggcctc CD 151 atatttctcc tatataccat gttcgtatgg tggcgcgatg ttctacgtga CD 201 atccacgttg gaaggacatc ataccaaagt cgtacaatta ggacCtcgat CD 251 atggttCtat tctgttcatc gtatcggagg ttatgttctt ttttgctttt CD 301 ttttgggctt CttCtcattc ttctttggca cctgcggtag agatcggagg CD 351 tatttggccc ccaaaaggga ttggggtttt agatccttgg gaaatccctt CD 401 ttcttaatac ccCtattctc cCttcatccg gagctgccgt aacttgggct CD 451 catcatgcta tactcgcggg gaaggaaaaa cgagcagttt atgctttagt CD 501 agctaccgtt ttactggctc tagtatttac tggctttcaa ggaatggaat CD 551 attatcaagc acccttcact atttcggata gtatttatgg ttctaccttt CD 601 ttcttagcaa caggctttca tggttttcat gtgattatag gtactctttt CD 651 cttgattata tgtggtattc ggcaatatct tggtcatctg acgaaggagc CD 701 atcacgttgg ctttgaagca gctgcatggt actggcattt tgtagacgtg CD 751 gtttggttat tcctatttgt ctctatctat tggtggggag gtatatga FT EDITED CDNA CD 1 atgattgaat ctcagaggca ttcttatcat ttggtagatc caagtccatg CD 51 gcctatttcg ggttcactcg gagctttggc aaccaccgta ggaggtgtga CD 101 tgtacatgca cTcatttcaa gggggtgcaa gacttctaag tttgggcctc CD 151 atatttctcc tatataccat gttcgtatgg tggcgcgatg ttctacgtga CD 201 atccacgttg gaaggacatc ataccaaagt cgtacaatta ggacTtcgat CD 251 atggttTtat tctgttcatc gtatcggagg ttatgttctt ttttgctttt CD 301 ttttgggctt TttTtcattc ttctttggca cctgcggtag agatcggagg CD 351 tatttggccc ccaaaaggga ttggggtttt agatccttgg gaaatccctt CD 401 ttcttaatac ccTtattctc cTttcatccg gagctgccgt aacttgggct CD 451 catcatgcta tactcgcggg gaaggaaaaa cgagcagttt atgctttagt CD 501 agctaccgtt ttactggctc tagtatttac tggctttcaa ggaatggaat CD 551 attatcaagc acccttcact atttcggata gtatttatgg ttctaccttt CD 601 ttcttagcaa caggctttca tggttttcat gtgattatag gtactctttt CD 651 cttgattata tgtggtattc ggcaatatct tggtcatctg acgaaggagc CD 701 atcacgttgg ctttgaagca gctgcatggt actggcattt tgtagacgtg CD 751 gtttggttat tcctatttgt ctctatctat tggtggggag gtatatga SQ SEQUENCE 266 AA; MIESQRHSYH LVDPSPWPIS GSLGALATTV GGVMYMHSFQ GGARLLSLGL IFLLYTMFVW WRDVLRESTL EGHHTKVVQL GLRYGFILFI VSEVMFFFAF FWAFFHSSLA PAVEIGGIWP PKGIGVLDPW EIPFLNTLIL LSSGAAVTWA HHAILAGKEK RAVYALVATV LLALVFTGFQ GMEYYQAPFT ISDSIYGSTF FLATGFHGFH VIIGTLFLII CGIRQYLGHL TKEHHVGFEA AAWYWHFVDV VWLFLFVSIY WWGGI* // ID AP006444_47 STANDARD; PRT; 382 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : ccmFN1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98892.1 FT PROTEIN_NAME : cytochrome c biogenesis ccmF FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 106649 - 107794 FT DIRECTIONS : negative FT EDITING : 13 P(cCg) -> L(cTg) FT EDITING : 33 P(cCt) -> L(cTt) FT EDITING : 46 S(tCg) -> L(tTg) FT EDITING : 51 P(Cct) -> S(Tct) FT EDITING : 86 R(Cgg) -> W(Tgg) FT EDITING : 88 P(cCa) -> L(cTa) FT EDITING : 95 L(Ctt) -> F(Ttt) FT EDITING : 124 F(ttC) -> F(ttT) FT EDITING : 236 P(CCt) -> F(TTt) FT EDITING : 259 S(tCa) -> L(tTa) FT EDITING : 263 P(cCa) -> L(cTa) FT EDITING : 268 S(tCa) -> L(tTa) FT EDITING : 318 R(Cgc) -> C(Tgc) FT EDITING : 326 R(Cgt) -> C(Tgt) FT CODON_START : 1 CL CDNALEN 1146 NT; CD 1 atgtcaatat atgaattctt tcattattcg ttatttcCgg gtcttttcgt CD 51 tgcattcact tacaacaaga aacaaccacc agcgtttggt gcagcacCtg CD 101 cattttggtg cattcttctt tctttccttg gtctttCgtt ctgtcatatt CD 151 Cctaataact tatccaatta caacgtatta accgctaatg cacctttctt CD 201 ttatcaaatc tcaggaacat ggtctaatca tgagggtagt attttattat CD 251 ggtgtCggat ccCaaatttt tatggatttt ttCtttgtta ccggggtcga CD 301 ccccaaagcc ataatgtctt aaaacaagga ggccataggg aaagtctttt CD 351 tttttttttt ttctcgaact tCgtgaagaa ctcaatttta tctctccctc CD 401 gttacgaaca agaaagtggt ttgaaaaatc agttgtacac tcccttcgtt CD 451 ctacgaaccc ttgttgattc tgaacttcgt ttgcgaagga accggacttt CD 501 tgacggacca gccctttttt atgcgccgct tgatcctgaa aggaaaatga CD 551 gctttgctcc tctggacgct tggcgctccc gtggttcgcg agaaggaaaa CD 601 aggactcatc ctttgttgca tctggcacga gatgataaag agagagcttc CD 651 gtctatcgat gaacagcgaa ttgacggagc tcttggcatt gctttgtttt CD 701 tctctCCttt cctatcagcg agttccgatc cttttgttcg aaatttcttt CD 751 gtttgtaccg aaccgcttgc agaatCaaat cctgttcCac aagatcctat CD 801 atCagctata catcctcctt gcatttatgc cggggacgtc gccagtgcgg CD 851 agggctttgg cttatgtaga tcaaaaatga tgaatgggat tgtggcactc CD 901 cactcgccgc caatgcggaa ggatgccgcc gaaaagaatg gaacgctgct CD 951 tCgctctgct ggatgcgtcg gatccCgtat aacaagcgag ctttttaccc CD 1001 tcaaattcaa acatgtgggc gcaaaatgct atcctgctct attgttacgt CD 1051 agcaatagaa gcccgctcat gctgcttcgg cggcgctttt tcgccttctc CD 1101 ttcgttctgg acaggagcga gaagccactc gactaaaagg tactga FT EDITED CDNA CD 1 atgtcaatat atgaattctt tcattattcg ttatttcTgg gtcttttcgt CD 51 tgcattcact tacaacaaga aacaaccacc agcgtttggt gcagcacTtg CD 101 cattttggtg cattcttctt tctttccttg gtctttTgtt ctgtcatatt CD 151 Tctaataact tatccaatta caacgtatta accgctaatg cacctttctt CD 201 ttatcaaatc tcaggaacat ggtctaatca tgagggtagt attttattat CD 251 ggtgtTggat ccTaaatttt tatggatttt ttTtttgtta ccggggtcga CD 301 ccccaaagcc ataatgtctt aaaacaagga ggccataggg aaagtctttt CD 351 tttttttttt ttctcgaact tTgtgaagaa ctcaatttta tctctccctc CD 401 gttacgaaca agaaagtggt ttgaaaaatc agttgtacac tcccttcgtt CD 451 ctacgaaccc ttgttgattc tgaacttcgt ttgcgaagga accggacttt CD 501 tgacggacca gccctttttt atgcgccgct tgatcctgaa aggaaaatga CD 551 gctttgctcc tctggacgct tggcgctccc gtggttcgcg agaaggaaaa CD 601 aggactcatc ctttgttgca tctggcacga gatgataaag agagagcttc CD 651 gtctatcgat gaacagcgaa ttgacggagc tcttggcatt gctttgtttt CD 701 tctctTTttt cctatcagcg agttccgatc cttttgttcg aaatttcttt CD 751 gtttgtaccg aaccgcttgc agaatTaaat cctgttcTac aagatcctat CD 801 atTagctata catcctcctt gcatttatgc cggggacgtc gccagtgcgg CD 851 agggctttgg cttatgtaga tcaaaaatga tgaatgggat tgtggcactc CD 901 cactcgccgc caatgcggaa ggatgccgcc gaaaagaatg gaacgctgct CD 951 tTgctctgct ggatgcgtcg gatccTgtat aacaagcgag ctttttaccc CD 1001 tcaaattcaa acatgtgggc gcaaaatgct atcctgctct attgttacgt CD 1051 agcaatagaa gcccgctcat gctgcttcgg cggcgctttt tcgccttctc CD 1101 ttcgttctgg acaggagcga gaagccactc gactaaaagg tactga SQ SEQUENCE 382 AA; MSIYEFFHYS LFLGLFVAFT YNKKQPPAFG AALAFWCILL SFLGLLFCHI SNNLSNYNVL TANAPFFYQI SGTWSNHEGS ILLWCWILNF YGFFFCYRGR PQSHNVLKQG GHRESLFFFF FSNFVKNSIL SLPRYEQESG LKNQLYTPFV LRTLVDSELR LRRNRTFDGP ALFYAPLDPE RKMSFAPLDA WRSRGSREGK RTHPLLHLAR DDKERASSID EQRIDGALGI ALFFSFFLSA SSDPFVRNFF VCTEPLAELN PVLQDPILAI HPPCIYAGDV ASAEGFGLCR SKMMNGIVAL HSPPMRKDAA EKNGTLLCSA GCVGSCITSE LFTLKFKHVG AKCYPALLLR SNRSPLMLLR RRFFAFSSFW TGARSHSTKR Y* // ID AP006444_48 STANDARD; PRT; 75 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : atp9 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98893.1 FT PROTEIN_NAME : ATPase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 112435 - 112659 FT DIRECTIONS : positive FT EDITING : 7 S(tCa) -> L(tTa) FT EDITING : 17 S(tCa) -> L(tTa) FT EDITING : 45 S(tCa) -> L(tTa) FT EDITING : 64 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gtgcaaaatC aataggtgcc ggagctgcta caattgcttC CD 51 agcgggagct gctatcggta ttggaaacgt cttcagttct ttgatccatt CD 101 ctgtggcgcg aaatccatca ttggctaaac aatCatttgg ttatgccatt CD 151 ttgggctttg ctctaaccga agctattgca ttgtttgccc Caatgatggc CD 201 ctttttgatc ttattcgtat tctga FT EDITED CDNA CD 1 atgttagaag gtgcaaaatT aataggtgcc ggagctgcta caattgcttT CD 51 agcgggagct gctatcggta ttggaaacgt cttcagttct ttgatccatt CD 101 ctgtggcgcg aaatccatca ttggctaaac aatTatttgg ttatgccatt CD 151 ttgggctttg ctctaaccga agctattgca ttgtttgccc Taatgatggc CD 201 ctttttgatc ttattcgtat tctga SQ SEQUENCE 75 AA; MLEGAKLIGA GAATIALAGA AIGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI LFVF* // ID AP006444_50 STANDARD; PRT; 119 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : nad3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98895.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 114042 - 114398 FT DIRECTIONS : positive FT EDITING : 2 S(tCa) -> L(tTa) FT EDITING : 8 S(tCt) -> F(tTt) FT EDITING : 27 P(cCa) -> L(cTa) FT EDITING : 49 S(tCc) -> F(tTc) FT EDITING : 70 P(CCt) -> F(TTt) FT EDITING : 83 P(Cct) -> S(Tct) FT EDITING : 84 P(cCc) -> L(cTc) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 117 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 atgtCagaat ttgcaccaat ttCtatctat ttagtgatta gtctgctagt CD 51 ttctttgatc ctactcggtg ttccttttcC atttgcttcc aatagttcta CD 101 cctacccaga aaaattgtcg gcctacgaat gtggtttcga tccttCcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatcttgttt caattttatt CD 201 tttaatcCCt gatctggaag tcaccttttt ctttccttgg gcagtaCctc CD 251 Ccaacaagat tgatttgttt ggattttggt ccatgatggc ctttttattt CD 301 attttgacga ttggatttct ctatgaatgg aaaaggggtg cttCggatCg CD 351 ggagtaa FT EDITED CDNA CD 1 atgtTagaat ttgcaccaat ttTtatctat ttagtgatta gtctgctagt CD 51 ttctttgatc ctactcggtg ttccttttcT atttgcttcc aatagttcta CD 101 cctacccaga aaaattgtcg gcctacgaat gtggtttcga tccttTcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatcttgttt caattttatt CD 201 tttaatcTTt gatctggaag tcaccttttt ctttccttgg gcagtaTctc CD 251 Tcaacaagat tgatttgttt ggattttggt ccatgatggc ctttttattt CD 301 attttgacga ttggatttct ctatgaatgg aaaaggggtg cttTggatTg CD 351 ggagtaa SQ SEQUENCE 119 AA; MLEFAPIFIY LVISLLVSLI LLGVPFLFAS NSSTYPEKLS AYECGFDPFG DARSRFDIRF YLVSILFLIF DLEVTFFFPW AVSLNKIDLF GFWSMMAFLF ILTIGFLYEW KRGALDWE* // ID AP006444_51 STANDARD; PRT; 126 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : rps12 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98896.1 FT PROTEIN_NAME : ribosomal protein S12 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 114446 - 114823 FT DIRECTIONS : positive FT EDITING : 35 P(cCg) -> L(cTg) FT EDITING : 49 P(cCa) -> L(cTa) FT EDITING : 66 H(Cac) -> Y(Tac) FT EDITING : 74 S(tCg) -> L(tTg) FT EDITING : 90 S(tCg) -> L(tTg) FT EDITING : 95 S(tCC) -> F(tTT) FT CODON_START : 1 CL CDNALEN 378 NT; CD 1 atgcctacgt ttaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt tggataaatg tccccagaag ctaggagcat CD 101 gccCgcgtgt ttcaacgaga acaccgaaaa aaccgaattc cgctcCacgt CD 151 aagatagcca aagtacggtt gagcaatcga catgatatat ttgctCacat CD 201 tccgggcgaa ggtcataatt Cgcaggaaca ttcgcaggtg ttaataagag CD 251 gaggtagagt gaaagattCg ccaggtgtaa aatCCcattg tattcgagga CD 301 gtaaaggatt tgatgggaat tccgggtcga agaagaggca gatcaaaata CD 351 tggtgcagaa aaacccaaat cgatatga FT EDITED CDNA CD 1 atgcctacgt ttaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt tggataaatg tccccagaag ctaggagcat CD 101 gccTgcgtgt ttcaacgaga acaccgaaaa aaccgaattc cgctcTacgt CD 151 aagatagcca aagtacggtt gagcaatcga catgatatat ttgctTacat CD 201 tccgggcgaa ggtcataatt Tgcaggaaca ttcgcaggtg ttaataagag CD 251 gaggtagagt gaaagattTg ccaggtgtaa aatTTcattg tattcgagga CD 301 gtaaaggatt tgatgggaat tccgggtcga agaagaggca gatcaaaata CD 351 tggtgcagaa aaacccaaat cgatatga SQ SEQUENCE 126 AA; MPTFNQLIRH GREEKRRTDR TRALDKCPQK LGACLRVSTR TPKKPNSALR KIAKVRLSNR HDIFAYIPGE GHNLQEHSQV LIRGGRVKDL PGVKFHCIRG VKDLMGIPGR RRGRSKYGAE KPKSI* // ID AP006444_52 STANDARD; PRT; 207 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : ccmB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98897.1 FT PROTEIN_NAME : cytochrome c biogenesis ccmB FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 115015 - 115635 FT DIRECTIONS : positive FT EDITING : 6 L(Ctt) -> F(Ttt) FT EDITING : 10 H(Cat) -> Y(Tat) FT EDITING : 15 P(Ccc) -> S(Tcc) FT EDITING : 24 P(cCa) -> L(cTa) FT EDITING : 27 S(tCg) -> L(tTg) FT EDITING : 29 I(atC) -> I(atT) FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 46 S(tCc) -> F(tTc) FT EDITING : 50 P(CCg) -> L(TTg) FT EDITING : 52 R(Cgg) -> W(Tgg) FT EDITING : 53 I(atC) -> I(atT) FT EDITING : 54 P(Cct) -> S(Tct) FT EDITING : 55 P(cCg) -> L(cTg) FT EDITING : 58 P(Cct) -> S(Tct) FT EDITING : 60 P(cCt) -> L(cTt) FT EDITING : 61 P(Ccc) -> S(Tcc) FT EDITING : 65 P(CCt) -> F(TTt) FT EDITING : 96 R(Cgg) -> W(Tgg) FT EDITING : 102 R(Cgt) -> C(Tgt) FT EDITING : 113 S(tCg) -> L(tTg) FT EDITING : 123 R(Cgg) -> W(Tgg) FT EDITING : 127 P(CCa) -> L(TTa) FT EDITING : 142 R(Cgt) -> C(Tgt) FT EDITING : 143 S(tCg) -> L(tTg) FT EDITING : 156 S(tCg) -> L(tTg) FT EDITING : 159 P(CCa) -> L(TTa) FT EDITING : 162 S(tCa) -> L(tTa) FT EDITING : 171 S(tCt) -> F(tTt) FT EDITING : 172 R(Cgt) -> C(Tgt) FT EDITING : 184 S(tCa) -> L(tTa) FT EDITING : 185 S(tCg) -> L(tTg) FT EDITING : 189 S(tCc) -> F(tTc) FT EDITING : 190 S(tCt) -> F(tTt) FT EDITING : 192 F(ttC) -> F(ttT) FT EDITING : 199 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 621 NT; CD 1 atgagacgac tttttCttga actatatCat aaactgatct tcCcctccac CD 51 accaatcacg agtttttctc CattcctctC gtatatCgtc gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttCat gtcattCcca tttaggtCCg CD 151 attCggatCC ctcCgttgtt tCcttttcCt Cccgcacctt ttCCtcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt acttattgct CD 251 tgccaaagat cctacttcta caattggtgg gtcacCgggt tattcaaata CD 301 agtCgtgttt tctgtggttt tcccatgtta caactttCgt accaattcgg CD 351 tcgatccgga atggatCggt taaacattCC attagggagc ctggtcttga CD 401 ctcttctgtg tggtattcat tctCgttCgg ctcttggaat cacatccagc CD 451 agtggttgga acagctCgca aaatCCaacc acttCaccta ctttattgcc CD 501 cctaaccgtt tCtCgtacct ctattgaaac agaatggttt catgttcttt CD 551 CatCgattgg ttattCctCt ctgttCgtat ctctttttcc aatttCggtc CD 601 tcgattagtt tacaagatta a FT EDITED CDNA CD 1 atgagacgac tttttTttga actatatTat aaactgatct tcTcctccac CD 51 accaatcacg agtttttctc TattcctctT gtatatTgtc gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttTat gtcattTcca tttaggtTTg CD 151 attTggatTT ctcTgttgtt tTcttttcTt Tccgcacctt ttTTtcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt acttattgct CD 251 tgccaaagat cctacttcta caattggtgg gtcacTgggt tattcaaata CD 301 agtTgtgttt tctgtggttt tcccatgtta caactttTgt accaattcgg CD 351 tcgatccgga atggatTggt taaacattTT attagggagc ctggtcttga CD 401 ctcttctgtg tggtattcat tctTgttTgg ctcttggaat cacatccagc CD 451 agtggttgga acagctTgca aaatTTaacc acttTaccta ctttattgcc CD 501 cctaaccgtt tTtTgtacct ctattgaaac agaatggttt catgttcttt CD 551 TatTgattgg ttattTctTt ctgttTgtat ctctttttcc aatttTggtc CD 601 tcgattagtt tacaagatta a SQ SEQUENCE 207 AA; MRRLFFELYY KLIFSSTPIT SFSLFLLYIV VTPLMLGFEK DFLCHFHLGL IWISLLFSFL SAPFFRNEKE DGTLELYYLS TYCLPKILLL QLVGHWVIQI SCVFCGFPML QLLYQFGRSG MDWLNILLGS LVLTLLCGIH SCLALGITSS SGWNSLQNLT TLPTLLPLTV FCTSIETEWF HVLLLIGYFF LFVSLFPILV SISLQD* // ID AP006444_59 STANDARD; PRT; 508 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : atp1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98904.1 FT PROTEIN_NAME : ATPase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 135659 - 137182 FT DIRECTIONS : negative FT EDITING : 5 P(ccC) -> P(ccT) FT EDITING : 393 S(tCa) -> L(tTa) FT EDITING : 431 P(cCg) -> L(cTg) FT EDITING : 472 P(cCa) -> L(cTa) FT EDITING : 495 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1524 NT; CD 1 atggaattat ctccCagagc tgcggaacta acgaatctat tcgaaagtcg CD 51 aattaggaac ttttacgcga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacaagttt atggattgaa cgagattcaa CD 151 gctggggaaa tggttctttt tgccaacggt gtgaaaggaa tggccttgaa CD 201 tcttgagaat gagaatgtcg ggattgttgt ctttggtggt gataccgcta CD 251 taaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttccc CD 301 gcgggaaagg ctatgctagg gcgtgtggtc gacgcgatgg gagtacctat CD 351 tgatggaaga ggggctctaa gcgatcacga gcaaagacgt gtcgaagtga CD 401 aagcccctgg gattcttgaa cgtaaatcag tgcacgagcc tatgcaaaca CD 451 gggttaaaag cggtagatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttctaatc ggggaccgac aaactggaaa aacgactatt gctatcgata CD 551 ccatattaaa ccaaaagcaa ataaactcaa gggccacctc tgagagtgag CD 601 acaatgtatt gtgtctatgt agcgattgga cagaaacgct cgactgtggg CD 651 acaattaatt caaactcttg aagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctctgcaatt tttggcccca CD 751 tattccgggt gtgccatggg ggaatatttc cgcgataatg gaatgcacgc CD 801 attaataatc tatgatgatc ttagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggtgat CD 901 gttttctatt tacattcccg tctcttagaa agagcggcta aacgatcgga CD 951 ccagacaggt gcaggtagct tgaccgcctt acccgtcatt gaaacacaag CD 1001 ctggagacgt atcggcctat attcccacca atgtgatctc cattactgat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtc ggcttatctg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtatgc ggtagttCaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgcctttgc tcaatttggc tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct gacagaagta cCgaaacaac CD 1301 cacaatatgc accacttcca attgaaaaac aaatactagt catttatgca CD 1351 gctgtcaatg gattctgtga tcgaatgcca ctagacagaa tctctcaata CD 1401 tgagaaagcc attcCaaata gtgtcaaacc tgaattacta caagccctta CD 1451 aaggtggatt aactaacgaa agaaaaatgg aacCagatgc tttcttaaaa CD 1501 gaaagagctt tagctttaat ttag FT EDITED CDNA CD 1 atggaattat ctccTagagc tgcggaacta acgaatctat tcgaaagtcg CD 51 aattaggaac ttttacgcga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacaagttt atggattgaa cgagattcaa CD 151 gctggggaaa tggttctttt tgccaacggt gtgaaaggaa tggccttgaa CD 201 tcttgagaat gagaatgtcg ggattgttgt ctttggtggt gataccgcta CD 251 taaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttccc CD 301 gcgggaaagg ctatgctagg gcgtgtggtc gacgcgatgg gagtacctat CD 351 tgatggaaga ggggctctaa gcgatcacga gcaaagacgt gtcgaagtga CD 401 aagcccctgg gattcttgaa cgtaaatcag tgcacgagcc tatgcaaaca CD 451 gggttaaaag cggtagatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttctaatc ggggaccgac aaactggaaa aacgactatt gctatcgata CD 551 ccatattaaa ccaaaagcaa ataaactcaa gggccacctc tgagagtgag CD 601 acaatgtatt gtgtctatgt agcgattgga cagaaacgct cgactgtggg CD 651 acaattaatt caaactcttg aagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctctgcaatt tttggcccca CD 751 tattccgggt gtgccatggg ggaatatttc cgcgataatg gaatgcacgc CD 801 attaataatc tatgatgatc ttagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggtgat CD 901 gttttctatt tacattcccg tctcttagaa agagcggcta aacgatcgga CD 951 ccagacaggt gcaggtagct tgaccgcctt acccgtcatt gaaacacaag CD 1001 ctggagacgt atcggcctat attcccacca atgtgatctc cattactgat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtc ggcttatctg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtatgc ggtagttTaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgcctttgc tcaatttggc tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct gacagaagta cTgaaacaac CD 1301 cacaatatgc accacttcca attgaaaaac aaatactagt catttatgca CD 1351 gctgtcaatg gattctgtga tcgaatgcca ctagacagaa tctctcaata CD 1401 tgagaaagcc attcTaaata gtgtcaaacc tgaattacta caagccctta CD 1451 aaggtggatt aactaacgaa agaaaaatgg aacTagatgc tttcttaaaa CD 1501 gaaagagctt tagctttaat ttag SQ SEQUENCE 508 AA; MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGR GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSLKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV LKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA ILNSVKPELL QALKGGLTNE RKMELDAFLK ERALALI* // ID AP006444_61 STANDARD; PRT; 350 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : rpl2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98906.1 FT PROTEIN_NAME : ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 306/2 FT EDITING : 12 F(ttC) -> F(ttT) FT EDITING : 71 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1050 NT; CD 1 atgagaccag ggagagcaag agcacttaga caattCactt tgagtacagg CD 51 aaagtctgct ggtaggaatt cctcagggcg tattacggtt tttcaccgag CD 101 ggggtggctc gaagcgattg ctgcgaagaa ttgatctgaa acgaagcact CD 151 tcctctatgg gcattgtaga gagtatagaa tatgacccta atcgttcttc CD 201 tcagatcgct cCagtacgat ggatcaaggg gggctgccag aaaaaaatga CD 251 acacgatcga ggagttagct ccgccgcgca agatcctcga acctaccacg CD 301 aacaccatca gcggcctctt ttcgttctct ttcctgcccg ggaaggtgga CD 351 tcaaagaaag gtagcttgct tctctcctgg actgatggcc gcttatgtag CD 401 tggtcggcct tcctaccgga atgcctcctt tgtcttcgta taagagcgcc CD 451 tttgctagta agggcgcagg aagcacaaaa actttagtga aggacgtctt CD 501 cttctctgcc ttctcctctc caaaggccaa gagagagact gcatcccttg CD 551 ccttcgctag ctcttttggt ttcccaagga tagcggtagc tggggttcct CD 601 accgctttct tcgctccgcg aatgagacag aaagtgagag gaaaaagcac CD 651 gttctctctt tgcgaggtcc gaaagtggag aacgcatagc attctctggg CD 701 cacataggat caaaggtaaa gcagggcttt cttggcagag ttttaggcgg CD 751 caagatactt tagggcttgt tggagctgct gggcataaca aatcgaagcc CD 801 gaagacggat caaggtagct tgcctgccaa gccgataggc gaaagggcga CD 851 agcaactcaa agctctccgg ggtttgaggg cgaaggatgg agcgtgcaaa CD 901 gtcgatcgtg cacctgtcac ttatataata gccagtcatc aattagaagc CD 951 aggcaaaatg gtgatgaatt gcgattggtc caaaccttcg accagctcct CD 1001 tctcgcaatc cgcccagaat gaccatccta agcccttatt cactgtgtga FT EDITED CDNA CD 1 atgagaccag ggagagcaag agcacttaga caattTactt tgagtacagg CD 51 aaagtctgct ggtaggaatt cctcagggcg tattacggtt tttcaccgag CD 101 ggggtggctc gaagcgattg ctgcgaagaa ttgatctgaa acgaagcact CD 151 tcctctatgg gcattgtaga gagtatagaa tatgacccta atcgttcttc CD 201 tcagatcgct cTagtacgat ggatcaaggg gggctgccag aaaaaaatga CD 251 acacgatcga ggagttagct ccgccgcgca agatcctcga acctaccacg CD 301 aacaccatca gcggcctctt ttcgttctct ttcctgcccg ggaaggtgga CD 351 tcaaagaaag gtagcttgct tctctcctgg actgatggcc gcttatgtag CD 401 tggtcggcct tcctaccgga atgcctcctt tgtcttcgta taagagcgcc CD 451 tttgctagta agggcgcagg aagcacaaaa actttagtga aggacgtctt CD 501 cttctctgcc ttctcctctc caaaggccaa gagagagact gcatcccttg CD 551 ccttcgctag ctcttttggt ttcccaagga tagcggtagc tggggttcct CD 601 accgctttct tcgctccgcg aatgagacag aaagtgagag gaaaaagcac CD 651 gttctctctt tgcgaggtcc gaaagtggag aacgcatagc attctctggg CD 701 cacataggat caaaggtaaa gcagggcttt cttggcagag ttttaggcgg CD 751 caagatactt tagggcttgt tggagctgct gggcataaca aatcgaagcc CD 801 gaagacggat caaggtagct tgcctgccaa gccgataggc gaaagggcga CD 851 agcaactcaa agctctccgg ggtttgaggg cgaaggatgg agcgtgcaaa CD 901 gtcgatcgtg cacctgtcac ttatataata gccagtcatc aattagaagc CD 951 aggcaaaatg gtgatgaatt gcgattggtc caaaccttcg accagctcct CD 1001 tctcgcaatc cgcccagaat gaccatccta agcccttatt cactgtgtga SQ SEQUENCE 350 AA; MRPGRARALR QFTLSTGKSA GRNSSGRITV FHRGGGSKRL LRRIDLKRST SSMGIVESIE YDPNRSSQIA LVRWIKGGCQ KKMNTIEELA PPRKILEPTT NTISGLFSFS FLPGKVDQRK VACFSPGLMA AYVVVGLPTG MPPLSSYKSA FASKGAGSTK TLVKDVFFSA FSSPKAKRET ASLAFASSFG FPRIAVAGVP TAFFAPRMRQ KVRGKSTFSL CEVRKWRTHS ILWAHRIKGK AGLSWQSFRR QDTLGLVGAA GHNKSKPKTD QGSLPAKPIG ERAKQLKALR GLRAKDGACK VDRAPVTYII ASHQLEAGKM VMNCDWSKPS TSSFSQSAQN DHPKPLFTV* // ID AP006444_62 STANDARD; PRT; 270 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT N-terminal not determined FT GENE : orfX FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98907.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 143241 - 144050 FT DIRECTIONS : positive FT EDITING : 9 H(Cat) -> Y(Tat) FT EDITING : 12 S(tCg) -> L(tTg) FT EDITING : 25 R(Cgg) -> W(Tgg) FT EDITING : 41 P(Ccg) -> S(Tcg) FT EDITING : 46 S(tCt) -> F(tTt) FT EDITING : 47 P(cCa) -> L(cTa) FT EDITING : 50 S(tCa) -> L(tTa) FT EDITING : 113 L(Ctc) -> F(Ttc) FT EDITING : 114 H(Cat) -> Y(Tat) FT EDITING : 118 S(tCt) -> F(tTt) FT EDITING : 119 R(Cgc) -> C(Tgc) FT EDITING : 128 P(CCt) -> F(TTt) FT EDITING : 129 P(Ccc) -> S(Tcc) FT EDITING : 130 R(Cgg) -> W(Tgg) FT EDITING : 139 P(cCa) -> L(cTa) FT EDITING : 161 H(Cat) -> Y(Tat) FT EDITING : 169 S(tCg) -> L(tTg) FT EDITING : 172 P(Cca) -> S(Tca) FT EDITING : 188 P(cCa) -> L(cTa) FT EDITING : 207 P(Ccg) -> S(Tcg) FT EDITING : 209 L(Ctc) -> F(Ttc) FT EDITING : 214 S(tCc) -> F(tTc) FT EDITING : 223 I(atC) -> I(atT) FT EDITING : 226 R(Cgt) -> C(Tgt) FT EDITING : 241 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 810 NT; CD 1 attacttata tatcctatga atttCatttc gcatCggaaa cgattctagg CD 51 agaagttcga atccgttccg ttCggatatt gatcggtctt ggtttgacat CD 101 ggtttacgtg ttactggttc Ccggaagagt taatatCtcC attagcgtCa CD 151 ccctttctta ccctgccttt tgactcgtat tttgtttgta cacaattaac CD 201 ggaggccttt tcgacattta ttgcaacgtc ttcaatagca tgctcttatt CD 251 tcgtctttcc tttaataagt tatcaaattt ggtgcttttt gatccccagt CD 301 tgctatggag aacaaaggac gaaatacaat cgattcCtcC atttaagtgg CD 351 ttCtCgcttc ttcttgttcc tgttcctaac tCCtCccCgg gtcgttccca CD 401 atgtttggca ctttcCatac ttcgtgggtg caacatcaac aaattcgctc CD 451 atgatcaagt tacaacctaa gatctatgac Catattatgt taactgttcg CD 501 tatttCgttc attCcatcgg tatgctccca ggtacctgta attgtgatct CD 551 gtttgccaga acCaaggggt ctttctttgg aaaccttcac gaacaatcgt CD 601 cgttttttga tggtttttCc gcttCtcaca gctgctcttt Ccacacctcc CD 651 ggatatctgg tgccaaatCg tcgccCgttt ccttatttct ttgataatag CD 701 agttggctat ttttgtggca tCgattgtac aagttcgtga agagggctgg CD 751 acgagtggaa tgagggagag cggctcgatc gagaaaaaaa agaagagtag CD 801 ccccccctag FT EDITED CDNA CD 1 attacttata tatcctatga atttTatttc gcatTggaaa cgattctagg CD 51 agaagttcga atccgttccg ttTggatatt gatcggtctt ggtttgacat CD 101 ggtttacgtg ttactggttc Tcggaagagt taatatTtcT attagcgtTa CD 151 ccctttctta ccctgccttt tgactcgtat tttgtttgta cacaattaac CD 201 ggaggccttt tcgacattta ttgcaacgtc ttcaatagca tgctcttatt CD 251 tcgtctttcc tttaataagt tatcaaattt ggtgcttttt gatccccagt CD 301 tgctatggag aacaaaggac gaaatacaat cgattcTtcT atttaagtgg CD 351 ttTtTgcttc ttcttgttcc tgttcctaac tTTtTccTgg gtcgttccca CD 401 atgtttggca ctttcTatac ttcgtgggtg caacatcaac aaattcgctc CD 451 atgatcaagt tacaacctaa gatctatgac Tatattatgt taactgttcg CD 501 tatttTgttc attTcatcgg tatgctccca ggtacctgta attgtgatct CD 551 gtttgccaga acTaaggggt ctttctttgg aaaccttcac gaacaatcgt CD 601 cgttttttga tggtttttTc gcttTtcaca gctgctcttt Tcacacctcc CD 651 ggatatctgg tgccaaatTg tcgccTgttt ccttatttct ttgataatag CD 701 agttggctat ttttgtggca tTgattgtac aagttcgtga agagggctgg CD 751 acgagtggaa tgagggagag cggctcgatc gagaaaaaaa agaagagtag CD 801 ccccccctag SQ SEQUENCE 270 AA; ITYISYEFYF ALETILGEVR IRSVWILIGL GLTWFTCYWF SEELIFLLAL PFLTLPFDSY FVCTQLTEAF STFIATSSIA CSYFVFPLIS YQIWCFLIPS CYGEQRTKYN RFFYLSGFCF FLFLFLTFSW VVPNVWHFLY FVGATSTNSL MIKLQPKIYD YIMLTVRILF ISSVCSQVPV IVICLPELRG LSLETFTNNR RFLMVFSLFT AALFTPPDIW CQIVACFLIS LIIELAIFVA LIVQVREEGW TSGMRESGSI EKKKKSSPP* // ID AP006444_63 STANDARD; PRT; 496 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : nad4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98908.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 154/2 FT INTRON 326/1 FT INTRON 467/0 FT EDITING : 10 S(tCt) -> F(tTt) FT EDITING : 25 T(aCt) -> I(aTt) FT EDITING : 26 P(cCt) -> L(cTt) FT EDITING : 36 P(cCg) -> L(cTg) FT EDITING : 42 L(Ctg) -> L(Ttg) FT EDITING : 53 P(cCt) -> L(cTt) FT EDITING : 55 P(cCt) -> L(cTt) FT EDITING : 56 R(Cgg) -> W(Tgg) FT EDITING : 66 S(tCt) -> F(tTt) FT EDITING : 106 S(tCa) -> L(tTa) FT EDITING : 121 T(aCa) -> I(aTa) FT EDITING : 126 R(Cgt) -> C(Tgt) FT EDITING : 135 R(Cgc) -> C(Tgc) FT EDITING : 146 P(CCc) -> F(TTc) FT EDITING : 150 P(cCa) -> L(cTa) FT EDITING : 203 S(tCa) -> L(tTa) FT EDITING : 220 S(tCt) -> F(tTt) FT EDITING : 223 S(tCt) -> F(tTt) FT EDITING : 256 P(cCt) -> L(cTt) FT EDITING : 262 H(Cac) -> Y(Tac) FT EDITING : 279 S(tCt) -> F(tTt) FT EDITING : 299 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1488 NT; CD 1 atgttagaac atttctgtga atgctattCt aatctaagtg gtcttattct CD 51 gtgtcctgtg ctaggaagca ttaCtcCtct tttcattcca aattcaagaa CD 101 tacgacCgat acgattaatt ggtCtgtgtg cctctcttat tacttttttg CD 151 tattctcCtg ttcCtCggat acaattcgac tcttctacgg ccaaatCtca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc aatttttatt CD 251 tgggtataga cggtatctct ttattcttcg tgatattgac cacatttctg CD 301 atccctattt gcatttCagt gggttggtct ggtatgagaa gttatgggaa CD 351 agagtatatt aCagcatttt taattCgtga atttctaatg atcgccgtgt CD 401 tcCgcatgct ggatcttcta ctattctatg tttttCCcga aagcgtgcCa CD 451 atccctatgt tcattattat aggagtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctttatac tttacttgga tctcttttta CD 551 tgctattagc tattctgttg attcttttcc aaacaggaac caccgattta CD 601 caaatatCat taaccacaga atttagtgag cggcgccaaa tctttctatg CD 651 gattgcttCt ttcgcctCtt tcgccgtcaa agtgcctatg gtaccagttc CD 701 atatttggtt acccgaagct catgtagagg cacctacggc aggatccgtc CD 751 atcttggcag gaattcCttt aaaatttgga accCacgggt ttttaagatt CD 801 ttcaataccc atgtttcccg aagcgacact ttgttCtact cctttcattt CD 851 atactttaag cgcgattgct ataatatata cttccttgac cacttCaaga CD 901 cagatcgatc taaagaagat cattgcttac tcctcagtag cccatatgaa CD 951 tctggtgact attggtatgt ttagtccgaa catacaggga attggaggta CD 1001 gtattctacc gatgttaagt catggactgg ttccttcagc cctttttcta CD 1051 tgtgttggtg ttctatatga ccgacataag actcgacttg ttagatatta CD 1101 cggaggttta gtgagcacca tgccgaatct ctctaccatt ttcttttctt CD 1151 ttactttggc caatatgagt tcacctggta ctagcagctt tatcggggaa CD 1201 tttcccatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 agcagcgctt gggatgattt taggtgcggc ctattccctt tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacccg atttcctcca taaattctcc CD 1351 gattcaaatg gcagagaagt ttccatattt ataccttttc ttgttggact CD 1401 cgttcggatg ggtgttcacc ccaaagtgtt cccggactgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggcaaat ttcattga FT EDITED CDNA CD 1 atgttagaac atttctgtga atgctattTt aatctaagtg gtcttattct CD 51 gtgtcctgtg ctaggaagca ttaTtcTtct tttcattcca aattcaagaa CD 101 tacgacTgat acgattaatt ggtTtgtgtg cctctcttat tacttttttg CD 151 tattctcTtg ttcTtTggat acaattcgac tcttctacgg ccaaatTtca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc aatttttatt CD 251 tgggtataga cggtatctct ttattcttcg tgatattgac cacatttctg CD 301 atccctattt gcatttTagt gggttggtct ggtatgagaa gttatgggaa CD 351 agagtatatt aTagcatttt taattTgtga atttctaatg atcgccgtgt CD 401 tcTgcatgct ggatcttcta ctattctatg tttttTTcga aagcgtgcTa CD 451 atccctatgt tcattattat aggagtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctttatac tttacttgga tctcttttta CD 551 tgctattagc tattctgttg attcttttcc aaacaggaac caccgattta CD 601 caaatatTat taaccacaga atttagtgag cggcgccaaa tctttctatg CD 651 gattgcttTt ttcgcctTtt tcgccgtcaa agtgcctatg gtaccagttc CD 701 atatttggtt acccgaagct catgtagagg cacctacggc aggatccgtc CD 751 atcttggcag gaattcTttt aaaatttgga accTacgggt ttttaagatt CD 801 ttcaataccc atgtttcccg aagcgacact ttgttTtact cctttcattt CD 851 atactttaag cgcgattgct ataatatata cttccttgac cacttTaaga CD 901 cagatcgatc taaagaagat cattgcttac tcctcagtag cccatatgaa CD 951 tctggtgact attggtatgt ttagtccgaa catacaggga attggaggta CD 1001 gtattctacc gatgttaagt catggactgg ttccttcagc cctttttcta CD 1051 tgtgttggtg ttctatatga ccgacataag actcgacttg ttagatatta CD 1101 cggaggttta gtgagcacca tgccgaatct ctctaccatt ttcttttctt CD 1151 ttactttggc caatatgagt tcacctggta ctagcagctt tatcggggaa CD 1201 tttcccatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 agcagcgctt gggatgattt taggtgcggc ctattccctt tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacccg atttcctcca taaattctcc CD 1351 gattcaaatg gcagagaagt ttccatattt ataccttttc ttgttggact CD 1401 cgttcggatg ggtgttcacc ccaaagtgtt cccggactgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggcaaat ttcattga SQ SEQUENCE 496 AA; MLEHFCECYF NLSGLILCPV LGSIILLFIP NSRIRLIRLI GLCASLITFL YSLVLWIQFD SSTAKFQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL IPICILVGWS GMRSYGKEYI IAFLICEFLM IAVFCMLDLL LFYVFFESVL IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL QILLTTEFSE RRQIFLWIAF FAFFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGILLKFG TYGFLRFSIP MFPEATLCFT PFIYTLSAIA IIYTSLTTLR QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE FPILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH* // ID AP006444_66 STANDARD; PRT; 206 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : nad6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98911.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 164882 - 165499 FT DIRECTIONS : positive FT EDITING : 9 P(cCt) -> L(cTt) FT EDITING : 18 A(gCa) -> V(gTa) FT EDITING : 30 P(CCc) -> F(TTc) FT EDITING : 32 P(cCa) -> L(cTa) FT EDITING : 35 R(Cgc) -> C(Tgc) FT EDITING : 54 P(cCa) -> L(cTa) FT EDITING : 57 H(Cat) -> Y(Tat) FT EDITING : 64 S(tCa) -> L(tTa) FT EDITING : 149 S(tCt) -> F(tTt) FT EDITING : 155 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 618 NT; CD 1 atgatacttt ctgttttgtc gagccCtgct ttggtctctg gtttgatggt CD 51 tgCacgtgct aaaaatccgg tacattccgt tttgtttCCc atccCagtct CD 101 ttCgcgacac ttcaggttta cttcttttgt taggtctcga cttcttcgct CD 151 atgatcttcc CagtagttCa tataggagct atagccgttt Cattcctttt CD 201 cgttgttatg atgttccata ttcaaatagc ggagattcac gaagaagtat CD 251 tgcgctattt accagtgagt gggattattg gactgatctt ttggtgggaa CD 301 atgtttttca ttttagataa tgaaagcatt ccattactac caacccaaag CD 351 aaatacgacc tctcttagat atacggttta tgccggaaag gtacgaagtt CD 401 ggactaattt ggaaacattg ggaaatttac tttataccta ctattCtgtc CD 451 tggtttttgg ttCctagtct tattttatta gtagccatga ttggggctat CD 501 agtactgact atgcatagga ctactaaggt gaaaagacag gatgtattcc CD 551 gacgaaatgc tattgatttt aggaggacta taatgaggag gacgactgac CD 601 ccactcacga tctactaa FT EDITED CDNA CD 1 atgatacttt ctgttttgtc gagccTtgct ttggtctctg gtttgatggt CD 51 tgTacgtgct aaaaatccgg tacattccgt tttgtttTTc atccTagtct CD 101 ttTgcgacac ttcaggttta cttcttttgt taggtctcga cttcttcgct CD 151 atgatcttcc TagtagttTa tataggagct atagccgttt Tattcctttt CD 201 cgttgttatg atgttccata ttcaaatagc ggagattcac gaagaagtat CD 251 tgcgctattt accagtgagt gggattattg gactgatctt ttggtgggaa CD 301 atgtttttca ttttagataa tgaaagcatt ccattactac caacccaaag CD 351 aaatacgacc tctcttagat atacggttta tgccggaaag gtacgaagtt CD 401 ggactaattt ggaaacattg ggaaatttac tttataccta ctattTtgtc CD 451 tggtttttgg ttTctagtct tattttatta gtagccatga ttggggctat CD 501 agtactgact atgcatagga ctactaaggt gaaaagacag gatgtattcc CD 551 gacgaaatgc tattgatttt aggaggacta taatgaggag gacgactgac CD 601 ccactcacga tctactaa SQ SEQUENCE 206 AA; MILSVLSSLA LVSGLMVVRA KNPVHSVLFF ILVFCDTSGL LLLLGLDFFA MIFLVVYIGA IAVLFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYFV WFLVSSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD PLTIY* // ID AP006444_69 STANDARD; PRT; 528 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : cox1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98915.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 184280 - 185863 FT DIRECTIONS : negative FT EDITING : 112 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 1584 NT; CD 1 atgaaaaatc tggttcgatg gctgttctcc acaaaccaca aggatatagg CD 51 gactctctat ttcattttcg gtgccattgc tggagtgatg ggcacatgct CD 101 tctcagtact tattcgtatg gaattagcac gacccggcga tcaaattctt CD 151 ggtgggaatc atcaacttta taatgtttta ataacagctc atgctttttt CD 201 aatgatcttt tttatggtta tgccggcgat gataggtgga tttggtaatt CD 251 ggtttgttcc gattctgata ggtgcacctg acatggcatt tccacgatta CD 301 aataatattt cattctggtt gttgccacca agtcCcttgc tcctattaag CD 351 ctcagcctta gtagaagtag gtagcggcac tgggtggacg gtctatccgc CD 401 ccttaagtgg tattaccagt cattctggag gagcagttga tttagcaatt CD 451 tttagtcttc atctatctgg tgtttcatcc attttaggtt ctatcaattt CD 501 tataacaact atcttcaaca tgcgtggacc tggaatgact atgcatagat CD 551 tacccctatt tgtgtggtcc gttctagtga cagcattcct acttttatta CD 601 tcactcccgg tactggcagg ggcaattacc atgttattaa ccgatcgaaa CD 651 ctttaataca accttttttg atcccgctgg agggggagac ccaattttat CD 701 accagcatct cttttggttc ttcggtcatc cagaggtgta tattctcatt CD 751 ctgcctggat tcggtatcat aagtcatatc gtttctactt tttcgggaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgatc agtattggtg CD 851 tcttaggatt tcttgtttgg gctcatcata tgtttactgt gggcttagac CD 901 gtagataccc gtgcctactt caccgcagct accatgatca tagctgtccc CD 951 cactggaatc aaaatcttta gttggatcgc taccatgtgg gggggttcga CD 1001 tacaatacaa aacacccatg ttatttgctg taggatttat ctttttgttc CD 1051 accataggag gactcactgg aatagtcctg gcaaattcag ggctagacat CD 1101 tgctctacat gatacttatt atgtggttgc acatttccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ttatttgcag gattttacta ttgggtgggt CD 1201 aaaatctttg gtcggacata ccctgaaact ttaggtcaaa tccatttttg CD 1251 gatcactttt ttcggggtta atttgacctt ctttcctatg catttcttag CD 1301 ggctttcagg tatgccacgt cgtattccag attatccaga tgcttacgct CD 1351 ggatggaatg ccctttccag ttttggctct tatatatccg tagttgggat CD 1401 ttgttgtttc ttcgtggtcg taacaatcac tttaagcagt ggaaataaca CD 1451 aaagatgtgc tcctagtcct tgggctcttg aacttaattc aactacactg CD 1501 gaatggatgg tacaaagtcc tcctgctttt catacttttg gagaacttcc CD 1551 agctatcaag gagacgaaaa gctatgtgaa gtaa FT EDITED CDNA CD 1 atgaaaaatc tggttcgatg gctgttctcc acaaaccaca aggatatagg CD 51 gactctctat ttcattttcg gtgccattgc tggagtgatg ggcacatgct CD 101 tctcagtact tattcgtatg gaattagcac gacccggcga tcaaattctt CD 151 ggtgggaatc atcaacttta taatgtttta ataacagctc atgctttttt CD 201 aatgatcttt tttatggtta tgccggcgat gataggtgga tttggtaatt CD 251 ggtttgttcc gattctgata ggtgcacctg acatggcatt tccacgatta CD 301 aataatattt cattctggtt gttgccacca agtcTcttgc tcctattaag CD 351 ctcagcctta gtagaagtag gtagcggcac tgggtggacg gtctatccgc CD 401 ccttaagtgg tattaccagt cattctggag gagcagttga tttagcaatt CD 451 tttagtcttc atctatctgg tgtttcatcc attttaggtt ctatcaattt CD 501 tataacaact atcttcaaca tgcgtggacc tggaatgact atgcatagat CD 551 tacccctatt tgtgtggtcc gttctagtga cagcattcct acttttatta CD 601 tcactcccgg tactggcagg ggcaattacc atgttattaa ccgatcgaaa CD 651 ctttaataca accttttttg atcccgctgg agggggagac ccaattttat CD 701 accagcatct cttttggttc ttcggtcatc cagaggtgta tattctcatt CD 751 ctgcctggat tcggtatcat aagtcatatc gtttctactt tttcgggaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgatc agtattggtg CD 851 tcttaggatt tcttgtttgg gctcatcata tgtttactgt gggcttagac CD 901 gtagataccc gtgcctactt caccgcagct accatgatca tagctgtccc CD 951 cactggaatc aaaatcttta gttggatcgc taccatgtgg gggggttcga CD 1001 tacaatacaa aacacccatg ttatttgctg taggatttat ctttttgttc CD 1051 accataggag gactcactgg aatagtcctg gcaaattcag ggctagacat CD 1101 tgctctacat gatacttatt atgtggttgc acatttccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ttatttgcag gattttacta ttgggtgggt CD 1201 aaaatctttg gtcggacata ccctgaaact ttaggtcaaa tccatttttg CD 1251 gatcactttt ttcggggtta atttgacctt ctttcctatg catttcttag CD 1301 ggctttcagg tatgccacgt cgtattccag attatccaga tgcttacgct CD 1351 ggatggaatg ccctttccag ttttggctct tatatatccg tagttgggat CD 1401 ttgttgtttc ttcgtggtcg taacaatcac tttaagcagt ggaaataaca CD 1451 aaagatgtgc tcctagtcct tgggctcttg aacttaattc aactacactg CD 1501 gaatggatgg tacaaagtcc tcctgctttt catacttttg gagaacttcc CD 1551 agctatcaag gagacgaaaa gctatgtgaa gtaa SQ SEQUENCE 528 AA; MKNLVRWLFS TNHKDIGTLY FIFGAIAGVM GTCFSVLIRM ELARPGDQIL GGNHQLYNVL ITAHAFLMIF FMVMPAMIGG FGNWFVPILI GAPDMAFPRL NNISFWLLPP SLLLLLSSAL VEVGSGTGWT VYPPLSGITS HSGGAVDLAI FSLHLSGVSS ILGSINFITT IFNMRGPGMT MHRLPLFVWS VLVTAFLLLL SLPVLAGAIT MLLTDRNFNT TFFDPAGGGD PILYQHLFWF FGHPEVYILI LPGFGIISHI VSTFSGKPVF GYLGMVYAMI SIGVLGFLVW AHHMFTVGLD VDTRAYFTAA TMIIAVPTGI KIFSWIATMW GGSIQYKTPM LFAVGFIFLF TIGGLTGIVL ANSGLDIALH DTYYVVAHFH YVLSMGAVFA LFAGFYYWVG KIFGRTYPET LGQIHFWITF FGVNLTFFPM HFLGLSGMPR RIPDYPDAYA GWNALSSFGS YISVVGICCF FVVVTITLSS GNNKRCAPSP WALELNSTTL EWMVQSPPAF HTFGELPAIK ETKSYVK* // ID AP006444_72 STANDARD; PRT; 555 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : rps3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98918.1 FT PROTEIN_NAME : ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 26/0 FT EDITING : 22 R(Cgg) -> W(Tgg) FT EDITING : 199 F(ttC) -> F(ttT) FT EDITING : 215 S(tcC) -> S(tcT) FT EDITING : 446 S(agC) -> S(agT) FT EDITING : 488 S(tcC) -> S(tcT) FT EDITING : 510 R(Cgt) -> C(Tgt) FT EDITING : 521 P(Cct) -> S(Tct) FT EDITING : 531 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1665 NT; CD 1 atggcacgaa aaggaaatcc gatttcggta agacttggaa aaaatcgtag CD 51 ttcagattca agtCggttca gtgagtatta ttatggtaaa tttgtgtatc CD 101 aagatgtcaa tctgagatct tatttcggtt cgatacgtcc acctacgaga CD 151 ctcacctttg gctttcgtct cggtaggtgt attcttctac attttcctaa CD 201 aagaacattc attcatttct ttcttccccg tcgaccacga cgactgaaac CD 251 gacgtgaaaa aactagaccc ggaaaggaga agggccggtg gtggacgaca CD 301 ttcgggaaag ccgggccgat cgggtgtctt cgcgacgata cagaagaaga CD 351 acgaaacgaa gtgagaggcc ggggggcaag gaaaagagtc gagtcgatca CD 401 ggctcgacga ccgaaagaag caaaacgaaa tccgggggtg gccgaaaaaa CD 451 aaacaacgct atggatacca tgaccgatca ccatcgataa agaagaatct CD 501 ttctaaatca cttcggatca gcggggcctt caagcatccg aaatacgccg CD 551 gggttgtaaa tgacatagcg ttcctgatag aaaatgacga ctccttCaga CD 601 aaaacgaagt tattcaagtt ctttttccca aagaagtccc gctcCgacgg CD 651 cccgacgagt tatctacgga ccctccctgc agtgcgcccc tccttgaatt CD 701 ttttggtcat gcaatacttt tttaatacaa agaaccaaat gaatttcgac CD 751 cccgtcgtag ttctcaatca tttcgtggca ccgggcgcgg ctgaaccatc CD 801 tacgatgggg agagcgaatg cacagggaag aagcttacag aagagaatac CD 851 gttctcgtat cgcttttttt gtagaaagct cgaccagcga gaaaaagtgt CD 901 ttggccgaag ccaaaaatag gttgacccac ttcattcgct tggcgaatga CD 951 tcttcgcttc gcgggaacaa ctaaaaccac catctcgctc tttccattct CD 1001 tcggtgctac ctttttcttt ctaagagatg gggttggggt gtataataac CD 1051 cttgatgccc gggaacaact actcaatcaa ttaagggtca aatgttggaa CD 1101 ccttttgggt aaggataagg taatggaatt gatagagaaa ttcaaaaacc CD 1151 taggtgggat agaagaattg ataaaggtaa tagatatgat gatagaaatc CD 1201 atactgagaa agagaggaat tccgtatagg tacaactctt atttttacga CD 1251 agtaaaaaaa atgcgatctt tcttgtctaa tagaacaaac actaagacct CD 1301 taattgagtc agtcaaaata aaatctgttt atcaaagCgc ttctctgatt CD 1351 gctcaagaca tctcttttca actgaagaac aaaagaagat catttcattc CD 1401 catttttgct aaaatagtga aggagattcc aaaaagggtg gagggaatcc CD 1451 gtatatgttt ttcCggtcga ttaaaagacg cagcagaaaa agctcaaact CD 1501 aaatgctata agcatagaaa aacttctCgt aatgtattta accagaaaat CD 1551 cgattatgct Cctgcggaag tatctactcg ttacggaatc tCaggtgtca CD 1601 aagtgtggat ttcatatagt caaaaaaaag ggggacgtgc tatatccgaa CD 1651 acgtacgaaa tatag FT EDITED CDNA CD 1 atggcacgaa aaggaaatcc gatttcggta agacttggaa aaaatcgtag CD 51 ttcagattca agtTggttca gtgagtatta ttatggtaaa tttgtgtatc CD 101 aagatgtcaa tctgagatct tatttcggtt cgatacgtcc acctacgaga CD 151 ctcacctttg gctttcgtct cggtaggtgt attcttctac attttcctaa CD 201 aagaacattc attcatttct ttcttccccg tcgaccacga cgactgaaac CD 251 gacgtgaaaa aactagaccc ggaaaggaga agggccggtg gtggacgaca CD 301 ttcgggaaag ccgggccgat cgggtgtctt cgcgacgata cagaagaaga CD 351 acgaaacgaa gtgagaggcc ggggggcaag gaaaagagtc gagtcgatca CD 401 ggctcgacga ccgaaagaag caaaacgaaa tccgggggtg gccgaaaaaa CD 451 aaacaacgct atggatacca tgaccgatca ccatcgataa agaagaatct CD 501 ttctaaatca cttcggatca gcggggcctt caagcatccg aaatacgccg CD 551 gggttgtaaa tgacatagcg ttcctgatag aaaatgacga ctccttTaga CD 601 aaaacgaagt tattcaagtt ctttttccca aagaagtccc gctcTgacgg CD 651 cccgacgagt tatctacgga ccctccctgc agtgcgcccc tccttgaatt CD 701 ttttggtcat gcaatacttt tttaatacaa agaaccaaat gaatttcgac CD 751 cccgtcgtag ttctcaatca tttcgtggca ccgggcgcgg ctgaaccatc CD 801 tacgatgggg agagcgaatg cacagggaag aagcttacag aagagaatac CD 851 gttctcgtat cgcttttttt gtagaaagct cgaccagcga gaaaaagtgt CD 901 ttggccgaag ccaaaaatag gttgacccac ttcattcgct tggcgaatga CD 951 tcttcgcttc gcgggaacaa ctaaaaccac catctcgctc tttccattct CD 1001 tcggtgctac ctttttcttt ctaagagatg gggttggggt gtataataac CD 1051 cttgatgccc gggaacaact actcaatcaa ttaagggtca aatgttggaa CD 1101 ccttttgggt aaggataagg taatggaatt gatagagaaa ttcaaaaacc CD 1151 taggtgggat agaagaattg ataaaggtaa tagatatgat gatagaaatc CD 1201 atactgagaa agagaggaat tccgtatagg tacaactctt atttttacga CD 1251 agtaaaaaaa atgcgatctt tcttgtctaa tagaacaaac actaagacct CD 1301 taattgagtc agtcaaaata aaatctgttt atcaaagTgc ttctctgatt CD 1351 gctcaagaca tctcttttca actgaagaac aaaagaagat catttcattc CD 1401 catttttgct aaaatagtga aggagattcc aaaaagggtg gagggaatcc CD 1451 gtatatgttt ttcTggtcga ttaaaagacg cagcagaaaa agctcaaact CD 1501 aaatgctata agcatagaaa aacttctTgt aatgtattta accagaaaat CD 1551 cgattatgct Tctgcggaag tatctactcg ttacggaatc tTaggtgtca CD 1601 aagtgtggat ttcatatagt caaaaaaaag ggggacgtgc tatatccgaa CD 1651 acgtacgaaa tatag SQ SEQUENCE 555 AA; MARKGNPISV RLGKNRSSDS SWFSEYYYGK FVYQDVNLRS YFGSIRPPTR LTFGFRLGRC ILLHFPKRTF IHFFLPRRPR RLKRREKTRP GKEKGRWWTT FGKAGPIGCL RDDTEEERNE VRGRGARKRV ESIRLDDRKK QNEIRGWPKK KQRYGYHDRS PSIKKNLSKS LRISGAFKHP KYAGVVNDIA FLIENDDSFR KTKLFKFFFP KKSRSDGPTS YLRTLPAVRP SLNFLVMQYF FNTKNQMNFD PVVVLNHFVA PGAAEPSTMG RANAQGRSLQ KRIRSRIAFF VESSTSEKKC LAEAKNRLTH FIRLANDLRF AGTTKTTISL FPFFGATFFF LRDGVGVYNN LDAREQLLNQ LRVKCWNLLG KDKVMELIEK FKNLGGIEEL IKVIDMMIEI ILRKRGIPYR YNSYFYEVKK MRSFLSNRTN TKTLIESVKI KSVYQSASLI AQDISFQLKN KRRSFHSIFA KIVKEIPKRV EGIRICFSGR LKDAAEKAQT KCYKHRKTSC NVFNQKIDYA SAEVSTRYGI LGVKVWISYS QKKGGRAISE TYEI* // ID AP006444_73 STANDARD; PRT; 186 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : rpl5 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98919.1 FT PROTEIN_NAME : ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 202531 - 203088 FT DIRECTIONS : positive FT EDITING : 12 S(tCa) -> L(tTa) FT EDITING : 16 P(cCg) -> L(cTg) FT EDITING : 20 P(cCg) -> L(cTg) FT EDITING : 22 H(Cac) -> Y(Tac) FT EDITING : 31 S(tCg) -> L(tTg) FT EDITING : 57 R(Cgc) -> C(Tgc) FT EDITING : 106 S(tCg) -> L(tTg) FT EDITING : 110 S(tCg) -> L(tTg) FT EDITING : 171 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 558 NT; CD 1 atgtttccac tcaattttca ttacgaagat gtatCacgtc aagatcCgtt CD 51 gctcaaacCg aatCacgcca acgttatgga agttcctgga tCgtgtgaaa CD 101 taagagtagt accaaaggca ccctataatt tcataataaa aaatggaaaa CD 151 ttggctatgg agattccgCg cggtcagaaa ttcatacaga cacaaagggg CD 201 ttcgacagga aagtcctttc gatctaatcc attcttgggg tcaaataaag CD 251 acaaaggata tgtaagtgac ctagcacgac aaagcactct ccgagggcat CD 301 ggaatgtcta atttttCggt cagaatctCg acagtaatgt ctctgttaga CD 351 ttttccggtc gaaatacgga aaaactccat tcaattctcg atggaaacgg CD 401 agttttgcga attctccccg gaactggaag atcatttcga gatcttcgaa CD 451 catattagag ggttcaatgt gactattgtc acttcggcca acacacaaga CD 501 tgagacttta cCactgtgga gcggcttttt gcaaaaagat gagggggaaa CD 551 ctcagtaa FT EDITED CDNA CD 1 atgtttccac tcaattttca ttacgaagat gtatTacgtc aagatcTgtt CD 51 gctcaaacTg aatTacgcca acgttatgga agttcctgga tTgtgtgaaa CD 101 taagagtagt accaaaggca ccctataatt tcataataaa aaatggaaaa CD 151 ttggctatgg agattccgTg cggtcagaaa ttcatacaga cacaaagggg CD 201 ttcgacagga aagtcctttc gatctaatcc attcttgggg tcaaataaag CD 251 acaaaggata tgtaagtgac ctagcacgac aaagcactct ccgagggcat CD 301 ggaatgtcta atttttTggt cagaatctTg acagtaatgt ctctgttaga CD 351 ttttccggtc gaaatacgga aaaactccat tcaattctcg atggaaacgg CD 401 agttttgcga attctccccg gaactggaag atcatttcga gatcttcgaa CD 451 catattagag ggttcaatgt gactattgtc acttcggcca acacacaaga CD 501 tgagacttta cTactgtgga gcggcttttt gcaaaaagat gagggggaaa CD 551 ctcagtaa SQ SEQUENCE 186 AA; MFPLNFHYED VLRQDLLLKL NYANVMEVPG LCEIRVVPKA PYNFIIKNGK LAMEIPCGQK FIQTQRGSTG KSFRSNPFLG SNKDKGYVSD LARQSTLRGH GMSNFLVRIL TVMSLLDFPV EIRKNSIQFS METEFCEFSP ELEDHFEIFE HIRGFNVTIV TSANTQDETL LLWSGFLQKD EGETQ* // ID AP006444_75 STANDARD; PRT; 394 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : cob FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98921.1 FT PROTEIN_NAME : apocytochrome b FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 204898 - 206079 FT DIRECTIONS : positive FT EDITING : 96 L(Ctt) -> F(Ttt) FT EDITING : 109 H(Cat) -> Y(Tat) FT EDITING : 190 H(Cat) -> Y(Tat) FT EDITING : 285 H(Cat) -> Y(Tat) FT EDITING : 303 P(cCa) -> L(cTa) FT EDITING : 328 H(Cac) -> Y(Tac) FT EDITING : 362 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 1182 NT; CD 1 atgactataa ggaaccaacg attctctctt cttaaacaac ctatatcctc CD 51 cacacttaat cagcatttag tagattatcc aaccccgagc aatcttagtt CD 101 attggtgggg gttcggtccg ttagctggta tttgtttagt cattcagata CD 151 gtgactggcg tttttttagc tatgcattac acacctcatg tggatttagc CD 201 tttcaacagc gtagaacaca ttatgagaga tgttgaaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttCttat tgtggtttac CD 301 cttcatattt ttcgtggtct atatCatgcg agttatagca gtcctaggga CD 351 atttgtttgg tgtcttggag ttgtaatctt cctattaatg attgtgacag CD 401 cttttatagg atatgtacta ccttggggtc agatgagctt ttggggagct CD 451 acagtaatta caagcttagc tagcgccata cctgtagtag gagataccat CD 501 agtgacttgg ctttggggtg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tcttcatCat ttactcccct ttattttagt aggcgccagt CD 601 cttcttcatc tggccgcatt gcatcaatat ggatcaaata atccattggg CD 651 tgtacattct gagatggata aaatagcttt ttacccttat ttttatgtca CD 701 aggatctagt tggttgggta gcttttgcta tctttttttc tatttggatt CD 751 ttttatgctc ctaatgtttt gggacatccc gacaattata tacctgctaa CD 801 tccgatgtcc accccgcctc atattgtgcc ggaatggtat ttcctaccga CD 851 tcCatgccat tcttcgtagt atacctgaca aagcgggagg tgtagccgca CD 901 atagcacCag tttttatatg tctcttggct ttaccttttt ttaaaagtat CD 951 gtatgtgcgt agttcaagtt ttcgaccgat tCaccaagga atgttttggt CD 1001 tgcttttggc ggattgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaagcaccat ttgttactat tggacaaatt tctCctttgg ttttcttctt CD 1101 gttctttgcc ataacgccca ttctgggacg agttggaaga ggaattccta CD 1151 attcttacac ggatgagact gatcacacct ga FT EDITED CDNA CD 1 atgactataa ggaaccaacg attctctctt cttaaacaac ctatatcctc CD 51 cacacttaat cagcatttag tagattatcc aaccccgagc aatcttagtt CD 101 attggtgggg gttcggtccg ttagctggta tttgtttagt cattcagata CD 151 gtgactggcg tttttttagc tatgcattac acacctcatg tggatttagc CD 201 tttcaacagc gtagaacaca ttatgagaga tgttgaaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttTttat tgtggtttac CD 301 cttcatattt ttcgtggtct atatTatgcg agttatagca gtcctaggga CD 351 atttgtttgg tgtcttggag ttgtaatctt cctattaatg attgtgacag CD 401 cttttatagg atatgtacta ccttggggtc agatgagctt ttggggagct CD 451 acagtaatta caagcttagc tagcgccata cctgtagtag gagataccat CD 501 agtgacttgg ctttggggtg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tcttcatTat ttactcccct ttattttagt aggcgccagt CD 601 cttcttcatc tggccgcatt gcatcaatat ggatcaaata atccattggg CD 651 tgtacattct gagatggata aaatagcttt ttacccttat ttttatgtca CD 701 aggatctagt tggttgggta gcttttgcta tctttttttc tatttggatt CD 751 ttttatgctc ctaatgtttt gggacatccc gacaattata tacctgctaa CD 801 tccgatgtcc accccgcctc atattgtgcc ggaatggtat ttcctaccga CD 851 tcTatgccat tcttcgtagt atacctgaca aagcgggagg tgtagccgca CD 901 atagcacTag tttttatatg tctcttggct ttaccttttt ttaaaagtat CD 951 gtatgtgcgt agttcaagtt ttcgaccgat tTaccaagga atgttttggt CD 1001 tgcttttggc ggattgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaagcaccat ttgttactat tggacaaatt tctTctttgg ttttcttctt CD 1101 gttctttgcc ataacgccca ttctgggacg agttggaaga ggaattccta CD 1151 attcttacac ggatgagact gatcacacct ga SQ SEQUENCE 394 AA; MTIRNQRFSL LKQPISSTLN QHLVDYPTPS NLSYWWGFGP LAGICLVIQI VTGVFLAMHY TPHVDLAFNS VEHIMRDVEG GWLLRYMHAN GASMFFIVVY LHIFRGLYYA SYSSPREFVW CLGVVIFLLM IVTAFIGYVL PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNRFFSLHY LLPFILVGAS LLHLAALHQY GSNNPLGVHS EMDKIAFYPY FYVKDLVGWV AFAIFFSIWI FYAPNVLGHP DNYIPANPMS TPPHIVPEWY FLPIYAILRS IPDKAGGVAA IALVFICLLA LPFFKSMYVR SSSFRPIYQG MFWLLLADCL LLGWIGCQPV EAPFVTIGQI SSLVFFLFFA ITPILGRVGR GIPNSYTDET DHT* // ID AP006444_76 STANDARD; PRT; 261 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : cox2-1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98922.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 234/1 FT EDITING : 9 L(CtC) -> F(TtT) FT EDITING : 24 S(tCt) -> F(tTt) FT EDITING : 46 L(ctC) -> L(ctT) FT EDITING : 85 R(Cgg) -> W(Tgg) FT EDITING : 93 S(tCg) -> L(tTg) FT EDITING : 106 P(Cca) -> S(Tca) FT EDITING : 159 S(tCa) -> L(tTa) FT EDITING : 186 P(cCt) -> L(cTt) FT EDITING : 194 S(tCa) -> L(tTa) FT EDITING : 233 T(aCg) -> M(aTg) FT EDITING : 241 P(Cct) -> S(Tct) FT EDITING : 248 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 783 NT; CD 1 atgattgttc taaaatggtt attcCtCaca atttctcctt gtgatgcagc CD 51 ggaaccatgg caattaggat Ctcaagacgc agctacacct ataatgcaag CD 101 gaataataga cttacatcac gatatctttt tcttcctCat tctgattttg CD 151 gttttcgtat tatggatctt ggttcgcgct ttatggcatt tccactataa CD 201 agaaaatgca atcccgcaaa ggattgttca tggaactact atcgagattc CD 251 ttCggaccat ctttcctagt ctcatctCga tgttcattgc tataccatca CD 301 tttgctctct tatacCcaat ggacgaggta gtagtagatc cagccattac CD 351 tatcaaagct attggacatc aatggtattg gacttatgag tattctgact CD 401 ataacagttc cgatgagcag tcactcactt ttgacagtta tatgattcca CD 451 gaagaagatc tagaattggg tcaatCacgt ttattagaag tggacaatag CD 501 agtggttgta ccagccaaaa ctcatctacg tattattgta acatctgctg CD 551 atgtacCtca tagttgggct gtaccttcct Caggtgtcaa atgtgatgct CD 601 gtacctggtc gtttaaatca aatctctatt ttggtacaac gagaaggagt CD 651 ttactatggt cagtgcagtg agatttgtgg aactaatcat gcctttaCgc CD 701 ctatcgtcgt agaagctgtt Cctaggaaag attatggttc tCgggtatcc CD 751 aatcaattaa tcccccaaac cggggaagct taa FT EDITED CDNA CD 1 atgattgttc taaaatggtt attcTtTaca atttctcctt gtgatgcagc CD 51 ggaaccatgg caattaggat Ttcaagacgc agctacacct ataatgcaag CD 101 gaataataga cttacatcac gatatctttt tcttcctTat tctgattttg CD 151 gttttcgtat tatggatctt ggttcgcgct ttatggcatt tccactataa CD 201 agaaaatgca atcccgcaaa ggattgttca tggaactact atcgagattc CD 251 ttTggaccat ctttcctagt ctcatctTga tgttcattgc tataccatca CD 301 tttgctctct tatacTcaat ggacgaggta gtagtagatc cagccattac CD 351 tatcaaagct attggacatc aatggtattg gacttatgag tattctgact CD 401 ataacagttc cgatgagcag tcactcactt ttgacagtta tatgattcca CD 451 gaagaagatc tagaattggg tcaatTacgt ttattagaag tggacaatag CD 501 agtggttgta ccagccaaaa ctcatctacg tattattgta acatctgctg CD 551 atgtacTtca tagttgggct gtaccttcct Taggtgtcaa atgtgatgct CD 601 gtacctggtc gtttaaatca aatctctatt ttggtacaac gagaaggagt CD 651 ttactatggt cagtgcagtg agatttgtgg aactaatcat gcctttaTgc CD 701 ctatcgtcgt agaagctgtt Tctaggaaag attatggttc tTgggtatcc CD 751 aatcaattaa tcccccaaac cggggaagct taa SQ SEQUENCE 261 AA; MIVLKWLFFT ISPCDAAEPW QLGFQDAATP IMQGIIDLHH DIFFFLILIL VFVLWILVRA LWHFHYKENA IPQRIVHGTT IEILWTIFPS LILMFIAIPS FALLYSMDEV VVDPAITIKA IGHQWYWTYE YSDYNSSDEQ SLTFDSYMIP EEDLELGQLR LLEVDNRVVV PAKTHLRIIV TSADVLHSWA VPSLGVKCDA VPGRLNQISI LVQREGVYYG QCSEICGTNH AFMPIVVEAV SRKDYGSWVS NQLIPQTGEA * // ID AP006444_78 STANDARD; PRT; 248 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : ccmC FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98924.1 FT PROTEIN_NAME : cytochrome c biogenesis ccmC FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 212548 - 213291 FT DIRECTIONS : positive FT EDITING : 35 H(Cat) -> Y(Tat) FT EDITING : 60 A(gCg) -> V(gTg) FT EDITING : 62 R(Cgg) -> W(Tgg) FT EDITING : 111 R(Cgg) -> W(Tgg) FT EDITING : 127 T(acC) -> T(acT) FT EDITING : 132 S(tCg) -> L(tTg) FT EDITING : 134 L(Ctt) -> F(Ttt) FT EDITING : 141 R(Cgt) -> C(Tgt) FT EDITING : 146 P(Cct) -> S(Tct) FT EDITING : 149 P(cCg) -> L(cTg) FT EDITING : 153 S(tCa) -> L(tTa) FT EDITING : 155 R(Cgt) -> C(Tgt) FT EDITING : 156 A(gCt) -> V(gTt) FT EDITING : 158 P(cCg) -> L(cTg) FT EDITING : 166 S(tCt) -> F(tTt) FT EDITING : 174 S(tCg) -> L(tTg) FT EDITING : 183 S(tCt) -> F(tTt) FT EDITING : 190 P(Cct) -> S(Tct) FT EDITING : 192 P(cCc) -> L(cTc) FT EDITING : 203 P(cCc) -> L(cTc) FT EDITING : 205 S(tCa) -> L(tTa) FT EDITING : 206 T(acC) -> T(acT) FT EDITING : 207 R(Cgt) -> C(Tgt) FT EDITING : 208 I(atC) -> I(atT) FT EDITING : 217 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 744 NT; CD 1 atgtccgttc cgttattaca accttctttt ttgatgtcaa agaccagaag CD 51 ctacgcgcaa attctcattg ggtcttggtt gttcttaaca gcgatggcta CD 101 ttCatttaag tcttggggta gcaccactag atcttcaaca aggtggaaat CD 151 tctcgtattc tctatgtaca tgttcctgCg gctCggatga gtattattgt CD 201 ttatatcgcc acggctataa acactttctt gttcctatta acaaaacatc CD 251 ccctttatct tcgctcttcc ggaaccggta tagaaatggg tgcttttttt CD 301 acgttgttta ccttagttac tggggggttt Cggggaagac caatgtgggg CD 351 gaccttttgg gtgtgggatg ctcgtttgac Ctctgtattc atctCgtttC CD 401 ttatttacct gggtgcactg Cgttttcaaa agcttCctgt cgaacCggct CD 451 tctatttCaa ttCgtgCtgg acCgatcgat ataccaataa taaagtCttc CD 501 agtcaactgg tggaatacat Cgcatcaacc tgggagcatt agccgatCtg CD 551 gtacatcaat acatgttCct atgcCcattc caatcttgtc taactttgct CD 601 aacttccCct tctCaacCCg tatCttgttt gttctggaaa cacgtcttcC CD 651 tattccatct tttctcgaat ctcctataac ggaagaaatt gaagctcgag CD 701 aaggaatacc aaaacctagt tcactcgctt gcatccatgg ctga FT EDITED CDNA CD 1 atgtccgttc cgttattaca accttctttt ttgatgtcaa agaccagaag CD 51 ctacgcgcaa attctcattg ggtcttggtt gttcttaaca gcgatggcta CD 101 ttTatttaag tcttggggta gcaccactag atcttcaaca aggtggaaat CD 151 tctcgtattc tctatgtaca tgttcctgTg gctTggatga gtattattgt CD 201 ttatatcgcc acggctataa acactttctt gttcctatta acaaaacatc CD 251 ccctttatct tcgctcttcc ggaaccggta tagaaatggg tgcttttttt CD 301 acgttgttta ccttagttac tggggggttt Tggggaagac caatgtgggg CD 351 gaccttttgg gtgtgggatg ctcgtttgac Ttctgtattc atctTgtttT CD 401 ttatttacct gggtgcactg Tgttttcaaa agcttTctgt cgaacTggct CD 451 tctatttTaa ttTgtgTtgg acTgatcgat ataccaataa taaagtTttc CD 501 agtcaactgg tggaatacat Tgcatcaacc tgggagcatt agccgatTtg CD 551 gtacatcaat acatgttTct atgcTcattc caatcttgtc taactttgct CD 601 aacttccTct tctTaacTTg tatTttgttt gttctggaaa cacgtcttcT CD 651 tattccatct tttctcgaat ctcctataac ggaagaaatt gaagctcgag CD 701 aaggaatacc aaaacctagt tcactcgctt gcatccatgg ctga SQ SEQUENCE 248 AA; MSVPLLQPSF LMSKTRSYAQ ILIGSWLFLT AMAIYLSLGV APLDLQQGGN SRILYVHVPV AWMSIIVYIA TAINTFLFLL TKHPLYLRSS GTGIEMGAFF TLFTLVTGGF WGRPMWGTFW VWDARLTSVF ILFFIYLGAL CFQKLSVELA SILICVGLID IPIIKFSVNW WNTLHQPGSI SRFGTSIHVS MLIPILSNFA NFLFLTCILF VLETRLLIPS FLESPITEEI EAREGIPKPS SLACIHG* // ID AP006444_79 STANDARD; PRT; 363 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : rps4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98926.1 FT PROTEIN_NAME : ribosomal protein S4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 220026 - 221114 FT DIRECTIONS : negative FT EDITING : 9 Q(Caa) -> *(Taa) FT EDITING : 26 S(tCa) -> L(tTa) FT EDITING : 30 R(Cgg) -> W(Tgg) FT EDITING : 59 P(Ccg) -> S(Tcg) FT EDITING : 76 P(Ccc) -> S(Tcc) FT EDITING : 79 H(Cat) -> Y(Tat) FT EDITING : 100 P(cCa) -> L(cTa) FT EDITING : 103 P(cCa) -> L(cTa) FT EDITING : 111 P(cCg) -> L(cTg) FT EDITING : 126 P(cCg) -> L(cTg) FT EDITING : 175 S(tCa) -> L(tTa) FT EDITING : 312 I(atC) -> I(atT) FT EDITING : 319 S(tCg) -> L(tTg) FT EDITING : 323 H(Cat) -> Y(Tat) FT EDITING : 331 S(tCt) -> F(tTt) FT EDITING : 348 P(CCa) -> L(TTa) FT EDITING : 351 P(cCt) -> L(cTt) FT EDITING : 353 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 1089 NT; CD 1 atgtggctgc ttaaaaaact gattCaacga gatatagata tgtccccatt CD 51 aagatttcaa acttgtcgtc tactttCagg aaatgttCgg aacagagaac CD 101 tgacaataat acaacgtcgc attctccgaa gattgaggaa caggaagaga CD 151 tctattaaga agagaaagat ttatCcgaaa aaatatctta ccagttacat CD 201 acaattacaa actacacgaa agttgCccct ttttCatggg gatttaccca CD 251 tcacagagat gcacagagga acaaaacgaa cttcatatat cccttttcCa CD 301 ctcaatcCag aaacaagatt tgacgttatt cCgcttcgtc tccattttct CD 351 tgaaactatt cctcaagcaa ggcagcCgat aagtcatcga agggtttgtg CD 401 tgaataaagg aatggtaagc attactcatt tgaaactttc ccacggtgat CD 451 ataatatctt ttcaagaaaa taacgcgata atacgcggtg aagaaataag CD 501 gagatctttc tataaagaaa tttCagttga aaaaatcata ggcaaattac CD 551 tgcatcaacc gctaagaatg tggagaagaa gcaaaactga atggttccac CD 601 ctactcaaaa ctaagagggg atgccgccta ctactaaaat cccggttttt CD 651 gcaacagttg cgttcttcta tgcaagaaga agacttagaa agaacaaaga CD 701 agtttggatc cgaaaaagta tgcttaggaa gttccttcgc tgagcacaag CD 751 agaatgaaga ggaatttgtt aaaatcccta ttcttatcga agagaaggaa CD 801 ggagaaaaac ctaaatcttc ctactcgaac aatcagtcct atagtttaca CD 851 actcttcttt atctttatat agtaattcga cctattgctt cgcatccccc CD 901 cataagttga ctatgaagag aagaatcaaa aggatCgaac tacctactca CD 951 ttattCggag gttaatCata gaacaccaaa agctgtggta tCttatggac CD 1001 ctaacatagg tcatatccct cacgacataa gattaaaaga tCCaaacctt CD 1051 cCtcttCgga gcagaaacgg acgtggccaa aacatataa FT EDITED CDNA CD 1 atgtggctgc ttaaaaaact gattTaacga gatatagata tgtccccatt CD 51 aagatttcaa acttgtcgtc tactttTagg aaatgttTgg aacagagaac CD 101 tgacaataat acaacgtcgc attctccgaa gattgaggaa caggaagaga CD 151 tctattaaga agagaaagat ttatTcgaaa aaatatctta ccagttacat CD 201 acaattacaa actacacgaa agttgTccct ttttTatggg gatttaccca CD 251 tcacagagat gcacagagga acaaaacgaa cttcatatat cccttttcTa CD 301 ctcaatcTag aaacaagatt tgacgttatt cTgcttcgtc tccattttct CD 351 tgaaactatt cctcaagcaa ggcagcTgat aagtcatcga agggtttgtg CD 401 tgaataaagg aatggtaagc attactcatt tgaaactttc ccacggtgat CD 451 ataatatctt ttcaagaaaa taacgcgata atacgcggtg aagaaataag CD 501 gagatctttc tataaagaaa tttTagttga aaaaatcata ggcaaattac CD 551 tgcatcaacc gctaagaatg tggagaagaa gcaaaactga atggttccac CD 601 ctactcaaaa ctaagagggg atgccgccta ctactaaaat cccggttttt CD 651 gcaacagttg cgttcttcta tgcaagaaga agacttagaa agaacaaaga CD 701 agtttggatc cgaaaaagta tgcttaggaa gttccttcgc tgagcacaag CD 751 agaatgaaga ggaatttgtt aaaatcccta ttcttatcga agagaaggaa CD 801 ggagaaaaac ctaaatcttc ctactcgaac aatcagtcct atagtttaca CD 851 actcttcttt atctttatat agtaattcga cctattgctt cgcatccccc CD 901 cataagttga ctatgaagag aagaatcaaa aggatTgaac tacctactca CD 951 ttattTggag gttaatTata gaacaccaaa agctgtggta tTttatggac CD 1001 ctaacatagg tcatatccct cacgacataa gattaaaaga tTTaaacctt CD 1051 cTtcttTgga gcagaaacgg acgtggccaa aacatataa SQ SEQUENCE 363 AA; MWLLKKLI*R DIDMSPLRFQ TCRLLLGNVW NRELTIIQRR ILRRLRNRKR SIKKRKIYSK KYLTSYIQLQ TTRKLSLFYG DLPITEMHRG TKRTSYIPFL LNLETRFDVI LLRLHFLETI PQARQLISHR RVCVNKGMVS ITHLKLSHGD IISFQENNAI IRGEEIRRSF YKEILVEKII GKLLHQPLRM WRRSKTEWFH LLKTKRGCRL LLKSRFLQQL RSSMQEEDLE RTKKFGSEKV CLGSSFAEHK RMKRNLLKSL FLSKRRKEKN LNLPTRTISP IVYNSSLSLY SNSTYCFASP HKLTMKRRIK RIELPTHYLE VNYRTPKAVV FYGPNIGHIP HDIRLKDLNL LLWSRNGRGQ NI* // ID AP009123_71 STANDARD; PRT; 501 AA. AC AP009123; DT Tue Jul 21 07:03:08 2009 DE Gossypium barbadense chloroplast DNA, complete genome. OS chloroplast Gossypium barbadense (sea-island cotton) OC Gossypium barbadense RN [1] RL Genes Genet. Syst. 81 (5), 311-321 (2006) RL PUBMED 17159292 FT Full length CDS FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF41297.1 FT PROTEIN_NAME : NADH dehydrogenase ND4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 120819 - 122321 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 aCgaattatt ttccttggtt aacaataatt gtatttttac caatatctgc CD 51 aggttcttta cttttctttc ttcctcataa aggaaataag ctaattaagt CD 101 ggtatacaat atgtatatgc attctcgaac tccttctaac aacctatgca CD 151 ttttgttatc atttccgatt ggacgatcca ttaatccagc tggcggaaga CD 201 ttataaatgg ataaattttt ttgattttta ctggagattg ggaatagatg CD 251 gactttctat agggcccatt ttactgacag gatttatcac cactttagcc CD 301 actttggcgg cttggccagt tactcgagat tcgcgattat ttcatttcct CD 351 gatgctagca atgtacagtg gtcaaatagg atcattttct tctcgagacc CD 401 ttttactttt tttcatcatg tgggagttcg aattaattcc cgtttatcta CD 451 cttctatcca tgtggggggg aaagaaacgt ctgtactcgg ctacaaaatt CD 501 tattttgtac accgcagggg gttccgtttt tctattaata ggagttttgg CD 551 gtctcggttt atacggttct aatgaaccaa cattaaattt tgaaacatta CD 601 gctaatcaat catatcctgt cgcactggaa ataatattct atattggatt CD 651 tcttattgct tttgctgtca aatcgccgat tataccctta catacgtggt CD 701 taccggatac ccacggggag gcccattaca gtacttgtat gcttctagcc CD 751 ggaattttat taaaaatggg agcatatgga ttagttcgga tcaatatgga CD 801 attattaccc catgcgcatt ccatattttc tccctggttg ataatagtgg CD 851 gtacaatgca aataatttat gcagcttcaa catctcttgg tcaacggaat CD 901 ttaaaaaaaa gaatagccta ttcctccgta tctcatatgg gtttcataat CD 951 tataggaatt ggttcgataa ctgatacggg actcaacgga gctattttac CD 1001 aaataatatc tcatggcttt atcggtgctg cacttttttt cttggcagga CD 1051 acgagttatg atagaatgcg tcttgtttat ctcgacgaaa tgggcggaat CD 1101 ggccgtttcg attcccaaaa tatttacgat gttcagtatc ttatccatgg CD 1151 cttctcttgc attaccgggc atgagtggtt ttgttgcaga attgatagtc CD 1201 ttttttggaa taattaccag ccaaaaatat tttttaatgc caaaaatact CD 1251 aattactttc gtaatggcaa ttggaatgat attaactcct atttattcat CD 1301 tatctatgtc acgtcaaatg ttctatggat acaagctatt taatgctcca CD 1351 agttcttatt tttttgattc tggaccacga gagttatttg tttcgatctc CD 1401 tatctttcta ccagtaatag gtattggtat ttatccggat ttcgttctct CD 1451 cattatcagg tgagaaagtc gaaactattc tatataatta tttttataga CD 1501 tag FT EDITED CDNA CD 1 aTgaattatt ttccttggtt aacaataatt gtatttttac caatatctgc CD 51 aggttcttta cttttctttc ttcctcataa aggaaataag ctaattaagt CD 101 ggtatacaat atgtatatgc attctcgaac tccttctaac aacctatgca CD 151 ttttgttatc atttccgatt ggacgatcca ttaatccagc tggcggaaga CD 201 ttataaatgg ataaattttt ttgattttta ctggagattg ggaatagatg CD 251 gactttctat agggcccatt ttactgacag gatttatcac cactttagcc CD 301 actttggcgg cttggccagt tactcgagat tcgcgattat ttcatttcct CD 351 gatgctagca atgtacagtg gtcaaatagg atcattttct tctcgagacc CD 401 ttttactttt tttcatcatg tgggagttcg aattaattcc cgtttatcta CD 451 cttctatcca tgtggggggg aaagaaacgt ctgtactcgg ctacaaaatt CD 501 tattttgtac accgcagggg gttccgtttt tctattaata ggagttttgg CD 551 gtctcggttt atacggttct aatgaaccaa cattaaattt tgaaacatta CD 601 gctaatcaat catatcctgt cgcactggaa ataatattct atattggatt CD 651 tcttattgct tttgctgtca aatcgccgat tataccctta catacgtggt CD 701 taccggatac ccacggggag gcccattaca gtacttgtat gcttctagcc CD 751 ggaattttat taaaaatggg agcatatgga ttagttcgga tcaatatgga CD 801 attattaccc catgcgcatt ccatattttc tccctggttg ataatagtgg CD 851 gtacaatgca aataatttat gcagcttcaa catctcttgg tcaacggaat CD 901 ttaaaaaaaa gaatagccta ttcctccgta tctcatatgg gtttcataat CD 951 tataggaatt ggttcgataa ctgatacggg actcaacgga gctattttac CD 1001 aaataatatc tcatggcttt atcggtgctg cacttttttt cttggcagga CD 1051 acgagttatg atagaatgcg tcttgtttat ctcgacgaaa tgggcggaat CD 1101 ggccgtttcg attcccaaaa tatttacgat gttcagtatc ttatccatgg CD 1151 cttctcttgc attaccgggc atgagtggtt ttgttgcaga attgatagtc CD 1201 ttttttggaa taattaccag ccaaaaatat tttttaatgc caaaaatact CD 1251 aattactttc gtaatggcaa ttggaatgat attaactcct atttattcat CD 1301 tatctatgtc acgtcaaatg ttctatggat acaagctatt taatgctcca CD 1351 agttcttatt tttttgattc tggaccacga gagttatttg tttcgatctc CD 1401 tatctttcta ccagtaatag gtattggtat ttatccggat ttcgttctct CD 1451 cattatcagg tgagaaagtc gaaactattc tatataatta tttttataga CD 1501 tag SQ SEQUENCE 501 AA; MNYFPWLTII VFLPISAGSL LFFLPHKGNK LIKWYTICIC ILELLLTTYA FCYHFRLDDP LIQLAEDYKW INFFDFYWRL GIDGLSIGPI LLTGFITTLA TLAAWPVTRD SRLFHFLMLA MYSGQIGSFS SRDLLLFFIM WEFELIPVYL LLSMWGGKKR LYSATKFILY TAGGSVFLLI GVLGLGLYGS NEPTLNFETL ANQSYPVALE IIFYIGFLIA FAVKSPIIPL HTWLPDTHGE AHYSTCMLLA GILLKMGAYG LVRINMELLP HAHSIFSPWL IIVGTMQIIY AASTSLGQRN LKKRIAYSSV SHMGFIIIGI GSITDTGLNG AILQIISHGF IGAALFFLAG TSYDRMRLVY LDEMGGMAVS IPKIFTMFSI LSMASLALPG MSGFVAELIV FFGIITSQKY FLMPKILITF VMAIGMILTP IYSLSMSRQM FYGYKLFNAP SSYFFDSGPR ELFVSISIFL PVIGIGIYPD FVLSLSGEKV ETILYNYFYR * // ID AP009339_55 STANDARD; PRT; 32 AA. AC AP009339; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis chloroplast DNA, complete genome. OS chloroplast Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Phylogenet. Evol. 37 (1), 214-234 (2005) RL PUBMED 16182153 FT Full length CDS FT GENE : petL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF64963.1 FT PROTEIN_NAME : cytochrome b/f complex 3.5 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 70180 - 70275 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 96 NT; CD 1 aCgcctacta taactagcta ttttggcttt ctattggctt ccctaatctt CD 51 caccttagcc ctattcattg gttcaagcaa gatacgactt ctttga FT EDITED CDNA CD 1 aTgcctacta taactagcta ttttggcttt ctattggctt ccctaatctt CD 51 caccttagcc ctattcattg gttcaagcaa gatacgactt ctttga SQ SEQUENCE 32 AA; MPTITSYFGF LLASLIFTLA LFIGSSKIRL L* // ID AP009381_3 STANDARD; PRT; 509 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : atp1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98398.1 FT PROTEIN_NAME : ATPase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 15475 - 17001 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1527 NT; CD 1 aCgaaattat atcctggagc tgcggaaccc actactatat cgggaagaag CD 51 aatcaccaac tattgcacca atttacaagt tgatgggatc ggtcgagtgg CD 101 tcccagttgg ggatgggatt gcacgtgttt atggatcaaa cgagattcaa CD 151 gctggggaaa tggttgaatt cgccagcggt gtgaaaggaa tagcgttgaa CD 201 tcctgagaat gagaatgtag gtattgttgt atctggtagt gataccgcca CD 251 ttaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gtgggaaagg ccatgttagg tcgtgtggtc gatgcgttgg gagtacctat CD 351 tgatggaaaa ggggctttaa gcgatcacga acgaagacgt gtcgaagtga CD 401 aagcccctgg gattattgaa cgtaaatctg tgcacgaacc tatgcaaaca CD 451 gggttgaaag cagtggatag cccggttcct ataggccgtg gtcaacgaga CD 501 accgataatc ggggaccgac agactggaaa aactgctata gctattgata CD 551 ccatatcgaa ccagaagcga atgaactcaa agggcacctc tgatagtgaa CD 601 aaattgtatc gtgtctatgt agcgattgga cagaaacgct caaccgcggc CD 651 acaattagtt caaattcttt caggagcgga tgcttcggaa tatccaatta CD 701 tcgtagcagc caccgcttcg gatcctgctc ctctgcaatt tctggcccca CD 751 tatcctgggt gtgctgcggg agaatatttc cgcgataatg gaatgcacgc CD 801 atcaataatc tatgatgatc ctagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gctacgccga ccaccaggcc gtgaggcttt cccaggggat CD 901 gttctctatt tacattcccg tccatcagaa agagccgcta aacgatcgga CD 951 ccagacaggt gcgggtagct tgaccgcgtt acccgtcatt gaaacacaag CD 1001 ctggagacgt gtcggcctat atccctacca atgtgatccc cattacagat CD 1051 ggacaaatcc gttcggaaac agagctcttt tatcgcggaa tcagacctgc CD 1101 tattaacgtc ggcttatccg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgag acaagtacgt ggtagttcaa aaccagaatt ggcacaatat CD 1201 cgtgaagtgg ccgcctctgc tcaatccggg tcagaccttg atgctgctac CD 1251 tcaggcacca tcaaatagag gtgctaggct tactgaagtt ccgaaacaac CD 1301 cacaatatcc accacttcct attgaaaaac aaattccagt tattcacgca CD 1351 gctgtgaaag ggtttcgtga tcgaatgcca ctagacagaa ttcctcggta CD 1401 tgagagagcc atttcaagta gtatagatcc cgaattacta caatccgttc CD 1451 cggaaaaagg tgagttaact aacgaaataa ggatgaaacc agatgctcct CD 1501 tcaaaagaaa gcgttaacct ttgctga FT EDITED CDNA CD 1 aTgaaattat atcctggagc tgcggaaccc actactatat cgggaagaag CD 51 aatcaccaac tattgcacca atttacaagt tgatgggatc ggtcgagtgg CD 101 tcccagttgg ggatgggatt gcacgtgttt atggatcaaa cgagattcaa CD 151 gctggggaaa tggttgaatt cgccagcggt gtgaaaggaa tagcgttgaa CD 201 tcctgagaat gagaatgtag gtattgttgt atctggtagt gataccgcca CD 251 ttaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gtgggaaagg ccatgttagg tcgtgtggtc gatgcgttgg gagtacctat CD 351 tgatggaaaa ggggctttaa gcgatcacga acgaagacgt gtcgaagtga CD 401 aagcccctgg gattattgaa cgtaaatctg tgcacgaacc tatgcaaaca CD 451 gggttgaaag cagtggatag cccggttcct ataggccgtg gtcaacgaga CD 501 accgataatc ggggaccgac agactggaaa aactgctata gctattgata CD 551 ccatatcgaa ccagaagcga atgaactcaa agggcacctc tgatagtgaa CD 601 aaattgtatc gtgtctatgt agcgattgga cagaaacgct caaccgcggc CD 651 acaattagtt caaattcttt caggagcgga tgcttcggaa tatccaatta CD 701 tcgtagcagc caccgcttcg gatcctgctc ctctgcaatt tctggcccca CD 751 tatcctgggt gtgctgcggg agaatatttc cgcgataatg gaatgcacgc CD 801 atcaataatc tatgatgatc ctagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gctacgccga ccaccaggcc gtgaggcttt cccaggggat CD 901 gttctctatt tacattcccg tccatcagaa agagccgcta aacgatcgga CD 951 ccagacaggt gcgggtagct tgaccgcgtt acccgtcatt gaaacacaag CD 1001 ctggagacgt gtcggcctat atccctacca atgtgatccc cattacagat CD 1051 ggacaaatcc gttcggaaac agagctcttt tatcgcggaa tcagacctgc CD 1101 tattaacgtc ggcttatccg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgag acaagtacgt ggtagttcaa aaccagaatt ggcacaatat CD 1201 cgtgaagtgg ccgcctctgc tcaatccggg tcagaccttg atgctgctac CD 1251 tcaggcacca tcaaatagag gtgctaggct tactgaagtt ccgaaacaac CD 1301 cacaatatcc accacttcct attgaaaaac aaattccagt tattcacgca CD 1351 gctgtgaaag ggtttcgtga tcgaatgcca ctagacagaa ttcctcggta CD 1401 tgagagagcc atttcaagta gtatagatcc cgaattacta caatccgttc CD 1451 cggaaaaagg tgagttaact aacgaaataa ggatgaaacc agatgctcct CD 1501 tcaaaagaaa gcgttaacct ttgctga SQ SEQUENCE 509 AA; MKLYPGAAEP TTISGRRITN YCTNLQVDGI GRVVPVGDGI ARVYGSNEIQ AGEMVEFASG VKGIALNPEN ENVGIVVSGS DTAIKEGDLV KRTGSIVDVP VGKAMLGRVV DALGVPIDGK GALSDHERRR VEVKAPGIIE RKSVHEPMQT GLKAVDSPVP IGRGQREPII GDRQTGKTAI AIDTISNQKR MNSKGTSDSE KLYRVYVAIG QKRSTAAQLV QILSGADASE YPIIVAATAS DPAPLQFLAP YPGCAAGEYF RDNGMHASII YDDPSKQAVA YRQMSLLLRR PPGREAFPGD VLYLHSRPSE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVIPITD GQIRSETELF YRGIRPAINV GLSVSRVGSA AQLKAMRQVR GSSKPELAQY REVAASAQSG SDLDAATQAP SNRGARLTEV PKQPQYPPLP IEKQIPVIHA AVKGFRDRMP LDRIPRYERA ISSSIDPELL QSVPEKGELT NEIRMKPDAP SKESVNLC* // ID AP009381_4 STANDARD; PRT; 126 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : rps12 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98399.1 FT PROTEIN_NAME : ribosomal protein S12 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 26064 - 26441 FT DIRECTIONS : negative FT EDITING : 126 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 378 NT; CD 1 atgcctacat cgaatcaatc gattcgtcat ggtagagaga aaaaacggcg CD 51 cacagaccgt actcgagctt cggataaatg tcctcagaag caaggagtac CD 101 gcccgcgtgt tccgacggga acaccaaaaa aacctaatcc agctccacgt CD 151 aagatagcca aagtacggtt gagcaatcaa catgatatat ttgcttacat CD 201 tccgggcgaa ggtcataatc tgcaggaaca tcctatggtg tcgatcagag CD 251 gaggtagagt gaaagattcg ccaggtgcga aattccatcg tattcgagga CD 301 gtcaaagatt tgctgggaac tccgggtcga aaaaggggca gatctaaata CD 351 tggtgcgaag agacccaaat cgataCga FT EDITED CDNA CD 1 atgcctacat cgaatcaatc gattcgtcat ggtagagaga aaaaacggcg CD 51 cacagaccgt actcgagctt cggataaatg tcctcagaag caaggagtac CD 101 gcccgcgtgt tccgacggga acaccaaaaa aacctaatcc agctccacgt CD 151 aagatagcca aagtacggtt gagcaatcaa catgatatat ttgcttacat CD 201 tccgggcgaa ggtcataatc tgcaggaaca tcctatggtg tcgatcagag CD 251 gaggtagagt gaaagattcg ccaggtgcga aattccatcg tattcgagga CD 301 gtcaaagatt tgctgggaac tccgggtcga aaaaggggca gatctaaata CD 351 tggtgcgaag agacccaaat cgataTga SQ SEQUENCE 126 AA; MPTSNQSIRH GREKKRRTDR TRASDKCPQK QGVRPRVPTG TPKKPNPAPR KIAKVRLSNQ HDIFAYIPGE GHNLQEHPMV SIRGGRVKDS PGAKFHRIRG VKDLLGTPGR KRGRSKYGAK RPKSI* // ID AP009381_6 STANDARD; PRT; 101 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : nad4L FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98401.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 30110 - 30412 FT DIRECTIONS : negative FT EDITING : 101 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atggatcttg tcaaatattt aacatttcct atgatcattt ctctctcagg CD 51 tattcgggga atcttcctga atagacgaaa tattattatt atgtcaatgt CD 101 caattgaatc aatgttacta gctgccaatt cgaacttttt ggtatttccc CD 151 gtttatccgg atgatatgat gggtcaatta tttgcttcat cggtgttaac CD 201 ggtggcagct gcggaatctg ctattgggtc ggccattccg gttattactt CD 251 tccgaattcg agggaccatt gcagtagaat ctattaattg catgaagggt CD 301 Caa FT EDITED CDNA CD 1 atggatcttg tcaaatattt aacatttcct atgatcattt ctctctcagg CD 51 tattcgggga atcttcctga atagacgaaa tattattatt atgtcaatgt CD 101 caattgaatc aatgttacta gctgccaatt cgaacttttt ggtatttccc CD 151 gtttatccgg atgatatgat gggtcaatta tttgcttcat cggtgttaac CD 201 ggtggcagct gcggaatctg ctattgggtc ggccattccg gttattactt CD 251 tccgaattcg agggaccatt gcagtagaat ctattaattg catgaagggt CD 301 Taa SQ SEQUENCE 101 AA; MDLVKYLTFP MIISLSGIRG IFLNRRNIII MSMSIESMLL AANSNFLVFP VYPDDMMGQL FASSVLTVAA AESAIGSAIP VITFRIRGTI AVESINCMKG * // ID AP009381_7 STANDARD; PRT; 256 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98402.1 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 35699 - 36466 FT DIRECTIONS : negative FT EDITING : 256 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 768 NT; CD 1 atgccaaaca gcccacttga gcaatttgcc attatcccat tgattcctat CD 51 ggatatagga aacttgtatt tctcattcac aaatccatct ttgtccatgc CD 101 cgctaactat cagttcagtc ctgcttttag tccatcttgt tactaagaac CD 151 ggagggggaa actcagtacc aaatgcttgg caatccctgg tagagcttat CD 201 ttatgatttc gtgccgaacc cggtgaacga acaaataggt ggtctttccg CD 251 gaaatgttaa acaaaagttt ccccctcgca tctcggtcac ttttacttct CD 301 tcgttatttc gtaatcccca gggtatgata ccatatagct ccacagttac CD 351 aagtcatttc atcattactt tgggtccccc atttccgatt tctattggaa CD 401 ttactatagt gggatctcaa agaaatgggc ttcatttctc cagctcctca CD 451 tcacccgcag gagtaccact gccgttagca cctttctcag tactccttga CD 501 gctaatccct cattgttctc gcgcatcaag ctcaggaata cgtttatttg CD 551 ctaatatgat ggctggtcat agttcagtaa agatctcaag tgggtccgct CD 601 cggactatgc tatgtatgaa taatataatg tatttcatag gagatcttgg CD 651 tccttcatca atagtttttg caccgaccgg ttcggaatta ggtgtagcta CD 701 tatcacaagc tcatgtttct acaatctcaa tttgtactta ctcgaatgat CD 751 gctacaaatc ctcatCga FT EDITED CDNA CD 1 atgccaaaca gcccacttga gcaatttgcc attatcccat tgattcctat CD 51 ggatatagga aacttgtatt tctcattcac aaatccatct ttgtccatgc CD 101 cgctaactat cagttcagtc ctgcttttag tccatcttgt tactaagaac CD 151 ggagggggaa actcagtacc aaatgcttgg caatccctgg tagagcttat CD 201 ttatgatttc gtgccgaacc cggtgaacga acaaataggt ggtctttccg CD 251 gaaatgttaa acaaaagttt ccccctcgca tctcggtcac ttttacttct CD 301 tcgttatttc gtaatcccca gggtatgata ccatatagct ccacagttac CD 351 aagtcatttc atcattactt tgggtccccc atttccgatt tctattggaa CD 401 ttactatagt gggatctcaa agaaatgggc ttcatttctc cagctcctca CD 451 tcacccgcag gagtaccact gccgttagca cctttctcag tactccttga CD 501 gctaatccct cattgttctc gcgcatcaag ctcaggaata cgtttatttg CD 551 ctaatatgat ggctggtcat agttcagtaa agatctcaag tgggtccgct CD 601 cggactatgc tatgtatgaa taatataatg tatttcatag gagatcttgg CD 651 tccttcatca atagtttttg caccgaccgg ttcggaatta ggtgtagcta CD 701 tatcacaagc tcatgtttct acaatctcaa tttgtactta ctcgaatgat CD 751 gctacaaatc ctcatTga SQ SEQUENCE 256 AA; MPNSPLEQFA IIPLIPMDIG NLYFSFTNPS LSMPLTISSV LLLVHLVTKN GGGNSVPNAW QSLVELIYDF VPNPVNEQIG GLSGNVKQKF PPRISVTFTS SLFRNPQGMI PYSSTVTSHF IITLGPPFPI SIGITIVGSQ RNGLHFSSSS SPAGVPLPLA PFSVLLELIP HCSRASSSGI RLFANMMAGH SSVKISSGSA RTMLCMNNIM YFIGDLGPSS IVFAPTGSEL GVAISQAHVS TISICTYSND ATNPH* // ID AP009381_16 STANDARD; PRT; 524 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : cox1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98411.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 153723 - 155294 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1572 NT; CD 1 aCgacaaatt tggtccgatg gccgttcccc accaaccaca gggatatagg CD 51 gactctatat tcaatctttg gtgccattgc tggagtgatg ggcacatgct CD 101 tctcagtacc aattcgtatg gaattggcac aacccggcga tcaaattctt CD 151 ggtggaaatc atcaacttca taatgtgtta ataacggctc acgcttcttt CD 201 aatgatctct tttatggtca tgccggcgat gataggtgga tttggtaatt CD 251 ggttcgttcc gattcttata ggtgcacctg acatggcatt tccacgatta CD 301 aataatatct cattccggtt gctgccacct tcgctgttgc tcctattaag CD 351 ctcagccctg gtagaagtgg gtagcggcac tgggtggacg gtccatccgc CD 401 ccttaagtgg tattaccagt cattctggag gagctgctga ttcagcaatt CD 451 tctagtcttc atttatcagg tgtttcatcc atttcaggtt ctatcaattc CD 501 tataactact atccccaaca tgcgcggacc tggaatgact atgcatagat CD 551 cacccctatt cgtgcggtcc gttccagtga cagcattcct acttctatta CD 601 tcacttccgg taccggcagg ggcaattacc atgttattga ccgatcgaaa CD 651 ctttaataca accttttctg atcctgctgg agggggagac ccgatattat CD 701 accagcatct ctttcggtcc ttcggtcatc cagaggtgca tattcccatt CD 751 ccgcccggat ccggtatcat tagtcatatc gtatcgactt tttcgggaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgatc agtattggtg CD 851 ttcctggatc tcctgttcgg gctcatcata tgtctactgt gggctcagac CD 901 gttgatacgc gtgctcactc taccgcagct accatgatca tagctgtccc CD 951 cactggaatc aaaatctcta gtcggatcgc taccatgtgg ggaggttcga CD 1001 tacgatacaa aacacccatg ttacctgctg tagggtctat ctcttcgtcc CD 1051 accataggag gacccactgg aatagtcccg gcaaattctg ggctagacat CD 1101 tgctccacat gatacttatt atgtggttgc acattcccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ccatttgcag gatctcactc tcgggcgggt CD 1201 aaaatctctg gtcgaacata ccctgaaact ttaggtcaaa tccatttccg CD 1251 gatcacttct ttcggggtta attcgacctt ctttcccatg catttcttgg CD 1301 ggctttcggg tatgccacgt cgcattccag attatccaga tgcttacgct CD 1351 ggatggaatg cccttagcag tttcggccct tatatatccg tagttgggat CD 1401 tcgtcgtttc ttcgtggtcg taacaatcac tttaagcagt ggaaacaaca CD 1451 aaagatgcgc tccaagtccc tgggctgttg aacataatcc aaccacaccg CD 1501 gaatggatgg tacaaagccc tccagctttt catacttctg aagaacttcc CD 1551 agctgtcaag gagaccttgt ga FT EDITED CDNA CD 1 aTgacaaatt tggtccgatg gccgttcccc accaaccaca gggatatagg CD 51 gactctatat tcaatctttg gtgccattgc tggagtgatg ggcacatgct CD 101 tctcagtacc aattcgtatg gaattggcac aacccggcga tcaaattctt CD 151 ggtggaaatc atcaacttca taatgtgtta ataacggctc acgcttcttt CD 201 aatgatctct tttatggtca tgccggcgat gataggtgga tttggtaatt CD 251 ggttcgttcc gattcttata ggtgcacctg acatggcatt tccacgatta CD 301 aataatatct cattccggtt gctgccacct tcgctgttgc tcctattaag CD 351 ctcagccctg gtagaagtgg gtagcggcac tgggtggacg gtccatccgc CD 401 ccttaagtgg tattaccagt cattctggag gagctgctga ttcagcaatt CD 451 tctagtcttc atttatcagg tgtttcatcc atttcaggtt ctatcaattc CD 501 tataactact atccccaaca tgcgcggacc tggaatgact atgcatagat CD 551 cacccctatt cgtgcggtcc gttccagtga cagcattcct acttctatta CD 601 tcacttccgg taccggcagg ggcaattacc atgttattga ccgatcgaaa CD 651 ctttaataca accttttctg atcctgctgg agggggagac ccgatattat CD 701 accagcatct ctttcggtcc ttcggtcatc cagaggtgca tattcccatt CD 751 ccgcccggat ccggtatcat tagtcatatc gtatcgactt tttcgggaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgatc agtattggtg CD 851 ttcctggatc tcctgttcgg gctcatcata tgtctactgt gggctcagac CD 901 gttgatacgc gtgctcactc taccgcagct accatgatca tagctgtccc CD 951 cactggaatc aaaatctcta gtcggatcgc taccatgtgg ggaggttcga CD 1001 tacgatacaa aacacccatg ttacctgctg tagggtctat ctcttcgtcc CD 1051 accataggag gacccactgg aatagtcccg gcaaattctg ggctagacat CD 1101 tgctccacat gatacttatt atgtggttgc acattcccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ccatttgcag gatctcactc tcgggcgggt CD 1201 aaaatctctg gtcgaacata ccctgaaact ttaggtcaaa tccatttccg CD 1251 gatcacttct ttcggggtta attcgacctt ctttcccatg catttcttgg CD 1301 ggctttcggg tatgccacgt cgcattccag attatccaga tgcttacgct CD 1351 ggatggaatg cccttagcag tttcggccct tatatatccg tagttgggat CD 1401 tcgtcgtttc ttcgtggtcg taacaatcac tttaagcagt ggaaacaaca CD 1451 aaagatgcgc tccaagtccc tgggctgttg aacataatcc aaccacaccg CD 1501 gaatggatgg tacaaagccc tccagctttt catacttctg aagaacttcc CD 1551 agctgtcaag gagaccttgt ga SQ SEQUENCE 524 AA; MTNLVRWPFP TNHRDIGTLY SIFGAIAGVM GTCFSVPIRM ELAQPGDQIL GGNHQLHNVL ITAHASLMIS FMVMPAMIGG FGNWFVPILI GAPDMAFPRL NNISFRLLPP SLLLLLSSAL VEVGSGTGWT VHPPLSGITS HSGGAADSAI SSLHLSGVSS ISGSINSITT IPNMRGPGMT MHRSPLFVRS VPVTAFLLLL SLPVPAGAIT MLLTDRNFNT TFSDPAGGGD PILYQHLFRS FGHPEVHIPI PPGSGIISHI VSTFSGKPVF GYLGMVYAMI SIGVPGSPVR AHHMSTVGSD VDTRAHSTAA TMIIAVPTGI KISSRIATMW GGSIRYKTPM LPAVGSISSS TIGGPTGIVP ANSGLDIAPH DTYYVVAHSH YVLSMGAVFA PFAGSHSRAG KISGRTYPET LGQIHFRITS FGVNSTFFPM HFLGLSGMPR RIPDYPDAYA GWNALSSFGP YISVVGIRRF FVVVTITLSS GNNKRCAPSP WAVEHNPTTP EWMVQSPPAF HTSEELPAVK ETL* // ID AP009381_17 STANDARD; PRT; 105 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : rps10 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98412.1 FT PROTEIN_NAME : ribosomal protein S10 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 82/1 FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 315 NT; CD 1 aCgaccgcca agatacgcat agtgatgaaa tcttttgaag agagattaaa CD 51 caatttaggg gggcttccgc gttacacacg caagattgga tcgcctgaag CD 101 aacgagtctt atatacagtg ttacgatcac ctcatattga taaaaagtcc CD 151 agagaacaat ttgaaatgga gatacataaa caattgctgg tcacagaaac CD 201 agaaacgcat gaatcgcgca aaaagttatt tcggttaaaa cgccagcgtc CD 251 tatttggagc tcaatacgaa atcatctttt actacaaaac ccgttcggat CD 301 aaaggcaaac cctag FT EDITED CDNA CD 1 aTgaccgcca agatacgcat agtgatgaaa tcttttgaag agagattaaa CD 51 caatttaggg gggcttccgc gttacacacg caagattgga tcgcctgaag CD 101 aacgagtctt atatacagtg ttacgatcac ctcatattga taaaaagtcc CD 151 agagaacaat ttgaaatgga gatacataaa caattgctgg tcacagaaac CD 201 agaaacgcat gaatcgcgca aaaagttatt tcggttaaaa cgccagcgtc CD 251 tatttggagc tcaatacgaa atcatctttt actacaaaac ccgttcggat CD 301 aaaggcaaac cctag SQ SEQUENCE 105 AA; MTAKIRIVMK SFEERLNNLG GLPRYTRKIG SPEERVLYTV LRSPHIDKKS REQFEMEIHK QLLVTETETH ESRKKLFRLK RQRLFGAQYE IIFYYKTRSD KGKP* // ID AP009381_18 STANDARD; PRT; 496 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : nad4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98413.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 154/2 FT INTRON 326/1 FT INTRON 467/1 FT EDITING : 496 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1488 NT; CD 1 atgtcacaac aatttcgtga atgctattcc aatctaagtg gtcctattcc CD 51 gtgtcccgtg ctaggaagca ttattcctct tttccttcca aattcgagaa CD 101 tgcgactgat acgatctatt ggtctgtgcg cctctcttct tactttttcg CD 151 tacccccctg ttcctcggat acaattcgat tcttctacgg ccaaatccca CD 201 atttgtggaa accattcgat ggcttcctta tggaagcatc aatttgtata CD 251 tgggtataga tggtatccct tcatcctccg tgatattgac cacattttca CD 301 atccctattc gcattttagt aggttggtcc agtatgaaaa gttatgggaa CD 351 ggagtatatt atagcatttc caattcgtga atttccaatg atcgccgtgt CD 401 ttcgcatgcc ggatccttta ctatttcatg ttcttcccga aagcgtgcta CD 451 atccctatgt ttattattat aggggtatgg ggttcgagac aaagaaagat CD 501 caaggcagca catcagtttc tcccatatac ctcactcgga tctgttctta CD 551 tgctactagc tattccgttt attttctccc aaacaggaac caccgattca CD 601 caaatcttat taaccacaga attcagtgag cggcgccaaa tctttccatg CD 651 gattgcttct tccgctcctt tccccgtaaa agtgcctatg gtaccagttc CD 701 atatctggtc acccgaagct catgtagagg cacctacggc tggatccgtc CD 751 atctcggcag gaattccttc gaaattggga acctatgggt ttttgagatt CD 801 ttccataccc atgtttcccg aagcgacgct ttgtctcact ccttccattt CD 851 atactctaag cgcgatcgct actatatata cttccccgac cactccgaga CD 901 caaatcgatc ctaagaagat cattgcctac tccccagtag cccatacgaa CD 951 tttcgtgact attggtatgt ccagtccgaa catacaggga attggaggta CD 1001 gcattccacc gatgtcaagt catggaccgg ttccttcagc cccttttcca CD 1051 tgtgttggtg ttccatatga ccgacataag actcgacctg ctaaatatta CD 1101 tggaggttca gtaagcacca tgccaaatcc ctctaccatt ttcttctttt CD 1151 ccactttagc caatatgggt ttacctggta ctagcagctc tatcggggaa CD 1201 tttcccatct tagtaggagc tttccaaaga aatggcttag tagccacatc CD 1251 agcagcgctt gggatgattt caggcgcagc gtatccccct tggccatata CD 1301 atcgtgcggt tcttggaaat tcaaaaccca atttccccca taaatcctcc CD 1351 gatccaaatg gaagagaagt tccgatatct ccacctctta ctgttggagt CD 1401 tgttcggatg ggtgttcacc ccaaggtgtt cccggaccgt atgcataccc CD 1451 ccgtaagtaa ctcagtgcaa catggcaaat tccatCga FT EDITED CDNA CD 1 atgtcacaac aatttcgtga atgctattcc aatctaagtg gtcctattcc CD 51 gtgtcccgtg ctaggaagca ttattcctct tttccttcca aattcgagaa CD 101 tgcgactgat acgatctatt ggtctgtgcg cctctcttct tactttttcg CD 151 tacccccctg ttcctcggat acaattcgat tcttctacgg ccaaatccca CD 201 atttgtggaa accattcgat ggcttcctta tggaagcatc aatttgtata CD 251 tgggtataga tggtatccct tcatcctccg tgatattgac cacattttca CD 301 atccctattc gcattttagt aggttggtcc agtatgaaaa gttatgggaa CD 351 ggagtatatt atagcatttc caattcgtga atttccaatg atcgccgtgt CD 401 ttcgcatgcc ggatccttta ctatttcatg ttcttcccga aagcgtgcta CD 451 atccctatgt ttattattat aggggtatgg ggttcgagac aaagaaagat CD 501 caaggcagca catcagtttc tcccatatac ctcactcgga tctgttctta CD 551 tgctactagc tattccgttt attttctccc aaacaggaac caccgattca CD 601 caaatcttat taaccacaga attcagtgag cggcgccaaa tctttccatg CD 651 gattgcttct tccgctcctt tccccgtaaa agtgcctatg gtaccagttc CD 701 atatctggtc acccgaagct catgtagagg cacctacggc tggatccgtc CD 751 atctcggcag gaattccttc gaaattggga acctatgggt ttttgagatt CD 801 ttccataccc atgtttcccg aagcgacgct ttgtctcact ccttccattt CD 851 atactctaag cgcgatcgct actatatata cttccccgac cactccgaga CD 901 caaatcgatc ctaagaagat cattgcctac tccccagtag cccatacgaa CD 951 tttcgtgact attggtatgt ccagtccgaa catacaggga attggaggta CD 1001 gcattccacc gatgtcaagt catggaccgg ttccttcagc cccttttcca CD 1051 tgtgttggtg ttccatatga ccgacataag actcgacctg ctaaatatta CD 1101 tggaggttca gtaagcacca tgccaaatcc ctctaccatt ttcttctttt CD 1151 ccactttagc caatatgggt ttacctggta ctagcagctc tatcggggaa CD 1201 tttcccatct tagtaggagc tttccaaaga aatggcttag tagccacatc CD 1251 agcagcgctt gggatgattt caggcgcagc gtatccccct tggccatata CD 1301 atcgtgcggt tcttggaaat tcaaaaccca atttccccca taaatcctcc CD 1351 gatccaaatg gaagagaagt tccgatatct ccacctctta ctgttggagt CD 1401 tgttcggatg ggtgttcacc ccaaggtgtt cccggaccgt atgcataccc CD 1451 ccgtaagtaa ctcagtgcaa catggcaaat tccatTga SQ SEQUENCE 496 AA; MSQQFRECYS NLSGPIPCPV LGSIIPLFLP NSRMRLIRSI GLCASLLTFS YPPVPRIQFD SSTAKSQFVE TIRWLPYGSI NLYMGIDGIP SSSVILTTFS IPIRILVGWS SMKSYGKEYI IAFPIREFPM IAVFRMPDPL LFHVLPESVL IPMFIIIGVW GSRQRKIKAA HQFLPYTSLG SVLMLLAIPF IFSQTGTTDS QILLTTEFSE RRQIFPWIAS SAPFPVKVPM VPVHIWSPEA HVEAPTAGSV ISAGIPSKLG TYGFLRFSIP MFPEATLCLT PSIYTLSAIA TIYTSPTTPR QIDPKKIIAY SPVAHTNFVT IGMSSPNIQG IGGSIPPMSS HGPVPSAPFP CVGVPYDRHK TRPAKYYGGS VSTMPNPSTI FFFSTLANMG LPGTSSSIGE FPILVGAFQR NGLVATSAAL GMISGAAYPP WPYNRAVLGN SKPNFPHKSS DPNGREVPIS PPLTVGVVRM GVHPKVFPDR MHTPVSNSVQ HGKFH* // ID AP009381_21 STANDARD; PRT; 478 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : rpl2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98416.1 FT PROTEIN_NAME : ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 249/2 FT EDITING : 478 Q(Cag) -> *(Tag) FT CODON_START : 1 CL CDNALEN 1434 NT; CD 1 atgagaaaga gttgcctact attttctaaa gcacttagac aattcacttt CD 51 tggtacagag aagtccgctg ggagaaatcc atcggggcgt actacggttt CD 101 ttcaccgagg gggtggatcg aagcgattgc agcgaagaat tgattcgaaa CD 151 cgaagcactt cgtctatggg cattgtagaa aggatcgaat atgacccaaa CD 201 tcgttcctct cggattgctc tagtacgatg gatcgaaggg gtgctgctac CD 251 gccgccagag gaggacttgc tgcaacacga gagaagagtt cgctccgccg CD 301 cgtgagatcc tcgaacctac tacggccacc atcggcggcc tattctcgtt CD 351 ctcctccctg cccgggaaag tggatgagat aaaggacgtt ctcttatctg CD 401 ccccctcctc tccaagggcc aagagagagg ctgcaacttc cccttcctcc CD 451 ggtagctctt tgggtttacc aaggatagcg gtagctgggg caaagcccgc CD 501 tttattcgct ccgcgaatga gagaagaact cagaggaaaa aagacgttct CD 551 ctctctgcga ggtccgaagg tggagaacgc atagcgttct ctgggcgcat CD 601 aggatcaaac gtaaagcagc gctttcttgg cagagttatt ggcggcaaga CD 651 gactttaggg cttgctgaag ctgctgagca taacggatca aggccgaagg CD 701 cggatcaagc gagggatgga gcgtgcaaag tcgatcgtgc acctgtcact CD 751 tatatatcag ctggtcatca atcgggagca ggcaagatgg tgatgaattg CD 801 cgattggtcc aaaccttcga cctcgttcaa cggcggcggc taccatcaac CD 851 ctgcccatgc cccaaacctt cggttccaag accttgttcg cacagcgaat CD 901 gaaggccggg tggaagggcg ggggggcagt cagcaggctg cttcttggcc CD 951 acgcccccag tacgccgctt atagatgcga catactcgat ccgtattctc CD 1001 aagtaggaga ttgcatacca tcagccaata tacgtacagg aacatgggca CD 1051 cataatactg aatgtgatcc aggtcaaggc gcaaagccga ctcgagctgc CD 1101 aggaaccttt gctgaaataa tgaagaaacc tgggaatgca ccacaatgtc CD 1151 ttgtgcggtc acctccgggt gttgaaaaac tcatagatcc ccgatgccga CD 1201 gccactattg gtatagttcc caatcccaac catggtgcac gtaagcttgg CD 1251 aagagcagga caaagccggt ggttaggcag acgccccatt gctcggggtg CD 1301 ttgctatgaa tccagtggat catcctcatg gaggaggtga aggacgcacg CD 1351 aaaggaggta gaccttcggt gtcaccttgg ggagagccca ccaaagctgg CD 1401 atctcgaaca gtagtgggga aacgcagaaa tCag FT EDITED CDNA CD 1 atgagaaaga gttgcctact attttctaaa gcacttagac aattcacttt CD 51 tggtacagag aagtccgctg ggagaaatcc atcggggcgt actacggttt CD 101 ttcaccgagg gggtggatcg aagcgattgc agcgaagaat tgattcgaaa CD 151 cgaagcactt cgtctatggg cattgtagaa aggatcgaat atgacccaaa CD 201 tcgttcctct cggattgctc tagtacgatg gatcgaaggg gtgctgctac CD 251 gccgccagag gaggacttgc tgcaacacga gagaagagtt cgctccgccg CD 301 cgtgagatcc tcgaacctac tacggccacc atcggcggcc tattctcgtt CD 351 ctcctccctg cccgggaaag tggatgagat aaaggacgtt ctcttatctg CD 401 ccccctcctc tccaagggcc aagagagagg ctgcaacttc cccttcctcc CD 451 ggtagctctt tgggtttacc aaggatagcg gtagctgggg caaagcccgc CD 501 tttattcgct ccgcgaatga gagaagaact cagaggaaaa aagacgttct CD 551 ctctctgcga ggtccgaagg tggagaacgc atagcgttct ctgggcgcat CD 601 aggatcaaac gtaaagcagc gctttcttgg cagagttatt ggcggcaaga CD 651 gactttaggg cttgctgaag ctgctgagca taacggatca aggccgaagg CD 701 cggatcaagc gagggatgga gcgtgcaaag tcgatcgtgc acctgtcact CD 751 tatatatcag ctggtcatca atcgggagca ggcaagatgg tgatgaattg CD 801 cgattggtcc aaaccttcga cctcgttcaa cggcggcggc taccatcaac CD 851 ctgcccatgc cccaaacctt cggttccaag accttgttcg cacagcgaat CD 901 gaaggccggg tggaagggcg ggggggcagt cagcaggctg cttcttggcc CD 951 acgcccccag tacgccgctt atagatgcga catactcgat ccgtattctc CD 1001 aagtaggaga ttgcatacca tcagccaata tacgtacagg aacatgggca CD 1051 cataatactg aatgtgatcc aggtcaaggc gcaaagccga ctcgagctgc CD 1101 aggaaccttt gctgaaataa tgaagaaacc tgggaatgca ccacaatgtc CD 1151 ttgtgcggtc acctccgggt gttgaaaaac tcatagatcc ccgatgccga CD 1201 gccactattg gtatagttcc caatcccaac catggtgcac gtaagcttgg CD 1251 aagagcagga caaagccggt ggttaggcag acgccccatt gctcggggtg CD 1301 ttgctatgaa tccagtggat catcctcatg gaggaggtga aggacgcacg CD 1351 aaaggaggta gaccttcggt gtcaccttgg ggagagccca ccaaagctgg CD 1401 atctcgaaca gtagtgggga aacgcagaaa tTag SQ SEQUENCE 478 AA; MRKSCLLFSK ALRQFTFGTE KSAGRNPSGR TTVFHRGGGS KRLQRRIDSK RSTSSMGIVE RIEYDPNRSS RIALVRWIEG VLLRRQRRTC CNTREEFAPP REILEPTTAT IGGLFSFSSL PGKVDEIKDV LLSAPSSPRA KREAATSPSS GSSLGLPRIA VAGAKPALFA PRMREELRGK KTFSLCEVRR WRTHSVLWAH RIKRKAALSW QSYWRQETLG LAEAAEHNGS RPKADQARDG ACKVDRAPVT YISAGHQSGA GKMVMNCDWS KPSTSFNGGG YHQPAHAPNL RFQDLVRTAN EGRVEGRGGS QQAASWPRPQ YAAYRCDILD PYSQVGDCIP SANIRTGTWA HNTECDPGQG AKPTRAAGTF AEIMKKPGNA PQCLVRSPPG VEKLIDPRCR ATIGIVPNPN HGARKLGRAG QSRWLGRRPI ARGVAMNPVD HPHGGGEGRT KGGRPSVSPW GEPTKAGSRT VVGKRRN* // ID AP009381_26 STANDARD; PRT; 202 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : nad6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98420.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 225214 - 225819 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 202 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 606 NT; CD 1 aCgatacttt ctgtttcgtc gagccctgct ttggtccctg gtttgatggt CD 51 tgtacgtgct gaaaatccag tacatcccgt ttcgttcccc atcccagtgt CD 101 ttcgcaacac ttcaggttta cttattttgt caggtcctga cctctctgct CD 151 atgatctccc cagtagttca tataggagct attgccgttc tattctcatc CD 201 cgtggttatg atgttaaata ttcaaatagc agagattcac gaaaaagtat CD 251 cgcgctattc accagtgagt ggtcttattg gaccgatcct tcggtgggaa CD 301 atgttcctca tcctagataa tgatcacatt ccatcattac cgacctacat CD 351 aggtacaacc tctctgagat atacagttca tgctggagag atacaaagtt CD 401 ggactaattc ggaaacattg ggcaatttac ttcataccta ctattccgtt CD 451 cggttcctgg tttctagtcc tgttccatta gtagccatga ttggggctat CD 501 agtactgact atgcatagga ctactaaggt gaagagacag gatgtattcc CD 551 gacgaaatgc tattgattct aggaggacca taatgaggag gacgacggac CD 601 caaCaa FT EDITED CDNA CD 1 aTgatacttt ctgtttcgtc gagccctgct ttggtccctg gtttgatggt CD 51 tgtacgtgct gaaaatccag tacatcccgt ttcgttcccc atcccagtgt CD 101 ttcgcaacac ttcaggttta cttattttgt caggtcctga cctctctgct CD 151 atgatctccc cagtagttca tataggagct attgccgttc tattctcatc CD 201 cgtggttatg atgttaaata ttcaaatagc agagattcac gaaaaagtat CD 251 cgcgctattc accagtgagt ggtcttattg gaccgatcct tcggtgggaa CD 301 atgttcctca tcctagataa tgatcacatt ccatcattac cgacctacat CD 351 aggtacaacc tctctgagat atacagttca tgctggagag atacaaagtt CD 401 ggactaattc ggaaacattg ggcaatttac ttcataccta ctattccgtt CD 451 cggttcctgg tttctagtcc tgttccatta gtagccatga ttggggctat CD 501 agtactgact atgcatagga ctactaaggt gaagagacag gatgtattcc CD 551 gacgaaatgc tattgattct aggaggacca taatgaggag gacgacggac CD 601 caaTaa SQ SEQUENCE 202 AA; MILSVSSSPA LVPGLMVVRA ENPVHPVSFP IPVFRNTSGL LILSGPDLSA MISPVVHIGA IAVLFSSVVM MLNIQIAEIH EKVSRYSPVS GLIGPILRWE MFLILDNDHI PSLPTYIGTT SLRYTVHAGE IQSWTNSETL GNLLHTYYSV RFLVSSPVPL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDS RRTIMRRTTD Q* // ID AP009381_27 STANDARD; PRT; 194 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : rps11 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98421.1 FT PROTEIN_NAME : ribosomal protein S11 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 226408 - 226989 FT DIRECTIONS : negative FT EDITING : 194 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 582 NT; CD 1 atgagtggga gcgctacgaa gagcgaaaag agttgtttat caacacttct CD 51 aattaatatg atgattcaac cccttaaaga gcacttggaa aaaacgacgg CD 101 ccgagcagga tcacgtagag caacaagtta ttgcggacag gagtttaaaa CD 151 tccatgaact ttgtacaaag cgtcccggag gaatatgagc gatcggagcg CD 201 gcaaagagat agggagaaaa acaaagattt cgtccattcc ccactgatcc CD 251 acaataatac ctctgttacc gtgacggatg ataaggggaa taaaaaaact CD 301 ggggcccccg caggtcgttt ggaggagatt caaggggggt ctcgtcgctc CD 351 aaccaagtat gctgctgaag caactgcaga acatgtcggg cgatccgcca CD 401 aaaatctagg gatgaagtcg gttgtagtgg aagcgaaagg atctacttat CD 451 tccgggaaaa agaaagcagt gatcccgagc cctcgaaaag gagtaggaag CD 501 aaaatctcta attatgcaca ttcacgatgt aacccaactt tcacataatg CD 551 gatgccgact ccccaggaaa cgtcgtgttC aa FT EDITED CDNA CD 1 atgagtggga gcgctacgaa gagcgaaaag agttgtttat caacacttct CD 51 aattaatatg atgattcaac cccttaaaga gcacttggaa aaaacgacgg CD 101 ccgagcagga tcacgtagag caacaagtta ttgcggacag gagtttaaaa CD 151 tccatgaact ttgtacaaag cgtcccggag gaatatgagc gatcggagcg CD 201 gcaaagagat agggagaaaa acaaagattt cgtccattcc ccactgatcc CD 251 acaataatac ctctgttacc gtgacggatg ataaggggaa taaaaaaact CD 301 ggggcccccg caggtcgttt ggaggagatt caaggggggt ctcgtcgctc CD 351 aaccaagtat gctgctgaag caactgcaga acatgtcggg cgatccgcca CD 401 aaaatctagg gatgaagtcg gttgtagtgg aagcgaaagg atctacttat CD 451 tccgggaaaa agaaagcagt gatcccgagc cctcgaaaag gagtaggaag CD 501 aaaatctcta attatgcaca ttcacgatgt aacccaactt tcacataatg CD 551 gatgccgact ccccaggaaa cgtcgtgttT aa SQ SEQUENCE 194 AA; MSGSATKSEK SCLSTLLINM MIQPLKEHLE KTTAEQDHVE QQVIADRSLK SMNFVQSVPE EYERSERQRD REKNKDFVHS PLIHNNTSVT VTDDKGNKKT GAPAGRLEEI QGGSRRSTKY AAEATAEHVG RSAKNLGMKS VVVEAKGSTY SGKKKAVIPS PRKGVGRKSL IMHIHDVTQL SHNGCRLPRK RRV* // ID AP009381_28 STANDARD; PRT; 134 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : sdh3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98422.1 FT PROTEIN_NAME : succinate dehydrogenase cytochrome subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 240289 - 240690 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 402 NT; CD 1 aCgaacatca atcgaccgtt accacctcat cctactattc ataagccaca CD 51 gcttactccg acgtttccaa ttccccatag aatacccggg gccttcttag CD 101 ccactatggt tttgttcagt cctccttttc gtccggaaat aggtcttatt CD 151 agctccactt atgggaatct ttaccaatct tctttttccg tcaatttccc CD 201 gaagttcatt ctaggcttag tcaatcctac tccattagcg ccgcgctatc CD 251 atatgagtaa tggagttcgt catttacggt gggatttggg tttttctcca CD 301 gaattctctc caataattcg gatttccgaa tttcccgcgt tatgtgtagc CD 351 ttttccagct ctcggaaaga ttatccgaag aatctattgt cgatcgcgct CD 401 ag FT EDITED CDNA CD 1 aTgaacatca atcgaccgtt accacctcat cctactattc ataagccaca CD 51 gcttactccg acgtttccaa ttccccatag aatacccggg gccttcttag CD 101 ccactatggt tttgttcagt cctccttttc gtccggaaat aggtcttatt CD 151 agctccactt atgggaatct ttaccaatct tctttttccg tcaatttccc CD 201 gaagttcatt ctaggcttag tcaatcctac tccattagcg ccgcgctatc CD 251 atatgagtaa tggagttcgt catttacggt gggatttggg tttttctcca CD 301 gaattctctc caataattcg gatttccgaa tttcccgcgt tatgtgtagc CD 351 ttttccagct ctcggaaaga ttatccgaag aatctattgt cgatcgcgct CD 401 ag SQ SEQUENCE 134 AA; MNINRPLPPH PTIHKPQLTP TFPIPHRIPG AFLATMVLFS PPFRPEIGLI SSTYGNLYQS SFSVNFPKFI LGLVNPTPLA PRYHMSNGVR HLRWDLGFSP EFSPIIRISE FPALCVAFPA LGKIIRRIYC RSR* // ID AP009381_29 STANDARD; PRT; 464 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : ccmFC FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98423.1 FT PROTEIN_NAME : cytochrome c biogenesis FC FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 273/2 FT EDITING : 464 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1392 NT; CD 1 atggtccaac cacagaactt cttctttttc attactttca tggtcgtgcc CD 51 tcgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccacagg tgctccttct cccagtggta ctctaattcc tattcctata CD 151 tcttcattac cttttctagt ccatctgcat tccagggaat tcatacgctc CD 201 tatggacgaa gcgaaaagta tagtgctggt tggagcaagc cgccctatcc CD 251 tattaccaga cataattggg agaagctcac ccggaactgg agctagaaac CD 301 gcatcattct gtttcgttct cgttcttcat cttattcttc tcggattcgt CD 351 gggagacttg tcatattcag aatctttccg cggtgtgctc cgtttactat CD 401 tatttcgtac ccttttccta ccatataatc atgggcgcga taggttagcg CD 451 aacaaagggc gtgagcgggc gcggagaaga aaacgccaaa cgcttcggcc CD 501 taacgggaat gagcaacgac gaaatgacaa gataaggtgc cccgggagct CD 551 cgtgcccccc cccacccccc catttagaaa gaaggggcga aggttttggg CD 601 cctgtagctt cccccgtccc cccttcgtcg ggtggtgctt gtgggggggg CD 651 tgtgccaccc gaggcagaga ttgggtacta tcttgaagcg cgttctctcg CD 701 ccttaccaac gagtcgactg ctgatggctg ttggtcacga ctgctaccga CD 751 aaagctccaa tgaatatgaa tatttcacat ggaggagtgt gcatctttat CD 801 tatgggtgtt attttgtctg acacgaaaaa gatacagttt actcaacgat CD 851 tgcctttggg tcccgaactc catatgggga aggagcgttg ttgtttgcga CD 901 ggttctgatc attcacatgg acccactttt cattccattt gtggtaattc CD 951 gatgatctat aaaccgtccc taacgaaccc attcatgctt gagcatgatg CD 1001 aatcacttcg tgccataatc gacctgttgc caatccactt ttcggcctca CD 1051 tatgggaatg gaaaactgga tcattttctg catcgtgaaa gatcgtggtg CD 1101 gatagagaat cgcgaacata ataattcctg gttgaccatg tccccagaaa CD 1151 aaagatactt tttctccatt caggaaacga cgagcgcgac tgaagttgct CD 1201 atacatacaa atctatttac ggatccatat gctccgattg gaactggaag CD 1251 tttcggaaca ggcggctggt ataccaccat aatggaactg cctcttattt CD 1301 ttcgcattcg gataggattt ctgttggctt cgccgggggg cttgcgtagt CD 1351 ttgttacgtc agctccaaaa ggataagttg cattggaatC ga FT EDITED CDNA CD 1 atggtccaac cacagaactt cttctttttc attactttca tggtcgtgcc CD 51 tcgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccacagg tgctccttct cccagtggta ctctaattcc tattcctata CD 151 tcttcattac cttttctagt ccatctgcat tccagggaat tcatacgctc CD 201 tatggacgaa gcgaaaagta tagtgctggt tggagcaagc cgccctatcc CD 251 tattaccaga cataattggg agaagctcac ccggaactgg agctagaaac CD 301 gcatcattct gtttcgttct cgttcttcat cttattcttc tcggattcgt CD 351 gggagacttg tcatattcag aatctttccg cggtgtgctc cgtttactat CD 401 tatttcgtac ccttttccta ccatataatc atgggcgcga taggttagcg CD 451 aacaaagggc gtgagcgggc gcggagaaga aaacgccaaa cgcttcggcc CD 501 taacgggaat gagcaacgac gaaatgacaa gataaggtgc cccgggagct CD 551 cgtgcccccc cccacccccc catttagaaa gaaggggcga aggttttggg CD 601 cctgtagctt cccccgtccc cccttcgtcg ggtggtgctt gtgggggggg CD 651 tgtgccaccc gaggcagaga ttgggtacta tcttgaagcg cgttctctcg CD 701 ccttaccaac gagtcgactg ctgatggctg ttggtcacga ctgctaccga CD 751 aaagctccaa tgaatatgaa tatttcacat ggaggagtgt gcatctttat CD 801 tatgggtgtt attttgtctg acacgaaaaa gatacagttt actcaacgat CD 851 tgcctttggg tcccgaactc catatgggga aggagcgttg ttgtttgcga CD 901 ggttctgatc attcacatgg acccactttt cattccattt gtggtaattc CD 951 gatgatctat aaaccgtccc taacgaaccc attcatgctt gagcatgatg CD 1001 aatcacttcg tgccataatc gacctgttgc caatccactt ttcggcctca CD 1051 tatgggaatg gaaaactgga tcattttctg catcgtgaaa gatcgtggtg CD 1101 gatagagaat cgcgaacata ataattcctg gttgaccatg tccccagaaa CD 1151 aaagatactt tttctccatt caggaaacga cgagcgcgac tgaagttgct CD 1201 atacatacaa atctatttac ggatccatat gctccgattg gaactggaag CD 1251 tttcggaaca ggcggctggt ataccaccat aatggaactg cctcttattt CD 1301 ttcgcattcg gataggattt ctgttggctt cgccgggggg cttgcgtagt CD 1351 ttgttacgtc agctccaaaa ggataagttg cattggaatT ga SQ SEQUENCE 464 AA; MVQPQNFFFF ITFMVVPRGT AAPVLLKWFV SRDVPTGAPS PSGTLIPIPI SSLPFLVHLH SREFIRSMDE AKSIVLVGAS RPILLPDIIG RSSPGTGARN ASFCFVLVLH LILLGFVGDL SYSESFRGVL RLLLFRTLFL PYNHGRDRLA NKGRERARRR KRQTLRPNGN EQRRNDKIRC PGSSCPPPPP HLERRGEGFG PVASPVPPSS GGACGGGVPP EAEIGYYLEA RSLALPTSRL LMAVGHDCYR KAPMNMNISH GGVCIFIMGV ILSDTKKIQF TQRLPLGPEL HMGKERCCLR GSDHSHGPTF HSICGNSMIY KPSLTNPFML EHDESLRAII DLLPIHFSAS YGNGKLDHFL HRERSWWIEN REHNNSWLTM SPEKRYFFSI QETTSATEVA IHTNLFTDPY APIGTGSFGT GGWYTTIMEL PLIFRIRIGF LLASPGGLRS LLRQLQKDKL HWN* // ID AP009381_31 STANDARD; PRT; 326 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98425.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 129/1 FT INTRON 157/0 FT INTRON 221/0 FT INTRON 240/2 FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 978 NT; CD 1 aCgtacattg ctatttcagc tgaaatacct ggaataatca taccacttcc CD 51 actaggagta gcctttttag tgctggctga acgtaaagta atggctcctg CD 101 tgcaacgtcg aaagggtcct gatgtagttg gatcgttcgg attgttacaa CD 151 cctttagcgg atggttcgaa attggttctg aaagaaccta tttcaccaag CD 201 tagtgctaat ttatttcttt ccagaatggc tccagtggtt acatctatgt CD 251 caagttcggt tgctcgggcc gttgtacctt ttgattatgg tatggtatcg CD 301 ccagattcgg acataggtat acttcatctg tttgccatat cttcgctagg CD 351 tgttcatggg attattacag cgggttggtc tagtaatccg aaatatgctt CD 401 ttccaggagc attacgatct gcagctcaaa tggtctctta cgaagcatct CD 451 attggtccta ttattattac cgtaccaata tgtgtaggtc ctcgtaattt CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtttggt attcccttgt CD 551 tccccgtatt ggttatgttt cttatccctc gtccagcaga aactaatcga CD 601 gctccttctg atctcccaga agcggaagct gaatcagttg cgggctataa CD 651 tgcggaatat tcttcaatgg ggtctgctcc tttctcccca ggggagtatg CD 701 ccaatatgat cttaatgagt agtccatgta cattgctctc tccaggaggt CD 751 cggccgccta tcccagatct tcccatttcc aagaagatcc cgggctcgat CD 801 ctggtttagt atcaaggtga ttttcttccc gtttctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aatcaatggg acctggccgg CD 901 aaagtcttct tgcctctatc actagcttgg gtagtctccg tttctggtgt CD 951 tccagtcacc tttcaatggc tcccttaa FT EDITED CDNA CD 1 aTgtacattg ctatttcagc tgaaatacct ggaataatca taccacttcc CD 51 actaggagta gcctttttag tgctggctga acgtaaagta atggctcctg CD 101 tgcaacgtcg aaagggtcct gatgtagttg gatcgttcgg attgttacaa CD 151 cctttagcgg atggttcgaa attggttctg aaagaaccta tttcaccaag CD 201 tagtgctaat ttatttcttt ccagaatggc tccagtggtt acatctatgt CD 251 caagttcggt tgctcgggcc gttgtacctt ttgattatgg tatggtatcg CD 301 ccagattcgg acataggtat acttcatctg tttgccatat cttcgctagg CD 351 tgttcatggg attattacag cgggttggtc tagtaatccg aaatatgctt CD 401 ttccaggagc attacgatct gcagctcaaa tggtctctta cgaagcatct CD 451 attggtccta ttattattac cgtaccaata tgtgtaggtc ctcgtaattt CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtttggt attcccttgt CD 551 tccccgtatt ggttatgttt cttatccctc gtccagcaga aactaatcga CD 601 gctccttctg atctcccaga agcggaagct gaatcagttg cgggctataa CD 651 tgcggaatat tcttcaatgg ggtctgctcc tttctcccca ggggagtatg CD 701 ccaatatgat cttaatgagt agtccatgta cattgctctc tccaggaggt CD 751 cggccgccta tcccagatct tcccatttcc aagaagatcc cgggctcgat CD 801 ctggtttagt atcaaggtga ttttcttccc gtttctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aatcaatggg acctggccgg CD 901 aaagtcttct tgcctctatc actagcttgg gtagtctccg tttctggtgt CD 951 tccagtcacc tttcaatggc tcccttaa SQ SEQUENCE 326 AA; MYIAISAEIP GIIIPLPLGV AFLVLAERKV MAPVQRRKGP DVVGSFGLLQ PLADGSKLVL KEPISPSSAN LFLSRMAPVV TSMSSSVARA VVPFDYGMVS PDSDIGILHL FAISSLGVHG IITAGWSSNP KYAFPGALRS AAQMVSYEAS IGPIIITVPI CVGPRNLSEI VMAQKQIWFG IPLFPVLVMF LIPRPAETNR APSDLPEAEA ESVAGYNAEY SSMGSAPFSP GEYANMILMS SPCTLLSPGG RPPIPDLPIS KKIPGSIWFS IKVIFFPFLY IWVRAAFPRY RYDQSMGPGR KVFLPLSLAW VVSVSGVPVT FQWLP* // ID AP009381_32 STANDARD; PRT; 75 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : atp9 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98426.1 FT PROTEIN_NAME : ATPase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 307142 - 307366 FT DIRECTIONS : negative FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgtcggaag gtgcaaaatt aataggtgcc ggagcagcta caattgcttc CD 51 agcgggagct gctgtcggta ttggaaacgt ccttagttcc tcgatccatc CD 101 ccgtggcgcg aaatccatca ttggctaaac aatcatttgg tcatgccatt CD 151 tcggggtttg ctttaaccga agctattgca ttgtttgcct caatgatggc CD 201 gtttttgatc tcatccgtat tcCga FT EDITED CDNA CD 1 atgtcggaag gtgcaaaatt aataggtgcc ggagcagcta caattgcttc CD 51 agcgggagct gctgtcggta ttggaaacgt ccttagttcc tcgatccatc CD 101 ccgtggcgcg aaatccatca ttggctaaac aatcatttgg tcatgccatt CD 151 tcggggtttg ctttaaccga agctattgca ttgtttgcct caatgatggc CD 201 gtttttgatc tcatccgtat tcTga SQ SEQUENCE 75 AA; MSEGAKLIGA GAATIASAGA AVGIGNVLSS SIHPVARNPS LAKQSFGHAI SGFALTEAIA LFASMMAFLI SSVF* // ID AP009381_33 STANDARD; PRT; 198 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : atp4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98427.1 FT PROTEIN_NAME : ATPase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 309093 - 309686 FT DIRECTIONS : negative FT EDITING : 198 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 594 NT; CD 1 atgatattta gttccacgaa taggaaggag agaaatatgc tatttgctgc CD 51 tattctattt attcgtgtat taagctcgaa gaagatctca atatataatg CD 101 aagaaatgat agtagcttgt cgttttatag gctttatcat atccagtcag CD 151 aagagttcgg gtaatactct caaagcgatt ttcgacggga gaatcggagc CD 201 tattcagaaa gaattgcagc aattccccaa tcccaacgaa gttgtttctc CD 251 cggaatccaa tgaacaacaa caattactta ggatcagctt gcgttcaatt CD 301 acgccagaga ttgtagaatc attaccaaat gagacggcac gctgtgcgcc CD 351 taagtgcgaa aagacagtgc aagctgtgtt atgccgaaac ctaaatgtaa CD 401 agttagcaac acttccaaat gccatttatt cccgtcgcat ccgtcttcgg CD 451 gacgatatag tcacaggttt tcacttctca gtgagtgaaa aatttgtccc CD 501 ctgcaccacc gatacgaaaa aagcttttat cgcagaaccg atccgagaag CD 551 gcttggtggt atcaataacg gtttctcgaa atggagggca tCga FT EDITED CDNA CD 1 atgatattta gttccacgaa taggaaggag agaaatatgc tatttgctgc CD 51 tattctattt attcgtgtat taagctcgaa gaagatctca atatataatg CD 101 aagaaatgat agtagcttgt cgttttatag gctttatcat atccagtcag CD 151 aagagttcgg gtaatactct caaagcgatt ttcgacggga gaatcggagc CD 201 tattcagaaa gaattgcagc aattccccaa tcccaacgaa gttgtttctc CD 251 cggaatccaa tgaacaacaa caattactta ggatcagctt gcgttcaatt CD 301 acgccagaga ttgtagaatc attaccaaat gagacggcac gctgtgcgcc CD 351 taagtgcgaa aagacagtgc aagctgtgtt atgccgaaac ctaaatgtaa CD 401 agttagcaac acttccaaat gccatttatt cccgtcgcat ccgtcttcgg CD 451 gacgatatag tcacaggttt tcacttctca gtgagtgaaa aatttgtccc CD 501 ctgcaccacc gatacgaaaa aagcttttat cgcagaaccg atccgagaag CD 551 gcttggtggt atcaataacg gtttctcgaa atggagggca tTga SQ SEQUENCE 198 AA; MIFSSTNRKE RNMLFAAILF IRVLSSKKIS IYNEEMIVAC RFIGFIISSQ KSSGNTLKAI FDGRIGAIQK ELQQFPNPNE VVSPESNEQQ QLLRISLRSI TPEIVESLPN ETARCAPKCE KTVQAVLCRN LNVKLATLPN AIYSRRIRLR DDIVTGFHFS VSEKFVPCTT DTKKAFIAEP IREGLVVSIT VSRNGGH* // ID AP009381_36 STANDARD; PRT; 163 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : atp8 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98430.1 FT PROTEIN_NAME : ATPase subunit 8 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 345649 - 346137 FT DIRECTIONS : positive FT EDITING : 163 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 489 NT; CD 1 atgattcctc aaccggataa attcacttat tccacacaat tcttccggtt CD 51 atgcctgatc ttcttcactt cttatattcc cccatgcaat gatggagtac CD 101 ttaggatcag cagaattccc aaaccacgga accaactggt tccgcaccaa CD 151 cgaaggggga acaacatccg gagcaacgac cccaacagtt tggaagagat CD 201 ttcgagaaaa ggttttagca ccggtgtatc ccatatgtac tctagttcat CD 251 tcgaagtatc ccaatggtgt aacgccgtcg acttattggg gaaaaggaag CD 301 agaatcactt atatatcctg tttcggagaa ataagtggct cacgaggaat CD 351 ggaaaggaac attctatatc tgatttcgaa gtatccatat agcacttatt CD 401 ccaatcctat atctggatgg aggattcctt gtaggaatga cataatgctg CD 451 atccatgttt tacacggcca ggtaaacatc gtttgtCaa FT EDITED CDNA CD 1 atgattcctc aaccggataa attcacttat tccacacaat tcttccggtt CD 51 atgcctgatc ttcttcactt cttatattcc cccatgcaat gatggagtac CD 101 ttaggatcag cagaattccc aaaccacgga accaactggt tccgcaccaa CD 151 cgaaggggga acaacatccg gagcaacgac cccaacagtt tggaagagat CD 201 ttcgagaaaa ggttttagca ccggtgtatc ccatatgtac tctagttcat CD 251 tcgaagtatc ccaatggtgt aacgccgtcg acttattggg gaaaaggaag CD 301 agaatcactt atatatcctg tttcggagaa ataagtggct cacgaggaat CD 351 ggaaaggaac attctatatc tgatttcgaa gtatccatat agcacttatt CD 401 ccaatcctat atctggatgg aggattcctt gtaggaatga cataatgctg CD 451 atccatgttt tacacggcca ggtaaacatc gtttgtTaa SQ SEQUENCE 163 AA; MIPQPDKFTY STQFFRLCLI FFTSYIPPCN DGVLRISRIP KPRNQLVPHQ RRGNNIRSND PNSLEEISRK GFSTGVSHMY SSSFEVSQWC NAVDLLGKRK RITYISCFGE ISGSRGMERN ILYLISKYPY STYSNPISGW RIPCRNDIML IHVLHGQVNI VC* // ID AP009381_37 STANDARD; PRT; 705 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT C-terminal not determined FT GENE : matR FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98432.1 FT PROTEIN_NAME : maturase-related protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 362745 - 364859 FT DIRECTIONS : negative FT EDITING : 705 Q(Cag) -> *(Tag) FT CODON_START : 1 CL CDNALEN 2115 NT; CD 1 gggttgaagt ccagaccgct cacagtagta gtaccgatag aaaagatcat CD 51 taaagaggcg ataagagcgg tacccgaatc catttacgat cccgagtttc CD 101 cggacacatc gcacttccgc ccgggtcgag gctgccactc ggccctaata CD 151 cggataaaaa aagagcgggg aacctctcgt tggttcttgg aattcggcat CD 201 cctaaagtgt tttcacacca tcgaccggca tcgactcatc tcaatcttta CD 251 aggaagagat cgacgatccc aagttctttt accccactca taaactgctt CD 301 tccgccggac gacttgtagg aggtgagaag ggtggccgcc cttcctccgt CD 351 cccacacagt gtactactat cggccctacc aggcaacatc tacccacaca CD 401 agctcgatca ggagatggag aggatccgac agaagcacga aattccgatt CD 451 gttcagataa tcaaattggt tccattaaag acaggtcgta ttgatgacca CD 501 agaaaactct ggagaagaag caagcttcaa ctctcccgga gacaacagag CD 551 ccatcgttgt ggggagggta aaaagcatcc agcgcaaagc ggcgttttat CD 601 tcccttgttt tgtcgtggca cacccccccc acaagcaccc cccgacgaag CD 651 gggagaccag aaaacgcctt tagttttccc cccttcgtcg gggggccccc CD 701 ttgccgcctt ctctaacaag ccctcgagcc tcctttgcgc cgccttcctc CD 751 attcgtaaag aagccgccgg gttgaccccg gaacgaagaa aggccgaagg CD 801 tagagaacgc cctttatcta ataagaagaa gaacagggta gcgttctcca CD 851 tgaaagaccc tattaagtat tgcaagagaa ggggcctgct gatagagctg CD 901 ggcggggagg cgataccagt tatcaggtta gaaagacgcc tagcccgtaa CD 951 gcaggggcta tcccccgttc acttaaatga cctatactta atcaggattt CD 1001 gttacgcgcg atatgccgac gacttaccac tgggaatcgt gggtaccgta CD 1051 gagcttataa gaggaatcca aaaacgtatc acccacttcc tacaatccgg CD 1101 cccgaacctt gaggtaggct ctgcaagatc aacttacata gctgcacgga CD 1151 gtacggtaga atcccccggt acggtcattc gggaagtccc ttcggggacg CD 1201 actcccatac aattattgcg agagctggag aagcgtcgga gagtaaagca CD 1251 ccgtatccat ctcacagctc cccacctacg ctccgccatc cattccgagt CD 1301 tagaggacct agggaggagt atcctgatcc aacagctgac gagggggatg CD 1351 agcggaacag ggagtctaca ggacgcggtt caactggcgg agactcttgg CD 1401 aacagctgga gtaagaagtc cccgagtgag cgcgagcgta ttatgggaga CD 1451 ccgtcaagca catccggcaa ggatcaaggg aaatcttgtt gttgcatagc CD 1501 ccaggtcgga gcaacgtgcc atcagacgtt caacaggcag tctcacgatc CD 1551 gggcaaatcg ttgagcgtct ggaagttgtc attgcatact cccagagaag CD 1601 cgctgggagg tcggaaggcg gcgggggaag gagggggaca ctgggaacag CD 1651 acgggatctt tcagcagcaa attacccata cagataaagg cgcctatgaa CD 1701 aaagatactc caaaggcttc gggatcgagg tatcattagc cggagaagac CD 1751 cctggccaac ccacgtggcc tgcttgacga acgtcagcga cgaagacatc CD 1801 gtaaatcggt tcgcgggcgt cgcgataagt cctctgtccc accataggtg CD 1851 ctgcgacaac ctctatcaag tccgaacgat tgtcgactac cagatccgct CD 1901 ggtccgctgt attcacccct gcccacaagc acaaatcctc ggcgcggaag CD 1951 ataatcccaa agtactccaa agactcacat atagtcaata aagaaggtgg CD 2001 taagacccct gccgagttcc ccaacagcat agagcttagg aagctcggac CD 2051 cagagtcatt ccttacaagt caagatctga acaacaagga gcacgcgtac CD 2101 aagaccttat atCag FT EDITED CDNA CD 1 gggttgaagt ccagaccgct cacagtagta gtaccgatag aaaagatcat CD 51 taaagaggcg ataagagcgg tacccgaatc catttacgat cccgagtttc CD 101 cggacacatc gcacttccgc ccgggtcgag gctgccactc ggccctaata CD 151 cggataaaaa aagagcgggg aacctctcgt tggttcttgg aattcggcat CD 201 cctaaagtgt tttcacacca tcgaccggca tcgactcatc tcaatcttta CD 251 aggaagagat cgacgatccc aagttctttt accccactca taaactgctt CD 301 tccgccggac gacttgtagg aggtgagaag ggtggccgcc cttcctccgt CD 351 cccacacagt gtactactat cggccctacc aggcaacatc tacccacaca CD 401 agctcgatca ggagatggag aggatccgac agaagcacga aattccgatt CD 451 gttcagataa tcaaattggt tccattaaag acaggtcgta ttgatgacca CD 501 agaaaactct ggagaagaag caagcttcaa ctctcccgga gacaacagag CD 551 ccatcgttgt ggggagggta aaaagcatcc agcgcaaagc ggcgttttat CD 601 tcccttgttt tgtcgtggca cacccccccc acaagcaccc cccgacgaag CD 651 gggagaccag aaaacgcctt tagttttccc cccttcgtcg gggggccccc CD 701 ttgccgcctt ctctaacaag ccctcgagcc tcctttgcgc cgccttcctc CD 751 attcgtaaag aagccgccgg gttgaccccg gaacgaagaa aggccgaagg CD 801 tagagaacgc cctttatcta ataagaagaa gaacagggta gcgttctcca CD 851 tgaaagaccc tattaagtat tgcaagagaa ggggcctgct gatagagctg CD 901 ggcggggagg cgataccagt tatcaggtta gaaagacgcc tagcccgtaa CD 951 gcaggggcta tcccccgttc acttaaatga cctatactta atcaggattt CD 1001 gttacgcgcg atatgccgac gacttaccac tgggaatcgt gggtaccgta CD 1051 gagcttataa gaggaatcca aaaacgtatc acccacttcc tacaatccgg CD 1101 cccgaacctt gaggtaggct ctgcaagatc aacttacata gctgcacgga CD 1151 gtacggtaga atcccccggt acggtcattc gggaagtccc ttcggggacg CD 1201 actcccatac aattattgcg agagctggag aagcgtcgga gagtaaagca CD 1251 ccgtatccat ctcacagctc cccacctacg ctccgccatc cattccgagt CD 1301 tagaggacct agggaggagt atcctgatcc aacagctgac gagggggatg CD 1351 agcggaacag ggagtctaca ggacgcggtt caactggcgg agactcttgg CD 1401 aacagctgga gtaagaagtc cccgagtgag cgcgagcgta ttatgggaga CD 1451 ccgtcaagca catccggcaa ggatcaaggg aaatcttgtt gttgcatagc CD 1501 ccaggtcgga gcaacgtgcc atcagacgtt caacaggcag tctcacgatc CD 1551 gggcaaatcg ttgagcgtct ggaagttgtc attgcatact cccagagaag CD 1601 cgctgggagg tcggaaggcg gcgggggaag gagggggaca ctgggaacag CD 1651 acgggatctt tcagcagcaa attacccata cagataaagg cgcctatgaa CD 1701 aaagatactc caaaggcttc gggatcgagg tatcattagc cggagaagac CD 1751 cctggccaac ccacgtggcc tgcttgacga acgtcagcga cgaagacatc CD 1801 gtaaatcggt tcgcgggcgt cgcgataagt cctctgtccc accataggtg CD 1851 ctgcgacaac ctctatcaag tccgaacgat tgtcgactac cagatccgct CD 1901 ggtccgctgt attcacccct gcccacaagc acaaatcctc ggcgcggaag CD 1951 ataatcccaa agtactccaa agactcacat atagtcaata aagaaggtgg CD 2001 taagacccct gccgagttcc ccaacagcat agagcttagg aagctcggac CD 2051 cagagtcatt ccttacaagt caagatctga acaacaagga gcacgcgtac CD 2101 aagaccttat atTag SQ SEQUENCE 705 AA; GLKSRPLTVV VPIEKIIKEA IRAVPESIYD PEFPDTSHFR PGRGCHSALI RIKKERGTSR WFLEFGILKC FHTIDRHRLI SIFKEEIDDP KFFYPTHKLL SAGRLVGGEK GGRPSSVPHS VLLSALPGNI YPHKLDQEME RIRQKHEIPI VQIIKLVPLK TGRIDDQENS GEEASFNSPG DNRAIVVGRV KSIQRKAAFY SLVLSWHTPP TSTPRRRGDQ KTPLVFPPSS GGPLAAFSNK PSSLLCAAFL IRKEAAGLTP ERRKAEGRER PLSNKKKNRV AFSMKDPIKY CKRRGLLIEL GGEAIPVIRL ERRLARKQGL SPVHLNDLYL IRICYARYAD DLPLGIVGTV ELIRGIQKRI THFLQSGPNL EVGSARSTYI AARSTVESPG TVIREVPSGT TPIQLLRELE KRRRVKHRIH LTAPHLRSAI HSELEDLGRS ILIQQLTRGM SGTGSLQDAV QLAETLGTAG VRSPRVSASV LWETVKHIRQ GSREILLLHS PGRSNVPSDV QQAVSRSGKS LSVWKLSLHT PREALGGRKA AGEGGGHWEQ TGSFSSKLPI QIKAPMKKIL QRLRDRGIIS RRRPWPTHVA CLTNVSDEDI VNRFAGVAIS PLSHHRCCDN LYQVRTIVDY QIRWSAVFTP AHKHKSSARK IIPKYSKDSH IVNKEGGKTP AEFPNSIELR KLGPESFLTS QDLNNKEHAY KTLY* // ID AP009381_41 STANDARD; PRT; 232 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : rps7 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98435.1 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 392501 - 393196 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 696 NT; CD 1 aCgaacagag gaggtggggg ggaacggaac atttcgcttt tatgcgcgcg CD 51 catattgcat tatatagata gattggccga gaaggatgag cagaagcaat CD 101 tgcgtgatag ggagttggcc gaaaaagatg gacagaaaca attgcataat CD 151 ataaattcat cggcggccgg gggagaggga gggcttttgt caccaaaacc CD 201 taggggccgt agggcgggca catacaatct cttggagatt ttgagctata CD 251 tcgggggatt ggatggtaaa cagaaacaat tgatcaataa gtcagtcaac CD 301 tttcgcacga tcgatggcaa aagaacgaaa gctcgtgcta ttgcttatca CD 351 aacttttcat cgcccagctc gaactgaacg cgatgtgatc aaacttctgg CD 401 ttaatgccgt agagaatata aagcccatat gcgaagcggg aaaagtaaga CD 451 gtcgcaggta ctacttataa tgtacctgag attgtagcca gggatcgtca CD 501 acaaacctta gctattcgtt ggatccttgg agcagctttc aagcgacgta CD 551 taagcaacgg gataggctca gataaatgtt tatctgctga gacactggat CD 601 gctcaccgaa agaggggaat tgcacgtaag aaaagggatg atcctcatga CD 651 accggcttcc accaatcgaa gtttcgcgca tctcagatgg tggtaa FT EDITED CDNA CD 1 aTgaacagag gaggtggggg ggaacggaac atttcgcttt tatgcgcgcg CD 51 catattgcat tatatagata gattggccga gaaggatgag cagaagcaat CD 101 tgcgtgatag ggagttggcc gaaaaagatg gacagaaaca attgcataat CD 151 ataaattcat cggcggccgg gggagaggga gggcttttgt caccaaaacc CD 201 taggggccgt agggcgggca catacaatct cttggagatt ttgagctata CD 251 tcgggggatt ggatggtaaa cagaaacaat tgatcaataa gtcagtcaac CD 301 tttcgcacga tcgatggcaa aagaacgaaa gctcgtgcta ttgcttatca CD 351 aacttttcat cgcccagctc gaactgaacg cgatgtgatc aaacttctgg CD 401 ttaatgccgt agagaatata aagcccatat gcgaagcggg aaaagtaaga CD 451 gtcgcaggta ctacttataa tgtacctgag attgtagcca gggatcgtca CD 501 acaaacctta gctattcgtt ggatccttgg agcagctttc aagcgacgta CD 551 taagcaacgg gataggctca gataaatgtt tatctgctga gacactggat CD 601 gctcaccgaa agaggggaat tgcacgtaag aaaagggatg atcctcatga CD 651 accggcttcc accaatcgaa gtttcgcgca tctcagatgg tggtaa SQ SEQUENCE 232 AA; MNRGGGGERN ISLLCARILH YIDRLAEKDE QKQLRDRELA EKDGQKQLHN INSSAAGGEG GLLSPKPRGR RAGTYNLLEI LSYIGGLDGK QKQLINKSVN FRTIDGKRTK ARAIAYQTFH RPARTERDVI KLLVNAVENI KPICEAGKVR VAGTTYNVPE IVARDRQQTL AIRWILGAAF KRRISNGIGS DKCLSAETLD AHRKRGIARK KRDDPHEPAS TNRSFAHLRW W* // ID AY030286_1 STANDARD; PRT; 328 AA. AC AY030286; DT Tue Jul 21 07:03:14 2009 DE Prorocentrum minimum cytochrome b gene, partial cds; mitochondrial OS mitochondrion Prorocentrum minimum OC Prorocentrum minimum RN [1] RL J. Mol. Biol. 320 (4), 727-739 (2002) RL PUBMED 12095251 FT N-terminal not determined FT C-terminal not determined FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAK67259.3 FT PROTEIN_NAME : cytochrome b FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 982 FT DIRECTIONS : positive FT EDITING : 16 F(tTt) -> S(tCt) FT EDITING : 26 V(Gtt) -> I(Att) FT EDITING : 27 A(Gct) -> T(Act) FT EDITING : 29 M(atG) -> I(atA) FT EDITING : 33 V(Gtc) -> I(Atc) FT EDITING : 39 A(gCt) -> G(gGt) FT EDITING : 56 L(Ctt) -> F(Ttt) FT EDITING : 60 V(Gtc) -> I(Atc) FT EDITING : 69 F(Ttt) -> L(Ctt) FT EDITING : 72 A(GcG) -> T(AcT) FT EDITING : 90 F(tTt) -> S(tCt) FT EDITING : 108 L(Ctc) -> F(Ttc) FT EDITING : 114 I(aTa) -> T(aCa) FT EDITING : 145 V(Gta) -> I(Ata) FT EDITING : 148 I(Att) -> V(Gtt) FT EDITING : 152 Y(Tat) -> H(Cat) FT EDITING : 153 C(tGt) -> Y(tAt) FT EDITING : 155 H(Cac) -> Y(Tac) FT EDITING : 156 C(tGt) -> Y(tAt) FT EDITING : 215 L(CtT) -> F(TtC) FT EDITING : 223 F(Ttt) -> L(Ctt) FT EDITING : 230 V(Gtc) -> I(Atc) FT EDITING : 233 L(Ctc) -> F(Ttc) FT EDITING : 242 A(gCt) -> V(gTt) FT EDITING : 244 A(gCa) -> G(gGa) FT EDITING : 276 V(Gtg) -> M(Atg) FT EDITING : 283 A(Gct) -> T(Act) FT EDITING : 284 L(Ctc) -> F(Ttc) FT CODON_START : 1 CL CDNALEN 982 NT; CD 1 atgaaatctc atttacaaac atatccttgt cctcttcaga ttaattTttt CD 51 ttggaatctg ggttttttat taggaGttGc tattatGtta caaattGtca CD 101 caggaatctt cttagCttta cattatacat cagatcttaa ttcagcatat CD 151 tatcaaattt tctttCttat tagagaaGtc tattatggac ggtgtttacg CD 201 ttatTttcat tctGcGggag catcatttgt ctttctattt ctatttctac CD 251 atcttggaag agctatatTt tatggttcat acttttattc atcttctact CD 301 tggttttcag gaattcttct tCtcttcttc ttaatggcta Tagcatttat CD 351 tggttatgtc ttaccttttg gacaaatgag tttctgggga gctacagtaa CD 401 ttacaaattt attatctcct tttccatctt taGtagaatg gAtttgtgga CD 451 ggaTattGtg ttCactGtcc aacattgaag aggttctttc tcattcattt CD 501 tatcttccca tttctccttt gtggttttct ttttattcat cttttttatc CD 551 ttcattttct atcttctaat aatcctttga ggaattcaac aaataataaa CD 601 atcccatttt tccctttcat ttttcttaaa gatttctttg gtCtTattct CD 651 aattctctgt ctatatTttc ttcaaactca ttttcacGtc tcttctCtct CD 701 cacatccaga taatgcatta gaagCttctg Cattacttac tcctttacat CD 751 atagtacctg aatggtattt cctatgccaa tatgctatgt taaaagctgt CD 801 tcccaacaaa aatgcaggat tcataGtgtt attaacttct atctttGctC CD 851 tctttttctt tggagaaatt agaaatctaa caactttctg tctcttaaat CD 901 aataatggtt tttctctttc aaaatcttat ttctttcttc tggttctttc CD 951 ttttctttgg ataggtgctc aattccctca ag FT EDITED CDNA CD 1 atgaaatctc atttacaaac atatccttgt cctcttcaga ttaattCttt CD 51 ttggaatctg ggttttttat taggaAttAc tattatAtta caaattAtca CD 101 caggaatctt cttagGttta cattatacat cagatcttaa ttcagcatat CD 151 tatcaaattt tctttTttat tagagaaAtc tattatggac ggtgtttacg CD 201 ttatCttcat tctAcTggag catcatttgt ctttctattt ctatttctac CD 251 atcttggaag agctatatCt tatggttcat acttttattc atcttctact CD 301 tggttttcag gaattcttct tTtcttcttc ttaatggcta Cagcatttat CD 351 tggttatgtc ttaccttttg gacaaatgag tttctgggga gctacagtaa CD 401 ttacaaattt attatctcct tttccatctt taAtagaatg gGtttgtgga CD 451 ggaCattAtg ttTactAtcc aacattgaag aggttctttc tcattcattt CD 501 tatcttccca tttctccttt gtggttttct ttttattcat cttttttatc CD 551 ttcattttct atcttctaat aatcctttga ggaattcaac aaataataaa CD 601 atcccatttt tccctttcat ttttcttaaa gatttctttg gtTtCattct CD 651 aattctctgt ctatatCttc ttcaaactca ttttcacAtc tcttctTtct CD 701 cacatccaga taatgcatta gaagTttctg Gattacttac tcctttacat CD 751 atagtacctg aatggtattt cctatgccaa tatgctatgt taaaagctgt CD 801 tcccaacaaa aatgcaggat tcataAtgtt attaacttct atctttActT CD 851 tctttttctt tggagaaatt agaaatctaa caactttctg tctcttaaat CD 901 aataatggtt tttctctttc aaaatcttat ttctttcttc tggttctttc CD 951 ttttctttgg ataggtgctc aattccctca ag SQ SEQUENCE 328 AA; MKSHLQTYPC PLQINSFWNL GFLLGITIIL QIITGIFLGL HYTSDLNSAY YQIFFFIREI YYGRCLRYLH STGASFVFLF LFLHLGRAIS YGSYFYSSST WFSGILLFFF LMATAFIGYV LPFGQMSFWG ATVITNLLSP FPSLIEWVCG GHYVYYPTLK RFFLIHFIFP FLLCGFLFIH LFYLHFLSSN NPLRNSTNNK IPFFPFIFLK DFFGFILILC LYLLQTHFHI SSFSHPDNAL EVSGLLTPLH IVPEWYFLCQ YAMLKAVPNK NAGFIMLLTS IFTFFFFGEI RNLTTFCLLN NNGFSLSKSY FFLLVLSFLW IGAQFPQX // ID AY178864_2 STANDARD; PRT; 499 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhB FT NOTE : ndhB spans the LSC and IR with the intron across FT LOCUS_TAG : FT PROTEIN_ID : AAP29370.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 243/0 FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 31 A(gCC) -> V(gTT) FT EDITING : 71 T(acC) -> T(acT) FT EDITING : 94 S(tCa) -> L(tTa) FT EDITING : 149 C(tgC) -> C(tgT) FT EDITING : 155 T(acC) -> T(acT) FT EDITING : 166 T(aCg) -> M(aTg) FT EDITING : 170 S(tCg) -> L(tTg) FT EDITING : 178 P(cCc) -> L(cTc) FT EDITING : 185 S(tCg) -> L(tTg) FT EDITING : 189 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 1497 NT; CD 1 aCgaatgata ttaacttatt tttagcaaaa ttaacttata cctccgccaa CD 51 attgacaatt ttaccagaaa ttatcttgat tctaggctta gCCgcagtag CD 101 ttgtaattga cttattgagt aaaggaaaaa acacattttt gctttacaaa CD 151 atctccatgg taaccctttt agctagtgca gttatcttgt tatggcagtg CD 201 gggatttttt acCgcttatg aacgttctca cgccagagat tttgggaata CD 251 ttttcagatt ttttttactc atttgctcgt Cattatctat ttcttcgtcg CD 301 gttgattata tactttgttc aaaaatgtct ttagctgaat ttttattgtt CD 351 taaattagct gcaggtttgg ggggtatggt tctcagttgt gcaaatgatt CD 401 tggtaactat ttacgtgtcc ctggaattct tagccttatc ttcctgCttt CD 451 ttatctggat atacCaaacg ggacatgaga tcgaatgaag caactaCgaa CD 501 attcctgtCg atgagtggag cgagttcctc ccCcctatta tatggtttct CD 551 cttCgttata tggacCttcc ggcggacagc ttcagcttga caaaatagtt CD 601 gacggaatta tattcaatcg atatggttct ataatttatc tatctgctgc CD 651 gtttactaca gccggaacag cattcaaatt gtctctcttt ccatttcacc CD 701 agtggacacc tgatgtatat gaaggatccc ctacaccagt cgttgctttt CD 751 ttctccgtta cctccaaagt agcagctcca gcttcattta caagactctt CD 801 cggtctaatt ttcccatact tctctaatga gtggcatgtc gcggtgggat CD 851 tattagctac ctttagcatg atattgggaa atttaattgc cgttactcag CD 901 agaagcgtaa aacgtatgct agcttatcct tctataagcc aaattggata CD 951 tatcatgatt ggggtacttt ctgcagactc agggaacggt tacgcaagta CD 1001 tgataactta tacgtttatc tatatactca tgaatttggg aacttttgct CD 1051 cgtatcaccc catttggttt acgaaccgga actgataata tcagggatta CD 1101 tgcgggatta tacatgaagg atcctgttct aacattttct tcggttttac CD 1151 gttcaccatc cctagggggt atgcctccac catccggttt ttttggtaaa CD 1201 ctctatctct tttggcatgg atggaaagct ggtttgtact catcagttcc CD 1251 ggtggcgctc gtcacaagtg tcatttccat ctattactat ctaaaaataa CD 1301 ttaaatcaat gttcaccggg aagagtggga ggagcgatac acccctaaat CD 1351 tctagacaaa attcattagt ttctctatca atttcgattt cgaaaaattc CD 1401 tcttgaaata gctatgatca ttcgtgcgct agcatcaacc ctatcgggta CD 1451 tattcataga tcctattatc gagatcacac ggaatacctt cttttag FT EDITED CDNA CD 1 aTgaatgata ttaacttatt tttagcaaaa ttaacttata cctccgccaa CD 51 attgacaatt ttaccagaaa ttatcttgat tctaggctta gTTgcagtag CD 101 ttgtaattga cttattgagt aaaggaaaaa acacattttt gctttacaaa CD 151 atctccatgg taaccctttt agctagtgca gttatcttgt tatggcagtg CD 201 gggatttttt acTgcttatg aacgttctca cgccagagat tttgggaata CD 251 ttttcagatt ttttttactc atttgctcgt Tattatctat ttcttcgtcg CD 301 gttgattata tactttgttc aaaaatgtct ttagctgaat ttttattgtt CD 351 taaattagct gcaggtttgg ggggtatggt tctcagttgt gcaaatgatt CD 401 tggtaactat ttacgtgtcc ctggaattct tagccttatc ttcctgTttt CD 451 ttatctggat atacTaaacg ggacatgaga tcgaatgaag caactaTgaa CD 501 attcctgtTg atgagtggag cgagttcctc ccTcctatta tatggtttct CD 551 cttTgttata tggacTttcc ggcggacagc ttcagcttga caaaatagtt CD 601 gacggaatta tattcaatcg atatggttct ataatttatc tatctgctgc CD 651 gtttactaca gccggaacag cattcaaatt gtctctcttt ccatttcacc CD 701 agtggacacc tgatgtatat gaaggatccc ctacaccagt cgttgctttt CD 751 ttctccgtta cctccaaagt agcagctcca gcttcattta caagactctt CD 801 cggtctaatt ttcccatact tctctaatga gtggcatgtc gcggtgggat CD 851 tattagctac ctttagcatg atattgggaa atttaattgc cgttactcag CD 901 agaagcgtaa aacgtatgct agcttatcct tctataagcc aaattggata CD 951 tatcatgatt ggggtacttt ctgcagactc agggaacggt tacgcaagta CD 1001 tgataactta tacgtttatc tatatactca tgaatttggg aacttttgct CD 1051 cgtatcaccc catttggttt acgaaccgga actgataata tcagggatta CD 1101 tgcgggatta tacatgaagg atcctgttct aacattttct tcggttttac CD 1151 gttcaccatc cctagggggt atgcctccac catccggttt ttttggtaaa CD 1201 ctctatctct tttggcatgg atggaaagct ggtttgtact catcagttcc CD 1251 ggtggcgctc gtcacaagtg tcatttccat ctattactat ctaaaaataa CD 1301 ttaaatcaat gttcaccggg aagagtggga ggagcgatac acccctaaat CD 1351 tctagacaaa attcattagt ttctctatca atttcgattt cgaaaaattc CD 1401 tcttgaaata gctatgatca ttcgtgcgct agcatcaacc ctatcgggta CD 1451 tattcataga tcctattatc gagatcacac ggaatacctt cttttag SQ SEQUENCE 499 AA; MNDINLFLAK LTYTSAKLTI LPEIILILGL VAVVVIDLLS KGKNTFLLYK ISMVTLLASA VILLWQWGFF TAYERSHARD FGNIFRFFLL ICSLLSISSS VDYILCSKMS LAEFLLFKLA AGLGGMVLSC ANDLVTIYVS LEFLALSSCF LSGYTKRDMR SNEATMKFLL MSGASSSLLL YGFSLLYGLS GGQLQLDKIV DGIIFNRYGS IIYLSAAFTT AGTAFKLSLF PFHQWTPDVY EGSPTPVVAF FSVTSKVAAP ASFTRLFGLI FPYFSNEWHV AVGLLATFSM ILGNLIAVTQ RSVKRMLAYP SISQIGYIMI GVLSADSGNG YASMITYTFI YILMNLGTFA RITPFGLRTG TDNIRDYAGL YMKDPVLTFS SVLRSPSLGG MPPPSGFFGK LYLFWHGWKA GLYSSVPVAL VTSVISIYYY LKIIKSMFTG KSGRSDTPLN SRQNSLVSLS ISISKNSLEI AMIIRALAST LSGIFIDPII EITRNTFF* // ID AY178864_3 STANDARD; PRT; 501 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : matK FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29371.2 FT PROTEIN_NAME : maturase K FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1379 - 2881 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 165 S(tCa) -> L(tTa) FT EDITING : 333 S(tCc) -> F(tTc) FT EDITING : 334 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 aCgaaagtca attacggatc tcctgctaaa tctggtcctt tacataagaa CD 51 cggggagttt tatattaaca agaattgttt tttacaccca cttctttttt CD 101 tgtctgagga gaatttttat ttgacagatg gcaaacgccg atcacatggt CD 151 gcagacgcca acttggtttt tggggcctgg agtacggtgg cagtcaaacg CD 201 tttaattggt agcgtacgtg accctaatct aaattttttg aaaatttacg CD 251 attcagtgtc tgttcgaaac ttaaccgacg gattagacgt ggatttgtat CD 301 cttcacccgc ttttgaaaat gacatatctc atattaggca tagccctttt CD 351 tcctaaaatc agagctgaaa caagtagtaa gtcaaagatg ttgcagtcta CD 401 ttcattcgat gtttttattt ctggaagata gattttcaaa atctaatcat CD 451 attttagaag cggatttgcc acataatctt catctagaaa cttCaattcg CD 501 attgttccga cgacaaatta aagatgtttc atttctgcat ctgctaagaa CD 551 tagtttttcg taaaagaaaa atattttgcg gaaaaacttt ttattcccct CD 601 gggggggggc aagacggaag tgttgacatc ccagttcgaa atttctacat CD 651 cttcgagatc gattcacttc tactgatccc ctggaaacag gtatataaat CD 701 tccgagtcaa ttatttatcc cctatagata gttgtaatat cattcggaaa CD 751 gagatatatg cttctgcata taaattcaaa tggaacaaag cgagtattga CD 801 ttactccttt agccgaagtt tgtggattca ttacggaaga tggagaaaca CD 851 aatttcttat agcctccgag ggaactcact attttgtgaa aaaaatgctt CD 901 tactatcttt ggatacttct aaaatatcat tttcactatc ggatcaaatc CD 951 taatgaaccc tggataagaa aattattacc cactagctgc gtctcatCcc CD 1001 Cgggttatac actactagcg caactggtat caaaaaatgt tcgtattgaa CD 1051 accgtgacag atttgtatat cagtattttg ggtggaaaaa agttttatcc CD 1101 taaaattcca aattcaataa taattactac cttggcaaaa caaagatttt CD 1151 gtgacttcac tggacgtccg attggtaaat cggcctgggt tacttctaca CD 1201 gatgataaaa taattgatgg atatgtccaa ctttggcaag ttttttcctt CD 1251 gtattatggt gcctcgatga atcagtatag attgcgcaga ttgatatttc CD 1301 tattgcagat gtcatgtgat agtacgttag ctggtaaaca tagaagtaca CD 1351 atacgtctct tgagatgtaa atctaatgta gaggcgctca atcaaattct CD 1401 ggcatctaga aagtttgaat tgtctagtag tcggagggtt tggcgttcat CD 1451 cttcgatacg gtctgtctta gtacaattca ccgtattaga tatcgggctc CD 1501 tga FT EDITED CDNA CD 1 aTgaaagtca attacggatc tcctgctaaa tctggtcctt tacataagaa CD 51 cggggagttt tatattaaca agaattgttt tttacaccca cttctttttt CD 101 tgtctgagga gaatttttat ttgacagatg gcaaacgccg atcacatggt CD 151 gcagacgcca acttggtttt tggggcctgg agtacggtgg cagtcaaacg CD 201 tttaattggt agcgtacgtg accctaatct aaattttttg aaaatttacg CD 251 attcagtgtc tgttcgaaac ttaaccgacg gattagacgt ggatttgtat CD 301 cttcacccgc ttttgaaaat gacatatctc atattaggca tagccctttt CD 351 tcctaaaatc agagctgaaa caagtagtaa gtcaaagatg ttgcagtcta CD 401 ttcattcgat gtttttattt ctggaagata gattttcaaa atctaatcat CD 451 attttagaag cggatttgcc acataatctt catctagaaa cttTaattcg CD 501 attgttccga cgacaaatta aagatgtttc atttctgcat ctgctaagaa CD 551 tagtttttcg taaaagaaaa atattttgcg gaaaaacttt ttattcccct CD 601 gggggggggc aagacggaag tgttgacatc ccagttcgaa atttctacat CD 651 cttcgagatc gattcacttc tactgatccc ctggaaacag gtatataaat CD 701 tccgagtcaa ttatttatcc cctatagata gttgtaatat cattcggaaa CD 751 gagatatatg cttctgcata taaattcaaa tggaacaaag cgagtattga CD 801 ttactccttt agccgaagtt tgtggattca ttacggaaga tggagaaaca CD 851 aatttcttat agcctccgag ggaactcact attttgtgaa aaaaatgctt CD 901 tactatcttt ggatacttct aaaatatcat tttcactatc ggatcaaatc CD 951 taatgaaccc tggataagaa aattattacc cactagctgc gtctcatTcc CD 1001 Tgggttatac actactagcg caactggtat caaaaaatgt tcgtattgaa CD 1051 accgtgacag atttgtatat cagtattttg ggtggaaaaa agttttatcc CD 1101 taaaattcca aattcaataa taattactac cttggcaaaa caaagatttt CD 1151 gtgacttcac tggacgtccg attggtaaat cggcctgggt tacttctaca CD 1201 gatgataaaa taattgatgg atatgtccaa ctttggcaag ttttttcctt CD 1251 gtattatggt gcctcgatga atcagtatag attgcgcaga ttgatatttc CD 1301 tattgcagat gtcatgtgat agtacgttag ctggtaaaca tagaagtaca CD 1351 atacgtctct tgagatgtaa atctaatgta gaggcgctca atcaaattct CD 1401 ggcatctaga aagtttgaat tgtctagtag tcggagggtt tggcgttcat CD 1451 cttcgatacg gtctgtctta gtacaattca ccgtattaga tatcgggctc CD 1501 tga SQ SEQUENCE 501 AA; MKVNYGSPAK SGPLHKNGEF YINKNCFLHP LLFLSEENFY LTDGKRRSHG ADANLVFGAW STVAVKRLIG SVRDPNLNFL KIYDSVSVRN LTDGLDVDLY LHPLLKMTYL ILGIALFPKI RAETSSKSKM LQSIHSMFLF LEDRFSKSNH ILEADLPHNL HLETLIRLFR RQIKDVSFLH LLRIVFRKRK IFCGKTFYSP GGGQDGSVDI PVRNFYIFEI DSLLLIPWKQ VYKFRVNYLS PIDSCNIIRK EIYASAYKFK WNKASIDYSF SRSLWIHYGR WRNKFLIASE GTHYFVKKML YYLWILLKYH FHYRIKSNEP WIRKLLPTSC VSFLGYTLLA QLVSKNVRIE TVTDLYISIL GGKKFYPKIP NSIIITTLAK QRFCDFTGRP IGKSAWVTST DDKIIDGYVQ LWQVFSLYYG ASMNQYRLRR LIFLLQMSCD STLAGKHRST IRLLRCKSNV EALNQILASR KFELSSSRRV WRSSSIRSVL VQFTVLDIGL * // ID AY178864_5 STANDARD; PRT; 519 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : chlB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29373.2 FT PROTEIN_NAME : photochlorophyllide reductase subunit ChlB FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 4441 - 5997 FT DIRECTIONS : negative FT EDITING : 5 H(Cat) -> Y(Tat) FT EDITING : 6 R(Cgg) -> W(Tgg) FT EDITING : 46 P(cCg) -> L(cTg) FT EDITING : 84 *(Taa) -> Q(Caa) FT EDITING : 189 P(cCt) -> L(cTt) FT EDITING : 192 S(tCg) -> L(tTg) FT EDITING : 275 L(Ctt) -> F(Ttt) FT EDITING : 311 S(tCc) -> F(tTc) FT EDITING : 345 R(Cgg) -> W(Tgg) FT EDITING : 409 S(tCa) -> L(tTa) FT EDITING : 439 S(tCa) -> L(tTa) FT EDITING : 440 S(tCa) -> L(tTa) FT EDITING : 473 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1557 NT; CD 1 atgaaattag ctCatCggat gtacgcggga cccgctcaca tcggtaccct CD 51 acgggtagcc agttccttca gaaacgtaca tgctataatg catgcccctt CD 101 taggagatga ttactttaac gtaatgcgtt ccatgcCgga aagggaaaga CD 151 gattttaccc cagtaactgc tagtgtagtg gatcgccacg tgttagcacg CD 201 tggatcccgg gataaggttg taagtaatat aagccgaaaa ggtgaggaaT CD 251 aacgccctga cttaattgta ttgacaccta cgtgtacctc tagtatccta CD 301 caagaagatt tacaaaattt tgtggataga gcttccctgt attctgagtc CD 351 cgacgtaatt ctcgccgatg tcaatcacta ccgagttaac gagcttcaag CD 401 cttcggataa aactttggaa caaatagttc gatattattt agatagggcc CD 451 cgcaaggaag gtatttttaa ccggtccctg acagatgttc cttcagccaa CD 501 tattatagga attctcaccc taggttttca caatcaacat gactgtcgcg CD 551 agttgaaacg tctacCtgga gaatCggggg tttcaattaa tcaaataatc CD 601 ccagaaggag agtttcttaa taatctcaag gatttgccaa gagcttggtt CD 651 taatatagtc ccttaccggg agataggttt gatggcagca agtttcttgg CD 701 agaaagaata tggaatgcct tatatatcaa caactccgat aggtatttca CD 751 aatacagccg acttcgtaat gcaggtggaa aaacttatga atttctgggc CD 801 tactgtatta ctgggaaaga aaCttcatta cgatcaatat gttgaaaatc CD 851 aaactaaatt tgtttctcaa gcagcttggt tttccaaatc tatcgattgc CD 901 caaaatttag ctggaaaaga agcagtggtt tCcggcgatg caactcacgc CD 951 cgcctcgatt accaagatac tctccggaga gatgggaatt cgtgtaagtt CD 1001 gttcaggcac gtattgcaag catgacgcgg gaCggtttaa tgagcaggtt CD 1051 cagggtttgt gtgatgaagt aataattaca gaagatcata ctgaagttgg CD 1101 ggatacgata gctcgtattg agccctctgc tatatttgga actcaaatgg CD 1151 agcgtcatat cggcaaacgt attgacatcc cgtgtggggt tatttcttca CD 1201 ccagttcata ttcagaattt tccttCagga tatcgaccct ttatgggtta CD 1251 cgagggaacg aatcaaatat cagatctaat atacaattca ttcaatctgg CD 1301 gtatggaaga tcactCatCa gacgtgtttg gaggacacga caccaagggg CD 1351 ataagcacca agtccctatc tacaggtgga aaatctattg attggacccc CD 1401 cgaagctgag tcggaacCaa agagaatccc tggttttgtg aggggaaaag CD 1451 taaaaaaaaa taccgaggtt tttgcaagac aaaacaatat tttgaaaatt CD 1501 acagttgatg taatgtatgc ggctaaagaa agaagatcga ttgagtcctt CD 1551 agcttag FT EDITED CDNA CD 1 atgaaattag ctTatTggat gtacgcggga cccgctcaca tcggtaccct CD 51 acgggtagcc agttccttca gaaacgtaca tgctataatg catgcccctt CD 101 taggagatga ttactttaac gtaatgcgtt ccatgcTgga aagggaaaga CD 151 gattttaccc cagtaactgc tagtgtagtg gatcgccacg tgttagcacg CD 201 tggatcccgg gataaggttg taagtaatat aagccgaaaa ggtgaggaaC CD 251 aacgccctga cttaattgta ttgacaccta cgtgtacctc tagtatccta CD 301 caagaagatt tacaaaattt tgtggataga gcttccctgt attctgagtc CD 351 cgacgtaatt ctcgccgatg tcaatcacta ccgagttaac gagcttcaag CD 401 cttcggataa aactttggaa caaatagttc gatattattt agatagggcc CD 451 cgcaaggaag gtatttttaa ccggtccctg acagatgttc cttcagccaa CD 501 tattatagga attctcaccc taggttttca caatcaacat gactgtcgcg CD 551 agttgaaacg tctacTtgga gaatTggggg tttcaattaa tcaaataatc CD 601 ccagaaggag agtttcttaa taatctcaag gatttgccaa gagcttggtt CD 651 taatatagtc ccttaccggg agataggttt gatggcagca agtttcttgg CD 701 agaaagaata tggaatgcct tatatatcaa caactccgat aggtatttca CD 751 aatacagccg acttcgtaat gcaggtggaa aaacttatga atttctgggc CD 801 tactgtatta ctgggaaaga aaTttcatta cgatcaatat gttgaaaatc CD 851 aaactaaatt tgtttctcaa gcagcttggt tttccaaatc tatcgattgc CD 901 caaaatttag ctggaaaaga agcagtggtt tTcggcgatg caactcacgc CD 951 cgcctcgatt accaagatac tctccggaga gatgggaatt cgtgtaagtt CD 1001 gttcaggcac gtattgcaag catgacgcgg gaTggtttaa tgagcaggtt CD 1051 cagggtttgt gtgatgaagt aataattaca gaagatcata ctgaagttgg CD 1101 ggatacgata gctcgtattg agccctctgc tatatttgga actcaaatgg CD 1151 agcgtcatat cggcaaacgt attgacatcc cgtgtggggt tatttcttca CD 1201 ccagttcata ttcagaattt tccttTagga tatcgaccct ttatgggtta CD 1251 cgagggaacg aatcaaatat cagatctaat atacaattca ttcaatctgg CD 1301 gtatggaaga tcactTatTa gacgtgtttg gaggacacga caccaagggg CD 1351 ataagcacca agtccctatc tacaggtgga aaatctattg attggacccc CD 1401 cgaagctgag tcggaacTaa agagaatccc tggttttgtg aggggaaaag CD 1451 taaaaaaaaa taccgaggtt tttgcaagac aaaacaatat tttgaaaatt CD 1501 acagttgatg taatgtatgc ggctaaagaa agaagatcga ttgagtcctt CD 1551 agcttag SQ SEQUENCE 519 AA; MKLAYWMYAG PAHIGTLRVA SSFRNVHAIM HAPLGDDYFN VMRSMLERER DFTPVTASVV DRHVLARGSR DKVVSNISRK GEEQRPDLIV LTPTCTSSIL QEDLQNFVDR ASLYSESDVI LADVNHYRVN ELQASDKTLE QIVRYYLDRA RKEGIFNRSL TDVPSANIIG ILTLGFHNQH DCRELKRLLG ELGVSINQII PEGEFLNNLK DLPRAWFNIV PYREIGLMAA SFLEKEYGMP YISTTPIGIS NTADFVMQVE KLMNFWATVL LGKKFHYDQY VENQTKFVSQ AAWFSKSIDC QNLAGKEAVV FGDATHAASI TKILSGEMGI RVSCSGTYCK HDAGWFNEQV QGLCDEVIIT EDHTEVGDTI ARIEPSAIFG TQMERHIGKR IDIPCGVISS PVHIQNFPLG YRPFMGYEGT NQISDLIYNS FNLGMEDHLL DVFGGHDTKG ISTKSLSTGG KSIDWTPEAE SELKRIPGFV RGKVKKNTEV FARQNNILKI TVDVMYAAKE RRSIESLA* // ID AY178864_9 STANDARD; PRT; 508 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : atpA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29377.2 FT PROTEIN_NAME : ATP synthase CF1 alpha chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 9744 - 11267 FT DIRECTIONS : negative FT EDITING : 18 I(atC) -> I(atT) FT EDITING : 57 S(tCC) -> F(tTT) FT EDITING : 66 S(tCg) -> L(tTg) FT EDITING : 68 P(cCg) -> L(cTg) FT EDITING : 78 T(aCg) -> M(aTg) FT EDITING : 130 S(tCg) -> L(tTg) FT EDITING : 186 P(cCa) -> L(cTa) FT EDITING : 294 H(Cac) -> Y(Tac) FT EDITING : 343 *(Taa) -> Q(Caa) FT EDITING : 344 T(aCa) -> I(aTa) FT EDITING : 391 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 1524 NT; CD 1 atggtaataa acattcaacc tgacgagatt ggcagcatca ttcgcaagca CD 51 aatCaaaggg tatgttccgg aaatgaaagt tgttaacatc ggtactgtgc CD 101 ttcaagtggg agacggaatc gcccgtattc acggacttga tgaagtaatg CD 151 gctggcgaat tggtggaatC Cgaagacggt acagttggca ttgcttCgaa CD 201 tcCggaatct gataatgttg gggctgtgct gaCgggtgat ggtctaacta CD 251 tacgagaagg gggttcagta cgggcaacgg gtaagattgc tcaaatacca CD 301 gtcagtgact cgtttttagg ccgcgttgta aatgcattgg cgcaacctat CD 351 cgatggaaaa ggacaaatcc cagcttctga gttcagatCg atagaatctt CD 401 ccgctccggg gattatttca agacgctccg tgtacgaacc cctacaaaca CD 451 ggtctgattg ctattgattc tatgattccc atcggtcgtg gccagcgaga CD 501 gttaattatt ggggatagac agactggcaa aacggcagta gctacagata CD 551 cgattcCaaa tcagaaaggt caaaatgtca tatgtgttta tgtagctatt CD 601 ggccaaaagg cttcatctgt ggctcaagta gttgacacct ttcgggaacg CD 651 tggcgccctg gaatacacca tcgtagtctc ggaaactgca aactctccag CD 701 ccactttgca atacctcgcg ccttacacag gggcagctct agccgaatac CD 751 ttcatgtatc gcaaacagca tactttgatt atctacgacg atctctctaa CD 801 acaagctcaa gcttatcgac agatgtcttt attattgaaa cgcccgcccg CD 851 ggcgagaagc gtatccggga gatgtttttC acttacattc ccgcctcttg CD 901 gagagggccg ctaaattgag tacccaatta ggggagggca gtatgacagc CD 951 tttacccatc gttgagacac aggcaggaga tgtctcggct tacattccta CD 1001 ccaatgttat ttctattacc gatggaTaaa Catttctatc agcagattta CD 1051 tttaacgccg ggattcgacc ggcaattaat gtgggtatct ctgtatctag CD 1101 ggtaggctct gcagctcaaa ttaaagcaat gaaacaagta gccggtaaat CD 1151 tgaaattgga attggcacaa tCtgcagaat tggaggcttt cgcgcaattt CD 1201 gcttccgatc tcgataaaac tactcaaaat caattagcta gaggacaacg CD 1251 cttgcgcgag cttctcaaac aatctcagtc agccccatta gcggtggaag CD 1301 aacaagtagc taccatttac accggagtta acggatattt agatgtttta CD 1351 gatgttgaac aagtaaaacg gttcctggtt cagctacggg aatatgtagc CD 1401 aacgagtaaa cctagttttg gggaaattat tcgttctaca aaggtgttta CD 1451 cggaacaagc ggaagccctt ttgaaagaag caattaagga atcaacggaa CD 1501 ctttttttac tgcaagagag atga FT EDITED CDNA CD 1 atggtaataa acattcaacc tgacgagatt ggcagcatca ttcgcaagca CD 51 aatTaaaggg tatgttccgg aaatgaaagt tgttaacatc ggtactgtgc CD 101 ttcaagtggg agacggaatc gcccgtattc acggacttga tgaagtaatg CD 151 gctggcgaat tggtggaatT Tgaagacggt acagttggca ttgcttTgaa CD 201 tcTggaatct gataatgttg gggctgtgct gaTgggtgat ggtctaacta CD 251 tacgagaagg gggttcagta cgggcaacgg gtaagattgc tcaaatacca CD 301 gtcagtgact cgtttttagg ccgcgttgta aatgcattgg cgcaacctat CD 351 cgatggaaaa ggacaaatcc cagcttctga gttcagatTg atagaatctt CD 401 ccgctccggg gattatttca agacgctccg tgtacgaacc cctacaaaca CD 451 ggtctgattg ctattgattc tatgattccc atcggtcgtg gccagcgaga CD 501 gttaattatt ggggatagac agactggcaa aacggcagta gctacagata CD 551 cgattcTaaa tcagaaaggt caaaatgtca tatgtgttta tgtagctatt CD 601 ggccaaaagg cttcatctgt ggctcaagta gttgacacct ttcgggaacg CD 651 tggcgccctg gaatacacca tcgtagtctc ggaaactgca aactctccag CD 701 ccactttgca atacctcgcg ccttacacag gggcagctct agccgaatac CD 751 ttcatgtatc gcaaacagca tactttgatt atctacgacg atctctctaa CD 801 acaagctcaa gcttatcgac agatgtcttt attattgaaa cgcccgcccg CD 851 ggcgagaagc gtatccggga gatgtttttT acttacattc ccgcctcttg CD 901 gagagggccg ctaaattgag tacccaatta ggggagggca gtatgacagc CD 951 tttacccatc gttgagacac aggcaggaga tgtctcggct tacattccta CD 1001 ccaatgttat ttctattacc gatggaCaaa Tatttctatc agcagattta CD 1051 tttaacgccg ggattcgacc ggcaattaat gtgggtatct ctgtatctag CD 1101 ggtaggctct gcagctcaaa ttaaagcaat gaaacaagta gccggtaaat CD 1151 tgaaattgga attggcacaa tTtgcagaat tggaggcttt cgcgcaattt CD 1201 gcttccgatc tcgataaaac tactcaaaat caattagcta gaggacaacg CD 1251 cttgcgcgag cttctcaaac aatctcagtc agccccatta gcggtggaag CD 1301 aacaagtagc taccatttac accggagtta acggatattt agatgtttta CD 1351 gatgttgaac aagtaaaacg gttcctggtt cagctacggg aatatgtagc CD 1401 aacgagtaaa cctagttttg gggaaattat tcgttctaca aaggtgttta CD 1451 cggaacaagc ggaagccctt ttgaaagaag caattaagga atcaacggaa CD 1501 ctttttttac tgcaagagag atga SQ SEQUENCE 508 AA; MVINIQPDEI GSIIRKQIKG YVPEMKVVNI GTVLQVGDGI ARIHGLDEVM AGELVEFEDG TVGIALNLES DNVGAVLMGD GLTIREGGSV RATGKIAQIP VSDSFLGRVV NALAQPIDGK GQIPASEFRL IESSAPGIIS RRSVYEPLQT GLIAIDSMIP IGRGQRELII GDRQTGKTAV ATDTILNQKG QNVICVYVAI GQKASSVAQV VDTFRERGAL EYTIVVSETA NSPATLQYLA PYTGAALAEY FMYRKQHTLI IYDDLSKQAQ AYRQMSLLLK RPPGREAYPG DVFYLHSRLL ERAAKLSTQL GEGSMTALPI VETQAGDVSA YIPTNVISIT DGQIFLSADL FNAGIRPAIN VGISVSRVGS AAQIKAMKQV AGKLKLELAQ FAELEAFAQF ASDLDKTTQN QLARGQRLRE LLKQSQSAPL AVEEQVATIY TGVNGYLDVL DVEQVKRFLV QLREYVATSK PSFGEIIRST KVFTEQAEAL LKEAIKESTE LFLLQER* // ID AY178864_10 STANDARD; PRT; 185 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : atpF FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29378.2 FT PROTEIN_NAME : ATP synthase CF0 B chain FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 49/1 FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 555 NT; CD 1 aCgagaagtc taagtgagat catcgctccc tcgagttatt ggaccctcgc CD 51 tggaactatt gggctaaata ctaatatatt tgagataaac ctaattaact CD 101 taatcctggt actaggtata ttattttatt acggaaaggg ggtgttgatc CD 151 aatttattag aaaatcgtga aaggacaatt ttgaacacga ttcaagatgc CD 201 ggaagagcgc cacaaagaag cgactgaaaa acttcagaga gctcgtcttc CD 251 gattgcaaca agcggaaatg aaagcggacg agattcgcat tattggactt CD 301 acgaaaatgg atagggaacg gcgagatctc gttgatgcag ctgacaatga CD 351 tttaagggaa cttgaagaga gtaaaaatta tgcaattcgt tttgagaagc CD 401 aacgagcaat tgagcaggtt cgacagcaag tttctcgact agcctccgaa CD 451 agggctttcg aaagcttgaa cggtcgtcta actaatgaat ttcagctacg CD 501 aatgattgat taccacatcg gcttgctcag agccatggct aacaaatcca CD 551 cgtaa FT EDITED CDNA CD 1 aTgagaagtc taagtgagat catcgctccc tcgagttatt ggaccctcgc CD 51 tggaactatt gggctaaata ctaatatatt tgagataaac ctaattaact CD 101 taatcctggt actaggtata ttattttatt acggaaaggg ggtgttgatc CD 151 aatttattag aaaatcgtga aaggacaatt ttgaacacga ttcaagatgc CD 201 ggaagagcgc cacaaagaag cgactgaaaa acttcagaga gctcgtcttc CD 251 gattgcaaca agcggaaatg aaagcggacg agattcgcat tattggactt CD 301 acgaaaatgg atagggaacg gcgagatctc gttgatgcag ctgacaatga CD 351 tttaagggaa cttgaagaga gtaaaaatta tgcaattcgt tttgagaagc CD 401 aacgagcaat tgagcaggtt cgacagcaag tttctcgact agcctccgaa CD 451 agggctttcg aaagcttgaa cggtcgtcta actaatgaat ttcagctacg CD 501 aatgattgat taccacatcg gcttgctcag agccatggct aacaaatcca CD 551 cgtaa SQ SEQUENCE 185 AA; MRSLSEIIAP SSYWTLAGTI GLNTNIFEIN LINLILVLGI LFYYGKGVLI NLLENRERTI LNTIQDAEER HKEATEKLQR ARLRLQQAEM KADEIRIIGL TKMDRERRDL VDAADNDLRE LEESKNYAIR FEKQRAIEQV RQQVSRLASE RAFESLNGRL TNEFQLRMID YHIGLLRAMA NKST* // ID AY178864_11 STANDARD; PRT; 82 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : atpH FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29379.2 FT PROTEIN_NAME : ATP synthase CF0 C chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 12947 - 13192 FT DIRECTIONS : negative FT EDITING : 57 S(tCg) -> L(tTg) FT EDITING : 68 S(tCa) -> L(tTa) FT EDITING : 72 P(cCa) -> L(cTa) FT EDITING : 74 P(cCg) -> L(cTg) FT EDITING : 75 S(tCa) -> L(tTa) FT EDITING : 80 P(CCt) -> F(TTt) FT CODON_START : 1 CL CDNALEN 246 NT; CD 1 atgaatccat tgatttctgc cgcttccgtc atcgccgctg ggttagctgt CD 51 aggccttgct tcaatcggac ccggtgttgg tcaaggcact gccgcgggtc CD 101 aggcggtcga gggtatagca agacagccag aagcagaagg taaaatacga CD 151 ggcactttat tgttaagttC ggctttcatg gaagctttga caatttatgg CD 201 atCagttgta gctcCagccc CgtCatttgc aaatccgCCt gtctaa FT EDITED CDNA CD 1 atgaatccat tgatttctgc cgcttccgtc atcgccgctg ggttagctgt CD 51 aggccttgct tcaatcggac ccggtgttgg tcaaggcact gccgcgggtc CD 101 aggcggtcga gggtatagca agacagccag aagcagaagg taaaatacga CD 151 ggcactttat tgttaagttT ggctttcatg gaagctttga caatttatgg CD 201 atTagttgta gctcTagccc TgtTatttgc aaatccgTTt gtctaa SQ SEQUENCE 82 AA; MNPLISAASV IAAGLAVGLA SIGPGVGQGT AAGQAVEGIA RQPEAEGKIR GTLLLSLAFM EALTIYGLVV ALALLFANPF V* // ID AY178864_12 STANDARD; PRT; 249 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : atpI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29380.2 FT PROTEIN_NAME : ATP synthase CF0 A chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 14002 - 14748 FT DIRECTIONS : negative FT EDITING : 14 P(cCg) -> L(cTg) FT EDITING : 24 *(Taa) -> Q(Caa) FT EDITING : 78 S(tCt) -> F(tTt) FT EDITING : 82 S(tCa) -> L(tTa) FT EDITING : 104 P(cCa) -> L(cTa) FT EDITING : 149 H(Cat) -> Y(Tat) FT EDITING : 162 S(tCC) -> F(tTT) FT EDITING : 181 S(tCc) -> F(tTc) FT EDITING : 205 P(cCc) -> L(cTc) FT EDITING : 217 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 747 NT; CD 1 atgcaaattg aacaattgca aattaatgaa attgataatc Cgcatcaagt CD 51 atcaagtgta gaagtaggtT aacatctcta ttggcaaata ggaaactttc CD 101 aagttcatgc acaggttctt ataacttctt gggttgtcgt cgccatattg CD 151 gtagctttac ccgctacaac taccggcaat ttgcaatcga taccaactgg CD 201 tacacaaaat tttatcgagt atgttcttga atCtattcga gattCaacca CD 251 ggacccagat gggggaagag ggatatcgac cctgggtccc atttattgga CD 301 acaatgtttc Catttatttt tgcttctaac tggtcaggtg ctttgctacc CD 351 ctggcgagtc attcagttac ctcatgggga gttggctgca cctacgaacg CD 401 atattaacac caccgttgca ttagccttgc ttacatcagt agcaCatttt CD 451 tacgcgggtt tgtacaagag agggtttagc tattCCggca aatacataca CD 501 gccaactccg atactcctac ctatcaatat tttggaagac tCcaccaaac CD 551 ccctatcgct tagtttccga ttgtttggaa acattttggc tgacgagttg CD 601 gtagtagctg ttcCcgtctc cctagtaccc ctaattgtcc ctgtacctaC CD 651 gatgcttttg ggattgttta caagtggcat ccaagcttta atctttgcca CD 701 ctttagctgc agcttatatc ggggaatcta tggaaggtca tcattag FT EDITED CDNA CD 1 atgcaaattg aacaattgca aattaatgaa attgataatc Tgcatcaagt CD 51 atcaagtgta gaagtaggtC aacatctcta ttggcaaata ggaaactttc CD 101 aagttcatgc acaggttctt ataacttctt gggttgtcgt cgccatattg CD 151 gtagctttac ccgctacaac taccggcaat ttgcaatcga taccaactgg CD 201 tacacaaaat tttatcgagt atgttcttga atTtattcga gattTaacca CD 251 ggacccagat gggggaagag ggatatcgac cctgggtccc atttattgga CD 301 acaatgtttc Tatttatttt tgcttctaac tggtcaggtg ctttgctacc CD 351 ctggcgagtc attcagttac ctcatgggga gttggctgca cctacgaacg CD 401 atattaacac caccgttgca ttagccttgc ttacatcagt agcaTatttt CD 451 tacgcgggtt tgtacaagag agggtttagc tattTTggca aatacataca CD 501 gccaactccg atactcctac ctatcaatat tttggaagac tTcaccaaac CD 551 ccctatcgct tagtttccga ttgtttggaa acattttggc tgacgagttg CD 601 gtagtagctg ttcTcgtctc cctagtaccc ctaattgtcc ctgtacctaT CD 651 gatgcttttg ggattgttta caagtggcat ccaagcttta atctttgcca CD 701 ctttagctgc agcttatatc ggggaatcta tggaaggtca tcattag SQ SEQUENCE 249 AA; MQIEQLQINE IDNLHQVSSV EVGQHLYWQI GNFQVHAQVL ITSWVVVAIL VALPATTTGN LQSIPTGTQN FIEYVLEFIR DLTRTQMGEE GYRPWVPFIG TMFLFIFASN WSGALLPWRV IQLPHGELAA PTNDINTTVA LALLTSVAYF YAGLYKRGFS YFGKYIQPTP ILLPINILED FTKPLSLSFR LFGNILADEL VVAVLVSLVP LIVPVPMMLL GLFTSGIQAL IFATLAAAYI GESMEGHH* // ID AY178864_13 STANDARD; PRT; 236 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29381.3 FT PROTEIN_NAME : ribosomal protein S2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 14955 - 15662 FT DIRECTIONS : negative FT EDITING : 6 R(Cgg) -> W(Tgg) FT EDITING : 60 S(tCg) -> L(tTg) FT EDITING : 72 P(CCg) -> L(TTg) FT EDITING : 144 *(Taa) -> Q(Caa) FT EDITING : 161 S(tCa) -> L(tTa) FT EDITING : 173 *(Taa) -> Q(Caa) FT EDITING : 183 P(cCg) -> L(cTg) FT EDITING : 221 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 708 NT; CD 1 atgcaacaga aaaatCggac tatcgacttg gaaggaatga tggcagcagg CD 51 aattcacttt ggacatcaaa cccagagatg gaatccaaag atgtctcctt CD 101 atatatttac agaacgtaag ggtgttcata ttctcgactt aactcagacc CD 151 gctcgtctcc tatctgaagc ttgtgactCg gtatttgatg cagcagtaga CD 201 gggaaaggag ttcCCgatgg tgggtacgaa gaatcaagta actgatttaa CD 251 tagtatcagc tgcattgaaa tctcaatgcc attatgtaaa cgagaaatgg CD 301 ttagctggta cgttaacgaa ttgggtcact acagagacac gtctccgcag CD 351 gtttcaacac ttacaaactg ggggcgattt gggagaattc gaccgacttc CD 401 cgaaacggga ggccgcgatt ttgaagggaT aattggttag attaaaaaag CD 451 tgtctaggtg gaattcaata tatgtcagat tCacccgata ttgcgataat CD 501 taccgatcaa cacgaaTaat ctattgccct caaagaatgc agtattcCgg CD 551 gtattcccac aatctgtatc gttgatacag attgtgaccc agatcttgta CD 601 gatgttccaa ttcctggtaa tgatgatgct agatcctcga tccgatggat CD 651 attggataaa cCtgcattag ctattagcga gggtcgttca aacataaagg CD 701 taacttaa FT EDITED CDNA CD 1 atgcaacaga aaaatTggac tatcgacttg gaaggaatga tggcagcagg CD 51 aattcacttt ggacatcaaa cccagagatg gaatccaaag atgtctcctt CD 101 atatatttac agaacgtaag ggtgttcata ttctcgactt aactcagacc CD 151 gctcgtctcc tatctgaagc ttgtgactTg gtatttgatg cagcagtaga CD 201 gggaaaggag ttcTTgatgg tgggtacgaa gaatcaagta actgatttaa CD 251 tagtatcagc tgcattgaaa tctcaatgcc attatgtaaa cgagaaatgg CD 301 ttagctggta cgttaacgaa ttgggtcact acagagacac gtctccgcag CD 351 gtttcaacac ttacaaactg ggggcgattt gggagaattc gaccgacttc CD 401 cgaaacggga ggccgcgatt ttgaagggaC aattggttag attaaaaaag CD 451 tgtctaggtg gaattcaata tatgtcagat tTacccgata ttgcgataat CD 501 taccgatcaa cacgaaCaat ctattgccct caaagaatgc agtattcTgg CD 551 gtattcccac aatctgtatc gttgatacag attgtgaccc agatcttgta CD 601 gatgttccaa ttcctggtaa tgatgatgct agatcctcga tccgatggat CD 651 attggataaa cTtgcattag ctattagcga gggtcgttca aacataaagg CD 701 taacttaa SQ SEQUENCE 236 AA; MQQKNWTIDL EGMMAAGIHF GHQTQRWNPK MSPYIFTERK GVHILDLTQT ARLLSEACDL VFDAAVEGKE FLMVGTKNQV TDLIVSAALK SQCHYVNEKW LAGTLTNWVT TETRLRRFQH LQTGGDLGEF DRLPKREAAI LKGQLVRLKK CLGGIQYMSD LPDIAIITDQ HEQSIALKEC SILGIPTICI VDTDCDPDLV DVPIPGNDDA RSSIRWILDK LALAISEGRS NIKVT* // ID AY178864_14 STANDARD; PRT; 1421 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpoC2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29382.2 FT PROTEIN_NAME : RNA polymerase beta'' chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 15784 - 20046 FT DIRECTIONS : negative FT EDITING : 39 S(tCa) -> L(tTa) FT EDITING : 57 S(tCg) -> L(tTg) FT EDITING : 78 *(Taa) -> Q(Caa) FT EDITING : 182 R(Cgc) -> C(Tgc) FT EDITING : 300 R(Cgg) -> W(Tgg) FT EDITING : 339 S(tCg) -> L(tTg) FT EDITING : 659 P(cCg) -> L(cTg) FT EDITING : 768 P(cCg) -> L(cTg) FT EDITING : 1099 P(cCg) -> L(cTg) FT EDITING : 1253 C(Tgc) -> R(Cgc) FT CODON_START : 1 CL CDNALEN 4263 NT; CD 1 atgatggatc gaaatgaatt acctttctgc aacaagacga tcgatagggc CD 51 tgcgatgaag agactcatcg gcaagttagt tgtttgtttc ggaattgcgt CD 101 ctacaacaaa tatctCagat caagtgaaag ttttgggttt tcagcaagct CD 151 acagaagcat ctatctcatC gggtattgac gacctttcag cagtaccaac CD 201 cagaggttgg cttgtacgag acgcggagaa aTaaggttac gtctcggagg CD 251 ggcattaccg ctgcggaagt ctgcatgcca tagaaaagtt gcgtcaatca CD 301 attgaagcct ggtatgccac aagtgaatgt ttgaaacgag aaatgagtcc CD 351 aagtttcaag atgattgatc ctttgaatcc cgttcacatg atgtctgttt CD 401 caggagcccg agggaccatc tcccaggtcc accaattgct tggcatgagg CD 451 ggattaatgg cagatcctcg aggtcaggta attgacctac ctatccgaag CD 501 aaatctgcgc gaaggtttat ccctgacaga atatattatt tctCgctacg CD 551 gtgctcgcaa aggggttgtg gataccgccg tgcgaacttc agatgccgga CD 601 tacctaacac gtagacttgt cgaagttgtt caacatattg ctgtacgaag CD 651 aagggattgt gaaactccta gaagtctcgc ttttttgact tcaaatactg CD 701 gcgaacgaag acgaggattt cttggcacga tgccgcatca gggattggtt CD 751 ggacgtgtgt tggcggatca tgtttactgg gatgttagat gtattgccac CD 801 ccgtaaccaa gatattagcg acggattggc tagtaacttg atggcgtcct CD 851 cgcagccaat acatgtgaga tctcctttga catgcaaaag cattttcCgg CD 901 atttgtcagt tctgctacgg ttggagcctt gcccattgca atttagtaga CD 951 attgggtgaa gccgttggta tcattgcggg tcaatcaatt ggagaaccgg CD 1001 gaactcaatt gacatCgagg acttttcata caggtggggt atttacaggg CD 1051 gatattgcgg agtacgtacg aattccattc aatggactta ttaaatttga CD 1101 cgaaagatta cttcatccga cccgtacgag gcacgggcat cctgcttgga CD 1151 tgtgccgaaa cgatttaccc ctctttattg gcaattccgt cggtacacaa CD 1201 aattctctta ttccagccca gagtctgctt atgattcgaa ctggtcaata CD 1251 tgttgagtcg caacaagtta tcgcggaagt acgagccaag gagtttcctc CD 1301 ccaaagaatg tattagaaaa cctatttatc caaactcgag gggagaaatt CD 1351 cactggagta aatttgtttg gcatgtccgt gattccatct gcaatatcgc CD 1401 tcgtctcgta cgagaggcga gccatatatg gattctttcg ggatctccat CD 1451 ccaaatttga tgggaactct ttttttcata aagatcaaga tagagttagg CD 1501 ataaaacccc accctatcaa aaggatacgc agtcactcgg agggaatttt CD 1551 tgaagcacaa gccagtgcta gtaactgcgt agatcgtcga aaagggattc CD 1601 aagaatttgg aaccgattca aaatattttt caaattggtc aaaacgtccg CD 1651 agatccaatt acatcctttc aaatgtctgg ttggagcggg ccgagctaga CD 1701 aaactcggtt tctttgctga tggaacgatg ccaaaaaaat atcaaaaaat CD 1751 tagattttgt aagtatcaat gttcaattaa acaatggttc ggatcaggat CD 1801 cacatttttg ccacctatga aaacttcgag tatcaaacca tcgtttcagg CD 1851 gatcataaag tatggcactg tagaaattaa accggtcaat ccgaagagac CD 1901 tccagttaga tggtgggaca gggaataaaa gttctcgtcc ttggtgcagg CD 1951 gtagttagaa aaggaaattt cttccCgatt ccagaagagg tttatcttac CD 2001 gcacgaaccc tcgtcgtcta ttttggtgac aaataatgct attgttaaaa CD 2051 aaggtgcgca aatcactaac aatattatta ccaaatcagg tggattgatt CD 2101 cggatgagaa agagatcaag agatgctact acaataagaa ttctccctgg CD 2151 atatatttat aatccagaga agcaaattaa tatatccaag cggggtaata CD 2201 cattactagc gccgggtaat aggatttcgg atgacattga agtcaaaaat CD 2251 tggatttacc tacaaccatt tacatttcgc agaaaaggaa aaacctttgt CD 2301 ccCgatgaca ccagttagcg agtataactt atccagcgat tctctggcac CD 2351 aagtagcatc tcgatttgac aaaccaaaaa cacagagacg cgcaaaagcc CD 2401 aagacccttt cgttcatttg ttgcaaaaat ggggaaaaaa ttgaagtaat CD 2451 taacgatgtg cctactcaat tagttcggct ttgtttgata attgaatggc CD 2501 agaaatattt gcacgaaacc cttcctagaa aaagaaacta tttctctctt CD 2551 atcagtgtga aaataagtta tttgttcaaa acttttcttc aagtaaatcc CD 2601 gatggtatct ccccctacac aaagaggagt cagggttgat gaaatctttc CD 2651 gaacatcaac gcctcttggc aaaccatctc ctcctcaact tgatctggct CD 2701 aacagttgtt gtaaatcagc tgtcaactgt cagggtatca ttcatttgac CD 2751 tttggaacca gccacatcat tcctgatctt gtcgccattt aatttgtccc CD 2801 gtaataattc agttactgat acgagggatg gtggttgcgg aggagaaatt CD 2851 gggaaatact tctacgggtc agaagatggt ttcttctgca tcggcgagaa CD 2901 taaaaaaaag atctcactga gttctaaatg tatttcagaa aattatgcaa CD 2951 atccaaatgt tgaagaggga tggattaaag ctagaagagc aagttccaat CD 3001 ctcggccaga ggaaagctga ggaggtaggt ctagtgggga ctttgtcccc CD 3051 tatttcttgt tcatcgattc cccatcatct atcactcggc ggcaaaaacc CD 3101 tttctaccag aaaaggtttc gttgattatt cgatagataa gtcggaacat CD 3151 caagatttct atctgattga tgaaagtaaa ttactactga aatgccccat CD 3201 aaatttttat gttaaaaaag gtttcttgga caaaccttct tatttaccga CD 3251 caagagtgtt tagtcgagaa atcatgttaa ttagtctagg actacCgatc CD 3301 agtgaaagtc gatatctaca tcgagatcgg acatgtttcc aatctggcca CD 3351 ggtcatggcc attcaccaag attattcatt agtgagaacg ggtaaaacct CD 3401 ttttggcaac ccggggagca aatccccata agagttccgg ggatatcctt CD 3451 gaggaaggag atacgttaat aacattgccg tatgacagat tgaaatctgg CD 3501 agacattact caaggtctcc caaaggttga gcaactcctg gagtcccgtt CD 3551 ccattgcttc tatttcagca ggaattggag atctttttga gaaatggtgt CD 3601 caaaatatta ctaaattaat tgggaatccc tggagtcact tgctaggtgc CD 3651 tggaagaagt atggagcatt gccaattgat tctaattgat caaattcgaa CD 3701 aagtttatga gtctcaagga gtacggatat gcgacaagca tctagaaatt CD 3751 attgtcTgcc aattgacatc tagggtcgta gcgtctgaag atggggtaac CD 3801 taatgtattc cttcctgggg agcttgttga gttatcacag gcggaacgta CD 3851 taaatcgtgt tttaaagaaa tcaatttttt acgagcctat tgtattgggt CD 3901 atgacgaggg cttctcttag tactactagt tttttggcgg aagcaagttt CD 3951 tcaagaaacc actcgagtat tggctaaagc tgcccttcgc ggccgaattg CD 4001 attggctgaa ggggttgaaa gaaaatgttg ttattggcga ctccgttccc CD 4051 gtcggaacag gtagtccaga aatctattgt caattaaata taaataaaga CD 4101 gaaagaatct cgtttggcaa gtgggggtag taagaagttg acaaaatggg CD 4151 agactggaag tagtctaagt ggttaccata aaaaacggga tttcaatccc CD 4201 agttttttca ttcgtaaaga attgaataga tctttcactc gtcttcatct CD 4251 tgatatgtgg taa FT EDITED CDNA CD 1 atgatggatc gaaatgaatt acctttctgc aacaagacga tcgatagggc CD 51 tgcgatgaag agactcatcg gcaagttagt tgtttgtttc ggaattgcgt CD 101 ctacaacaaa tatctTagat caagtgaaag ttttgggttt tcagcaagct CD 151 acagaagcat ctatctcatT gggtattgac gacctttcag cagtaccaac CD 201 cagaggttgg cttgtacgag acgcggagaa aCaaggttac gtctcggagg CD 251 ggcattaccg ctgcggaagt ctgcatgcca tagaaaagtt gcgtcaatca CD 301 attgaagcct ggtatgccac aagtgaatgt ttgaaacgag aaatgagtcc CD 351 aagtttcaag atgattgatc ctttgaatcc cgttcacatg atgtctgttt CD 401 caggagcccg agggaccatc tcccaggtcc accaattgct tggcatgagg CD 451 ggattaatgg cagatcctcg aggtcaggta attgacctac ctatccgaag CD 501 aaatctgcgc gaaggtttat ccctgacaga atatattatt tctTgctacg CD 551 gtgctcgcaa aggggttgtg gataccgccg tgcgaacttc agatgccgga CD 601 tacctaacac gtagacttgt cgaagttgtt caacatattg ctgtacgaag CD 651 aagggattgt gaaactccta gaagtctcgc ttttttgact tcaaatactg CD 701 gcgaacgaag acgaggattt cttggcacga tgccgcatca gggattggtt CD 751 ggacgtgtgt tggcggatca tgtttactgg gatgttagat gtattgccac CD 801 ccgtaaccaa gatattagcg acggattggc tagtaacttg atggcgtcct CD 851 cgcagccaat acatgtgaga tctcctttga catgcaaaag cattttcTgg CD 901 atttgtcagt tctgctacgg ttggagcctt gcccattgca atttagtaga CD 951 attgggtgaa gccgttggta tcattgcggg tcaatcaatt ggagaaccgg CD 1001 gaactcaatt gacatTgagg acttttcata caggtggggt atttacaggg CD 1051 gatattgcgg agtacgtacg aattccattc aatggactta ttaaatttga CD 1101 cgaaagatta cttcatccga cccgtacgag gcacgggcat cctgcttgga CD 1151 tgtgccgaaa cgatttaccc ctctttattg gcaattccgt cggtacacaa CD 1201 aattctctta ttccagccca gagtctgctt atgattcgaa ctggtcaata CD 1251 tgttgagtcg caacaagtta tcgcggaagt acgagccaag gagtttcctc CD 1301 ccaaagaatg tattagaaaa cctatttatc caaactcgag gggagaaatt CD 1351 cactggagta aatttgtttg gcatgtccgt gattccatct gcaatatcgc CD 1401 tcgtctcgta cgagaggcga gccatatatg gattctttcg ggatctccat CD 1451 ccaaatttga tgggaactct ttttttcata aagatcaaga tagagttagg CD 1501 ataaaacccc accctatcaa aaggatacgc agtcactcgg agggaatttt CD 1551 tgaagcacaa gccagtgcta gtaactgcgt agatcgtcga aaagggattc CD 1601 aagaatttgg aaccgattca aaatattttt caaattggtc aaaacgtccg CD 1651 agatccaatt acatcctttc aaatgtctgg ttggagcggg ccgagctaga CD 1701 aaactcggtt tctttgctga tggaacgatg ccaaaaaaat atcaaaaaat CD 1751 tagattttgt aagtatcaat gttcaattaa acaatggttc ggatcaggat CD 1801 cacatttttg ccacctatga aaacttcgag tatcaaacca tcgtttcagg CD 1851 gatcataaag tatggcactg tagaaattaa accggtcaat ccgaagagac CD 1901 tccagttaga tggtgggaca gggaataaaa gttctcgtcc ttggtgcagg CD 1951 gtagttagaa aaggaaattt cttccTgatt ccagaagagg tttatcttac CD 2001 gcacgaaccc tcgtcgtcta ttttggtgac aaataatgct attgttaaaa CD 2051 aaggtgcgca aatcactaac aatattatta ccaaatcagg tggattgatt CD 2101 cggatgagaa agagatcaag agatgctact acaataagaa ttctccctgg CD 2151 atatatttat aatccagaga agcaaattaa tatatccaag cggggtaata CD 2201 cattactagc gccgggtaat aggatttcgg atgacattga agtcaaaaat CD 2251 tggatttacc tacaaccatt tacatttcgc agaaaaggaa aaacctttgt CD 2301 ccTgatgaca ccagttagcg agtataactt atccagcgat tctctggcac CD 2351 aagtagcatc tcgatttgac aaaccaaaaa cacagagacg cgcaaaagcc CD 2401 aagacccttt cgttcatttg ttgcaaaaat ggggaaaaaa ttgaagtaat CD 2451 taacgatgtg cctactcaat tagttcggct ttgtttgata attgaatggc CD 2501 agaaatattt gcacgaaacc cttcctagaa aaagaaacta tttctctctt CD 2551 atcagtgtga aaataagtta tttgttcaaa acttttcttc aagtaaatcc CD 2601 gatggtatct ccccctacac aaagaggagt cagggttgat gaaatctttc CD 2651 gaacatcaac gcctcttggc aaaccatctc ctcctcaact tgatctggct CD 2701 aacagttgtt gtaaatcagc tgtcaactgt cagggtatca ttcatttgac CD 2751 tttggaacca gccacatcat tcctgatctt gtcgccattt aatttgtccc CD 2801 gtaataattc agttactgat acgagggatg gtggttgcgg aggagaaatt CD 2851 gggaaatact tctacgggtc agaagatggt ttcttctgca tcggcgagaa CD 2901 taaaaaaaag atctcactga gttctaaatg tatttcagaa aattatgcaa CD 2951 atccaaatgt tgaagaggga tggattaaag ctagaagagc aagttccaat CD 3001 ctcggccaga ggaaagctga ggaggtaggt ctagtgggga ctttgtcccc CD 3051 tatttcttgt tcatcgattc cccatcatct atcactcggc ggcaaaaacc CD 3101 tttctaccag aaaaggtttc gttgattatt cgatagataa gtcggaacat CD 3151 caagatttct atctgattga tgaaagtaaa ttactactga aatgccccat CD 3201 aaatttttat gttaaaaaag gtttcttgga caaaccttct tatttaccga CD 3251 caagagtgtt tagtcgagaa atcatgttaa ttagtctagg actacTgatc CD 3301 agtgaaagtc gatatctaca tcgagatcgg acatgtttcc aatctggcca CD 3351 ggtcatggcc attcaccaag attattcatt agtgagaacg ggtaaaacct CD 3401 ttttggcaac ccggggagca aatccccata agagttccgg ggatatcctt CD 3451 gaggaaggag atacgttaat aacattgccg tatgacagat tgaaatctgg CD 3501 agacattact caaggtctcc caaaggttga gcaactcctg gagtcccgtt CD 3551 ccattgcttc tatttcagca ggaattggag atctttttga gaaatggtgt CD 3601 caaaatatta ctaaattaat tgggaatccc tggagtcact tgctaggtgc CD 3651 tggaagaagt atggagcatt gccaattgat tctaattgat caaattcgaa CD 3701 aagtttatga gtctcaagga gtacggatat gcgacaagca tctagaaatt CD 3751 attgtcCgcc aattgacatc tagggtcgta gcgtctgaag atggggtaac CD 3801 taatgtattc cttcctgggg agcttgttga gttatcacag gcggaacgta CD 3851 taaatcgtgt tttaaagaaa tcaatttttt acgagcctat tgtattgggt CD 3901 atgacgaggg cttctcttag tactactagt tttttggcgg aagcaagttt CD 3951 tcaagaaacc actcgagtat tggctaaagc tgcccttcgc ggccgaattg CD 4001 attggctgaa ggggttgaaa gaaaatgttg ttattggcga ctccgttccc CD 4051 gtcggaacag gtagtccaga aatctattgt caattaaata taaataaaga CD 4101 gaaagaatct cgtttggcaa gtgggggtag taagaagttg acaaaatggg CD 4151 agactggaag tagtctaagt ggttaccata aaaaacggga tttcaatccc CD 4201 agttttttca ttcgtaaaga attgaataga tctttcactc gtcttcatct CD 4251 tgatatgtgg taa SQ SEQUENCE 1421 AA; MMDRNELPFC NKTIDRAAMK RLIGKLVVCF GIASTTNILD QVKVLGFQQA TEASISLGID DLSAVPTRGW LVRDAEKQGY VSEGHYRCGS LHAIEKLRQS IEAWYATSEC LKREMSPSFK MIDPLNPVHM MSVSGARGTI SQVHQLLGMR GLMADPRGQV IDLPIRRNLR EGLSLTEYII SCYGARKGVV DTAVRTSDAG YLTRRLVEVV QHIAVRRRDC ETPRSLAFLT SNTGERRRGF LGTMPHQGLV GRVLADHVYW DVRCIATRNQ DISDGLASNL MASSQPIHVR SPLTCKSIFW ICQFCYGWSL AHCNLVELGE AVGIIAGQSI GEPGTQLTLR TFHTGGVFTG DIAEYVRIPF NGLIKFDERL LHPTRTRHGH PAWMCRNDLP LFIGNSVGTQ NSLIPAQSLL MIRTGQYVES QQVIAEVRAK EFPPKECIRK PIYPNSRGEI HWSKFVWHVR DSICNIARLV REASHIWILS GSPSKFDGNS FFHKDQDRVR IKPHPIKRIR SHSEGIFEAQ ASASNCVDRR KGIQEFGTDS KYFSNWSKRP RSNYILSNVW LERAELENSV SLLMERCQKN IKKLDFVSIN VQLNNGSDQD HIFATYENFE YQTIVSGIIK YGTVEIKPVN PKRLQLDGGT GNKSSRPWCR VVRKGNFFLI PEEVYLTHEP SSSILVTNNA IVKKGAQITN NIITKSGGLI RMRKRSRDAT TIRILPGYIY NPEKQINISK RGNTLLAPGN RISDDIEVKN WIYLQPFTFR RKGKTFVLMT PVSEYNLSSD SLAQVASRFD KPKTQRRAKA KTLSFICCKN GEKIEVINDV PTQLVRLCLI IEWQKYLHET LPRKRNYFSL ISVKISYLFK TFLQVNPMVS PPTQRGVRVD EIFRTSTPLG KPSPPQLDLA NSCCKSAVNC QGIIHLTLEP ATSFLILSPF NLSRNNSVTD TRDGGCGGEI GKYFYGSEDG FFCIGENKKK ISLSSKCISE NYANPNVEEG WIKARRASSN LGQRKAEEVG LVGTLSPISC SSIPHHLSLG GKNLSTRKGF VDYSIDKSEH QDFYLIDESK LLLKCPINFY VKKGFLDKPS YLPTRVFSRE IMLISLGLLI SESRYLHRDR TCFQSGQVMA IHQDYSLVRT GKTFLATRGA NPHKSSGDIL EEGDTLITLP YDRLKSGDIT QGLPKVEQLL ESRSIASISA GIGDLFEKWC QNITKLIGNP WSHLLGAGRS MEHCQLILID QIRKVYESQG VRICDKHLEI IVRQLTSRVV ASEDGVTNVF LPGELVELSQ AERINRVLKK SIFYEPIVLG MTRASLSTTS FLAEASFQET TRVLAKAALR GRIDWLKGLK ENVVIGDSVP VGTGSPEIYC QLNINKEKES RLASGGSKKL TKWETGSSLS GYHKKRDFNP SFFIRKELNR SFTRLHLDMW * // ID AY178864_15 STANDARD; PRT; 695 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpoC1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29383.2 FT PROTEIN_NAME : RNA polymerase beta' chain FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 145/0 FT EDITING : 39 *(Taa) -> Q(Caa) FT EDITING : 43 S(tCg) -> L(tTg) FT EDITING : 55 S(tCa) -> L(tTa) FT EDITING : 56 S(tCt) -> F(tTt) FT EDITING : 140 P(cCa) -> L(cTa) FT EDITING : 283 Y(Tat) -> H(Cat) FT EDITING : 417 *(Tga) -> R(Cga) FT EDITING : 483 R(Cgt) -> C(Tgt) FT EDITING : 486 S(tCt) -> F(tTt) FT EDITING : 490 L(Ctt) -> F(Ttt) FT CODON_START : 1 CL CDNALEN 2085 NT; CD 1 atgattcatc gaactaatta tcaacaactt cggattggac tagcttctcc CD 51 cgaacagatt cgcagttggg ccgaaaggga gttacctaat ggagatgtca CD 101 ttggacaagt cgatTaacct tacacatCgc actataagac tcacaaacca CD 151 gagagagatg ggtCatCttg cgaaagaata tttgggccta caaaaagtgg CD 201 agtctgtgct tgcggaaact gccgatctgt caatgacgaa ggagagtctt CD 251 ccagattttg caagcattgc ggagtcgagt ttactgactc tcgagttcgt CD 301 agatatcgga tgggatacat caaactcgcg tgtccagtaa ctcacgtatg CD 351 gtttcttaaa cgaatcccta gttatattgc aaacctacta gccaaacctc CD 401 ttaaagaatt ggaaagccCa gtctattgcg atctttttct agctaggccc CD 451 gtggctgaaa ggcccgctct attaagactg cgggggctgt tcaattatga CD 501 ggatcgagcc tggagaaaca tacttcccac ttttttttct acccaaaatt CD 551 acgagatgct tcgaaaaaat gaaattgtta ctgggggaga tgctatcaga CD 601 gaaggattag ctagcttaga tttgcaaagt tttcttaatt gcgcgtattt CD 651 agagtggcag gcgtcagtaa aacagaagcc agttggaatc gaatgggaag CD 701 atcgaacaat tcgaagaaga aaagatcttc tgatcaggag gattaaacta CD 751 gccaaggatt ttttacggac gaatatgaaa cccgaatgga tggttttata CD 801 ttttataccg gttctcccgc ctgaattaag accaatagtg gaattgTatg CD 851 aaggtgaatt gattacctct gatcttaacg aactttatag gaagattatt CD 901 taccgaaata atactctcag agaattccta tcgggtagtg aatttacacc CD 951 ggaaggatta attgtttgcc aaaaacgact tgttcaagaa gctgtagatg CD 1001 ctctcatcgg tagtggtata cgtgggcaac caatgaggga tattcataat CD 1051 agaccctaca agtcattttc agaggttatt gagggcaagg agggtcgatt CD 1101 tagagaaaat ctactcggca agcgggtcga ttactcaggt cgctccgtaa CD 1151 ttgttgtcgg cccatctctt tcattacacc aatgtggatt acctcgagaa CD 1201 atggcaattg agcttttcca agcttttgta attcgcaatt tgattggaTg CD 1251 acaccttgcc tgtaatttac gagctgctaa gtgcatgata cggaagggga CD 1301 atcccataat atgggaagtt cttcgggaag ttatgcgagg ccatcctgta CD 1351 ctgctgaatc gggcacctac tttgcacaga ttaggcatac aggcgtttca CD 1401 gcccctcttg atagagggac gcgccattcg tctgcatcca ttggttCgtg CD 1451 gggggtCtaa cgcagatCtt gacggggatc agatggccgt tcatgtccct CD 1501 ttatctgtcg aagctcaaat cgaggctcgt cttctgatgt tttcgcatct CD 1551 caatttatta tctcccgcta cgggcgatcc cgtatctgta ccgagtcagg CD 1601 acatgcttct tggtctttat gcgctaacaa ttgaaagtag gcaaggaatc CD 1651 tatagaaata gacatcttgg ttttatagac agggttaacg tatattccac CD 1701 caaactactt catttcagca gttactgtga cttacttcgg gccaaggaat CD 1751 cgagacaagt ggattcccac agtctattgt ggcttcgatg gaaaatcgat CD 1801 ctgcaaatta ttagttcgaa aattcgtgaa ttatcttccg aatctcatta CD 1851 tgaatcgtca ggaacttctt ttcacttcta cgaaaattgc cgaattagaa CD 1901 aatgtaggga tggatctatc tctagtatgt atgtacttac aacagccggt CD 1951 cgcattttat tcaatcaaca attgaaggaa gcaatgcaag gtgtatcaaa CD 2001 gaattctttt tcatacacca cctcatctac gctgagtaca tcaacaatcg CD 2051 ataggtgtaa tactaatagt aataatgagg aatga FT EDITED CDNA CD 1 atgattcatc gaactaatta tcaacaactt cggattggac tagcttctcc CD 51 cgaacagatt cgcagttggg ccgaaaggga gttacctaat ggagatgtca CD 101 ttggacaagt cgatCaacct tacacatTgc actataagac tcacaaacca CD 151 gagagagatg ggtTatTttg cgaaagaata tttgggccta caaaaagtgg CD 201 agtctgtgct tgcggaaact gccgatctgt caatgacgaa ggagagtctt CD 251 ccagattttg caagcattgc ggagtcgagt ttactgactc tcgagttcgt CD 301 agatatcgga tgggatacat caaactcgcg tgtccagtaa ctcacgtatg CD 351 gtttcttaaa cgaatcccta gttatattgc aaacctacta gccaaacctc CD 401 ttaaagaatt ggaaagccTa gtctattgcg atctttttct agctaggccc CD 451 gtggctgaaa ggcccgctct attaagactg cgggggctgt tcaattatga CD 501 ggatcgagcc tggagaaaca tacttcccac ttttttttct acccaaaatt CD 551 acgagatgct tcgaaaaaat gaaattgtta ctgggggaga tgctatcaga CD 601 gaaggattag ctagcttaga tttgcaaagt tttcttaatt gcgcgtattt CD 651 agagtggcag gcgtcagtaa aacagaagcc agttggaatc gaatgggaag CD 701 atcgaacaat tcgaagaaga aaagatcttc tgatcaggag gattaaacta CD 751 gccaaggatt ttttacggac gaatatgaaa cccgaatgga tggttttata CD 801 ttttataccg gttctcccgc ctgaattaag accaatagtg gaattgCatg CD 851 aaggtgaatt gattacctct gatcttaacg aactttatag gaagattatt CD 901 taccgaaata atactctcag agaattccta tcgggtagtg aatttacacc CD 951 ggaaggatta attgtttgcc aaaaacgact tgttcaagaa gctgtagatg CD 1001 ctctcatcgg tagtggtata cgtgggcaac caatgaggga tattcataat CD 1051 agaccctaca agtcattttc agaggttatt gagggcaagg agggtcgatt CD 1101 tagagaaaat ctactcggca agcgggtcga ttactcaggt cgctccgtaa CD 1151 ttgttgtcgg cccatctctt tcattacacc aatgtggatt acctcgagaa CD 1201 atggcaattg agcttttcca agcttttgta attcgcaatt tgattggaCg CD 1251 acaccttgcc tgtaatttac gagctgctaa gtgcatgata cggaagggga CD 1301 atcccataat atgggaagtt cttcgggaag ttatgcgagg ccatcctgta CD 1351 ctgctgaatc gggcacctac tttgcacaga ttaggcatac aggcgtttca CD 1401 gcccctcttg atagagggac gcgccattcg tctgcatcca ttggttTgtg CD 1451 gggggtTtaa cgcagatTtt gacggggatc agatggccgt tcatgtccct CD 1501 ttatctgtcg aagctcaaat cgaggctcgt cttctgatgt tttcgcatct CD 1551 caatttatta tctcccgcta cgggcgatcc cgtatctgta ccgagtcagg CD 1601 acatgcttct tggtctttat gcgctaacaa ttgaaagtag gcaaggaatc CD 1651 tatagaaata gacatcttgg ttttatagac agggttaacg tatattccac CD 1701 caaactactt catttcagca gttactgtga cttacttcgg gccaaggaat CD 1751 cgagacaagt ggattcccac agtctattgt ggcttcgatg gaaaatcgat CD 1801 ctgcaaatta ttagttcgaa aattcgtgaa ttatcttccg aatctcatta CD 1851 tgaatcgtca ggaacttctt ttcacttcta cgaaaattgc cgaattagaa CD 1901 aatgtaggga tggatctatc tctagtatgt atgtacttac aacagccggt CD 1951 cgcattttat tcaatcaaca attgaaggaa gcaatgcaag gtgtatcaaa CD 2001 gaattctttt tcatacacca cctcatctac gctgagtaca tcaacaatcg CD 2051 ataggtgtaa tactaatagt aataatgagg aatga SQ SEQUENCE 695 AA; MIHRTNYQQL RIGLASPEQI RSWAERELPN GDVIGQVDQP YTLHYKTHKP ERDGLFCERI FGPTKSGVCA CGNCRSVNDE GESSRFCKHC GVEFTDSRVR RYRMGYIKLA CPVTHVWFLK RIPSYIANLL AKPLKELESL VYCDLFLARP VAERPALLRL RGLFNYEDRA WRNILPTFFS TQNYEMLRKN EIVTGGDAIR EGLASLDLQS FLNCAYLEWQ ASVKQKPVGI EWEDRTIRRR KDLLIRRIKL AKDFLRTNMK PEWMVLYFIP VLPPELRPIV ELHEGELITS DLNELYRKII YRNNTLREFL SGSEFTPEGL IVCQKRLVQE AVDALIGSGI RGQPMRDIHN RPYKSFSEVI EGKEGRFREN LLGKRVDYSG RSVIVVGPSL SLHQCGLPRE MAIELFQAFV IRNLIGRHLA CNLRAAKCMI RKGNPIIWEV LREVMRGHPV LLNRAPTLHR LGIQAFQPLL IEGRAIRLHP LVCGGFNADF DGDQMAVHVP LSVEAQIEAR LLMFSHLNLL SPATGDPVSV PSQDMLLGLY ALTIESRQGI YRNRHLGFID RVNVYSTKLL HFSSYCDLLR AKESRQVDSH SLLWLRWKID LQIISSKIRE LSSESHYESS GTSFHFYENC RIRKCRDGSI SSMYVLTTAG RILFNQQLKE AMQGVSKNSF SYTTSSTLST STIDRCNTNS NNEE* // ID AY178864_16 STANDARD; PRT; 1072 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpoB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29384.3 FT PROTEIN_NAME : RNA polymerase beta chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 23054 - 26269 FT DIRECTIONS : negative FT EDITING : 43 *(Tga) -> R(Cga) FT EDITING : 44 S(tCt) -> F(tTt) FT EDITING : 72 P(cCa) -> L(cTa) FT EDITING : 77 *(Taa) -> Q(Caa) FT EDITING : 142 A(gCa) -> V(gTa) FT EDITING : 215 A(gCa) -> V(gTa) FT EDITING : 240 *(Tag) -> Q(Cag) FT EDITING : 285 S(tCa) -> L(tTa) FT EDITING : 321 P(cCa) -> L(cTa) FT EDITING : 330 *(Taa) -> Q(Caa) FT EDITING : 540 T(aCg) -> M(aTg) FT EDITING : 729 S(tCa) -> L(tTa) FT EDITING : 759 S(tCa) -> L(tTa) FT EDITING : 787 T(aCt) -> I(aTt) FT EDITING : 879 S(tCa) -> L(tTa) FT EDITING : 905 P(cCt) -> L(cTt) FT EDITING : 994 S(tCg) -> L(tTg) FT EDITING : 1049 R(Cgt) -> C(Tgt) FT EDITING : 1060 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 3216 NT; CD 1 atgcccgtac tgccagaact tgcacaaatt caatttaaag gttttagtcg CD 51 tttcgttcat caaaaattgc ttaaggaact tgaaaatttc ccaaaaattg CD 101 aagatacaga taaggaagta gaattcTgat Ctattggaaa tcagtaccaa CD 151 ttgacagaac cttctctcga agagagagat gccgcgtatc aatgtattac CD 201 gtattccgct gaccCatatg taccagctTa attgatttgt aaggaagacc CD 251 aaatagtgca agaggaagat gtacgactcg gatctattcc ttggatgaat CD 301 tccggaggaa catttattat taatgggatc gctagagttt tagtcagtca CD 351 aatattgagg agtcctggta tttactacaa tcgggagtcg gatcagagag CD 401 ggattctcgc gtataccagc accgCaattt cagatcaggg agggagattt CD 451 aagctagaga tagacgggag gaatagaata tgggttcgta taagcaagaa CD 501 aaaaaaaata tctattttta ttctactagt agctatgggg ttatgcaaaa CD 551 gagatattct acaaaactcc cgttacccaa ggattttttc aaatatgttc CD 601 aaaaggcaaa aagaaagtat tgaatctcca gaggatgcca tagCagagct CD 651 gtacaaacac ctatactctg ctacagacgc agatgtattc ttttcggaat CD 701 ccatatttag ggaattaTag aagaggtttt tccaacatag atgcgaatta CD 751 ggacgaattg gtagacgaaa cctaaacatc aagctaactc ttgatgtacc CD 801 cgaaacggag tcttttttgc taccccaaga catattagca gctgcagatc CD 851 actCagtaga aataagttac ggagagggca aactcgacga tatagatcat CD 901 ttgaaaaatc gacgtgttcg atccgttgca gatttgcttc aggaacaatt CD 951 gaaattagct cCaaaccgtt tggagaattt gattcgaTaa aatttatcta CD 1001 gagccgttag gcgcaaacgc gcaatcactc cccgggggtt ggtgacaccc CD 1051 gtgccagtaa tagcagcttt caaggagttt tttggttcac accccctttc CD 1101 gcaatttttg gaccaaacaa atccattatc tgaaatggtt cataaacgaa CD 1151 gattaagctc tgtaggtccc ggcgggttaa cacgtcgaac cgctagtttt CD 1201 caagctagag atattcattt cagtcattat ggtcgcatct gcccaatcga CD 1251 aacatcggaa ggtatgaatg ctggcctgat ttcctcatta gctattcagg CD 1301 caggagttaa cacttcggga tctttgggga gcccttacct cgaaatgtca CD 1351 gattcgtctg gggaggagca gttagtcaat ttatcacccg cagaagatga CD 1401 ttattaccga gtagcaagtg agaatttact attatccgaa tggagaggtt CD 1451 cggagaagga aattatacca gtgcgatatc aacaagagtt tctcagcgtt CD 1501 ctctgggaac aagttgattt tcgaagtatt catcctctcc atcatttttc CD 1551 catcggagct tctctcattc cattcattga acataatgat gcaaaccgtg CD 1601 ctttgatggg ttctaccaCg caacgtcaag ctgttccatt aattaagccc CD 1651 gaaagatgca ttgtaggaac tgggttggaa agtcaagtag ctttggattc CD 1701 gggaagtgta gctatatccg aacaggatgg taaagtttgc tatattgatg CD 1751 gtaatagaat tgagctatct cttatccacg aagcgaaaaa gaacaaattg CD 1801 gctcaaccta ctacaattga ggaattaaaa atatttgagc gttccaataa CD 1851 taacacctgc atgcaccaaa aacccgcggt ttcgctggga gaactcctga CD 1901 gaggcggaga aatcgtagcg gatggagcag cgactgtcag gggggaacta CD 1951 gctctgggta aaaatatatt agtagcctac atgccgtggg aaggatacaa CD 2001 cttcgaagat gcggtcttga ttagtgaacg ccttatctat gaagatattt CD 2051 tcacatctct tcacatcgaa aaacatgagg ttgaaatttg tgcaacaaat CD 2101 caaggacctg agcgggttac caagcaaata tctcaattgg atggttattt CD 2151 acttcgacac ctcgacgacg atgggctcgt agaatCagga tcttgggtgg CD 2201 aggccggaga cgttttggta ggtaaactga cgcctcagga gggggcaagc CD 2251 tcatcacgtg ttccagaagg aagatCatta caagctattt ttggtataca CD 2301 actggttaat gcaagagaaa gttgtctaag agtacctatt ggtgggagag CD 2351 gtcgagtcaC tgatgtgagg tgggtatacc ccgaagatga tgctacaaat CD 2401 gatttggaag taattcatat atatatattg caaagacgta agatacaagt CD 2451 gggtgacaag atagccggta ggcatggaaa taaaggtatt gtatcaaaga CD 2501 tagtacccag gcaagatatg ccctatttgc aaaatggtac gccggttgat CD 2551 atgatactaa gtcccttggg agtaccttca cgaatgaatg tgggacagat CD 2601 tttcgaatgc ttgcttgggt tagccgggga gttttCagaa actcattacc CD 2651 gtgtagtacc ctttgatgaa agatatgaac gggaagcttc cagaaaacta CD 2701 gtatttgccg aacCtcacga agcgggtgcg cggaccaata atccgtggct CD 2751 attcgaaccc agccaccctg gaaagagtcg attgatcgat ggacgaacgg CD 2801 gtgatccctt tggacaatct attacaactg ggaaagctta tataatgaaa CD 2851 cttattcatc aggttgatga taagattcac gcacgatcta gtggtcccta CD 2901 cgcgctcgtt acacagcaac ctctcaaggg gaaatcgaga cgggggggac CD 2951 aacgaattgg agaaatggaa gtctgggctt Cggaggggtt tggggtgtcc CD 3001 tacaccttgc aggaaatgct tacaactaaa tcagatcata ttcaggctcg CD 3051 ctacaaagca cttagtgcaa ttatgaccgg aaaaccagtt tgcaaaccta CD 3101 aaaccgttcc agagtctttc cgattgctag ttcgggagtt acgaCgtatg CD 3151 ggcctaaatt tggaacgcaa tttcataCct gaagaagatt tgggaaggga CD 3201 atttgaaaac atttga FT EDITED CDNA CD 1 atgcccgtac tgccagaact tgcacaaatt caatttaaag gttttagtcg CD 51 tttcgttcat caaaaattgc ttaaggaact tgaaaatttc ccaaaaattg CD 101 aagatacaga taaggaagta gaattcCgat Ttattggaaa tcagtaccaa CD 151 ttgacagaac cttctctcga agagagagat gccgcgtatc aatgtattac CD 201 gtattccgct gaccTatatg taccagctCa attgatttgt aaggaagacc CD 251 aaatagtgca agaggaagat gtacgactcg gatctattcc ttggatgaat CD 301 tccggaggaa catttattat taatgggatc gctagagttt tagtcagtca CD 351 aatattgagg agtcctggta tttactacaa tcgggagtcg gatcagagag CD 401 ggattctcgc gtataccagc accgTaattt cagatcaggg agggagattt CD 451 aagctagaga tagacgggag gaatagaata tgggttcgta taagcaagaa CD 501 aaaaaaaata tctattttta ttctactagt agctatgggg ttatgcaaaa CD 551 gagatattct acaaaactcc cgttacccaa ggattttttc aaatatgttc CD 601 aaaaggcaaa aagaaagtat tgaatctcca gaggatgcca tagTagagct CD 651 gtacaaacac ctatactctg ctacagacgc agatgtattc ttttcggaat CD 701 ccatatttag ggaattaCag aagaggtttt tccaacatag atgcgaatta CD 751 ggacgaattg gtagacgaaa cctaaacatc aagctaactc ttgatgtacc CD 801 cgaaacggag tcttttttgc taccccaaga catattagca gctgcagatc CD 851 actTagtaga aataagttac ggagagggca aactcgacga tatagatcat CD 901 ttgaaaaatc gacgtgttcg atccgttgca gatttgcttc aggaacaatt CD 951 gaaattagct cTaaaccgtt tggagaattt gattcgaCaa aatttatcta CD 1001 gagccgttag gcgcaaacgc gcaatcactc cccgggggtt ggtgacaccc CD 1051 gtgccagtaa tagcagcttt caaggagttt tttggttcac accccctttc CD 1101 gcaatttttg gaccaaacaa atccattatc tgaaatggtt cataaacgaa CD 1151 gattaagctc tgtaggtccc ggcgggttaa cacgtcgaac cgctagtttt CD 1201 caagctagag atattcattt cagtcattat ggtcgcatct gcccaatcga CD 1251 aacatcggaa ggtatgaatg ctggcctgat ttcctcatta gctattcagg CD 1301 caggagttaa cacttcggga tctttgggga gcccttacct cgaaatgtca CD 1351 gattcgtctg gggaggagca gttagtcaat ttatcacccg cagaagatga CD 1401 ttattaccga gtagcaagtg agaatttact attatccgaa tggagaggtt CD 1451 cggagaagga aattatacca gtgcgatatc aacaagagtt tctcagcgtt CD 1501 ctctgggaac aagttgattt tcgaagtatt catcctctcc atcatttttc CD 1551 catcggagct tctctcattc cattcattga acataatgat gcaaaccgtg CD 1601 ctttgatggg ttctaccaTg caacgtcaag ctgttccatt aattaagccc CD 1651 gaaagatgca ttgtaggaac tgggttggaa agtcaagtag ctttggattc CD 1701 gggaagtgta gctatatccg aacaggatgg taaagtttgc tatattgatg CD 1751 gtaatagaat tgagctatct cttatccacg aagcgaaaaa gaacaaattg CD 1801 gctcaaccta ctacaattga ggaattaaaa atatttgagc gttccaataa CD 1851 taacacctgc atgcaccaaa aacccgcggt ttcgctggga gaactcctga CD 1901 gaggcggaga aatcgtagcg gatggagcag cgactgtcag gggggaacta CD 1951 gctctgggta aaaatatatt agtagcctac atgccgtggg aaggatacaa CD 2001 cttcgaagat gcggtcttga ttagtgaacg ccttatctat gaagatattt CD 2051 tcacatctct tcacatcgaa aaacatgagg ttgaaatttg tgcaacaaat CD 2101 caaggacctg agcgggttac caagcaaata tctcaattgg atggttattt CD 2151 acttcgacac ctcgacgacg atgggctcgt agaatTagga tcttgggtgg CD 2201 aggccggaga cgttttggta ggtaaactga cgcctcagga gggggcaagc CD 2251 tcatcacgtg ttccagaagg aagatTatta caagctattt ttggtataca CD 2301 actggttaat gcaagagaaa gttgtctaag agtacctatt ggtgggagag CD 2351 gtcgagtcaT tgatgtgagg tgggtatacc ccgaagatga tgctacaaat CD 2401 gatttggaag taattcatat atatatattg caaagacgta agatacaagt CD 2451 gggtgacaag atagccggta ggcatggaaa taaaggtatt gtatcaaaga CD 2501 tagtacccag gcaagatatg ccctatttgc aaaatggtac gccggttgat CD 2551 atgatactaa gtcccttggg agtaccttca cgaatgaatg tgggacagat CD 2601 tttcgaatgc ttgcttgggt tagccgggga gttttTagaa actcattacc CD 2651 gtgtagtacc ctttgatgaa agatatgaac gggaagcttc cagaaaacta CD 2701 gtatttgccg aacTtcacga agcgggtgcg cggaccaata atccgtggct CD 2751 attcgaaccc agccaccctg gaaagagtcg attgatcgat ggacgaacgg CD 2801 gtgatccctt tggacaatct attacaactg ggaaagctta tataatgaaa CD 2851 cttattcatc aggttgatga taagattcac gcacgatcta gtggtcccta CD 2901 cgcgctcgtt acacagcaac ctctcaaggg gaaatcgaga cgggggggac CD 2951 aacgaattgg agaaatggaa gtctgggctt Tggaggggtt tggggtgtcc CD 3001 tacaccttgc aggaaatgct tacaactaaa tcagatcata ttcaggctcg CD 3051 ctacaaagca cttagtgcaa ttatgaccgg aaaaccagtt tgcaaaccta CD 3101 aaaccgttcc agagtctttc cgattgctag ttcgggagtt acgaTgtatg CD 3151 ggcctaaatt tggaacgcaa tttcataTct gaagaagatt tgggaaggga CD 3201 atttgaaaac atttga SQ SEQUENCE 1072 AA; MPVLPELAQI QFKGFSRFVH QKLLKELENF PKIEDTDKEV EFRFIGNQYQ LTEPSLEERD AAYQCITYSA DLYVPAQLIC KEDQIVQEED VRLGSIPWMN SGGTFIINGI ARVLVSQILR SPGIYYNRES DQRGILAYTS TVISDQGGRF KLEIDGRNRI WVRISKKKKI SIFILLVAMG LCKRDILQNS RYPRIFSNMF KRQKESIESP EDAIVELYKH LYSATDADVF FSESIFRELQ KRFFQHRCEL GRIGRRNLNI KLTLDVPETE SFLLPQDILA AADHLVEISY GEGKLDDIDH LKNRRVRSVA DLLQEQLKLA LNRLENLIRQ NLSRAVRRKR AITPRGLVTP VPVIAAFKEF FGSHPLSQFL DQTNPLSEMV HKRRLSSVGP GGLTRRTASF QARDIHFSHY GRICPIETSE GMNAGLISSL AIQAGVNTSG SLGSPYLEMS DSSGEEQLVN LSPAEDDYYR VASENLLLSE WRGSEKEIIP VRYQQEFLSV LWEQVDFRSI HPLHHFSIGA SLIPFIEHND ANRALMGSTM QRQAVPLIKP ERCIVGTGLE SQVALDSGSV AISEQDGKVC YIDGNRIELS LIHEAKKNKL AQPTTIEELK IFERSNNNTC MHQKPAVSLG ELLRGGEIVA DGAATVRGEL ALGKNILVAY MPWEGYNFED AVLISERLIY EDIFTSLHIE KHEVEICATN QGPERVTKQI SQLDGYLLRH LDDDGLVELG SWVEAGDVLV GKLTPQEGAS SSRVPEGRLL QAIFGIQLVN ARESCLRVPI GGRGRVIDVR WVYPEDDATN DLEVIHIYIL QRRKIQVGDK IAGRHGNKGI VSKIVPRQDM PYLQNGTPVD MILSPLGVPS RMNVGQIFEC LLGLAGEFLE THYRVVPFDE RYEREASRKL VFAELHEAGA RTNNPWLFEP SHPGKSRLID GRTGDPFGQS ITTGKAYIMK LIHQVDDKIH ARSSGPYALV TQQPLKGKSR RGGQRIGEME VWALEGFGVS YTLQEMLTTK SDHIQARYKA LSAIMTGKPV CKPKTVPESF RLLVRELRCM GLNLERNFIS EEDLGREFEN I* // ID AY178864_17 STANDARD; PRT; 36 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbM FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29385.2 FT PROTEIN_NAME : photosystem II M protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 28136 - 28243 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 108 NT; CD 1 aCggaagtaa acattcttgc gtttgtagcc actgcacttt tcattctaat CD 51 tccgacagct tttctactca ttctttacat tcagacggcc gcccaaaata CD 101 atgggtag FT EDITED CDNA CD 1 aTggaagtaa acattcttgc gtttgtagcc actgcacttt tcattctaat CD 51 tccgacagct tttctactca ttctttacat tcagacggcc gcccaaaata CD 101 atgggtag SQ SEQUENCE 36 AA; MEVNILAFVA TALFILIPTA FLLILYIQTA AQNNG* // ID AY178864_18 STANDARD; PRT; 30 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : petN FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29386.2 FT PROTEIN_NAME : cytochrome b6/f complex subunit VIII FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 29157 - 29246 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 12 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 90 NT; CD 1 aCggattcag tcactatagc ttgggctgcc ttgaCggcaa tttctacgtt CD 51 ttccctctcg cttgtagttc ggggaagaag tgggttgtga FT EDITED CDNA CD 1 aTggattcag tcactatagc ttgggctgcc ttgaTggcaa tttctacgtt CD 51 ttccctctcg cttgtagttc ggggaagaag tgggttgtga SQ SEQUENCE 30 AA; MDSVTIAWAA LMAISTFSLS LVVRGRSGL* // ID AY178864_19 STANDARD; PRT; 63 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbZ FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29387.1 FT PROTEIN_NAME : Z protein of photosystem II FT EVIDENCE : FT EXCEPTION : FT REGIONS : 30407 - 30595 FT DIRECTIONS : negative FT EDITING : 57 P(ccC) -> P(ccT) FT CODON_START : 1 CL CDNALEN 189 NT; CD 1 atgactactg cttttcaatt tgctttattt gcattaattg ctacctcatt CD 51 tttactagtt gttggtgtgc ctgtggcgtt tgcgtctccc ggaggatggt CD 101 ctgacaacaa aaatattgtt ttttcagggg cctcattatg gattggatta CD 151 gtttttttgg taggtatacc Caattccttc atctcctaa FT EDITED CDNA CD 1 atgactactg cttttcaatt tgctttattt gcattaattg ctacctcatt CD 51 tttactagtt gttggtgtgc ctgtggcgtt tgcgtctccc ggaggatggt CD 101 ctgacaacaa aaatattgtt ttttcagggg cctcattatg gattggatta CD 151 gtttttttgg taggtatacc Taattccttc atctcctaa SQ SEQUENCE 63 AA; MTTAFQFALF ALIATSFLLV VGVPVAFASP GGWSDNKNIV FSGASLWIGL VFLVGIPNSF IS* // ID AY178864_22 STANDARD; PRT; 101 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps14 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29390.2 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 35484 - 35786 FT DIRECTIONS : negative FT EDITING : 83 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atggcaaaaa aaagtcttat tgaaaaggag aatagtaaga aaaaattggt CD 51 gaaaaaatat aatcttcttc gccaattttt gagacgagag attaagaata CD 101 gtttgcggat ccaggataaa ctaattattt ccgaaaaatt gcaatctcta CD 151 ccacgcaaca gtgcacgcgt tcgtctccgt aaccggtgct ccctaaccgg CD 201 acgacccaga tccaattatc gagattttgg tttttccaga cacgtacCcc CD 251 gcgagatggc acacacctgt gtcttgcctg gagtgttgaa atcgagttgg CD 301 tag FT EDITED CDNA CD 1 atggcaaaaa aaagtcttat tgaaaaggag aatagtaaga aaaaattggt CD 51 gaaaaaatat aatcttcttc gccaattttt gagacgagag attaagaata CD 101 gtttgcggat ccaggataaa ctaattattt ccgaaaaatt gcaatctcta CD 151 ccacgcaaca gtgcacgcgt tcgtctccgt aaccggtgct ccctaaccgg CD 201 acgacccaga tccaattatc gagattttgg tttttccaga cacgtacTcc CD 251 gcgagatggc acacacctgt gtcttgcctg gagtgttgaa atcgagttgg CD 301 tag SQ SEQUENCE 101 AA; MAKKSLIEKE NSKKKLVKKY NLLRQFLRRE IKNSLRIQDK LIISEKLQSL PRNSARVRLR NRCSLTGRPR SNYRDFGFSR HVLREMAHTC VLPGVLKSSW * // ID AY178864_23 STANDARD; PRT; 735 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psaB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29391.2 FT PROTEIN_NAME : photosystem I P700 apoprotein A2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 35920 - 38124 FT DIRECTIONS : negative FT EDITING : 255 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 2205 NT; CD 1 atggtatcaa gatttccaaa gttcagccag ggtctatccc aggacccaac CD 51 tactcgtcgt atctggtttg gcatagccac tgcgcatgat tttgaaagtc CD 101 atgacgatac taccgaagaa cgtctctatc aaaaaatatt tgcatctcac CD 151 tttggtcagt tagctattat ttttctatgg acctctggga atttgttcca CD 201 cgtagcttgg cagggcaact ttgaaacatg ggtacaggac ccattacatg CD 251 tcaggccgat tgcccatgcc atttgggatc ctcattttgg tcaaccggcg CD 301 gtcgaagcct atacccgggg ggggtccgcg ggcccggtca atattgccta CD 351 ttccggcgta tatcagtggt ggtacactat tggtttacgc aataacgaag CD 401 atctctacac cggagccatt tttctgctag ctgttgctgc tttgttccta CD 451 ctagctagct ggttacacct ccaacccaaa tggaaaccaa gcatctcctg CD 501 gttcaaaaat gctgaatctc gtcttaatca tcacctatca ggattatttg CD 551 gagtgagttc cctagcttgg acaggccact tgattcatgt agctattccc CD 601 gaagcaaggg gcgggcatgt cagatggaac gatttattga ctactgcccc CD 651 gcatccccag gggttgggac cttttttttc gggtcaatgg agcgtttact CD 701 cgcaaaatcc tgactctaac acccatttgt tcaatagcaa ccaaggagca CD 751 ggaacagcta ttcCaacttt tctgggggga ttccatccac aaactcaaag CD 801 tttgtggcta actgatatgg ctcatcacca cctagcaata gccgtcgtgt CD 851 ttataattgc cggccatatg tacagaacta actttggtat tggacacagc CD 901 atgaaagaaa ttttggatgc tcacattccc ccgggaggta agctgggacg CD 951 tggacaccgg ggactttatg atacggtgaa taattctctc cacttccaat CD 1001 taggacttgc tttagctgct ttgggagtca tcacctccct tgttgcacaa CD 1051 catatgtatt ccttacccgc ctatgctttt ctagcgcagg attatacgac CD 1101 ccaagcagca ctatatactc accaccaata cattgccggg tttatcatgg CD 1151 caggagcttt tgcacatgga gccatcttct ttcttagaga ttatgatccc CD 1201 gagcagaata gagataatgt gttggcaaga atgttagagc acaaagaagc CD 1251 aattatatct cacctaagtt gggctagttt atttctgggt tttcatacgt CD 1301 taggtcttta tgttcataac gatgtaatgc tagccttcgg gactccggaa CD 1351 aaacagattc ttattgaacc cgtatttgct cagtggattc aatctgctca CD 1401 tggtaaagtt tcatacggtt ttgacgtgct tctatcttca gtagatagtc CD 1451 cggcaagtaa tgctggtcgg ggcttgtggt tacctggctg gttagacgct CD 1501 gttaacagta gcaataattc gttattttta acgattggtc ccggggattt CD 1551 tctcgttcac cacgccattg ctttaggttt acacaccact acactaattt CD 1601 tggtgaaagg tgctttagat gcacgcgggt ccaagttgat gccggataag CD 1651 aaagaatttg gttatagttt tccttgcgat ggccccggcc gagggggaac CD 1701 ttgcgacatt tctgcctggg atgctttcta cttagctgtc ttttggatgc CD 1751 tgaacacaat tggatgggtt accttctatt ggcactggaa acacatcact CD 1801 ttatggcagg gcaatgctgc tcaattcaac gaatcttcta cgtatctaat CD 1851 gggatggcta agagattatt tatggctaaa ttcctcgcag cttattaatg CD 1901 gctataaccc ctttggtatg aacagcttat ctgtgtgggc atggatgttt CD 1951 ttgtttgggc atctcgtgtg ggctaccggg tttatgtttt tgatttcgtg CD 2001 gcgcggttac tggcaagaac tcatcgaaac tttagcttgg gctcatgaaa CD 2051 gaacgcctct tgcaaatatg atacggtgga aagataaacc ggttgccctt CD 2101 tctatcgttc aagcgcgact ggttggatta gcgcacttct ccgtgggtta CD 2151 tatatttacc tacgcagctt tcttgatagc atctacatca ggtaaatttg CD 2201 gctag FT EDITED CDNA CD 1 atggtatcaa gatttccaaa gttcagccag ggtctatccc aggacccaac CD 51 tactcgtcgt atctggtttg gcatagccac tgcgcatgat tttgaaagtc CD 101 atgacgatac taccgaagaa cgtctctatc aaaaaatatt tgcatctcac CD 151 tttggtcagt tagctattat ttttctatgg acctctggga atttgttcca CD 201 cgtagcttgg cagggcaact ttgaaacatg ggtacaggac ccattacatg CD 251 tcaggccgat tgcccatgcc atttgggatc ctcattttgg tcaaccggcg CD 301 gtcgaagcct atacccgggg ggggtccgcg ggcccggtca atattgccta CD 351 ttccggcgta tatcagtggt ggtacactat tggtttacgc aataacgaag CD 401 atctctacac cggagccatt tttctgctag ctgttgctgc tttgttccta CD 451 ctagctagct ggttacacct ccaacccaaa tggaaaccaa gcatctcctg CD 501 gttcaaaaat gctgaatctc gtcttaatca tcacctatca ggattatttg CD 551 gagtgagttc cctagcttgg acaggccact tgattcatgt agctattccc CD 601 gaagcaaggg gcgggcatgt cagatggaac gatttattga ctactgcccc CD 651 gcatccccag gggttgggac cttttttttc gggtcaatgg agcgtttact CD 701 cgcaaaatcc tgactctaac acccatttgt tcaatagcaa ccaaggagca CD 751 ggaacagcta ttcTaacttt tctgggggga ttccatccac aaactcaaag CD 801 tttgtggcta actgatatgg ctcatcacca cctagcaata gccgtcgtgt CD 851 ttataattgc cggccatatg tacagaacta actttggtat tggacacagc CD 901 atgaaagaaa ttttggatgc tcacattccc ccgggaggta agctgggacg CD 951 tggacaccgg ggactttatg atacggtgaa taattctctc cacttccaat CD 1001 taggacttgc tttagctgct ttgggagtca tcacctccct tgttgcacaa CD 1051 catatgtatt ccttacccgc ctatgctttt ctagcgcagg attatacgac CD 1101 ccaagcagca ctatatactc accaccaata cattgccggg tttatcatgg CD 1151 caggagcttt tgcacatgga gccatcttct ttcttagaga ttatgatccc CD 1201 gagcagaata gagataatgt gttggcaaga atgttagagc acaaagaagc CD 1251 aattatatct cacctaagtt gggctagttt atttctgggt tttcatacgt CD 1301 taggtcttta tgttcataac gatgtaatgc tagccttcgg gactccggaa CD 1351 aaacagattc ttattgaacc cgtatttgct cagtggattc aatctgctca CD 1401 tggtaaagtt tcatacggtt ttgacgtgct tctatcttca gtagatagtc CD 1451 cggcaagtaa tgctggtcgg ggcttgtggt tacctggctg gttagacgct CD 1501 gttaacagta gcaataattc gttattttta acgattggtc ccggggattt CD 1551 tctcgttcac cacgccattg ctttaggttt acacaccact acactaattt CD 1601 tggtgaaagg tgctttagat gcacgcgggt ccaagttgat gccggataag CD 1651 aaagaatttg gttatagttt tccttgcgat ggccccggcc gagggggaac CD 1701 ttgcgacatt tctgcctggg atgctttcta cttagctgtc ttttggatgc CD 1751 tgaacacaat tggatgggtt accttctatt ggcactggaa acacatcact CD 1801 ttatggcagg gcaatgctgc tcaattcaac gaatcttcta cgtatctaat CD 1851 gggatggcta agagattatt tatggctaaa ttcctcgcag cttattaatg CD 1901 gctataaccc ctttggtatg aacagcttat ctgtgtgggc atggatgttt CD 1951 ttgtttgggc atctcgtgtg ggctaccggg tttatgtttt tgatttcgtg CD 2001 gcgcggttac tggcaagaac tcatcgaaac tttagcttgg gctcatgaaa CD 2051 gaacgcctct tgcaaatatg atacggtgga aagataaacc ggttgccctt CD 2101 tctatcgttc aagcgcgact ggttggatta gcgcacttct ccgtgggtta CD 2151 tatatttacc tacgcagctt tcttgatagc atctacatca ggtaaatttg CD 2201 gctag SQ SEQUENCE 735 AA; MVSRFPKFSQ GLSQDPTTRR IWFGIATAHD FESHDDTTEE RLYQKIFASH FGQLAIIFLW TSGNLFHVAW QGNFETWVQD PLHVRPIAHA IWDPHFGQPA VEAYTRGGSA GPVNIAYSGV YQWWYTIGLR NNEDLYTGAI FLLAVAALFL LASWLHLQPK WKPSISWFKN AESRLNHHLS GLFGVSSLAW TGHLIHVAIP EARGGHVRWN DLLTTAPHPQ GLGPFFSGQW SVYSQNPDSN THLFNSNQGA GTAILTFLGG FHPQTQSLWL TDMAHHHLAI AVVFIIAGHM YRTNFGIGHS MKEILDAHIP PGGKLGRGHR GLYDTVNNSL HFQLGLALAA LGVITSLVAQ HMYSLPAYAF LAQDYTTQAA LYTHHQYIAG FIMAGAFAHG AIFFLRDYDP EQNRDNVLAR MLEHKEAIIS HLSWASLFLG FHTLGLYVHN DVMLAFGTPE KQILIEPVFA QWIQSAHGKV SYGFDVLLSS VDSPASNAGR GLWLPGWLDA VNSSNNSLFL TIGPGDFLVH HAIALGLHTT TLILVKGALD ARGSKLMPDK KEFGYSFPCD GPGRGGTCDI SAWDAFYLAV FWMLNTIGWV TFYWHWKHIT LWQGNAAQFN ESSTYLMGWL RDYLWLNSSQ LINGYNPFGM NSLSVWAWMF LFGHLVWATG FMFLISWRGY WQELIETLAW AHERTPLANM IRWKDKPVAL SIVQARLVGL AHFSVGYIFT YAAFLIASTS GKFG* // ID AY178864_24 STANDARD; PRT; 751 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psaA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29392.2 FT PROTEIN_NAME : photosystem I P700 apoprotein A1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 38150 - 40402 FT DIRECTIONS : negative FT EDITING : 84 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 2253 NT; CD 1 atgactattc gttcgccaga accagaagtc aaaattatgg tagagaagga CD 51 tcctgtaaaa acttctttcg agaagtgggc tcagcctgga catttcgcaa CD 101 gaaatttagc taagggtccc agtaccacta catggatttg gaacctacac CD 151 gccgatgccc atgattttga tagtcatacc aatgacttgg aggatatatc CD 201 ccgtaagata tttagtgcgc attttggcca actagctatt attttcattC CD 251 ggttgagcgg gatgtatttt catggagccc gtttttccaa ctatgagtca CD 301 tggctgaatg atcccacaca cgtaaaaccc agtgcccaag ttgtttggcc CD 351 aatagtgggt caagaaatac ttaatggaga tgtgggcggg gggtttcagg CD 401 gcgtgcaaat aacgtccgga ttcttccaac tatggcgagc ttccggaata CD 451 actagcgagt tacagctcta ttgcacagcc gtgggtgctt tagtttttgc CD 501 tggattaatg ttttttgctg gttggtttca ctatcacaag gctgctccaa CD 551 aattagcttg gtttcaaaat gtcgaatcca tgttgaatca tcacttggcc CD 601 ggtctattgg gattgggatc gctaggatgg gcgggacatc aaatacacgt CD 651 atcgctccct atcaatcagc tcctagacgc aggtgttgac cccgaagaaa CD 701 taccccttcc tcacgaactc atccttaatc gtgatcttct agctcagacg CD 751 tatccaagtt ttgcaaaagg attaattccg tttttcactt tgaactggtc CD 801 ggaatactcg gattttctaa cttttcgcgg cggattgaac ccgataacag CD 851 ggggtctgtg gttgactgat accgcacatc accatttggc cattgcggtt CD 901 ctctttttgg tagctggtca tatgtacagg acaaattggg gtatcgggca CD 951 tagtacgaag gaaatactag aagctcataa aggacctttc acgggtgagg CD 1001 gacacaaggg tatttacgag attttgacaa gttcatggca cgctcaatta CD 1051 gctattaatc ttgccacttt gggatcctta acaattattg tctctcacca CD 1101 catgtatgct atgccgcctt atccctactt agctaccgac tacgcaacac CD 1151 aactttcttt gtttacacat cacatgtgga tagggggttt cttaatagtg CD 1201 ggagcagctg cacatgcagc tattttcgtg gtaagggatt atgatccaac CD 1251 tactcaatac aacaacctgt tggatcgtgt cattcgtcat cgtgatacaa CD 1301 taatttcaca tcttaactgg gtctgcatct tccttggttt tcatagcttc CD 1351 ggtttgtata ttcacaacga tactatgagt gccttggggc gtcctcaaga CD 1401 tatgttttcg gataccgcta ttcaactgca accaatcttt gcccagtgga CD 1451 tccagaatac tcacgccttg gctcctggat cgactgcacc taacgcaaca CD 1501 gcaggcacca gcttggcctg gggtgggagc gacttagtag cagtggccgg CD 1551 caaggtggcc ttagctccaa ttccattagg caccgcagat tttttggtgc CD 1601 accacatcca cgcattcaca attcatgtta ctgtactaat attattgaaa CD 1651 ggcgtcttat ttgcacgcag ctctcgacta atacccgaca aagcaaatct CD 1701 tggttttcgc tttccttgcg acggccccgg aagggggggc acctgccagg CD 1751 tatctgcttg ggatcacgta ttcttggggc tattttggat gtacaactct CD 1801 atttcagtgg ttatatttca tttcagctgg aagatgcaat cggatgtatg CD 1851 gggaagtgta agtgaacagg gagcagtgag ccacatcact ggaggaaact CD 1901 ttgcacaaag ttcaacgaca atcaatggat ggctgcgaga ttttttgtgg CD 1951 gcacaggctt ctcaagtcat tcagtcatat ggttcttcat tatctgcata CD 2001 tgggcttcta ttcttagggg ctcattttgt ctgggccttt agcttaatgt CD 2051 ttctattcag tggtcgcggc tattggcaag aacttattga atctatagtt CD 2101 tgggctcata acaaattgaa agttgctcct gttacccaac ccagagctct CD 2151 gagtattata cagggacgtg cagtgggagt aactcattac cttctgggtg CD 2201 gaatcgccac aacttgggca ttcttcctgg cgagaatcgt tgcagtggga CD 2251 taa FT EDITED CDNA CD 1 atgactattc gttcgccaga accagaagtc aaaattatgg tagagaagga CD 51 tcctgtaaaa acttctttcg agaagtgggc tcagcctgga catttcgcaa CD 101 gaaatttagc taagggtccc agtaccacta catggatttg gaacctacac CD 151 gccgatgccc atgattttga tagtcatacc aatgacttgg aggatatatc CD 201 ccgtaagata tttagtgcgc attttggcca actagctatt attttcattT CD 251 ggttgagcgg gatgtatttt catggagccc gtttttccaa ctatgagtca CD 301 tggctgaatg atcccacaca cgtaaaaccc agtgcccaag ttgtttggcc CD 351 aatagtgggt caagaaatac ttaatggaga tgtgggcggg gggtttcagg CD 401 gcgtgcaaat aacgtccgga ttcttccaac tatggcgagc ttccggaata CD 451 actagcgagt tacagctcta ttgcacagcc gtgggtgctt tagtttttgc CD 501 tggattaatg ttttttgctg gttggtttca ctatcacaag gctgctccaa CD 551 aattagcttg gtttcaaaat gtcgaatcca tgttgaatca tcacttggcc CD 601 ggtctattgg gattgggatc gctaggatgg gcgggacatc aaatacacgt CD 651 atcgctccct atcaatcagc tcctagacgc aggtgttgac cccgaagaaa CD 701 taccccttcc tcacgaactc atccttaatc gtgatcttct agctcagacg CD 751 tatccaagtt ttgcaaaagg attaattccg tttttcactt tgaactggtc CD 801 ggaatactcg gattttctaa cttttcgcgg cggattgaac ccgataacag CD 851 ggggtctgtg gttgactgat accgcacatc accatttggc cattgcggtt CD 901 ctctttttgg tagctggtca tatgtacagg acaaattggg gtatcgggca CD 951 tagtacgaag gaaatactag aagctcataa aggacctttc acgggtgagg CD 1001 gacacaaggg tatttacgag attttgacaa gttcatggca cgctcaatta CD 1051 gctattaatc ttgccacttt gggatcctta acaattattg tctctcacca CD 1101 catgtatgct atgccgcctt atccctactt agctaccgac tacgcaacac CD 1151 aactttcttt gtttacacat cacatgtgga tagggggttt cttaatagtg CD 1201 ggagcagctg cacatgcagc tattttcgtg gtaagggatt atgatccaac CD 1251 tactcaatac aacaacctgt tggatcgtgt cattcgtcat cgtgatacaa CD 1301 taatttcaca tcttaactgg gtctgcatct tccttggttt tcatagcttc CD 1351 ggtttgtata ttcacaacga tactatgagt gccttggggc gtcctcaaga CD 1401 tatgttttcg gataccgcta ttcaactgca accaatcttt gcccagtgga CD 1451 tccagaatac tcacgccttg gctcctggat cgactgcacc taacgcaaca CD 1501 gcaggcacca gcttggcctg gggtgggagc gacttagtag cagtggccgg CD 1551 caaggtggcc ttagctccaa ttccattagg caccgcagat tttttggtgc CD 1601 accacatcca cgcattcaca attcatgtta ctgtactaat attattgaaa CD 1651 ggcgtcttat ttgcacgcag ctctcgacta atacccgaca aagcaaatct CD 1701 tggttttcgc tttccttgcg acggccccgg aagggggggc acctgccagg CD 1751 tatctgcttg ggatcacgta ttcttggggc tattttggat gtacaactct CD 1801 atttcagtgg ttatatttca tttcagctgg aagatgcaat cggatgtatg CD 1851 gggaagtgta agtgaacagg gagcagtgag ccacatcact ggaggaaact CD 1901 ttgcacaaag ttcaacgaca atcaatggat ggctgcgaga ttttttgtgg CD 1951 gcacaggctt ctcaagtcat tcagtcatat ggttcttcat tatctgcata CD 2001 tgggcttcta ttcttagggg ctcattttgt ctgggccttt agcttaatgt CD 2051 ttctattcag tggtcgcggc tattggcaag aacttattga atctatagtt CD 2101 tgggctcata acaaattgaa agttgctcct gttacccaac ccagagctct CD 2151 gagtattata cagggacgtg cagtgggagt aactcattac cttctgggtg CD 2201 gaatcgccac aacttgggca ttcttcctgg cgagaatcgt tgcagtggga CD 2251 taa SQ SEQUENCE 751 AA; MTIRSPEPEV KIMVEKDPVK TSFEKWAQPG HFARNLAKGP STTTWIWNLH ADAHDFDSHT NDLEDISRKI FSAHFGQLAI IFIWLSGMYF HGARFSNYES WLNDPTHVKP SAQVVWPIVG QEILNGDVGG GFQGVQITSG FFQLWRASGI TSELQLYCTA VGALVFAGLM FFAGWFHYHK AAPKLAWFQN VESMLNHHLA GLLGLGSLGW AGHQIHVSLP INQLLDAGVD PEEIPLPHEL ILNRDLLAQT YPSFAKGLIP FFTLNWSEYS DFLTFRGGLN PITGGLWLTD TAHHHLAIAV LFLVAGHMYR TNWGIGHSTK EILEAHKGPF TGEGHKGIYE ILTSSWHAQL AINLATLGSL TIIVSHHMYA MPPYPYLATD YATQLSLFTH HMWIGGFLIV GAAAHAAIFV VRDYDPTTQY NNLLDRVIRH RDTIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPIF AQWIQNTHAL APGSTAPNAT AGTSLAWGGS DLVAVAGKVA LAPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNS ISVVIFHFSW KMQSDVWGSV SEQGAVSHIT GGNFAQSSTT INGWLRDFLW AQASQVIQSY GSSLSAYGLL FLGAHFVWAF SLMFLFSGRG YWQELIESIV WAHNKLKVAP VTQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIVAVG * // ID AY178864_25 STANDARD; PRT; 184 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ycf3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29393.2 FT PROTEIN_NAME : photosystem I assembly protein ycf3 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 42/2 FT INTRON 119/0 FT EDITING : 36 S(tCt) -> F(tTt) FT EDITING : 55 S(tCg) -> L(tTg) FT EDITING : 75 P(cCc) -> L(cTc) FT EDITING : 76 H(Cac) -> Y(Tac) FT EDITING : 80 P(cCt) -> L(cTt) FT EDITING : 99 S(tCg) -> L(tTg) FT EDITING : 118 H(Cac) -> Y(Tac) FT CODON_START : 1 CL CDNALEN 552 NT; CD 1 atgcctaggt cgcagagaaa tgataatttt attgataaaa ctttcacaat CD 51 tctagcggat attctcatac gaattctacc tactactaag agggagaggg CD 101 aagcttCtat atactacagg gatgggatgt cggcccaatc agagggagaa CD 151 tatgcagaag cttCgggaag ttactacaaa gccatgcgtt tggagattga CD 201 ttcttacgac cgaagttaca tacCcCacaa tataggtcCt attcatacca CD 251 gtaatggtaa ccatgcaaaa gctttggaat actactttca agcgtCggag CD 301 cgtaattcct ttttgccaca agcttttaat aatatggctg tgatctgcca CD 351 cCaccgaggg gaacaggcca tttatcaagg agatttagaa atttcggaag CD 401 cttggtttga tcaggctgct gagtattggc gacgggcaat agcactttcc CD 451 cccgacaatt atgccgaagc acagaattgg ctgaaaatta cgggacgctt CD 501 ctccccgtct catcggtggg agagttggaa caacagtacg agagtagcgt CD 551 ga FT EDITED CDNA CD 1 atgcctaggt cgcagagaaa tgataatttt attgataaaa ctttcacaat CD 51 tctagcggat attctcatac gaattctacc tactactaag agggagaggg CD 101 aagcttTtat atactacagg gatgggatgt cggcccaatc agagggagaa CD 151 tatgcagaag cttTgggaag ttactacaaa gccatgcgtt tggagattga CD 201 ttcttacgac cgaagttaca tacTcTacaa tataggtcTt attcatacca CD 251 gtaatggtaa ccatgcaaaa gctttggaat actactttca agcgtTggag CD 301 cgtaattcct ttttgccaca agcttttaat aatatggctg tgatctgcca CD 351 cTaccgaggg gaacaggcca tttatcaagg agatttagaa atttcggaag CD 401 cttggtttga tcaggctgct gagtattggc gacgggcaat agcactttcc CD 451 cccgacaatt atgccgaagc acagaattgg ctgaaaatta cgggacgctt CD 501 ctccccgtct catcggtggg agagttggaa caacagtacg agagtagcgt CD 551 ga SQ SEQUENCE 184 AA; MPRSQRNDNF IDKTFTILAD ILIRILPTTK REREAFIYYR DGMSAQSEGE YAEALGSYYK AMRLEIDSYD RSYILYNIGL IHTSNGNHAK ALEYYFQALE RNSFLPQAFN NMAVICHYRG EQAIYQGDLE ISEAWFDQAA EYWRRAIALS PDNYAEAQNW LKITGRFSPS HRWESWNNST RVA* // ID AY178864_26 STANDARD; PRT; 198 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29394.2 FT PROTEIN_NAME : ribosomal protein S4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 43446 - 44039 FT DIRECTIONS : negative FT EDITING : 78 P(cCg) -> L(cTg) FT EDITING : 143 P(cCg) -> L(cTg) FT EDITING : 180 V(gtC) -> V(gtT) FT CODON_START : 1 CL CDNALEN 594 NT; CD 1 atgcgtcgtc taaaaaattt gccaggactt acgggtacgg gtaagagtaa CD 51 tacgtctaac ttgggggaat ttcgacttgc tgttgaccaa tcaacgtcga CD 101 gaaagatttc tcaattctgc gtgcgtttgg aagccaaaca gagattacgt CD 151 cttaactatg gattgacaga acgccaatta ctaagatatg ttcgcattgc CD 201 tagaagaact aggggttcga caggtcaagt tcCgttgcaa ctgcttgaga CD 251 tgcgtctgga taatattatt tttcagttag gcatggcttc cacaattccc CD 301 gctgcccgac agctggtttg tcacagacat attttggtaa accatcgcgt CD 351 tgtggatata ccaagctatc gatgtaaacc tagggatatt atcagtattc CD 401 ggaaccgacc aacttctgcc aatgctcCga agagtgagtc tctcagtggg CD 451 aacgaagtac cagatcacct aactctgtct atttcgaaaa cgggtgaacc CD 501 aacgggatta gtcaaccatc tggtcaaccg ggaatccgtC aatttggata CD 551 tcaatgaatt gttagttgtt gagtattact ctcgaaaagc ttag FT EDITED CDNA CD 1 atgcgtcgtc taaaaaattt gccaggactt acgggtacgg gtaagagtaa CD 51 tacgtctaac ttgggggaat ttcgacttgc tgttgaccaa tcaacgtcga CD 101 gaaagatttc tcaattctgc gtgcgtttgg aagccaaaca gagattacgt CD 151 cttaactatg gattgacaga acgccaatta ctaagatatg ttcgcattgc CD 201 tagaagaact aggggttcga caggtcaagt tcTgttgcaa ctgcttgaga CD 251 tgcgtctgga taatattatt tttcagttag gcatggcttc cacaattccc CD 301 gctgcccgac agctggtttg tcacagacat attttggtaa accatcgcgt CD 351 tgtggatata ccaagctatc gatgtaaacc tagggatatt atcagtattc CD 401 ggaaccgacc aacttctgcc aatgctcTga agagtgagtc tctcagtggg CD 451 aacgaagtac cagatcacct aactctgtct atttcgaaaa cgggtgaacc CD 501 aacgggatta gtcaaccatc tggtcaaccg ggaatccgtT aatttggata CD 551 tcaatgaatt gttagttgtt gagtattact ctcgaaaagc ttag SQ SEQUENCE 198 AA; MRRLKNLPGL TGTGKSNTSN LGEFRLAVDQ STSRKISQFC VRLEAKQRLR LNYGLTERQL LRYVRIARRT RGSTGQVLLQ LLEMRLDNII FQLGMASTIP AARQLVCHRH ILVNHRVVDI PSYRCKPRDI ISIRNRPTSA NALKSESLSG NEVPDHLTLS ISKTGEPTGL VNHLVNRESV NLDINELLVV EYYSRKA* // ID AY178864_27 STANDARD; PRT; 171 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhJ FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29395.2 FT PROTEIN_NAME : NADH dehydrogenase subunit J FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 46014 - 46526 FT DIRECTIONS : negative FT EDITING : 55 P(cCa) -> L(cTa) FT EDITING : 98 A(gCa) -> V(gTa) FT CODON_START : 1 CL CDNALEN 513 NT; CD 1 atgaacaccg ttgataaaga gaagtttaat ctaaaaacgc gaggtcgatt CD 51 atctgcctgg ttaaccaaac acaatttctc acatcgacct ttgggttacg CD 101 actacagagg tgtcgagatt ttggaagtca agtcggaaga gtggttgtct CD 151 acagctgttg cccCatatgc ttacggattc aactatctac ggtctcaatg CD 201 tgcttacgac gcaacgccgg gggggtctct agttagtgtg tatcacttga CD 251 ctcagatgca agaccagtcg gatcaacccg aggaaatatg tgCaaaagtc CD 301 tttgtttcaa gaacaaatcc tcaaatacct tcggtttatt gggtttggaa CD 351 aagtgccgaa ttccaggaac gtgaatctta tgacatgtta ggaataattt CD 401 atcaaggaca tccgtacctt aggcgtatac taatgcctga aagttggatt CD 451 ggctggccgc tccgtaagga ttacgtggta cccaatttct acgagttaca CD 501 agatgcctac taa FT EDITED CDNA CD 1 atgaacaccg ttgataaaga gaagtttaat ctaaaaacgc gaggtcgatt CD 51 atctgcctgg ttaaccaaac acaatttctc acatcgacct ttgggttacg CD 101 actacagagg tgtcgagatt ttggaagtca agtcggaaga gtggttgtct CD 151 acagctgttg cccTatatgc ttacggattc aactatctac ggtctcaatg CD 201 tgcttacgac gcaacgccgg gggggtctct agttagtgtg tatcacttga CD 251 ctcagatgca agaccagtcg gatcaacccg aggaaatatg tgTaaaagtc CD 301 tttgtttcaa gaacaaatcc tcaaatacct tcggtttatt gggtttggaa CD 351 aagtgccgaa ttccaggaac gtgaatctta tgacatgtta ggaataattt CD 401 atcaaggaca tccgtacctt aggcgtatac taatgcctga aagttggatt CD 451 ggctggccgc tccgtaagga ttacgtggta cccaatttct acgagttaca CD 501 agatgcctac taa SQ SEQUENCE 171 AA; MNTVDKEKFN LKTRGRLSAW LTKHNFSHRP LGYDYRGVEI LEVKSEEWLS TAVALYAYGF NYLRSQCAYD ATPGGSLVSV YHLTQMQDQS DQPEEICVKV FVSRTNPQIP SVYWVWKSAE FQERESYDML GIIYQGHPYL RRILMPESWI GWPLRKDYVV PNFYELQDAY * // ID AY178864_28 STANDARD; PRT; 251 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhK FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29396.2 FT PROTEIN_NAME : NADH dehydrogenase subunit K FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 46584 - 47336 FT DIRECTIONS : negative FT EDITING : 69 F(ttC) -> F(ttT) FT EDITING : 113 P(cCg) -> L(cTg) FT EDITING : 159 H(Cat) -> Y(Tat) FT CODON_START : 1 CL CDNALEN 753 NT; CD 1 atggtgttaa cttccgacca tttagataaa aagaacataa ggaaaattga CD 51 atacaaaggt gaagactctt tctcaaattc gatgtcaaag ctgcctcttc CD 101 aggggggtat gtcagactca atttttatgg ctagtattag tgatttttct CD 151 aactggtcca gactctcgag cttatggccc cttttatatg gtaccagttg CD 201 ttgcttCatt gaatttgctt ccctaatagg ttcgcgattt gattttgacc CD 251 ggtatggtct ggtacctaga tctagtccta gacaggcgga tctaattgtc CD 301 accgctggta ccataacaat gaagatggcc ccatctcCga taagacttta CD 351 tgaacaaatg cccgaaccaa agtatgtaat tgctatggga gcttgcacta CD 401 ttacgggagg gatgtttagt acggattcct acagtaccgt tcgcggggta CD 451 gataaattaa ttcctgtcga tattCatttg ccgggttgcc cgcccaaacc CD 501 cgaagctatc atggatgccg taacgaaact ccgcaagaaa attgctcgaa CD 551 acagatttgt gaaccgggcg tctcgcccca tccgaacgaa gtactttagt CD 601 ataagccacc aacttaatct cgtaccgggc acctgtgccg gaaaatacaa CD 651 ttgggataga gaaaattgtg gtacgaaatt ggcgccagcc aatttttcgg CD 701 aaaattgtca aaagtttgca aatgaacacg atgaattaaa atcagcaatt CD 751 taa FT EDITED CDNA CD 1 atggtgttaa cttccgacca tttagataaa aagaacataa ggaaaattga CD 51 atacaaaggt gaagactctt tctcaaattc gatgtcaaag ctgcctcttc CD 101 aggggggtat gtcagactca atttttatgg ctagtattag tgatttttct CD 151 aactggtcca gactctcgag cttatggccc cttttatatg gtaccagttg CD 201 ttgcttTatt gaatttgctt ccctaatagg ttcgcgattt gattttgacc CD 251 ggtatggtct ggtacctaga tctagtccta gacaggcgga tctaattgtc CD 301 accgctggta ccataacaat gaagatggcc ccatctcTga taagacttta CD 351 tgaacaaatg cccgaaccaa agtatgtaat tgctatggga gcttgcacta CD 401 ttacgggagg gatgtttagt acggattcct acagtaccgt tcgcggggta CD 451 gataaattaa ttcctgtcga tattTatttg ccgggttgcc cgcccaaacc CD 501 cgaagctatc atggatgccg taacgaaact ccgcaagaaa attgctcgaa CD 551 acagatttgt gaaccgggcg tctcgcccca tccgaacgaa gtactttagt CD 601 ataagccacc aacttaatct cgtaccgggc acctgtgccg gaaaatacaa CD 651 ttgggataga gaaaattgtg gtacgaaatt ggcgccagcc aatttttcgg CD 701 aaaattgtca aaagtttgca aatgaacacg atgaattaaa atcagcaatt CD 751 taa SQ SEQUENCE 251 AA; MVLTSDHLDK KNIRKIEYKG EDSFSNSMSK LPLQGGMSDS IFMASISDFS NWSRLSSLWP LLYGTSCCFI EFASLIGSRF DFDRYGLVPR SSPRQADLIV TAGTITMKMA PSLIRLYEQM PEPKYVIAMG ACTITGGMFS TDSYSTVRGV DKLIPVDIYL PGCPPKPEAI MDAVTKLRKK IARNRFVNRA SRPIRTKYFS ISHQLNLVPG TCAGKYNWDR ENCGTKLAPA NFSENCQKFA NEHDELKSAI * // ID AY178864_29 STANDARD; PRT; 121 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29397.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 47327 - 47689 FT DIRECTIONS : negative FT EDITING : 11 R(Cgg) -> W(Tgg) FT EDITING : 62 H(Cat) -> Y(Tat) FT EDITING : 72 S(tCc) -> F(tTc) FT EDITING : 97 A(gCa) -> V(gTa) FT EDITING : 117 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 363 NT; CD 1 atgtttttat ctcaccaata tgactctttc Cggatttttc tattagtctg CD 51 tatatctatt ccacttttgg ctttttctat taccaggttt gccgcccccc CD 101 cccgggaggg gccagaaaag tcaacaagtt acgagtcagg tattgaacca CD 151 aagggagaca cttggattcg atttcagata cgtCattaca tgtttgcctt CD 201 ggtatttacg gtctCcgatg tcgaaaccgt atttctttat ccctgggcta CD 251 catctttcga ggaattgggc ttatttgcat tcgtcgaagC aattgtattc CD 301 atatttatac taatcgtcgg cttggtttat gcttggcgaa aaggagcatC CD 351 ggaatggtgt taa FT EDITED CDNA CD 1 atgtttttat ctcaccaata tgactctttc Tggatttttc tattagtctg CD 51 tatatctatt ccacttttgg ctttttctat taccaggttt gccgcccccc CD 101 cccgggaggg gccagaaaag tcaacaagtt acgagtcagg tattgaacca CD 151 aagggagaca cttggattcg atttcagata cgtTattaca tgtttgcctt CD 201 ggtatttacg gtctTcgatg tcgaaaccgt atttctttat ccctgggcta CD 251 catctttcga ggaattgggc ttatttgcat tcgtcgaagT aattgtattc CD 301 atatttatac taatcgtcgg cttggtttat gcttggcgaa aaggagcatT CD 351 ggaatggtgt taa SQ SEQUENCE 121 AA; MFLSHQYDSF WIFLLVCISI PLLAFSITRF AAPPREGPEK STSYESGIEP KGDTWIRFQI RYYMFALVFT VFDVETVFLY PWATSFEELG LFAFVEVIVF IFILIVGLVY AWRKGALEWC * // ID AY178864_30 STANDARD; PRT; 133 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : atpE FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29398.2 FT PROTEIN_NAME : ATP synthase CF1 epsilon chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 49379 - 49777 FT DIRECTIONS : negative FT EDITING : 3 S(tCa) -> L(tTa) FT EDITING : 20 W(Tgg) -> R(Cgg) FT EDITING : 62 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 399 NT; CD 1 atggtatCaa gtctttgtgt aatggctcct aatcgaatag tttggaattc CD 51 tgaggtaTgg gaaattattt tatccaccaa tagtggtcag attggcatac CD 101 tacctaatca tgcacccctc cttgcagctt tggatatggg ggttttaaaa CD 151 atacgtagtg ataagcaatg gtctgcaatg gcacCgatgg gtggcttcgc CD 201 catgatagat aataatcgag tgataatatt agtcaacgag gcagagagag CD 251 ctagcgaaat tgatcctgag gaagctcgaa aaagttttca aacggctcaa CD 301 gccgagttag ctgaagcaga aggcaggaga aagctaatag aagccaactt CD 351 gacatttaaa agagctaaag ccagattgga agcttcaact atcgtttag FT EDITED CDNA CD 1 atggtatTaa gtctttgtgt aatggctcct aatcgaatag tttggaattc CD 51 tgaggtaCgg gaaattattt tatccaccaa tagtggtcag attggcatac CD 101 tacctaatca tgcacccctc cttgcagctt tggatatggg ggttttaaaa CD 151 atacgtagtg ataagcaatg gtctgcaatg gcacTgatgg gtggcttcgc CD 201 catgatagat aataatcgag tgataatatt agtcaacgag gcagagagag CD 251 ctagcgaaat tgatcctgag gaagctcgaa aaagttttca aacggctcaa CD 301 gccgagttag ctgaagcaga aggcaggaga aagctaatag aagccaactt CD 351 gacatttaaa agagctaaag ccagattgga agcttcaact atcgtttag SQ SEQUENCE 133 AA; MVLSLCVMAP NRIVWNSEVR EIILSTNSGQ IGILPNHAPL LAALDMGVLK IRSDKQWSAM ALMGGFAMID NNRVIILVNE AERASEIDPE EARKSFQTAQ AELAEAEGRR KLIEANLTFK RAKARLEAST IV* // ID AY178864_31 STANDARD; PRT; 494 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : atpB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAB51749.3 FT PROTEIN_NAME : ATP synthase CF1 beta chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 49783 - 51264 FT DIRECTIONS : negative FT EDITING : 6 P(cCc) -> L(cTc) FT EDITING : 77 T(aCg) -> M(aTg) FT EDITING : 181 T(aCg) -> M(aTg) FT EDITING : 183 S(tCa) -> L(tTa) FT EDITING : 214 T(aCg) -> M(aTg) FT EDITING : 249 S(tCa) -> L(tTa) FT EDITING : 461 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 1482 NT; CD 1 atgaaaatca gttctcCcct tttcgaaatt tctgaattgg tggaaaaaaa CD 51 cgtgggctac atcacccaga tcattggacc agtattggat gtagcttttt CD 101 cccctgggga aatgcctagc atctacaact cactagtagt caaaggacga CD 151 aactcggcgg gccaggagat taatgttact tgtgaagttc aacaattgtt CD 201 aggtaacaat gaagtaagag ccgtagccaC gagtgccaca gatggtttaa CD 251 tgagaggtat gggcgctgtt gatacgggag ctcctctaag tgttcccgtt CD 301 ggtgaaacta ctctcggccg aatattcaat gtcctcggtg aacccgtaga CD 351 caatttgggt cccgttcaaa atagtgcaac atttccaatt cacagatccg CD 401 ctccggcatt tacccaattg gataccaagc tatcgatttt tgaaacgggg CD 451 attaaagttg tagatctttt ggccccctat cgtcgaggtg gaaaaattgg CD 501 tttatttggc ggagccggag ttgggaagac agttcttatc aCggaatCaa CD 551 tcaacaatat tgcgaaagct catggaggtg tatctgtatt cggcggggtg CD 601 ggggaacgta cacgtgaggg taatgacctc tacatggaaa Cgaaagagtc CD 651 aaaagttatt aatgaacaaa atatatcgga atcaaaagtg gctttggttt CD 701 atggtcagat gaatgaacca ccgggagctc gtatgagagt tggctCaact CD 751 gctctaacaa tggcggaata tttccgagat atcaataagc gagatgtact CD 801 tctgttcatt gacaacattt ttcgcttcgt tcaggcgggg tcggaggtct CD 851 cagcattact tggtagaatg ccttcggccg tgggttatca gccgaccctt CD 901 gggacagaaa tgggatcttt acaggaaaga attacttcta ctaaggaagg CD 951 gtcaataact tccattcaag ctgtttacgt acctgcagat gatctaactg CD 1001 acccagcccc cgctacaaca tttgcacatc tagatgctac aactgtgctt CD 1051 tcgaggggct tagcggcaaa aggtatctat ccggccgtag atccgttaga CD 1101 ttcgacttca actatgttgc agccttggat tgtaggtgag gagcattatg CD 1151 agacggcaca aggggttaag caaactttgc agcgttacaa ggaacttcaa CD 1201 gatattatag ctattctcgg actagacgag ttatccgaag aggaccgttt CD 1251 gactgtagct agagctcgaa aaatagagcg tttcctatca caaccttttt CD 1301 ttgtagcgga agtattcacg ggttctccgg gtaaatatgt tagtttacca CD 1351 gaaacaatta agggatttca aatgattctt Cctggagagt tggataatct CD 1401 ccccgagcaa gctttttatt tagttggcaa tattgatgaa gccgccgcaa CD 1451 aagccgcggc tttgcaagcg gggggtcaat aa FT EDITED CDNA CD 1 atgaaaatca gttctcTcct tttcgaaatt tctgaattgg tggaaaaaaa CD 51 cgtgggctac atcacccaga tcattggacc agtattggat gtagcttttt CD 101 cccctgggga aatgcctagc atctacaact cactagtagt caaaggacga CD 151 aactcggcgg gccaggagat taatgttact tgtgaagttc aacaattgtt CD 201 aggtaacaat gaagtaagag ccgtagccaT gagtgccaca gatggtttaa CD 251 tgagaggtat gggcgctgtt gatacgggag ctcctctaag tgttcccgtt CD 301 ggtgaaacta ctctcggccg aatattcaat gtcctcggtg aacccgtaga CD 351 caatttgggt cccgttcaaa atagtgcaac atttccaatt cacagatccg CD 401 ctccggcatt tacccaattg gataccaagc tatcgatttt tgaaacgggg CD 451 attaaagttg tagatctttt ggccccctat cgtcgaggtg gaaaaattgg CD 501 tttatttggc ggagccggag ttgggaagac agttcttatc aTggaatTaa CD 551 tcaacaatat tgcgaaagct catggaggtg tatctgtatt cggcggggtg CD 601 ggggaacgta cacgtgaggg taatgacctc tacatggaaa Tgaaagagtc CD 651 aaaagttatt aatgaacaaa atatatcgga atcaaaagtg gctttggttt CD 701 atggtcagat gaatgaacca ccgggagctc gtatgagagt tggctTaact CD 751 gctctaacaa tggcggaata tttccgagat atcaataagc gagatgtact CD 801 tctgttcatt gacaacattt ttcgcttcgt tcaggcgggg tcggaggtct CD 851 cagcattact tggtagaatg ccttcggccg tgggttatca gccgaccctt CD 901 gggacagaaa tgggatcttt acaggaaaga attacttcta ctaaggaagg CD 951 gtcaataact tccattcaag ctgtttacgt acctgcagat gatctaactg CD 1001 acccagcccc cgctacaaca tttgcacatc tagatgctac aactgtgctt CD 1051 tcgaggggct tagcggcaaa aggtatctat ccggccgtag atccgttaga CD 1101 ttcgacttca actatgttgc agccttggat tgtaggtgag gagcattatg CD 1151 agacggcaca aggggttaag caaactttgc agcgttacaa ggaacttcaa CD 1201 gatattatag ctattctcgg actagacgag ttatccgaag aggaccgttt CD 1251 gactgtagct agagctcgaa aaatagagcg tttcctatca caaccttttt CD 1301 ttgtagcgga agtattcacg ggttctccgg gtaaatatgt tagtttacca CD 1351 gaaacaatta agggatttca aatgattctt Tctggagagt tggataatct CD 1401 ccccgagcaa gctttttatt tagttggcaa tattgatgaa gccgccgcaa CD 1451 aagccgcggc tttgcaagcg gggggtcaat aa SQ SEQUENCE 494 AA; MKISSLLFEI SELVEKNVGY ITQIIGPVLD VAFSPGEMPS IYNSLVVKGR NSAGQEINVT CEVQQLLGNN EVRAVAMSAT DGLMRGMGAV DTGAPLSVPV GETTLGRIFN VLGEPVDNLG PVQNSATFPI HRSAPAFTQL DTKLSIFETG IKVVDLLAPY RRGGKIGLFG GAGVGKTVLI MELINNIAKA HGGVSVFGGV GERTREGNDL YMEMKESKVI NEQNISESKV ALVYGQMNEP PGARMRVGLT ALTMAEYFRD INKRDVLLFI DNIFRFVQAG SEVSALLGRM PSAVGYQPTL GTEMGSLQER ITSTKEGSIT SIQAVYVPAD DLTDPAPATT FAHLDATTVL SRGLAAKGIY PAVDPLDSTS TMLQPWIVGE EHYETAQGVK QTLQRYKELQ DIIAILGLDE LSEEDRLTVA RARKIERFLS QPFFVAEVFT GSPGKYVSLP ETIKGFQMIL SGELDNLPEQ AFYLVGNIDE AAAKAAALQA GGQ* // ID AY178864_33 STANDARD; PRT; 311 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : accD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29400.2 FT PROTEIN_NAME : acetyl-CoA carboxylase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 53836 - 54768 FT DIRECTIONS : positive FT EDITING : 3 T(aCg) -> M(aTg) FT EDITING : 59 H(Cat) -> Y(Tat) FT EDITING : 63 S(tCg) -> L(tTg) FT EDITING : 73 R(Cgc) -> C(Tgc) FT EDITING : 87 L(ctC) -> L(ctT) FT EDITING : 88 S(tCa) -> L(tTa) FT EDITING : 115 H(Cat) -> Y(Tat) FT EDITING : 139 P(cCg) -> L(cTg) FT EDITING : 146 P(cCt) -> L(cTt) FT EDITING : 180 P(cCa) -> L(cTa) FT EDITING : 184 R(Cgt) -> C(Tgt) FT EDITING : 191 T(aCg) -> M(aTg) FT EDITING : 223 P(cCt) -> L(cTt) FT EDITING : 246 S(Tct) -> P(Cct) FT EDITING : 260 *(Taa) -> Q(Caa) FT EDITING : 284 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 933 NT; CD 1 attgttaCgt ctgtaataaa ttggtttgaa gataggcaaa aatttggtgg CD 51 attaattgga gcttttcttg aagaagctac aagaagctct atgacaaatg CD 101 agagagatag acgaataagc gtcaacgcaa acaagggatt atgggctcgg CD 151 tgtgataact gtggaaatat gcttCatgta aaattttCga aacaaaatag CD 201 aagtgtttgt gaagaaCgcg gttatcatct ttcgatgagt agtatggaaa CD 251 ggatcgaact CtCaattgat cctaacacgt ggattccttt ggatgaagac CD 301 atgtccgcaa gagacatttt aagtttctct gacgaggatt ctCatgaaac CD 351 tcgtatactt ctttcccaag aaaagacagg tttaaccgat gctgttcaaa CD 401 caggtatagg atatcCgaat ggaacactta tagcacCtgg cgttatggac CD 451 ttccatttta tgggaggaag tatgggttcc gtagtgggtg aaaaaattac CD 501 tcgtttaatt gaatatgcca ctcaaaggct tctgccacCa gttttgattC CD 551 gtgcctctgg gggagcgcgt aCgcaggaag ggacgttgag cttgatgcaa CD 601 atggctaaaa tttcttctgt tttgcaactc tatcaggttc aaaataaatt CD 651 gctttacata tccgttcCta cttatccaac cacaggtggt gttactgcca CD 701 gtttcgggat gttgggagat ataattattg ccgaaTctaa agcctatatc CD 751 gcatttgcag gtaagagggt aattgaaTaa acgttgcgcc agaagatacc CD 801 tgacggtttt caagcagctg aatctttatt tgataacggg ctactcgatt CD 851 Caatcgttcc acgtaatctt ctgaagggtg ttttgagcga aatatctggg CD 901 ctttacttat cagttcctta taacaagaat tga FT EDITED CDNA CD 1 attgttaTgt ctgtaataaa ttggtttgaa gataggcaaa aatttggtgg CD 51 attaattgga gcttttcttg aagaagctac aagaagctct atgacaaatg CD 101 agagagatag acgaataagc gtcaacgcaa acaagggatt atgggctcgg CD 151 tgtgataact gtggaaatat gcttTatgta aaattttTga aacaaaatag CD 201 aagtgtttgt gaagaaTgcg gttatcatct ttcgatgagt agtatggaaa CD 251 ggatcgaact TtTaattgat cctaacacgt ggattccttt ggatgaagac CD 301 atgtccgcaa gagacatttt aagtttctct gacgaggatt ctTatgaaac CD 351 tcgtatactt ctttcccaag aaaagacagg tttaaccgat gctgttcaaa CD 401 caggtatagg atatcTgaat ggaacactta tagcacTtgg cgttatggac CD 451 ttccatttta tgggaggaag tatgggttcc gtagtgggtg aaaaaattac CD 501 tcgtttaatt gaatatgcca ctcaaaggct tctgccacTa gttttgattT CD 551 gtgcctctgg gggagcgcgt aTgcaggaag ggacgttgag cttgatgcaa CD 601 atggctaaaa tttcttctgt tttgcaactc tatcaggttc aaaataaatt CD 651 gctttacata tccgttcTta cttatccaac cacaggtggt gttactgcca CD 701 gtttcgggat gttgggagat ataattattg ccgaaCctaa agcctatatc CD 751 gcatttgcag gtaagagggt aattgaaCaa acgttgcgcc agaagatacc CD 801 tgacggtttt caagcagctg aatctttatt tgataacggg ctactcgatt CD 851 Taatcgttcc acgtaatctt ctgaagggtg ttttgagcga aatatctggg CD 901 ctttacttat cagttcctta taacaagaat tga SQ SEQUENCE 311 AA; IVMSVINWFE DRQKFGGLIG AFLEEATRSS MTNERDRRIS VNANKGLWAR CDNCGNMLYV KFLKQNRSVC EECGYHLSMS SMERIELLID PNTWIPLDED MSARDILSFS DEDSYETRIL LSQEKTGLTD AVQTGIGYLN GTLIALGVMD FHFMGGSMGS VVGEKITRLI EYATQRLLPL VLICASGGAR MQEGTLSLMQ MAKISSVLQL YQVQNKLLYI SVLTYPTTGG VTASFGMLGD IIIAEPKAYI AFAGKRVIEQ TLRQKIPDGF QAAESLFDNG LLDLIVPRNL LKGVLSEISG LYLSVPYNKN * // ID AY178864_36 STANDARD; PRT; 465 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ycf10 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29403.2 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 56428 - 57822 FT DIRECTIONS : positive FT EDITING : 303 R(Cgg) -> W(Tgg) FT EDITING : 333 T(aCg) -> M(aTg) FT EDITING : 372 R(Cgg) -> W(Tgg) FT EDITING : 376 S(tCa) -> L(tTa) FT EDITING : 427 R(Cgc) -> C(Tgc) FT CODON_START : 1 CL CDNALEN 1395 NT; CD 1 atggcggcgg gtaattcttc atgggcccga gcagctttta cttttaaagc CD 51 tacggttttc aaaaaatcta gatatgtcat atattacagt cttctggaac CD 101 acagatttag tctatctctt tggggaatac ttaaatattc agggatttat CD 151 ttttgtacgg agatccttcg gtcatttccg aaaaagcgct gcaaatccca CD 201 tccctatcgt gtagacggct atccggcagg aagttgttta gatccgcctc CD 251 tgcatgaacc tctagatact tcaactccca agaagatatc tttagtgtct CD 301 tgttctaatt cttacatgcg taacaaaaca gataatggaa aggtaggatc CD 351 taggaatgta tcggaataca aactcgaagg cgattttgcc tctacaagta CD 401 aatccattta ttacaagtta aataatctgg agaaaatgaa tagaaaatta CD 451 gcttggatcg aagccgtttc gagtgagttt tctttttggg aaaaacttcg CD 501 ttccaaacaa atctttccat ttcaaaatga aaaagatttg attgcagaac CD 551 cgtttaacta cgaattagca gtttctcacc gccgtccagt aatttacgag CD 601 tcaattagtt tggtgcctcg gtctgtaact cgtaccttat ccagattcaa CD 651 ggcggagtta acaaatcaat caaatttaaa tttatcagtc cataataaat CD 701 ttgatttagc taagaaccaa gcctctgttt ccctccaata tgttggattc CD 751 cttctctttc ttttcccgat tcaaattgct atagaaaatt ggtttttgga CD 801 accccggatt aggggttggt ggaacatacg tcaaatccaa ttattttcaa CD 851 acgtgtttca ggaagaaaac gctttgaagc agctccgaga agcagaggca CD 901 ttattcCggt tagacgatgt gattggcaac ttggcagata cgcagttgca CD 951 aaattttgat acggatgcgc gcaacgaaac tactcgatta gcaatgaCgt CD 1001 atgacgagct aaatattcag ctactactgc ggctagcaac caacgcaatt CD 1051 agcattgcca ctttatttcc cctactgata ttcgggcgaa agagactcgc CD 1101 ggttttaaat tccCggattc aagagtCatt ttatagttta aatgacacaa CD 1151 tgaaggcgtt ttccatcctt ctattaactg atttatgtgt agggtttcac CD 1201 tcgccccatg gttgggaaat actagtacag tcccttttcg aatattttgg CD 1251 gttgactccc aataaatatg taactcctCg cttcgtctca acctttccag CD 1301 ttattttaga tacgctattt aagtattgga tctttcgtca cttaaatcga CD 1351 acatctcctt caattgtagc aacttatcat acaatgagtg aatga FT EDITED CDNA CD 1 atggcggcgg gtaattcttc atgggcccga gcagctttta cttttaaagc CD 51 tacggttttc aaaaaatcta gatatgtcat atattacagt cttctggaac CD 101 acagatttag tctatctctt tggggaatac ttaaatattc agggatttat CD 151 ttttgtacgg agatccttcg gtcatttccg aaaaagcgct gcaaatccca CD 201 tccctatcgt gtagacggct atccggcagg aagttgttta gatccgcctc CD 251 tgcatgaacc tctagatact tcaactccca agaagatatc tttagtgtct CD 301 tgttctaatt cttacatgcg taacaaaaca gataatggaa aggtaggatc CD 351 taggaatgta tcggaataca aactcgaagg cgattttgcc tctacaagta CD 401 aatccattta ttacaagtta aataatctgg agaaaatgaa tagaaaatta CD 451 gcttggatcg aagccgtttc gagtgagttt tctttttggg aaaaacttcg CD 501 ttccaaacaa atctttccat ttcaaaatga aaaagatttg attgcagaac CD 551 cgtttaacta cgaattagca gtttctcacc gccgtccagt aatttacgag CD 601 tcaattagtt tggtgcctcg gtctgtaact cgtaccttat ccagattcaa CD 651 ggcggagtta acaaatcaat caaatttaaa tttatcagtc cataataaat CD 701 ttgatttagc taagaaccaa gcctctgttt ccctccaata tgttggattc CD 751 cttctctttc ttttcccgat tcaaattgct atagaaaatt ggtttttgga CD 801 accccggatt aggggttggt ggaacatacg tcaaatccaa ttattttcaa CD 851 acgtgtttca ggaagaaaac gctttgaagc agctccgaga agcagaggca CD 901 ttattcTggt tagacgatgt gattggcaac ttggcagata cgcagttgca CD 951 aaattttgat acggatgcgc gcaacgaaac tactcgatta gcaatgaTgt CD 1001 atgacgagct aaatattcag ctactactgc ggctagcaac caacgcaatt CD 1051 agcattgcca ctttatttcc cctactgata ttcgggcgaa agagactcgc CD 1101 ggttttaaat tccTggattc aagagtTatt ttatagttta aatgacacaa CD 1151 tgaaggcgtt ttccatcctt ctattaactg atttatgtgt agggtttcac CD 1201 tcgccccatg gttgggaaat actagtacag tcccttttcg aatattttgg CD 1251 gttgactccc aataaatatg taactcctTg cttcgtctca acctttccag CD 1301 ttattttaga tacgctattt aagtattgga tctttcgtca cttaaatcga CD 1351 acatctcctt caattgtagc aacttatcat acaatgagtg aatga SQ SEQUENCE 465 AA; MAAGNSSWAR AAFTFKATVF KKSRYVIYYS LLEHRFSLSL WGILKYSGIY FCTEILRSFP KKRCKSHPYR VDGYPAGSCL DPPLHEPLDT STPKKISLVS CSNSYMRNKT DNGKVGSRNV SEYKLEGDFA STSKSIYYKL NNLEKMNRKL AWIEAVSSEF SFWEKLRSKQ IFPFQNEKDL IAEPFNYELA VSHRRPVIYE SISLVPRSVT RTLSRFKAEL TNQSNLNLSV HNKFDLAKNQ ASVSLQYVGF LLFLFPIQIA IENWFLEPRI RGWWNIRQIQ LFSNVFQEEN ALKQLREAEA LFWLDDVIGN LADTQLQNFD TDARNETTRL AMMYDELNIQ LLLRLATNAI SIATLFPLLI FGRKRLAVLN SWIQELFYSL NDTMKAFSIL LLTDLCVGFH SPHGWEILVQ SLFEYFGLTP NKYVTPCFVS TFPVILDTLF KYWIFRHLNR TSPSIVATYH TMSE* // ID AY178864_37 STANDARD; PRT; 322 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : petA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29404.2 FT PROTEIN_NAME : cytochrome f FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 58032 - 58997 FT DIRECTIONS : positive FT EDITING : 91 W(Tgg) -> R(Cgg) FT EDITING : 94 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 966 NT; CD 1 atgcaaacag cgattaccaa aaagtggatg aaggaatggt ggattttatc CD 51 actggcggca ttaatcagtt ttggcaaatt aagctgtcca tctgtatcaa CD 101 atgcatatcc aatttttgcg caacagaact acgaaaatcc acgcgaagcc CD 151 acaggtcgta ttgtgtgtgc caattgtcat ttagccaaaa aaactgttga CD 201 tcttgaggct ccgcaatctg ttcttcccga tactgtattc gaagcaattg CD 251 ttaagattcc ttacgacacg TggataaaaT aagtactagc aaatggtaaa CD 301 aagggggggc tgaatgtcgg cgccgttctc atcttacccg aaggatttga CD 351 attagctccc cctaatcgta ttccaaccga attaaaaaat aaattaggaa CD 401 aattatcgtt tcaaacttac cgacccggtg aaaaaaatat aattgtcgta CD 451 ggtccagtac cgggcaagtt atacagcgag attatattcc cagttttatc CD 501 accagacccc ggtaccaata aagaagcaca ttttttaaaa taccctattt CD 551 acgtaggggg aaacaggggg aggggacaaa tctatccgga tgggagcaag CD 601 agtaacaaca cggtttatac cgcttcagcg acgggaaaaa taaagaggat CD 651 tactcggaaa gagggaaaag gtgggtacga aattatcatt gaggagtcat CD 701 ccgggggtcg tgaagcaatt gatgttgtac ctcccggccc cgaacttatt CD 751 gtttcggaag gtgagtttgt taaagcggat caaccgttaa ctaataaccc CD 801 caatgtcggg ggattcggtc agggagaagt agaaatcgta ctacaagatc CD 851 cccgtcggat ccaaggtctc ttagctttct ttgcatcggt tgttttagca CD 901 cagatttttc ttgtgcttaa gaagaaacag tttgaaaaag tccagttggc CD 951 tgaaatgaat ttctga FT EDITED CDNA CD 1 atgcaaacag cgattaccaa aaagtggatg aaggaatggt ggattttatc CD 51 actggcggca ttaatcagtt ttggcaaatt aagctgtcca tctgtatcaa CD 101 atgcatatcc aatttttgcg caacagaact acgaaaatcc acgcgaagcc CD 151 acaggtcgta ttgtgtgtgc caattgtcat ttagccaaaa aaactgttga CD 201 tcttgaggct ccgcaatctg ttcttcccga tactgtattc gaagcaattg CD 251 ttaagattcc ttacgacacg CggataaaaC aagtactagc aaatggtaaa CD 301 aagggggggc tgaatgtcgg cgccgttctc atcttacccg aaggatttga CD 351 attagctccc cctaatcgta ttccaaccga attaaaaaat aaattaggaa CD 401 aattatcgtt tcaaacttac cgacccggtg aaaaaaatat aattgtcgta CD 451 ggtccagtac cgggcaagtt atacagcgag attatattcc cagttttatc CD 501 accagacccc ggtaccaata aagaagcaca ttttttaaaa taccctattt CD 551 acgtaggggg aaacaggggg aggggacaaa tctatccgga tgggagcaag CD 601 agtaacaaca cggtttatac cgcttcagcg acgggaaaaa taaagaggat CD 651 tactcggaaa gagggaaaag gtgggtacga aattatcatt gaggagtcat CD 701 ccgggggtcg tgaagcaatt gatgttgtac ctcccggccc cgaacttatt CD 751 gtttcggaag gtgagtttgt taaagcggat caaccgttaa ctaataaccc CD 801 caatgtcggg ggattcggtc agggagaagt agaaatcgta ctacaagatc CD 851 cccgtcggat ccaaggtctc ttagctttct ttgcatcggt tgttttagca CD 901 cagatttttc ttgtgcttaa gaagaaacag tttgaaaaag tccagttggc CD 951 tgaaatgaat ttctga SQ SEQUENCE 322 AA; MQTAITKKWM KEWWILSLAA LISFGKLSCP SVSNAYPIFA QQNYENPREA TGRIVCANCH LAKKTVDLEA PQSVLPDTVF EAIVKIPYDT RIKQVLANGK KGGLNVGAVL ILPEGFELAP PNRIPTELKN KLGKLSFQTY RPGEKNIIVV GPVPGKLYSE IIFPVLSPDP GTNKEAHFLK YPIYVGGNRG RGQIYPDGSK SNNTVYTASA TGKIKRITRK EGKGGYEIII EESSGGREAI DVVPPGPELI VSEGEFVKAD QPLTNNPNVG GFGQGEVEIV LQDPRRIQGL LAFFASVVLA QIFLVLKKKQ FEKVQLAEMN F* // ID AY178864_38 STANDARD; PRT; 41 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbJ FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29405.2 FT PROTEIN_NAME : photosystem II protein J FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 59741 - 59863 FT DIRECTIONS : negative FT EDITING : 11 R(Cgg) -> W(Tgg) FT EDITING : 25 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 123 NT; CD 1 atgacaaata ccactggaag ggttcccttg Cggttggtag gtactgtagc CD 51 cggtacactt gtgataggtt tgcCgggtgt atttttttac ggagcttatt CD 101 cggggttagg atcatctctc tag FT EDITED CDNA CD 1 atgacaaata ccactggaag ggttcccttg Tggttggtag gtactgtagc CD 51 cggtacactt gtgataggtt tgcTgggtgt atttttttac ggagcttatt CD 101 cggggttagg atcatctctc tag SQ SEQUENCE 41 AA; MTNTTGRVPL WLVGTVAGTL VIGLLGVFFY GAYSGLGSSL * // ID AY178864_39 STANDARD; PRT; 39 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29406.2 FT PROTEIN_NAME : photosystem II protein L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 59984 - 60100 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 13 P(cCg) -> L(cTg) FT EDITING : 20 R(Cgg) -> W(Tgg) FT EDITING : 31 P(cCt) -> L(cTt) FT EDITING : 32 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaac caaatccaaa taagcagagc gtggagcCga atcgtacaag CD 51 cctttatCgg ggactattgc tgattttcgt acttgccgtt cCttCttcca CD 101 actatttctt taattag FT EDITED CDNA CD 1 aTgacacaac caaatccaaa taagcagagc gtggagcTga atcgtacaag CD 51 cctttatTgg ggactattgc tgattttcgt acttgccgtt cTttTttcca CD 101 actatttctt taattag SQ SEQUENCE 39 AA; MTQPNPNKQS VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AY178864_40 STANDARD; PRT; 40 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbF FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29407.2 FT PROTEIN_NAME : cytochrome b559 beta chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 60122 - 60241 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 27 S(tCC) -> F(tTT) FT EDITING : 28 P(CCa) -> L(TTa) FT EDITING : 34 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 120 NT; CD 1 aCggctttag ataaaactta tccaattttc actgttagat ggttggctgt CD 51 ccatggatta gctgtaccta cggttttctC CCCagggtct atatcagcta CD 101 Cgcaattcat tcagagatag FT EDITED CDNA CD 1 aTggctttag ataaaactta tccaattttc actgttagat ggttggctgt CD 51 ccatggatta gctgtaccta cggttttctT TTTagggtct atatcagcta CD 101 Tgcaattcat tcagagatag SQ SEQUENCE 40 AA; MALDKTYPIF TVRWLAVHGL AVPTVFFLGS ISAMQFIQR* // ID AY178864_41 STANDARD; PRT; 84 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbE FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29408.2 FT PROTEIN_NAME : cytochrome b559 alpha chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 60251 - 60502 FT DIRECTIONS : negative FT EDITING : 10 F(ttC) -> F(ttT) FT EDITING : 30 P(cCg) -> L(cTg) FT EDITING : 37 S(tCt) -> F(tTt) FT EDITING : 47 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 252 NT; CD 1 atgtctggga atacaggaga gcgccccttC gccgacatca tcactagtat CD 51 tcgatactgg gtcattcaca gcattactat accctcccCg tttatcgcag CD 101 gctggctgtC tgtaagtaca ggtttagctt acgacgtttC tggaagcccc CD 151 cggccaaacg aatatttttc ggagagccga caagaagttc ctctaataac CD 201 tggtcgcttc gactcgctag aacaagttga tgcattcaca aaatcctttt CD 251 ag FT EDITED CDNA CD 1 atgtctggga atacaggaga gcgccccttT gccgacatca tcactagtat CD 51 tcgatactgg gtcattcaca gcattactat accctcccTg tttatcgcag CD 101 gctggctgtT tgtaagtaca ggtttagctt acgacgtttT tggaagcccc CD 151 cggccaaacg aatatttttc ggagagccga caagaagttc ctctaataac CD 201 tggtcgcttc gactcgctag aacaagttga tgcattcaca aaatcctttt CD 251 ag SQ SEQUENCE 84 AA; MSGNTGERPF ADIITSIRYW VIHSITIPSL FIAGWLFVST GLAYDVFGSP RPNEYFSESR QEVPLITGRF DSLEQVDAFT KSF* // ID AY178864_42 STANDARD; PRT; 32 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : petL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29409.2 FT PROTEIN_NAME : cytochrome b6/f complex 3.5 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 61243 - 61338 FT DIRECTIONS : positive FT EDITING : 4 S(tCa) -> L(tTa) FT EDITING : 32 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 96 NT; CD 1 atgttcactt Cactaagcta ctttgctttt ctgatgctcg cattaacttt CD 51 taccctagct ctatttgttg gattgaacaa aattcagatt ctgCaa FT EDITED CDNA CD 1 atgttcactt Tactaagcta ctttgctttt ctgatgctcg cattaacttt CD 51 taccctagct ctatttgttg gattgaacaa aattcagatt ctgTaa SQ SEQUENCE 32 AA; MFTLLSYFAF LMLALTFTLA LFVGLNKIQI L* // ID AY178864_43 STANDARD; PRT; 39 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : petG FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29410.2 FT PROTEIN_NAME : cytochrome b6/f complex subunit V FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 61506 - 61622 FT DIRECTIONS : positive FT EDITING : 13 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 atggttgaag cattactctc tggaattgtg ttaggttCga ttccaataac CD 51 cctagctgga ttatttgtaa ctgcatacct tcaataccga cggggcgatc CD 101 aattagatat tcgatga FT EDITED CDNA CD 1 atggttgaag cattactctc tggaattgtg ttaggttTga ttccaataac CD 51 cctagctgga ttatttgtaa ctgcatacct tcaataccga cggggcgatc CD 101 aattagatat tcgatga SQ SEQUENCE 39 AA; MVEALLSGIV LGLIPITLAG LFVTAYLQYR RGDQLDIR* // ID AY178864_44 STANDARD; PRT; 43 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psaJ FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29411.2 FT PROTEIN_NAME : photosystem I subunit IX FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 62530 - 62658 FT DIRECTIONS : positive FT EDITING : 29 T(aCa) -> I(aTa) FT CODON_START : 1 CL CDNALEN 129 NT; CD 1 atgcaacatg taaaaatata tctttccaca gcccctgttg tagctacaat CD 51 atggtttggc ttactggctg gtttattaat agaaaCaaat cgattctttc CD 101 cggatgcttt attatttcca tttccctaa FT EDITED CDNA CD 1 atgcaacatg taaaaatata tctttccaca gcccctgttg tagctacaat CD 51 atggtttggc ttactggctg gtttattaat agaaaTaaat cgattctttc CD 101 cggatgcttt attatttcca tttccctaa SQ SEQUENCE 43 AA; MQHVKIYLST APVVATIWFG LLAGLLIEIN RFFPDALLFP FP* // ID AY178864_45 STANDARD; PRT; 67 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl33 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29412.2 FT PROTEIN_NAME : ribosomal protein L33 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 62889 - 63089 FT DIRECTIONS : positive FT EDITING : 48 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 201 NT; CD 1 atggccaata ctaaagatgc aagggtaact attgctttgg aatgtacaag CD 51 ttgtattcag agaaaaacca gtggaaaatc cgcgggtctt tgccgataca CD 101 ctacacgtaa aaatcgtcgt aacacacccg ctcggctgga gtCagagaag CD 151 tattgcttcc attgtcacaa gcataccttg cacaaagagt cgaagaagta CD 201 a FT EDITED CDNA CD 1 atggccaata ctaaagatgc aagggtaact attgctttgg aatgtacaag CD 51 ttgtattcag agaaaaacca gtggaaaatc cgcgggtctt tgccgataca CD 101 ctacacgtaa aaatcgtcgt aacacacccg ctcggctgga gtTagagaag CD 151 tattgcttcc attgtcacaa gcataccttg cacaaagagt cgaagaagta CD 201 a SQ SEQUENCE 67 AA; MANTKDARVT IALECTSCIQ RKTSGKSAGL CRYTTRKNRR NTPARLELEK YCFHCHKHTL HKESKK* // ID AY178864_47 STANDARD; PRT; 119 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl20 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29414.2 FT PROTEIN_NAME : ribosomal protein L20 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 63660 - 64016 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 76 H(Cac) -> Y(Tac) FT EDITING : 101 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 aCgactagag taaaacgagg atctgtggct cggaagtatc gcaaaaacat CD 51 tctcgatttt gtgtccggtt ttcggggggc tcattcaaaa ttgtttagaa CD 101 cggcaaacca gcgaaggggt aggtctttag cttatgctta tgtagataaa CD 151 aataatagca aaagagcctt tcgccgtctc tggattgctc ggattaatgc CD 201 agcagcgcgg agagatggaa ttaccCacag ttcggtaatt catagtttgt CD 251 acaaaaatcg gattgccttg aatcgcaaga cacttgctca aatcgctact CD 301 cCagatgcct actgtttttc tatgatcata gaaaaagtta gcaaaataaa CD 351 aatttga FT EDITED CDNA CD 1 aTgactagag taaaacgagg atctgtggct cggaagtatc gcaaaaacat CD 51 tctcgatttt gtgtccggtt ttcggggggc tcattcaaaa ttgtttagaa CD 101 cggcaaacca gcgaaggggt aggtctttag cttatgctta tgtagataaa CD 151 aataatagca aaagagcctt tcgccgtctc tggattgctc ggattaatgc CD 201 agcagcgcgg agagatggaa ttaccTacag ttcggtaatt catagtttgt CD 251 acaaaaatcg gattgccttg aatcgcaaga cacttgctca aatcgctact CD 301 cTagatgcct actgtttttc tatgatcata gaaaaagtta gcaaaataaa CD 351 aatttga SQ SEQUENCE 119 AA; MTRVKRGSVA RKYRKNILDF VSGFRGAHSK LFRTANQRRG RSLAYAYVDK NNSKRAFRRL WIARINAAAR RDGITYSSVI HSLYKNRIAL NRKTLAQIAT LDAYCFSMII EKVSKIKI* // ID AY178864_48 STANDARD; PRT; 201 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : clpP FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29415.2 FT PROTEIN_NAME : ATP-dependent Clp protease proteolytic subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 24/2 FT INTRON 122/0 FT EDITING : 65 S(tCg) -> L(tTg) FT EDITING : 105 S(tCt) -> F(tTt) FT EDITING : 107 S(tCg) -> L(tTg) FT EDITING : 147 A(gCg) -> V(gTg) FT EDITING : 148 S(tCg) -> L(tTg) FT EDITING : 190 A(gCg) -> V(gTg) FT CODON_START : 1 CL CDNALEN 603 NT; CD 1 atgccaattg gtgttccaaa agtgcccttt cgtctacccg gggaagagga CD 51 tgcagtttgg gttgacgtat acaaccggct ttatcgagaa aggcttcttt CD 101 tcctaggtca acaagtcgat gacgaaattg ccaatcaact tattggtatc CD 151 atgatgtatc taaatagcga agatcaggcc aaagatatgt attCgtatgt CD 201 aaattccccc ggcggggcag tattagccgg aatatctgtt tacgacgcga CD 251 tgcaatttgt tgtaccagat gtacatacta tttgcatggg actcgccgct CD 301 tcaatgggat cttCtatttC ggctggagga gagattacca gacgtatagc CD 351 actgccccac gctagggtga tgattcatca acccgctagt tcatattatg CD 401 acggacaggc tggagaatgt gtcatggaag cggaggaagC gtCgaaacta CD 451 cgtgattgta taaccaaagt ttatgcccaa agaactggca aacctttgtg CD 501 gttaatttcc gaggacatgg aaagagatgt atttttgtca gcggaagaag CD 551 cccaggatta cggtgttgCg gatctagtag cggtggaaaa tgtttcacgc CD 601 tga FT EDITED CDNA CD 1 atgccaattg gtgttccaaa agtgcccttt cgtctacccg gggaagagga CD 51 tgcagtttgg gttgacgtat acaaccggct ttatcgagaa aggcttcttt CD 101 tcctaggtca acaagtcgat gacgaaattg ccaatcaact tattggtatc CD 151 atgatgtatc taaatagcga agatcaggcc aaagatatgt attTgtatgt CD 201 aaattccccc ggcggggcag tattagccgg aatatctgtt tacgacgcga CD 251 tgcaatttgt tgtaccagat gtacatacta tttgcatggg actcgccgct CD 301 tcaatgggat cttTtatttT ggctggagga gagattacca gacgtatagc CD 351 actgccccac gctagggtga tgattcatca acccgctagt tcatattatg CD 401 acggacaggc tggagaatgt gtcatggaag cggaggaagT gtTgaaacta CD 451 cgtgattgta taaccaaagt ttatgcccaa agaactggca aacctttgtg CD 501 gttaatttcc gaggacatgg aaagagatgt atttttgtca gcggaagaag CD 551 cccaggatta cggtgttgTg gatctagtag cggtggaaaa tgtttcacgc CD 601 tga SQ SEQUENCE 201 AA; MPIGVPKVPF RLPGEEDAVW VDVYNRLYRE RLLFLGQQVD DEIANQLIGI MMYLNSEDQA KDMYLYVNSP GGAVLAGISV YDAMQFVVPD VHTICMGLAA SMGSFILAGG EITRRIALPH ARVMIHQPAS SYYDGQAGEC VMEAEEVLKL RDCITKVYAQ RTGKPLWLIS EDMERDVFLS AEEAQDYGVV DLVAVENVSR * // ID AY178864_49 STANDARD; PRT; 509 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29416.2 FT PROTEIN_NAME : photosystem II 47 kDa protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 67792 - 69318 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 39 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1527 NT; CD 1 aCgggtttgc cttggtatcg cgttcacacc gtcgtattaa acgaccccgg CD 51 tcgtctaatt tccgtacatc tgatgcatac agctttggtc tccggctggg CD 101 cgggctcgat ggcttCatat gaattagcgg tttttgatcc atctgacccc CD 151 gttctcgatc caatgtggag gcagggtatg tttgtcattc cctttatgac CD 201 tcgcattggg gtatcaaaat cttggggggg ttggattatc acaggagata CD 251 cctcaacaga cgcgggtatc tggagttacg aaggcgtagc cgcagctcat CD 301 atcatactat ctggcttgct gtttctagct gctatatggc actgggtata CD 351 ttgggacctg gatctatttc gtgacgatcg tacgggaaaa ccatccctgg CD 401 atttacctaa gatatttgga attcacctat ttctttcagg agtactttgt CD 451 ttttcatttg gggcgtttca cgtaactggt ttatttggtc ccggcatttg CD 501 gatctcagat ccatacggat taactggaaa agtggaaccc gtagacccgg CD 551 cttggggggc tgagggcttc gatccattca ttccaggcgg aatagcgtcg CD 601 catcatatag cagcaggagt gttaggtata ctcgccggat tgttccatct CD 651 aagtgtccgc cctccccaga ggttgtacaa agctttacgc atgggaaacg CD 701 ttgaaaccgt attatctagc agtattgccg ccgtcttttt tgccgccttc CD 751 gtagtttctg gaaccatgtg gtacggatcc gccgccactc cgattgaatt CD 801 gtttggccct acccgctacc aatgggatca aggatatttt caacaagaga CD 851 tagaaagacg aatacgatta ggcgaagctg aaaatctcag cttatcccaa CD 901 gtttggtcaa agattccgga aaaattggct ttttatgatt acattggcaa CD 951 caatcctgcg aagggtggat tgtttagggc gggtgcaatg gacaacggag CD 1001 atggcatagc tgtcggttgg ttaggtcatg cccttttcaa ggatagggaa CD 1051 ggacgtgagc tgtttgtacg ccgtatgcca accttctttg aaacatttcc CD 1101 ggtcgtcttg gtagatggag aaggtgtcgt aagagctgat gtaccattca CD 1151 gacgagcgga atcaaaatac agtgttgagc aagtgggtgt aaccgtagac CD 1201 tttttcggtg gcgaattaga tggcgccagc tttagtgacc ctgccacagt CD 1251 aaagaaatat gctaggcgtg ctcaattggg cgaaatcttt gaatttgatc CD 1301 gtgcgacttt aaaatcggat ggtgtattca gaagtagtcc acggggttgg CD 1351 ttcactttcg gtcacaccac atttgctctc atttttttct ttggccacat CD 1401 ttggcatggc gcaagaactt tgtttagaga cgtttttgcc ggcatcgacc CD 1451 ccgatttgga cgcccaagtt gaatttggtg catttcagaa gttaggagac CD 1501 ccaagtacca aaaaacaagc cgtttag FT EDITED CDNA CD 1 aTgggtttgc cttggtatcg cgttcacacc gtcgtattaa acgaccccgg CD 51 tcgtctaatt tccgtacatc tgatgcatac agctttggtc tccggctggg CD 101 cgggctcgat ggcttTatat gaattagcgg tttttgatcc atctgacccc CD 151 gttctcgatc caatgtggag gcagggtatg tttgtcattc cctttatgac CD 201 tcgcattggg gtatcaaaat cttggggggg ttggattatc acaggagata CD 251 cctcaacaga cgcgggtatc tggagttacg aaggcgtagc cgcagctcat CD 301 atcatactat ctggcttgct gtttctagct gctatatggc actgggtata CD 351 ttgggacctg gatctatttc gtgacgatcg tacgggaaaa ccatccctgg CD 401 atttacctaa gatatttgga attcacctat ttctttcagg agtactttgt CD 451 ttttcatttg gggcgtttca cgtaactggt ttatttggtc ccggcatttg CD 501 gatctcagat ccatacggat taactggaaa agtggaaccc gtagacccgg CD 551 cttggggggc tgagggcttc gatccattca ttccaggcgg aatagcgtcg CD 601 catcatatag cagcaggagt gttaggtata ctcgccggat tgttccatct CD 651 aagtgtccgc cctccccaga ggttgtacaa agctttacgc atgggaaacg CD 701 ttgaaaccgt attatctagc agtattgccg ccgtcttttt tgccgccttc CD 751 gtagtttctg gaaccatgtg gtacggatcc gccgccactc cgattgaatt CD 801 gtttggccct acccgctacc aatgggatca aggatatttt caacaagaga CD 851 tagaaagacg aatacgatta ggcgaagctg aaaatctcag cttatcccaa CD 901 gtttggtcaa agattccgga aaaattggct ttttatgatt acattggcaa CD 951 caatcctgcg aagggtggat tgtttagggc gggtgcaatg gacaacggag CD 1001 atggcatagc tgtcggttgg ttaggtcatg cccttttcaa ggatagggaa CD 1051 ggacgtgagc tgtttgtacg ccgtatgcca accttctttg aaacatttcc CD 1101 ggtcgtcttg gtagatggag aaggtgtcgt aagagctgat gtaccattca CD 1151 gacgagcgga atcaaaatac agtgttgagc aagtgggtgt aaccgtagac CD 1201 tttttcggtg gcgaattaga tggcgccagc tttagtgacc ctgccacagt CD 1251 aaagaaatat gctaggcgtg ctcaattggg cgaaatcttt gaatttgatc CD 1301 gtgcgacttt aaaatcggat ggtgtattca gaagtagtcc acggggttgg CD 1351 ttcactttcg gtcacaccac atttgctctc atttttttct ttggccacat CD 1401 ttggcatggc gcaagaactt tgtttagaga cgtttttgcc ggcatcgacc CD 1451 ccgatttgga cgcccaagtt gaatttggtg catttcagaa gttaggagac CD 1501 ccaagtacca aaaaacaagc cgtttag SQ SEQUENCE 509 AA; MGLPWYRVHT VVLNDPGRLI SVHLMHTALV SGWAGSMALY ELAVFDPSDP VLDPMWRQGM FVIPFMTRIG VSKSWGGWII TGDTSTDAGI WSYEGVAAAH IILSGLLFLA AIWHWVYWDL DLFRDDRTGK PSLDLPKIFG IHLFLSGVLC FSFGAFHVTG LFGPGIWISD PYGLTGKVEP VDPAWGAEGF DPFIPGGIAS HHIAAGVLGI LAGLFHLSVR PPQRLYKALR MGNVETVLSS SIAAVFFAAF VVSGTMWYGS AATPIELFGP TRYQWDQGYF QQEIERRIRL GEAENLSLSQ VWSKIPEKLA FYDYIGNNPA KGGLFRAGAM DNGDGIAVGW LGHALFKDRE GRELFVRRMP TFFETFPVVL VDGEGVVRAD VPFRRAESKY SVEQVGVTVD FFGGELDGAS FSDPATVKKY ARRAQLGEIF EFDRATLKSD GVFRSSPRGW FTFGHTTFAL IFFFGHIWHG ARTLFRDVFA GIDPDLDAQV EFGAFQKLGD PSTKKQAV* // ID AY178864_50 STANDARD; PRT; 35 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbT FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29417.2 FT PROTEIN_NAME : photosystem II protein T FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 69569 - 69673 FT DIRECTIONS : positive FT EDITING : 14 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 105 NT; CD 1 atggaagcac tggtttacac atttttgctg gtagccactt Caggtataat CD 51 ttttttcgca attttttttc gagaacctcc taaggtgcct aacagaggta CD 101 aataa FT EDITED CDNA CD 1 atggaagcac tggtttacac atttttgctg gtagccactt Taggtataat CD 51 ttttttcgca attttttttc gagaacctcc taaggtgcct aacagaggta CD 101 aataa SQ SEQUENCE 35 AA; MEALVYTFLL VATLGIIFFA IFFREPPKVP NRGK* // ID AY178864_53 STANDARD; PRT; 216 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : petB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29420.2 FT PROTEIN_NAME : cytochrome b6 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 3/0 FT EDITING : 42 T(acC) -> T(acT) FT EDITING : 72 T(aCa) -> I(aTa) FT EDITING : 95 P(cCt) -> L(cTt) FT EDITING : 168 S(tCg) -> L(tTg) FT EDITING : 200 P(cCg) -> L(cTg) FT EDITING : 205 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 648 NT; CD 1 atgtctaagg tatatgactg gtttgaagag cgcctcgaaa ttcaggcaat CD 51 tgcggatgat attactagta aatacgtccc tccacatgtg aacatatttt CD 101 actgcttggg aggaatcacg ttaacCtgct ttttagttca aatagctacc CD 151 ggttttgcta tgacctttta ttaccgtcca actgttacgg aagctttttc CD 201 ttctgttcaa tataCaatga ctgaggtaaa ttttggctgg cttattcgtt CD 251 ctgttcaccg ttggtcagca agtatgatgg tacCtgtgat gattctgcat CD 301 gtatttcgtg tttatctaac tgggggattc aaaaaacctc gtgaattgac CD 351 ttgggttact ggagtgattt tagctgtatt aaccgtttct ttcggcgtaa CD 401 ctggatattc cttaccctgg gatcagattg gttactgggc cgttaaaatc CD 451 gtgacaggtg tacccgaagc cattcccttt ataggatctt cattagtaga CD 501 atCgttacgg ggaagtgtga gtgttggaca atccacatta actcgtttct CD 551 acagtttaca cacctttgtc ttgccgcttc ttactgccgt ttttatgcCg CD 601 atgcattttc taaCgattcg taaacaaggc atttcgggtc ccttgtaa FT EDITED CDNA CD 1 atgtctaagg tatatgactg gtttgaagag cgcctcgaaa ttcaggcaat CD 51 tgcggatgat attactagta aatacgtccc tccacatgtg aacatatttt CD 101 actgcttggg aggaatcacg ttaacTtgct ttttagttca aatagctacc CD 151 ggttttgcta tgacctttta ttaccgtcca actgttacgg aagctttttc CD 201 ttctgttcaa tataTaatga ctgaggtaaa ttttggctgg cttattcgtt CD 251 ctgttcaccg ttggtcagca agtatgatgg tacTtgtgat gattctgcat CD 301 gtatttcgtg tttatctaac tgggggattc aaaaaacctc gtgaattgac CD 351 ttgggttact ggagtgattt tagctgtatt aaccgtttct ttcggcgtaa CD 401 ctggatattc cttaccctgg gatcagattg gttactgggc cgttaaaatc CD 451 gtgacaggtg tacccgaagc cattcccttt ataggatctt cattagtaga CD 501 atTgttacgg ggaagtgtga gtgttggaca atccacatta actcgtttct CD 551 acagtttaca cacctttgtc ttgccgcttc ttactgccgt ttttatgcTg CD 601 atgcattttc taaTgattcg taaacaaggc atttcgggtc ccttgtaa SQ SEQUENCE 216 AA; MSKVYDWFEE RLEIQAIADD ITSKYVPPHV NIFYCLGGIT LTCFLVQIAT GFAMTFYYRP TVTEAFSSVQ YIMTEVNFGW LIRSVHRWSA SMMVLVMILH VFRVYLTGGF KKPRELTWVT GVILAVLTVS FGVTGYSLPW DQIGYWAVKI VTGVPEAIPF IGSSLVELLR GSVSVGQSTL TRFYSLHTFV LPLLTAVFML MHFLMIRKQG ISGPL* // ID AY178864_54 STANDARD; PRT; 160 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : petD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29421.2 FT PROTEIN_NAME : cytochrome b6/f complex subunit IV FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 3/2 FT EDITING : 36 S(tCa) -> L(tTa) FT EDITING : 99 P(cCg) -> L(cTg) FT EDITING : 142 S(tCa) -> L(tTa) FT EDITING : 160 Q(Cag) -> *(Tag) FT CODON_START : 1 CL CDNALEN 480 NT; CD 1 atgggagtaa aaaaacctga cttgaacgat cctgttttgc gggcaaaatt CD 51 agctaaaggc atgggacata attactatgg agaacctgct tggccaaatg CD 101 atctttCata tatatttcct gtagtaatct tagggactgt tgcgtgtact CD 151 gtggggctgg ctgttttgga accatcaatg gttggtgaac cggcaaatcc CD 201 atttgcaact cctttggaaa tattacctga gtggtatttt tttcccgtat CD 251 ttcaaatact tcgtaccgta ccaaataaat tactaggtgt tctccCgatg CD 301 gcgtcggtgc ctgcaggttt attgaccgtt ccttttcttg aaaatgttaa CD 351 taaattccaa aatccgtttc gacgcccagt agccacaaca gtctttgcaa CD 401 ttggcaccgt ggccgccatc tggtCaggca tcggagcaac tttacccata CD 451 gagggatctc taactttggg tctatttCag FT EDITED CDNA CD 1 atgggagtaa aaaaacctga cttgaacgat cctgttttgc gggcaaaatt CD 51 agctaaaggc atgggacata attactatgg agaacctgct tggccaaatg CD 101 atctttTata tatatttcct gtagtaatct tagggactgt tgcgtgtact CD 151 gtggggctgg ctgttttgga accatcaatg gttggtgaac cggcaaatcc CD 201 atttgcaact cctttggaaa tattacctga gtggtatttt tttcccgtat CD 251 ttcaaatact tcgtaccgta ccaaataaat tactaggtgt tctccTgatg CD 301 gcgtcggtgc ctgcaggttt attgaccgtt ccttttcttg aaaatgttaa CD 351 taaattccaa aatccgtttc gacgcccagt agccacaaca gtctttgcaa CD 401 ttggcaccgt ggccgccatc tggtTaggca tcggagcaac tttacccata CD 451 gagggatctc taactttggg tctatttTag SQ SEQUENCE 160 AA; MGVKKPDLND PVLRAKLAKG MGHNYYGEPA WPNDLLYIFP VVILGTVACT VGLAVLEPSM VGEPANPFAT PLEILPEWYF FPVFQILRTV PNKLLGVLLM ASVPAGLLTV PFLENVNKFQ NPFRRPVATT VFAIGTVAAI WLGIGATLPI EGSLTLGLF* // ID AY178864_55 STANDARD; PRT; 346 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpoA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29422.2 FT PROTEIN_NAME : RNA polymerase alpha chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 73494 - 74531 FT DIRECTIONS : negative FT EDITING : 54 S(tCa) -> L(tTa) FT EDITING : 87 A(gCt) -> V(gTt) FT EDITING : 91 P(cCg) -> L(cTg) FT EDITING : 109 S(tCa) -> L(tTa) FT EDITING : 122 P(cCa) -> L(cTa) FT EDITING : 200 S(tCa) -> L(tTa) FT EDITING : 210 P(cCg) -> L(cTg) FT EDITING : 227 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1038 NT; CD 1 atgcgcaaaa atgagatgtc gacctctaag caggcaattc agtggaaatg CD 51 ccttgaatcc aaaatagaaa gtaagcggct tcattatggt cgtttccttg CD 101 tatctccctt taaaaggggt caagccagta ctgtaggaat tgccatgcgt CD 151 agagccttgt Cacaagagat tgaaggaaca agcataacat gtgcaagatt CD 201 ttgcggagtc gtgcacgagt attccacaat aacgggtctt caagagacaa CD 251 tacatgatgC tttagttaat cCgaaagaga ttgtgcttag gggcgattca CD 301 aaagaagata ttcaagaggc attttCatct gtaacaggtc ctaaagaagt CD 351 aactgcgggc gatcCatcat taccacctgg cgtcgaagca attgacaatt CD 401 cgcaatatat agctaccatt acccaaccaa tatctctaac tattgaatta CD 451 gaaattgaaa aagattgcgg atatcgtata gaaaatctag cgaaatccgg CD 501 aaagggacaa tttcccatcg atgctgtatt tatgcctgtc cgaaacgtga CD 551 attatagcat ccatctattt ggaagtggta gagcgacgca ggaaatctCa CD 601 ttcattgaaa tatggactaa tggcagtcCg acaccacacg aagcacttag CD 651 gaaagcttct gaaaaactca tggacttgcC aaccaccttc ttgtatgtaa CD 701 ggggcggaga cgtatctctc ttcgaaaatg gcgaagattc tcttgatttg CD 751 acgaaatcac catctttaca acctcaattt ggtgatacga ataatttgga CD 801 agaaagggtt ttagaaaata ggtttattga ccaattggaa ttacctgcca CD 851 gagcttttaa ttgtcttaaa agggccgaaa tatacacaat tgcggatttg CD 901 cttaactata gccgagaaga tctgtcaaaa ttaaagaatt tcggtagaaa CD 951 atctgtggat caagtgtccg aagcgttgtg ggaccgtttt gcaaaagaat CD 1001 tacccgacaa aaaaatagtt ctcaatcggc ggaagtaa FT EDITED CDNA CD 1 atgcgcaaaa atgagatgtc gacctctaag caggcaattc agtggaaatg CD 51 ccttgaatcc aaaatagaaa gtaagcggct tcattatggt cgtttccttg CD 101 tatctccctt taaaaggggt caagccagta ctgtaggaat tgccatgcgt CD 151 agagccttgt Tacaagagat tgaaggaaca agcataacat gtgcaagatt CD 201 ttgcggagtc gtgcacgagt attccacaat aacgggtctt caagagacaa CD 251 tacatgatgT tttagttaat cTgaaagaga ttgtgcttag gggcgattca CD 301 aaagaagata ttcaagaggc attttTatct gtaacaggtc ctaaagaagt CD 351 aactgcgggc gatcTatcat taccacctgg cgtcgaagca attgacaatt CD 401 cgcaatatat agctaccatt acccaaccaa tatctctaac tattgaatta CD 451 gaaattgaaa aagattgcgg atatcgtata gaaaatctag cgaaatccgg CD 501 aaagggacaa tttcccatcg atgctgtatt tatgcctgtc cgaaacgtga CD 551 attatagcat ccatctattt ggaagtggta gagcgacgca ggaaatctTa CD 601 ttcattgaaa tatggactaa tggcagtcTg acaccacacg aagcacttag CD 651 gaaagcttct gaaaaactca tggacttgcT aaccaccttc ttgtatgtaa CD 701 ggggcggaga cgtatctctc ttcgaaaatg gcgaagattc tcttgatttg CD 751 acgaaatcac catctttaca acctcaattt ggtgatacga ataatttgga CD 801 agaaagggtt ttagaaaata ggtttattga ccaattggaa ttacctgcca CD 851 gagcttttaa ttgtcttaaa agggccgaaa tatacacaat tgcggatttg CD 901 cttaactata gccgagaaga tctgtcaaaa ttaaagaatt tcggtagaaa CD 951 atctgtggat caagtgtccg aagcgttgtg ggaccgtttt gcaaaagaat CD 1001 tacccgacaa aaaaatagtt ctcaatcggc ggaagtaa SQ SEQUENCE 346 AA; MRKNEMSTSK QAIQWKCLES KIESKRLHYG RFLVSPFKRG QASTVGIAMR RALLQEIEGT SITCARFCGV VHEYSTITGL QETIHDVLVN LKEIVLRGDS KEDIQEAFLS VTGPKEVTAG DLSLPPGVEA IDNSQYIATI TQPISLTIEL EIEKDCGYRI ENLAKSGKGQ FPIDAVFMPV RNVNYSIHLF GSGRATQEIL FIEIWTNGSL TPHEALRKAS EKLMDLLTTF LYVRGGDVSL FENGEDSLDL TKSPSLQPQF GDTNNLEERV LENRFIDQLE LPARAFNCLK RAEIYTIADL LNYSREDLSK LKNFGRKSVD QVSEALWDRF AKELPDKKIV LNRRK* // ID AY178864_57 STANDARD; PRT; 38 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl36 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29424.2 FT PROTEIN_NAME : ribosomal protein L36 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 75034 - 75147 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 114 NT; CD 1 aCgaaaatcc gtgcttccat tcggaaaata tgtgaaaaat gtcgattgat CD 51 tcgtagacgt agacgaatca tggtaatttg ttgcaactca aaacataaac CD 101 agaaacaagg ataa FT EDITED CDNA CD 1 aTgaaaatcc gtgcttccat tcggaaaata tgtgaaaaat gtcgattgat CD 51 tcgtagacgt agacgaatca tggtaatttg ttgcaactca aaacataaac CD 101 agaaacaagg ataa SQ SEQUENCE 38 AA; MKIRASIRKI CEKCRLIRRR RRIMVICCNS KHKQKQG* // ID AY178864_58 STANDARD; PRT; 81 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : infA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29425.2 FT PROTEIN_NAME : translation initiation factor 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 75281 - 75523 FT DIRECTIONS : negative FT EDITING : 23 *(Tga) -> R(Cga) FT EDITING : 26 S(tCg) -> L(tTg) FT EDITING : 55 A(gCt) -> V(gTt) FT CODON_START : 1 CL CDNALEN 243 NT; CD 1 atgaagaaac agaatctcat tgacatggaa ggtacagtta cagaatcttt CD 51 acccaatgcc acgtttTgag cgtgttCgga taatggatgt caagttttga CD 101 ctcatatatc ggggaggatg cgacgcagtt atataagaat actaccagga CD 151 gatagggtaa gagCtgaact gagtccctat gaccttacca agggacgcat CD 201 catctaccgc cttagaagta ggcatacaaa caatagtcag tag FT EDITED CDNA CD 1 atgaagaaac agaatctcat tgacatggaa ggtacagtta cagaatcttt CD 51 acccaatgcc acgtttCgag cgtgttTgga taatggatgt caagttttga CD 101 ctcatatatc ggggaggatg cgacgcagtt atataagaat actaccagga CD 151 gatagggtaa gagTtgaact gagtccctat gaccttacca agggacgcat CD 201 catctaccgc cttagaagta ggcatacaaa caatagtcag tag SQ SEQUENCE 81 AA; MKKQNLIDME GTVTESLPNA TFRACLDNGC QVLTHISGRM RRSYIRILPG DRVRVELSPY DLTKGRIIYR LRSRHTNNSQ * // ID AY178864_59 STANDARD; PRT; 133 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps8 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29426.2 FT PROTEIN_NAME : ribosomal protein S8 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 75639 - 76037 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 129 R(Cgc) -> C(Tgc) FT CODON_START : 1 CL CDNALEN 399 NT; CD 1 aCgaataatg atgccatctc taccacagtt acttcaatca gaaatgcgaa CD 51 tacgaaaaga aaagctatga ctaggatacc agttactaaa atgactagag CD 101 gtatcgtgca aatcttactg gaagaaggtt ttttaaaaag cgtcacggaa CD 151 cacacagagg gggggaaaat ctttatggat gttaaactga gatattttgg CD 201 caaagaaaaa aagccttacg tggcaactat taggtacatt agcaaacccg CD 251 gtctcagaat ctattgcgat catataagaa tccctaagat cttagggggc CD 301 atgggaattg caattttatc aacgtcttat ggactcatta cagatcggga CD 351 agctaggcga agaaaaactg ggggggaaat tctaCgccat atttggtaa FT EDITED CDNA CD 1 aTgaataatg atgccatctc taccacagtt acttcaatca gaaatgcgaa CD 51 tacgaaaaga aaagctatga ctaggatacc agttactaaa atgactagag CD 101 gtatcgtgca aatcttactg gaagaaggtt ttttaaaaag cgtcacggaa CD 151 cacacagagg gggggaaaat ctttatggat gttaaactga gatattttgg CD 201 caaagaaaaa aagccttacg tggcaactat taggtacatt agcaaacccg CD 251 gtctcagaat ctattgcgat catataagaa tccctaagat cttagggggc CD 301 atgggaattg caattttatc aacgtcttat ggactcatta cagatcggga CD 351 agctaggcga agaaaaactg ggggggaaat tctaTgccat atttggtaa SQ SEQUENCE 133 AA; MNNDAISTTV TSIRNANTKR KAMTRIPVTK MTRGIVQILL EEGFLKSVTE HTEGGKIFMD VKLRYFGKEK KPYVATIRYI SKPGLRIYCD HIRIPKILGG MGIAILSTSY GLITDREARR RKTGGEILCH IW* // ID AY178864_60 STANDARD; PRT; 123 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl14 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29427.2 FT PROTEIN_NAME : ribosomal protein L14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 76367 - 76735 FT DIRECTIONS : negative FT EDITING : 64 C(Tgc) -> R(Cgc) FT CODON_START : 1 CL CDNALEN 369 NT; CD 1 atgattcaaa ttcaaagtta tttagatgta gcagataata gcggagctcg CD 51 caagttgatg tgtattcggg tactaggaac cggtaaccgc aaatacgcag CD 101 atataggtga tattattatc gccgtagtca aggaagccgt acccaacatg CD 151 tttttgaaaa gatcggaagt ggttagggca gtggtagtaT gcactcgtag CD 201 ggggttgaag cgacgcaatg gaatggtcct tgagttcgac gacaacgcag CD 251 ccgtcattat caaccaggaa ggaaatccta gaggaactag gatttttggt CD 301 ccagtagcaa gggaattgag ggaatgtaat tttgccagag tagtctcgtt CD 351 agctcccgaa gtgttgtga FT EDITED CDNA CD 1 atgattcaaa ttcaaagtta tttagatgta gcagataata gcggagctcg CD 51 caagttgatg tgtattcggg tactaggaac cggtaaccgc aaatacgcag CD 101 atataggtga tattattatc gccgtagtca aggaagccgt acccaacatg CD 151 tttttgaaaa gatcggaagt ggttagggca gtggtagtaC gcactcgtag CD 201 ggggttgaag cgacgcaatg gaatggtcct tgagttcgac gacaacgcag CD 251 ccgtcattat caaccaggaa ggaaatccta gaggaactag gatttttggt CD 301 ccagtagcaa gggaattgag ggaatgtaat tttgccagag tagtctcgtt CD 351 agctcccgaa gtgttgtga SQ SEQUENCE 123 AA; MIQIQSYLDV ADNSGARKLM CIRVLGTGNR KYADIGDIII AVVKEAVPNM FLKRSEVVRA VVVRTRRGLK RRNGMVLEFD DNAAVIINQE GNPRGTRIFG PVARELRECN FARVVSLAPE VL* // ID AY178864_62 STANDARD; PRT; 218 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29429.2 FT PROTEIN_NAME : ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 78507 - 79160 FT DIRECTIONS : negative FT EDITING : 16 *(Tag) -> Q(Cag) FT EDITING : 22 R(Cgg) -> W(Tgg) FT EDITING : 42 L(ctC) -> L(ctT) FT EDITING : 55 S(tcC) -> S(tcT) FT EDITING : 211 T(aCc) -> I(aTc) FT CODON_START : 1 CL CDNALEN 654 NT; CD 1 atgggacgaa agattcatcc acttggtttt cgactcggtg taagtTagaa CD 51 gcattattct tatCggttcg cccagaagaa ggattatcca aagtttcttg CD 101 aagaggatag aaagatacgc aatctCgtcg aaaaatatat tcaaaaacat CD 151 gtaaaaagtg tttcCaacta cggcggagtt gggcatattg aaatccagcg CD 201 aaaaacagat cttattcaaa ttaatatata tactggattt cctgatttac CD 251 taattgagga acagagtttg ggaattagtc aaatgaagca ggatctgaga CD 301 aaccttttag ggctcgaaag tcagaatctc cgagtaacat taactggtgt CD 351 tatccaaccc tatggagaac cgaagatttt ggcagaacat gttgcctcac CD 401 aactaaaaaa tagagtacct ttccgacgaa ctatgaaaaa aaccattgaa CD 451 atggctggaa gaaccaacgg tgggggcatc aagatacaaa tagccggacg CD 501 tttgaatggt agtgaaatgg ctcgcgtaga atgggctaga gaaggtagag CD 551 ttcccctaca aacggttgaa gccaacataa gttactgcta tcacccggct CD 601 cagacaattt atggagtttt gggtataaag aCctgggtat ttcgggatac CD 651 ttaa FT EDITED CDNA CD 1 atgggacgaa agattcatcc acttggtttt cgactcggtg taagtCagaa CD 51 gcattattct tatTggttcg cccagaagaa ggattatcca aagtttcttg CD 101 aagaggatag aaagatacgc aatctTgtcg aaaaatatat tcaaaaacat CD 151 gtaaaaagtg tttcTaacta cggcggagtt gggcatattg aaatccagcg CD 201 aaaaacagat cttattcaaa ttaatatata tactggattt cctgatttac CD 251 taattgagga acagagtttg ggaattagtc aaatgaagca ggatctgaga CD 301 aaccttttag ggctcgaaag tcagaatctc cgagtaacat taactggtgt CD 351 tatccaaccc tatggagaac cgaagatttt ggcagaacat gttgcctcac CD 401 aactaaaaaa tagagtacct ttccgacgaa ctatgaaaaa aaccattgaa CD 451 atggctggaa gaaccaacgg tgggggcatc aagatacaaa tagccggacg CD 501 tttgaatggt agtgaaatgg ctcgcgtaga atgggctaga gaaggtagag CD 551 ttcccctaca aacggttgaa gccaacataa gttactgcta tcacccggct CD 601 cagacaattt atggagtttt gggtataaag aTctgggtat ttcgggatac CD 651 ttaa SQ SEQUENCE 218 AA; MGRKIHPLGF RLGVSQKHYS YWFAQKKDYP KFLEEDRKIR NLVEKYIQKH VKSVSNYGGV GHIEIQRKTD LIQINIYTGF PDLLIEEQSL GISQMKQDLR NLLGLESQNL RVTLTGVIQP YGEPKILAEH VASQLKNRVP FRRTMKKTIE MAGRTNGGGI KIQIAGRLNG SEMARVEWAR EGRVPLQTVE ANISYCYHPA QTIYGVLGIK IWVFRDT* // ID AY178864_63 STANDARD; PRT; 123 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl22 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29430.2 FT PROTEIN_NAME : ribosomal protein L22 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 79254 - 79622 FT DIRECTIONS : negative FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 44 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 369 NT; CD 1 atgggaaacg taattaaatc gcaagttgga gcgcaagctc tagggaagaa CD 51 tgtccgtgtg tcagttacca aaatgcaacg tattatcgat cgaatacgaa CD 101 attgctcata tgaagaagca cttgtatCac Ccgaattcat gccctatagg CD 151 gcatgttacc cagtatcaca gctggttctt tccgcagctg caaatgcaag CD 201 taataatctt ggactgaata aatccgattt gtttgtcagt aaagcttggg CD 251 tagataactc caaatacctc cgaagatttc gtccacgagc tcaggggcgc CD 301 ggttacccca taaaaaaacc cacgtgtaaa gtaactattc aattgagctc CD 351 aaagtctatt gagaagtga FT EDITED CDNA CD 1 atgggaaacg taattaaatc gcaagttgga gcgcaagctc tagggaagaa CD 51 tgtccgtgtg tcagttacca aaatgcaacg tattatcgat cgaatacgaa CD 101 attgctcata tgaagaagca cttgtatTac Tcgaattcat gccctatagg CD 151 gcatgttacc cagtatcaca gctggttctt tccgcagctg caaatgcaag CD 201 taataatctt ggactgaata aatccgattt gtttgtcagt aaagcttggg CD 251 tagataactc caaatacctc cgaagatttc gtccacgagc tcaggggcgc CD 301 ggttacccca taaaaaaacc cacgtgtaaa gtaactattc aattgagctc CD 351 aaagtctatt gagaagtga SQ SEQUENCE 123 AA; MGNVIKSQVG AQALGKNVRV SVTKMQRIID RIRNCSYEEA LVLLEFMPYR ACYPVSQLVL SAAANASNNL GLNKSDLFVS KAWVDNSKYL RRFRPRAQGR GYPIKKPTCK VTIQLSSKSI EK* // ID AY178864_64 STANDARD; PRT; 93 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps19 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29431.2 FT PROTEIN_NAME : ribosomal protein S19 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 79653 - 79931 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 279 NT; CD 1 aCggcacgtt catcaaaaag aggtcccttt gttgctaatc acttaataag CD 51 agaaattaga aatctcaata tacagaaaaa aagaaaattg attacgactt CD 101 ggtctcgtgc ttccgcgata gttcctatta tgatcggtca cacaattgcc CD 151 gtccataatg gccgagagca tttgcctatt tacgtaaccg atcgaatggt CD 201 aggtcataaa ctgggggaat tcgtacccac ccgaaacttt cggggacatg CD 251 ccaaaagcga taaaggatct cgccgataa FT EDITED CDNA CD 1 aTggcacgtt catcaaaaag aggtcccttt gttgctaatc acttaataag CD 51 agaaattaga aatctcaata tacagaaaaa aagaaaattg attacgactt CD 101 ggtctcgtgc ttccgcgata gttcctatta tgatcggtca cacaattgcc CD 151 gtccataatg gccgagagca tttgcctatt tacgtaaccg atcgaatggt CD 201 aggtcataaa ctgggggaat tcgtacccac ccgaaacttt cggggacatg CD 251 ccaaaagcga taaaggatct cgccgataa SQ SEQUENCE 93 AA; MARSSKRGPF VANHLIREIR NLNIQKKRKL ITTWSRASAI VPIMIGHTIA VHNGREHLPI YVTDRMVGHK LGEFVPTRNF RGHAKSDKGS RR* // ID AY178864_65 STANDARD; PRT; 274 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29432.2 FT PROTEIN_NAME : ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 130/1 FT EDITING : 4 *(Tga) -> R(Cga) FT EDITING : 150 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 822 NT; CD 1 atggttatgT gatcctatag ggactatacc ccgaatgccc gaaagcaaga CD 51 cataccagaa gagggaagac ataaaccctg taagaaatta actcgcggca CD 101 aaatctctgg aaatgggcgc aataataggg gagtaataac aagtagacac CD 151 agggggggtg ctcacaagcg tctatatcgc gaaattgatt ttcgaaggaa CD 201 caagttggat atcgttggaa gagtaggaag tgtcgaatat gatcccaatc CD 251 gtaacgcctt catctgtttg atcaattatg tagatggtga taagaggtat CD 301 atcttacatc caaaaggaat gggaattgga gacatcgttt tatccagccc CD 351 aaacgcatct atctcagcag gaaatgcctt acctctgaca aaaatgcctt CD 401 tagggactat tatacataat atagaattga aatccggaag aggcgcaTaa CD 451 ttagttagat cagccggcac cgtagccaaa gtaattgcaa aggaaggtcg CD 501 actagctaca ctgagattac cttccggcga aattcgctta gtacctagag CD 551 attgtctagc aagtgtgggt cgagttggaa acgtagatat cagtaacaag CD 601 ggcttaaaaa aagcagggtc caaaaggtgg ttgggaagga gacccaaagt CD 651 tagaggttct gccatgaatc ccgtggatca tccacatgga gggggagaag CD 701 ggagaacctc catcggcaga aagaagccat taaccccctg ggggcgagtc CD 751 acactgggta aaagaagtcg agggaaaaaa tgtatcaatc ctctcatact CD 801 tcgtcgacgc aaaagttctt ga FT EDITED CDNA CD 1 atggttatgC gatcctatag ggactatacc ccgaatgccc gaaagcaaga CD 51 cataccagaa gagggaagac ataaaccctg taagaaatta actcgcggca CD 101 aaatctctgg aaatgggcgc aataataggg gagtaataac aagtagacac CD 151 agggggggtg ctcacaagcg tctatatcgc gaaattgatt ttcgaaggaa CD 201 caagttggat atcgttggaa gagtaggaag tgtcgaatat gatcccaatc CD 251 gtaacgcctt catctgtttg atcaattatg tagatggtga taagaggtat CD 301 atcttacatc caaaaggaat gggaattgga gacatcgttt tatccagccc CD 351 aaacgcatct atctcagcag gaaatgcctt acctctgaca aaaatgcctt CD 401 tagggactat tatacataat atagaattga aatccggaag aggcgcaCaa CD 451 ttagttagat cagccggcac cgtagccaaa gtaattgcaa aggaaggtcg CD 501 actagctaca ctgagattac cttccggcga aattcgctta gtacctagag CD 551 attgtctagc aagtgtgggt cgagttggaa acgtagatat cagtaacaag CD 601 ggcttaaaaa aagcagggtc caaaaggtgg ttgggaagga gacccaaagt CD 651 tagaggttct gccatgaatc ccgtggatca tccacatgga gggggagaag CD 701 ggagaacctc catcggcaga aagaagccat taaccccctg ggggcgagtc CD 751 acactgggta aaagaagtcg agggaaaaaa tgtatcaatc ctctcatact CD 801 tcgtcgacgc aaaagttctt ga SQ SEQUENCE 274 AA; MVMRSYRDYT PNARKQDIPE EGRHKPCKKL TRGKISGNGR NNRGVITSRH RGGAHKRLYR EIDFRRNKLD IVGRVGSVEY DPNRNAFICL INYVDGDKRY ILHPKGMGIG DIVLSSPNAS ISAGNALPLT KMPLGTIIHN IELKSGRGAQ LVRSAGTVAK VIAKEGRLAT LRLPSGEIRL VPRDCLASVG RVGNVDISNK GLKKAGSKRW LGRRPKVRGS AMNPVDHPHG GGEGRTSIGR KKPLTPWGRV TLGKRSRGKK CINPLILRRR KSS* // ID AY178864_66 STANDARD; PRT; 94 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl23 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29433.2 FT PROTEIN_NAME : ribosomal protein L23 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 81626 - 81907 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 50 T(aCa) -> I(aTa) FT EDITING : 88 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 282 NT; CD 1 aCggataaat taaaaaatca agtaattact ggaaagtcta ttcgtttatt CD 51 gcaacagaat caatatactt tccaagtgga tttgaaacta actaaaactg CD 101 gaatgaaaga ttggatcgaa cgattttttg acgtcaaggt ggaaggtaCa CD 151 aatagtagtc gaatgacaag taaaaatggg aaaaaaaaaa ataaattgaa CD 201 tattacttac gtaagctata aaaagatgat tgtaagacta aaaaagaatt CD 251 atttcattcc atCatttatg agtcagactt aa FT EDITED CDNA CD 1 aTggataaat taaaaaatca agtaattact ggaaagtcta ttcgtttatt CD 51 gcaacagaat caatatactt tccaagtgga tttgaaacta actaaaactg CD 101 gaatgaaaga ttggatcgaa cgattttttg acgtcaaggt ggaaggtaTa CD 151 aatagtagtc gaatgacaag taaaaatggg aaaaaaaaaa ataaattgaa CD 201 tattacttac gtaagctata aaaagatgat tgtaagacta aaaaagaatt CD 251 atttcattcc atTatttatg agtcagactt aa SQ SEQUENCE 94 AA; MDKLKNQVIT GKSIRLLQQN QYTFQVDLKL TKTGMKDWIE RFFDVKVEGI NSSRMTSKNG KKKNKLNITY VSYKKMIVRL KKNYFIPLFM SQT* // ID AY178864_67 STANDARD; PRT; 151 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT N-terminal not determined FT GENE : rps7 FT NOTE : start codon undetermined FT LOCUS_TAG : FT PROTEIN_ID : AAP29434.2 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 95417 - 95869 FT DIRECTIONS : positive FT EDITING : 1 A(gCg) -> V(gTg) FT EDITING : 47 *(Taa) -> Q(Caa) FT EDITING : 99 S(tCa) -> L(tTa) FT EDITING : 115 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 453 NT; CD 1 gCgaacgaaa ttagaaatat cgaatcggat ccaatttatc gcaatcgatt CD 51 ggcaaacatg ctagttgatc gtatcctgaa aaacggcaaa aaatcactag CD 101 cttatcagat tttttatcag gctatgaagc ggattagaTa aaagacaaat CD 151 aggaacccac tgtctgttct gcgacaggca gtgcgtgggg taactcccga CD 201 tgtagtcaca gaaaccaaac gtgtgggtgg atcaacttat cgagttccca CD 251 ttgaagtagt acctgcaaaa ggaaaagctt tggccatccg gtggtCattg CD 301 atcgcatgtc gaaaacgctc aggtcgaagt atggctttaa ggtCgagtga CD 351 tgaattgata gatgccgcca gaaattctgg gagtgccata cggaagaagg CD 401 aagagactca taaagttgcg gaagctaaca aagcttttgc ccacttccgt CD 451 tag FT EDITED CDNA CD 1 gTgaacgaaa ttagaaatat cgaatcggat ccaatttatc gcaatcgatt CD 51 ggcaaacatg ctagttgatc gtatcctgaa aaacggcaaa aaatcactag CD 101 cttatcagat tttttatcag gctatgaagc ggattagaCa aaagacaaat CD 151 aggaacccac tgtctgttct gcgacaggca gtgcgtgggg taactcccga CD 201 tgtagtcaca gaaaccaaac gtgtgggtgg atcaacttat cgagttccca CD 251 ttgaagtagt acctgcaaaa ggaaaagctt tggccatccg gtggtTattg CD 301 atcgcatgtc gaaaacgctc aggtcgaagt atggctttaa ggtTgagtga CD 351 tgaattgata gatgccgcca gaaattctgg gagtgccata cggaagaagg CD 401 aagagactca taaagttgcg gaagctaaca aagcttttgc ccacttccgt CD 451 tag SQ SEQUENCE 151 AA; VNEIRNIESD PIYRNRLANM LVDRILKNGK KSLAYQIFYQ AMKRIRQKTN RNPLSVLRQA VRGVTPDVVT ETKRVGGSTY RVPIEVVPAK GKALAIRWLL IACRKRSGRS MALRLSDELI DAARNSGSAI RKKEETHKVA EANKAFAHFR * // ID AY178864_69 STANDARD; PRT; 2105 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ycf2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29436.2 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 98198 - 104512 FT DIRECTIONS : positive FT EDITING : 63 *(Tga) -> R(Cga) FT EDITING : 65 L(Cta) -> L(Tta) FT EDITING : 1199 S(tCc) -> F(tTc) FT EDITING : 1232 *(Taa) -> Q(Caa) FT EDITING : 1251 S(agT) -> S(agC) FT EDITING : 1523 S(tCa) -> L(tTa) FT EDITING : 1531 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 6315 NT; CD 1 atggtaaaaa aggtgataga aaaaggaaga ggagtaaggg gccgagatta CD 51 ttcatctaaa gtttgggact tcttagaaat cgatgcatta aactacttct CD 101 ccgaatcatt gaaaaaccac tatctcgaag aacttgtagt tagtccagct CD 151 tccactgctg aacctttcat cagattatct gacttgTgat ttCtaagttt CD 201 actgtttcta cgtaatctgc gtcattcaat aatgaggggt agtggcgtca CD 251 ccctggaaat gctgatgttg ctggcgatac caatttttat gcattgcctg CD 301 agttacaaaa attcgattga taggggtttt gtattagcaa aagtcattga CD 351 tggaggtgag gggataagaa agaaacagac ggaaaattat ggcaatttct CD 401 cctacgattg cttcctccaa ttcaagagat ttttatccgt cggaagagat CD 451 gggaagagag aaatactgga gccctactac ttaggtttga acaaagatat CD 501 ttcaatttct gcaagttctt caaaggagga aagagaaatc cgttatgatg CD 551 tcacgactcc cttgccttcc ggtaggtgga aggcacgcat aatgaggagg CD 601 gattccctac tatttggcgg ggatagattc aaggggaaaa ctgaagggat CD 651 tcaagtggtt cgtgggggta ggtatctgca agatttagtt aggtttttca CD 701 aattctataa aaacttggta gtttccaaaa acggaagtga ctgccaccaa CD 751 aacaattttg attcgttgct tctccgggaa atctgtgaca agcaagatct CD 801 gggtcggtta caagcaatac ggttgggaaa caattcatta agttccgtag CD 851 tattgtaccc ctttgaatct gaatccgcag attcagccga tccccggagg CD 901 gacggatcgg catttccctc tgagcaagaa gtcttttcca acttgtattc CD 951 gtttacgtct cgtgagaaaa caatattgtt tcgcaactct atatctggat CD 1001 tagattatgg agaagatgag ggaggctttc ccgttctaca tgcttattca CD 1051 caagttagaa atcaattaat aaaccgactc accaacttcc tttcgataat CD 1101 taggaaatca aaccttcctc ttggtgggaa aatagttatt gacgtcagta CD 1151 ataggatcaa atccgagaga gtcttttttc catcgggaat gaaaaaaaat CD 1201 atgccgttta ccaaaatatc tggcaagaaa cttaggttag caagtggcgg CD 1251 atacttcgac ttcgttgaga ttttcccaac ctattttaaa gcatccttag CD 1301 agatacctag ggaaacaact aatcaaaatg gaaatactaa ttttttagac CD 1351 gaattggaag gaggggggaa cctagattca atttattctc tagttagatt CD 1401 atatgggcga aatagaatca tacctctcta ctcaacatac atatttcttc CD 1451 tccacgatta tttttgtgcg ttatccactg aatatttctt ccgaatcaaa CD 1501 tattggttgg atggctggac gggtggcaga gtatacatca gtttcacggg CD 1551 aattgcaact gaagaaacag tattcaagtg gaaggatgac gtagagcgtc CD 1601 tatcgaacga atatgttacc tcccatattg gtcagtgtag gaatgttcaa CD 1651 tcaaatctgt atagacggct cgatgcaaca cggaatttgt atgtttcgcc CD 1701 tgttaagaaa ttcttgggag aagcaatgaa gtacaacttg gcagaattaa CD 1751 tctgccgtgt gtcactagtg ggaaacgagt tgctaaataa gactggtgtc CD 1801 agtctccgta gtaccaatag acataccaag aaatattttc accgatttct CD 1851 cgatgtgtta tttctttcca aaatgattgt tgctgaggct actcgccaga CD 1901 aaattctgat agataccgtt gattactgca tcgaaaaatt ggacgacata CD 1951 gattttgaaa aattgaacaa aatggatcgt attgagcttg attttttctc CD 2001 aagtttatcc gatggttaca ttgacgaaga gatacttctt ttcaaaacaa CD 2051 ttcttgaaga aagaaaaagt ttcttagtcg agtctagact gttaacaagt CD 2101 gaaaaatcgg taggctcctc gactgcgcta aaacctgcgt cgaatttcac CD 2151 ctctctcggg ttgtcttgca tcgaagctat ccgagcagga ttctcgggtg CD 2201 aggctctttc tattatgggg agacaaaatt ggaatctgtt tgtgtgtgat CD 2251 ttaagccgtg gggggaattc aattaggaat attggtgaga gtcttccaaa CD 2301 aaacatttcc gatcaaatgg atgaaataaa caactcacct atacggagcc CD 2351 gggctggaaa caactttatc cagagaatca aaaggggttt cttcgtcggg CD 2401 aactgtagca atagttatct cgacgtgtta gaaaactttt atttgagctc CD 2451 cgacgagaaa gccatctcct catctgatat cctttcactt attcacctcc CD 2501 aattgtcaga ttcgttatca tccaattttt cgaaacaaac ggcaggggag CD 2551 gtagctgatc acttactcac accaattcaa cttatttcgc ctaacctgca CD 2601 tgaatccgcg accatagtaa ctcatttgga tggacttccc aattctattt CD 2651 cggatctgaa tgggttactg gcaagtttga gctcatcccc ccgtgaagcg CD 2701 acagactcgt tcctattttc gtgtagtaat gatggagttt ctttggagga CD 2751 ggcgtcgaga aactccgact cgtggtcgga tcatcagcga acccaacctc CD 2801 gtcggaatct gctggtatta gatcgagtca attcggagaa gtttttcaaa CD 2851 gatggattag actcgagaaa tggttccccc acgagtcaag tctatcgaaa CD 2901 cgggttgtct attgagtatt tttgggaacc gaaaaaattg gatacacctt CD 2951 attggtcgct aagattctca ttattcaatg gcgtaacatc aagatttata CD 3001 gcgggatcaa ttggggagga tgttacccgc caagatgcgg ggttcgcaga CD 3051 ttcatctgcc cgggaagaag ctacttgccc gtcccatttc atcaatttca CD 3101 atgaattatc agaagatttg aacagatata agatctcttg gattttctgg CD 3151 agagacagta tcggcgaaaa ttggagctta ttgggagatt atatacccct CD 3201 gttttttacc cccacctggt ggagatactt ctgcgatcta attacaaaag CD 3251 catatccgga aatagtactt aagataagtt acgactcaaa tcatgatctt CD 3301 cgtagaattt ctgaaggaat tgctaggggt ttagtaggta gcgcgaaggg CD 3351 ctatttactc cgaagcctgc aaaggctagg attgatattc ggaaacaatt CD 3401 ctattaatac tatatcatcc gagacagatc ttctcattct cgaaaaaatc CD 3451 cctgataaag cggagatttt acatccgggg gaatggtcgg tatctcaatt CD 3501 ttccaatagg cctatctcct attgctgcat cctctcaata ttacttgttc CD 3551 tcctgtcatt gaaacatcct ttgtctgccg tttcgggttc caattCcttt CD 3601 catttgtgga aacgttttgc tactattgac tatttaacag acccaatgcg CD 3651 tggatcctat ttgagaaagg taatgtattc ccccccgaca agcTaaatgt CD 3701 taacaagaga tctactaatt cattctctca atagattctt gaattgtgta CD 3751 agTaatatac tttttttcct tttcgtgaaa aatgaaattg attcgtggat CD 3801 atttcgtaga gaaagctctg atattttaga tagtaataaa gaactactga CD 3851 ctcaacattt ggtaacgact aagattctct acaggtatgc atcgaaatca CD 3901 aaattcaatt atgatttatc gagcaacaag atttttcatg aaccttaccc CD 3951 gcaagataga tccaacgttt tggcatactt acttcaattc tggcaaaatg CD 4001 atctattggg tcacaagatt cgtaagttgg atcctgcgga gaagtgggct CD 4051 ttttccgccc ttgggagaga tattctattt tcggcaacaa caaggcgaag CD 4101 agacagtcta ctaaatatgc catgtcgtga catacctatt tcactccaat CD 4151 cgggattatt accatccaaa ggaattttgc tagtaggacc tgtagaaact CD 4201 ggcagatcct ctcttattag agatgtagca tccaactcct actttccagt CD 4251 ggtgaaacta ccactcaaaa aattcatata caaccgatct tttttcaata CD 4301 atgtacgtgg aaatttcatc tcgaaagaga gcgtacaccg attaaatatc CD 4351 gtctttgaaa tagcgaaaga aatgtctcct tgtacattat ggattcaaga CD 4401 tattcatgaa ttgaatattt gtcgttcgta taataagcta gaagctgatc CD 4451 ccaaatttct actttgccaa atattgaaga gtattggtca caagctcggc CD 4501 aactccgaca tccgcgagaa tgtcgttatt gccacgactc acgtacctgc CD 4551 gaggatagat ccagcttCag tagctccgaa tcggttaaac Taattaataa CD 4601 attttcggag gtccaatggg cgtcaacgtc agaaagaatt gtcaattcta CD 4651 ttacgtatca aaggtttcga ggtaggggct aatccgactc ttcttgagag CD 4701 tactgtgtct ggaactgcag gttatagtaa acgagattta cttcttctcg CD 4751 ctaatgaagc gttattgata ggtacttcca aagggagaaa gtttgtatgt CD 4801 agcaacacaa ttggattagc tttgcatagg caacattcga ctgttagtga CD 4851 tatgggcaat gagatggaat ctaattctga atgggaaatc tcttcctaca CD 4901 agatggcaga agtaaagaat agtttgacag atatttctct cacaactttt CD 4951 ccatttattg gtcgtgacga gttaaaaatg cgattttatt acttgtctaa CD 5001 ctggtatgtg gaaccttcaa caaccgaatc aacaattgat gaattcacta CD 5051 tgtttttgca tctcccagag ctaatagcca aattagtagc tcgcgattcg CD 5101 ttccaaatgg ataggggaaa agaagataat ttcattgtta tcgacaaact CD 5151 cgtagagaat gacttaaacc tagcttgtgg cgtcctagaa aacctctcga CD 5201 ataatttccc acgtccggaa atttgtaggg gagagagccg gcgcagtaat CD 5251 agttttcctc cccctcttcc tattggaaaa cccaagtatt gctcaggtgt CD 5301 aacctctcta agtcgctctt ccaaatctct gaaaagaggg agaattagta CD 5351 gtctaaccga tttcgagatg caacagtcac ccgaattaag aaactcagcg CD 5401 gcagagatat cgcgtgagat tacttggtcc cgcaaggctt ggcgtctccg CD 5451 tttcctgcga agcgggactt acgaattgat gggggtatta tccgaaccca CD 5501 accatttgta taacttaatt cttctttact acaatcagaa ttacataccc CD 5551 caacaagatt ttgaattcag taagattagg ggaaagagaa gtaagtggcg CD 5601 cgagaaaagc gggtatcttt tcagcttcga gaaatctgtc actaatggaa CD 5651 cagataattc cattaaaaga ttggaaaacc gattggataa tatgttgtta CD 5701 cgtgagcaat ttctcgaatt gggaatctct ggcgattcat ctaatgagta CD 5751 tgaaacacat tgtgatcgat tgaatgaaat gactcgactc ttcggggggc CD 5801 gcttcatctg ggaccccatg cttctgttcc agccagaccc taacattcct CD 5851 tccctgcgcc gcaacttgtt gtcaacgaaa gaactggcac ggaggcttca CD 5901 caccatttac ggtatgagaa ggcagcgcct tcagaagatg tcaaataata CD 5951 aaattaaaga ttttttcctc tatagcgaag agaatccaaa attgaaaccc CD 6001 gactcatctc tcaatcggcg gaataatctt cctctggaag aggaggagcg CD 6051 agattccgaa tacgtcaggg aaacctcttc cgtagatata catctgcaat CD 6101 atccgcagat atttactccc gttcgtttgg gttgctacgc ggtagcggag CD 6151 gatttcccgg aacgatttct tcggtttagg cttctggttc atagaaacaa CD 6201 atggctgaga cggaaccgtt ccccatttcg ggattttctt atttataata CD 6251 tgttgcttga aacttatgaa tatctatcca atccgtttcg gtttggtaaa CD 6301 gcatcactgg attga FT EDITED CDNA CD 1 atggtaaaaa aggtgataga aaaaggaaga ggagtaaggg gccgagatta CD 51 ttcatctaaa gtttgggact tcttagaaat cgatgcatta aactacttct CD 101 ccgaatcatt gaaaaaccac tatctcgaag aacttgtagt tagtccagct CD 151 tccactgctg aacctttcat cagattatct gacttgCgat ttTtaagttt CD 201 actgtttcta cgtaatctgc gtcattcaat aatgaggggt agtggcgtca CD 251 ccctggaaat gctgatgttg ctggcgatac caatttttat gcattgcctg CD 301 agttacaaaa attcgattga taggggtttt gtattagcaa aagtcattga CD 351 tggaggtgag gggataagaa agaaacagac ggaaaattat ggcaatttct CD 401 cctacgattg cttcctccaa ttcaagagat ttttatccgt cggaagagat CD 451 gggaagagag aaatactgga gccctactac ttaggtttga acaaagatat CD 501 ttcaatttct gcaagttctt caaaggagga aagagaaatc cgttatgatg CD 551 tcacgactcc cttgccttcc ggtaggtgga aggcacgcat aatgaggagg CD 601 gattccctac tatttggcgg ggatagattc aaggggaaaa ctgaagggat CD 651 tcaagtggtt cgtgggggta ggtatctgca agatttagtt aggtttttca CD 701 aattctataa aaacttggta gtttccaaaa acggaagtga ctgccaccaa CD 751 aacaattttg attcgttgct tctccgggaa atctgtgaca agcaagatct CD 801 gggtcggtta caagcaatac ggttgggaaa caattcatta agttccgtag CD 851 tattgtaccc ctttgaatct gaatccgcag attcagccga tccccggagg CD 901 gacggatcgg catttccctc tgagcaagaa gtcttttcca acttgtattc CD 951 gtttacgtct cgtgagaaaa caatattgtt tcgcaactct atatctggat CD 1001 tagattatgg agaagatgag ggaggctttc ccgttctaca tgcttattca CD 1051 caagttagaa atcaattaat aaaccgactc accaacttcc tttcgataat CD 1101 taggaaatca aaccttcctc ttggtgggaa aatagttatt gacgtcagta CD 1151 ataggatcaa atccgagaga gtcttttttc catcgggaat gaaaaaaaat CD 1201 atgccgttta ccaaaatatc tggcaagaaa cttaggttag caagtggcgg CD 1251 atacttcgac ttcgttgaga ttttcccaac ctattttaaa gcatccttag CD 1301 agatacctag ggaaacaact aatcaaaatg gaaatactaa ttttttagac CD 1351 gaattggaag gaggggggaa cctagattca atttattctc tagttagatt CD 1401 atatgggcga aatagaatca tacctctcta ctcaacatac atatttcttc CD 1451 tccacgatta tttttgtgcg ttatccactg aatatttctt ccgaatcaaa CD 1501 tattggttgg atggctggac gggtggcaga gtatacatca gtttcacggg CD 1551 aattgcaact gaagaaacag tattcaagtg gaaggatgac gtagagcgtc CD 1601 tatcgaacga atatgttacc tcccatattg gtcagtgtag gaatgttcaa CD 1651 tcaaatctgt atagacggct cgatgcaaca cggaatttgt atgtttcgcc CD 1701 tgttaagaaa ttcttgggag aagcaatgaa gtacaacttg gcagaattaa CD 1751 tctgccgtgt gtcactagtg ggaaacgagt tgctaaataa gactggtgtc CD 1801 agtctccgta gtaccaatag acataccaag aaatattttc accgatttct CD 1851 cgatgtgtta tttctttcca aaatgattgt tgctgaggct actcgccaga CD 1901 aaattctgat agataccgtt gattactgca tcgaaaaatt ggacgacata CD 1951 gattttgaaa aattgaacaa aatggatcgt attgagcttg attttttctc CD 2001 aagtttatcc gatggttaca ttgacgaaga gatacttctt ttcaaaacaa CD 2051 ttcttgaaga aagaaaaagt ttcttagtcg agtctagact gttaacaagt CD 2101 gaaaaatcgg taggctcctc gactgcgcta aaacctgcgt cgaatttcac CD 2151 ctctctcggg ttgtcttgca tcgaagctat ccgagcagga ttctcgggtg CD 2201 aggctctttc tattatgggg agacaaaatt ggaatctgtt tgtgtgtgat CD 2251 ttaagccgtg gggggaattc aattaggaat attggtgaga gtcttccaaa CD 2301 aaacatttcc gatcaaatgg atgaaataaa caactcacct atacggagcc CD 2351 gggctggaaa caactttatc cagagaatca aaaggggttt cttcgtcggg CD 2401 aactgtagca atagttatct cgacgtgtta gaaaactttt atttgagctc CD 2451 cgacgagaaa gccatctcct catctgatat cctttcactt attcacctcc CD 2501 aattgtcaga ttcgttatca tccaattttt cgaaacaaac ggcaggggag CD 2551 gtagctgatc acttactcac accaattcaa cttatttcgc ctaacctgca CD 2601 tgaatccgcg accatagtaa ctcatttgga tggacttccc aattctattt CD 2651 cggatctgaa tgggttactg gcaagtttga gctcatcccc ccgtgaagcg CD 2701 acagactcgt tcctattttc gtgtagtaat gatggagttt ctttggagga CD 2751 ggcgtcgaga aactccgact cgtggtcgga tcatcagcga acccaacctc CD 2801 gtcggaatct gctggtatta gatcgagtca attcggagaa gtttttcaaa CD 2851 gatggattag actcgagaaa tggttccccc acgagtcaag tctatcgaaa CD 2901 cgggttgtct attgagtatt tttgggaacc gaaaaaattg gatacacctt CD 2951 attggtcgct aagattctca ttattcaatg gcgtaacatc aagatttata CD 3001 gcgggatcaa ttggggagga tgttacccgc caagatgcgg ggttcgcaga CD 3051 ttcatctgcc cgggaagaag ctacttgccc gtcccatttc atcaatttca CD 3101 atgaattatc agaagatttg aacagatata agatctcttg gattttctgg CD 3151 agagacagta tcggcgaaaa ttggagctta ttgggagatt atatacccct CD 3201 gttttttacc cccacctggt ggagatactt ctgcgatcta attacaaaag CD 3251 catatccgga aatagtactt aagataagtt acgactcaaa tcatgatctt CD 3301 cgtagaattt ctgaaggaat tgctaggggt ttagtaggta gcgcgaaggg CD 3351 ctatttactc cgaagcctgc aaaggctagg attgatattc ggaaacaatt CD 3401 ctattaatac tatatcatcc gagacagatc ttctcattct cgaaaaaatc CD 3451 cctgataaag cggagatttt acatccgggg gaatggtcgg tatctcaatt CD 3501 ttccaatagg cctatctcct attgctgcat cctctcaata ttacttgttc CD 3551 tcctgtcatt gaaacatcct ttgtctgccg tttcgggttc caattTcttt CD 3601 catttgtgga aacgttttgc tactattgac tatttaacag acccaatgcg CD 3651 tggatcctat ttgagaaagg taatgtattc ccccccgaca agcCaaatgt CD 3701 taacaagaga tctactaatt cattctctca atagattctt gaattgtgta CD 3751 agCaatatac tttttttcct tttcgtgaaa aatgaaattg attcgtggat CD 3801 atttcgtaga gaaagctctg atattttaga tagtaataaa gaactactga CD 3851 ctcaacattt ggtaacgact aagattctct acaggtatgc atcgaaatca CD 3901 aaattcaatt atgatttatc gagcaacaag atttttcatg aaccttaccc CD 3951 gcaagataga tccaacgttt tggcatactt acttcaattc tggcaaaatg CD 4001 atctattggg tcacaagatt cgtaagttgg atcctgcgga gaagtgggct CD 4051 ttttccgccc ttgggagaga tattctattt tcggcaacaa caaggcgaag CD 4101 agacagtcta ctaaatatgc catgtcgtga catacctatt tcactccaat CD 4151 cgggattatt accatccaaa ggaattttgc tagtaggacc tgtagaaact CD 4201 ggcagatcct ctcttattag agatgtagca tccaactcct actttccagt CD 4251 ggtgaaacta ccactcaaaa aattcatata caaccgatct tttttcaata CD 4301 atgtacgtgg aaatttcatc tcgaaagaga gcgtacaccg attaaatatc CD 4351 gtctttgaaa tagcgaaaga aatgtctcct tgtacattat ggattcaaga CD 4401 tattcatgaa ttgaatattt gtcgttcgta taataagcta gaagctgatc CD 4451 ccaaatttct actttgccaa atattgaaga gtattggtca caagctcggc CD 4501 aactccgaca tccgcgagaa tgtcgttatt gccacgactc acgtacctgc CD 4551 gaggatagat ccagcttTag tagctccgaa tcggttaaac Caattaataa CD 4601 attttcggag gtccaatggg cgtcaacgtc agaaagaatt gtcaattcta CD 4651 ttacgtatca aaggtttcga ggtaggggct aatccgactc ttcttgagag CD 4701 tactgtgtct ggaactgcag gttatagtaa acgagattta cttcttctcg CD 4751 ctaatgaagc gttattgata ggtacttcca aagggagaaa gtttgtatgt CD 4801 agcaacacaa ttggattagc tttgcatagg caacattcga ctgttagtga CD 4851 tatgggcaat gagatggaat ctaattctga atgggaaatc tcttcctaca CD 4901 agatggcaga agtaaagaat agtttgacag atatttctct cacaactttt CD 4951 ccatttattg gtcgtgacga gttaaaaatg cgattttatt acttgtctaa CD 5001 ctggtatgtg gaaccttcaa caaccgaatc aacaattgat gaattcacta CD 5051 tgtttttgca tctcccagag ctaatagcca aattagtagc tcgcgattcg CD 5101 ttccaaatgg ataggggaaa agaagataat ttcattgtta tcgacaaact CD 5151 cgtagagaat gacttaaacc tagcttgtgg cgtcctagaa aacctctcga CD 5201 ataatttccc acgtccggaa atttgtaggg gagagagccg gcgcagtaat CD 5251 agttttcctc cccctcttcc tattggaaaa cccaagtatt gctcaggtgt CD 5301 aacctctcta agtcgctctt ccaaatctct gaaaagaggg agaattagta CD 5351 gtctaaccga tttcgagatg caacagtcac ccgaattaag aaactcagcg CD 5401 gcagagatat cgcgtgagat tacttggtcc cgcaaggctt ggcgtctccg CD 5451 tttcctgcga agcgggactt acgaattgat gggggtatta tccgaaccca CD 5501 accatttgta taacttaatt cttctttact acaatcagaa ttacataccc CD 5551 caacaagatt ttgaattcag taagattagg ggaaagagaa gtaagtggcg CD 5601 cgagaaaagc gggtatcttt tcagcttcga gaaatctgtc actaatggaa CD 5651 cagataattc cattaaaaga ttggaaaacc gattggataa tatgttgtta CD 5701 cgtgagcaat ttctcgaatt gggaatctct ggcgattcat ctaatgagta CD 5751 tgaaacacat tgtgatcgat tgaatgaaat gactcgactc ttcggggggc CD 5801 gcttcatctg ggaccccatg cttctgttcc agccagaccc taacattcct CD 5851 tccctgcgcc gcaacttgtt gtcaacgaaa gaactggcac ggaggcttca CD 5901 caccatttac ggtatgagaa ggcagcgcct tcagaagatg tcaaataata CD 5951 aaattaaaga ttttttcctc tatagcgaag agaatccaaa attgaaaccc CD 6001 gactcatctc tcaatcggcg gaataatctt cctctggaag aggaggagcg CD 6051 agattccgaa tacgtcaggg aaacctcttc cgtagatata catctgcaat CD 6101 atccgcagat atttactccc gttcgtttgg gttgctacgc ggtagcggag CD 6151 gatttcccgg aacgatttct tcggtttagg cttctggttc atagaaacaa CD 6201 atggctgaga cggaaccgtt ccccatttcg ggattttctt atttataata CD 6251 tgttgcttga aacttatgaa tatctatcca atccgtttcg gtttggtaaa CD 6301 gcatcactgg attga SQ SEQUENCE 2105 AA; MVKKVIEKGR GVRGRDYSSK VWDFLEIDAL NYFSESLKNH YLEELVVSPA STAEPFIRLS DLRFLSLLFL RNLRHSIMRG SGVTLEMLML LAIPIFMHCL SYKNSIDRGF VLAKVIDGGE GIRKKQTENY GNFSYDCFLQ FKRFLSVGRD GKREILEPYY LGLNKDISIS ASSSKEEREI RYDVTTPLPS GRWKARIMRR DSLLFGGDRF KGKTEGIQVV RGGRYLQDLV RFFKFYKNLV VSKNGSDCHQ NNFDSLLLRE ICDKQDLGRL QAIRLGNNSL SSVVLYPFES ESADSADPRR DGSAFPSEQE VFSNLYSFTS REKTILFRNS ISGLDYGEDE GGFPVLHAYS QVRNQLINRL TNFLSIIRKS NLPLGGKIVI DVSNRIKSER VFFPSGMKKN MPFTKISGKK LRLASGGYFD FVEIFPTYFK ASLEIPRETT NQNGNTNFLD ELEGGGNLDS IYSLVRLYGR NRIIPLYSTY IFLLHDYFCA LSTEYFFRIK YWLDGWTGGR VYISFTGIAT EETVFKWKDD VERLSNEYVT SHIGQCRNVQ SNLYRRLDAT RNLYVSPVKK FLGEAMKYNL AELICRVSLV GNELLNKTGV SLRSTNRHTK KYFHRFLDVL FLSKMIVAEA TRQKILIDTV DYCIEKLDDI DFEKLNKMDR IELDFFSSLS DGYIDEEILL FKTILEERKS FLVESRLLTS EKSVGSSTAL KPASNFTSLG LSCIEAIRAG FSGEALSIMG RQNWNLFVCD LSRGGNSIRN IGESLPKNIS DQMDEINNSP IRSRAGNNFI QRIKRGFFVG NCSNSYLDVL ENFYLSSDEK AISSSDILSL IHLQLSDSLS SNFSKQTAGE VADHLLTPIQ LISPNLHESA TIVTHLDGLP NSISDLNGLL ASLSSSPREA TDSFLFSCSN DGVSLEEASR NSDSWSDHQR TQPRRNLLVL DRVNSEKFFK DGLDSRNGSP TSQVYRNGLS IEYFWEPKKL DTPYWSLRFS LFNGVTSRFI AGSIGEDVTR QDAGFADSSA REEATCPSHF INFNELSEDL NRYKISWIFW RDSIGENWSL LGDYIPLFFT PTWWRYFCDL ITKAYPEIVL KISYDSNHDL RRISEGIARG LVGSAKGYLL RSLQRLGLIF GNNSINTISS ETDLLILEKI PDKAEILHPG EWSVSQFSNR PISYCCILSI LLVLLSLKHP LSAVSGSNFF HLWKRFATID YLTDPMRGSY LRKVMYSPPT SQMLTRDLLI HSLNRFLNCV SNILFFLFVK NEIDSWIFRR ESSDILDSNK ELLTQHLVTT KILYRYASKS KFNYDLSSNK IFHEPYPQDR SNVLAYLLQF WQNDLLGHKI RKLDPAEKWA FSALGRDILF SATTRRRDSL LNMPCRDIPI SLQSGLLPSK GILLVGPVET GRSSLIRDVA SNSYFPVVKL PLKKFIYNRS FFNNVRGNFI SKESVHRLNI VFEIAKEMSP CTLWIQDIHE LNICRSYNKL EADPKFLLCQ ILKSIGHKLG NSDIRENVVI ATTHVPARID PALVAPNRLN QLINFRRSNG RQRQKELSIL LRIKGFEVGA NPTLLESTVS GTAGYSKRDL LLLANEALLI GTSKGRKFVC SNTIGLALHR QHSTVSDMGN EMESNSEWEI SSYKMAEVKN SLTDISLTTF PFIGRDELKM RFYYLSNWYV EPSTTESTID EFTMFLHLPE LIAKLVARDS FQMDRGKEDN FIVIDKLVEN DLNLACGVLE NLSNNFPRPE ICRGESRRSN SFPPPLPIGK PKYCSGVTSL SRSSKSLKRG RISSLTDFEM QQSPELRNSA AEISREITWS RKAWRLRFLR SGTYELMGVL SEPNHLYNLI LLYYNQNYIP QQDFEFSKIR GKRSKWREKS GYLFSFEKSV TNGTDNSIKR LENRLDNMLL REQFLELGIS GDSSNEYETH CDRLNEMTRL FGGRFIWDPM LLFQPDPNIP SLRRNLLSTK ELARRLHTIY GMRRQRLQKM SNNKIKDFFL YSEENPKLKP DSSLNRRNNL PLEEEERDSE YVRETSSVDI HLQYPQIFTP VRLGCYAVAE DFPERFLRFR LLVHRNKWLR RNRSPFRDFL IYNMLLETYE YLSNPFRFGK ASLD* // ID AY178864_70 STANDARD; PRT; 730 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhF FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29437.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 105718 - 107907 FT DIRECTIONS : negative FT EDITING : 13 S(tCg) -> L(tTg) FT EDITING : 52 T(aCg) -> M(aTg) FT EDITING : 132 T(acC) -> T(acT) FT EDITING : 138 S(tCa) -> L(tTa) FT EDITING : 211 *(Tga) -> R(Cga) FT EDITING : 332 S(tCa) -> L(tTa) FT EDITING : 400 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 2190 NT; CD 1 gtgaaacttt caaacgaata cgcttggatt attccttCgt gtccattaat CD 51 agcttcttgt tgcactggat cgttatcatt cttttttcca agagttgcaa CD 101 ggggtttcca tcgcctgtgc gcattgctca acgttttttc attagctatt CD 151 tctaCgtttg tgtcacttgc catatttcag gaacaatttg tgaaaaaccc CD 201 gattcagcaa tatttatgga tttggatacc gagaagtact ttttgcgtag CD 251 aaataggctt tttagtcgat tcacttactt tagtaatgtc actactggtt CD 301 accactgtag gcgtgttagt tatgatttat agcgatagtt atatgtgtta CD 351 tgaccgggga tataccaggt tttatgctta tttgagtttg tttacCgcgt CD 401 caatgttagg gtCagttctc agccccaact taatacagct ttacgtgttt CD 451 tgggagttag ttggaatgtg ttcctatcta ttagtaggtt tttggtttgc CD 501 taggtcaagt gccgcaaatg cttgtcaaaa agcttttgtt accaaccgca CD 551 taggagattt tggattactt ttaggtattc taggtattta ctggacaact CD 601 ggtagtttcg agatttccga attgtgtgat Tgatttgcca aattaaaaga CD 651 aattggattt tccaatccaa tcttgacaaa tatcattgct tttttactcc CD 701 ttgcaggtcc agttgctaaa tctgctcaat ttccgcttca cgtatggctg CD 751 ccagatgcaa tggagggacc cacgcccata tcggccctta ttcacgcagc CD 801 tactatggta gctgccggga tttttttcat tgcccgaatt tatggtctaa CD 851 tttctacgct tcccttagtg atgcaagcca gctcttggct tggtggagca CD 901 acggctttgc tgggtgccac attagctctt gcacaaagag atctaaaaaa CD 951 gggtcttgct tattccacca tgtctcagtt gggatatatg gtttCagccc CD 1001 taggcatcgg cgcttaccaa tctgctctct tccatctcgt gacgcatgcc CD 1051 tattcaaaag ctttattatt tctcggagcc ggttcagtaa ttcactcaat CD 1101 tgaaaaagtt gttggatatt cacctaacag gagtcaaaac atgtttttca CD 1151 tgggtggctt acgtaagtac atgccaatta ctggaactac ttttcttcCg CD 1201 ggtacccttt ctctatctgg aataccgccc ttagcctgtt tttggtccaa CD 1251 agatgagatt attcacgaaa gttggttaag ttctcttcca cttggaattc CD 1301 tagcttctgg cacagcaggt cttacggcgt tttatatgtt tcgtatctat CD 1351 ctccttactt tcgaggggga tttttgcact attaaaacgg attgggttga CD 1401 ctttaaccat tttgcgccat tgtccataag tatgtggggt gaaactgaag CD 1451 gaaatctttc actaaatcaa attaatcaaa atgttgcatc ggtacgattg CD 1501 ggaataacaa aaaacaaagg gttttcgtca tcatatctag caaacccaaa CD 1551 tggaattact aacgtccatt acgatcagag cttgccgaag cctaaagaat CD 1601 cgtcttctgc catgacattt tctctagtga tgcttgcaat acccactaca CD 1651 ttagtaggac tactgggaat taatctcata ggagaaactg ccaattttga CD 1701 attatccccg gagtggttaa ttaatccagt tcactttttc gaacttagta CD 1751 aatctttcaa tatttatata aaaatattgc taaactcgcg tagctcactt CD 1801 attttatctt tttttggaat atttttttcc ttcattattt acaaaaaaag CD 1851 ttataaatat ttttatatta ctaaaaaatt agttggattt accaaattag CD 1901 ttagtaaatt tgggttgctt gttcaatctt ggtcactaaa tcggggttat CD 1951 attgattact attatgatat atgctttgtg cgtaatctaa gatctttaag CD 2001 taagtcactt tcagattttg atcgttacgg aatcgacggt tttgtcaacg CD 2051 taatcggagc cttaaatttt tttggaggag agtttatacg ttacggagaa CD 2101 aatggtagga tatcttatta cttattcata attatttttg gagctatttt CD 2151 atcatcagta ctaatcttca tctttttacc ttttccataa FT EDITED CDNA CD 1 gtgaaacttt caaacgaata cgcttggatt attccttTgt gtccattaat CD 51 agcttcttgt tgcactggat cgttatcatt cttttttcca agagttgcaa CD 101 ggggtttcca tcgcctgtgc gcattgctca acgttttttc attagctatt CD 151 tctaTgtttg tgtcacttgc catatttcag gaacaatttg tgaaaaaccc CD 201 gattcagcaa tatttatgga tttggatacc gagaagtact ttttgcgtag CD 251 aaataggctt tttagtcgat tcacttactt tagtaatgtc actactggtt CD 301 accactgtag gcgtgttagt tatgatttat agcgatagtt atatgtgtta CD 351 tgaccgggga tataccaggt tttatgctta tttgagtttg tttacTgcgt CD 401 caatgttagg gtTagttctc agccccaact taatacagct ttacgtgttt CD 451 tgggagttag ttggaatgtg ttcctatcta ttagtaggtt tttggtttgc CD 501 taggtcaagt gccgcaaatg cttgtcaaaa agcttttgtt accaaccgca CD 551 taggagattt tggattactt ttaggtattc taggtattta ctggacaact CD 601 ggtagtttcg agatttccga attgtgtgat Cgatttgcca aattaaaaga CD 651 aattggattt tccaatccaa tcttgacaaa tatcattgct tttttactcc CD 701 ttgcaggtcc agttgctaaa tctgctcaat ttccgcttca cgtatggctg CD 751 ccagatgcaa tggagggacc cacgcccata tcggccctta ttcacgcagc CD 801 tactatggta gctgccggga tttttttcat tgcccgaatt tatggtctaa CD 851 tttctacgct tcccttagtg atgcaagcca gctcttggct tggtggagca CD 901 acggctttgc tgggtgccac attagctctt gcacaaagag atctaaaaaa CD 951 gggtcttgct tattccacca tgtctcagtt gggatatatg gtttTagccc CD 1001 taggcatcgg cgcttaccaa tctgctctct tccatctcgt gacgcatgcc CD 1051 tattcaaaag ctttattatt tctcggagcc ggttcagtaa ttcactcaat CD 1101 tgaaaaagtt gttggatatt cacctaacag gagtcaaaac atgtttttca CD 1151 tgggtggctt acgtaagtac atgccaatta ctggaactac ttttcttcTg CD 1201 ggtacccttt ctctatctgg aataccgccc ttagcctgtt tttggtccaa CD 1251 agatgagatt attcacgaaa gttggttaag ttctcttcca cttggaattc CD 1301 tagcttctgg cacagcaggt cttacggcgt tttatatgtt tcgtatctat CD 1351 ctccttactt tcgaggggga tttttgcact attaaaacgg attgggttga CD 1401 ctttaaccat tttgcgccat tgtccataag tatgtggggt gaaactgaag CD 1451 gaaatctttc actaaatcaa attaatcaaa atgttgcatc ggtacgattg CD 1501 ggaataacaa aaaacaaagg gttttcgtca tcatatctag caaacccaaa CD 1551 tggaattact aacgtccatt acgatcagag cttgccgaag cctaaagaat CD 1601 cgtcttctgc catgacattt tctctagtga tgcttgcaat acccactaca CD 1651 ttagtaggac tactgggaat taatctcata ggagaaactg ccaattttga CD 1701 attatccccg gagtggttaa ttaatccagt tcactttttc gaacttagta CD 1751 aatctttcaa tatttatata aaaatattgc taaactcgcg tagctcactt CD 1801 attttatctt tttttggaat atttttttcc ttcattattt acaaaaaaag CD 1851 ttataaatat ttttatatta ctaaaaaatt agttggattt accaaattag CD 1901 ttagtaaatt tgggttgctt gttcaatctt ggtcactaaa tcggggttat CD 1951 attgattact attatgatat atgctttgtg cgtaatctaa gatctttaag CD 2001 taagtcactt tcagattttg atcgttacgg aatcgacggt tttgtcaacg CD 2051 taatcggagc cttaaatttt tttggaggag agtttatacg ttacggagaa CD 2101 aatggtagga tatcttatta cttattcata attatttttg gagctatttt CD 2151 atcatcagta ctaatcttca tctttttacc ttttccataa SQ SEQUENCE 730 AA; VKLSNEYAWI IPLCPLIASC CTGSLSFFFP RVARGFHRLC ALLNVFSLAI SMFVSLAIFQ EQFVKNPIQQ YLWIWIPRST FCVEIGFLVD SLTLVMSLLV TTVGVLVMIY SDSYMCYDRG YTRFYAYLSL FTASMLGLVL SPNLIQLYVF WELVGMCSYL LVGFWFARSS AANACQKAFV TNRIGDFGLL LGILGIYWTT GSFEISELCD RFAKLKEIGF SNPILTNIIA FLLLAGPVAK SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGIFFIARI YGLISTLPLV MQASSWLGGA TALLGATLAL AQRDLKKGLA YSTMSQLGYM VLALGIGAYQ SALFHLVTHA YSKALLFLGA GSVIHSIEKV VGYSPNRSQN MFFMGGLRKY MPITGTTFLL GTLSLSGIPP LACFWSKDEI IHESWLSSLP LGILASGTAG LTAFYMFRIY LLTFEGDFCT IKTDWVDFNH FAPLSISMWG ETEGNLSLNQ INQNVASVRL GITKNKGFSS SYLANPNGIT NVHYDQSLPK PKESSSAMTF SLVMLAIPTT LVGLLGINLI GETANFELSP EWLINPVHFF ELSKSFNIYI KILLNSRSSL ILSFFGIFFS FIIYKKSYKY FYITKKLVGF TKLVSKFGLL VQSWSLNRGY IDYYYDICFV RNLRSLSKSL SDFDRYGIDG FVNVIGALNF FGGEFIRYGE NGRISYYLFI IIFGAILSSV LIFIFLPFP* // ID AY178864_71 STANDARD; PRT; 128 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl21 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29438.2 FT PROTEIN_NAME : ribosomal protein L21 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 108188 - 108571 FT DIRECTIONS : positive FT EDITING : 31 H(Cac) -> Y(Tac) FT EDITING : 100 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 384 NT; CD 1 atggaaaaat ggaaagagag agtcagaatt ggtggatacg caattattga CD 51 tattggagga aaacaactac gagtacaacc gggaagattc Cacgatgttc CD 101 gtcattttcc ctcaaattta aatacacggg gatctgacac aaaagtatcc CD 151 atgggtcgag tcttgcttat tcgtgacgga tctaaaatag atattggttc CD 201 tccgtggcta gcgaatgcag tcgtcaaggg acggatctta cataactgtt CD 251 tcgaagataa attggtaata aaaaagattt tttccaaaag aaaaacgTga CD 301 gggagtcgag gatgcagagg aagtataatt agatttgcaa ttgattccat CD 351 ccattttaat tgtagtaatg caactaacaa ataa FT EDITED CDNA CD 1 atggaaaaat ggaaagagag agtcagaatt ggtggatacg caattattga CD 51 tattggagga aaacaactac gagtacaacc gggaagattc Tacgatgttc CD 101 gtcattttcc ctcaaattta aatacacggg gatctgacac aaaagtatcc CD 151 atgggtcgag tcttgcttat tcgtgacgga tctaaaatag atattggttc CD 201 tccgtggcta gcgaatgcag tcgtcaaggg acggatctta cataactgtt CD 251 tcgaagataa attggtaata aaaaagattt tttccaaaag aaaaacgCga CD 301 gggagtcgag gatgcagagg aagtataatt agatttgcaa ttgattccat CD 351 ccattttaat tgtagtaatg caactaacaa ataa SQ SEQUENCE 128 AA; MEKWKERVRI GGYAIIDIGG KQLRVQPGRF YDVRHFPSNL NTRGSDTKVS MGRVLLIRDG SKIDIGSPWL ANAVVKGRIL HNCFEDKLVI KKIFSKRKTR GSRGCRGSII RFAIDSIHFN CSNATNK* // ID AY178864_73 STANDARD; PRT; 317 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ccsA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29440.2 FT PROTEIN_NAME : cytochrome c biogenesis protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 110129 - 111079 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 2 T(aCa) -> I(aTa) FT EDITING : 86 S(tCa) -> L(tTa) FT EDITING : 114 S(tCa) -> L(tTa) FT EDITING : 130 S(tCg) -> L(tTg) FT EDITING : 137 T(aCg) -> M(aTg) FT EDITING : 149 S(tCa) -> L(tTa) FT EDITING : 154 S(tCg) -> L(tTg) FT EDITING : 247 R(Cgg) -> W(Tgg) FT EDITING : 264 R(Cgg) -> W(Tgg) FT EDITING : 269 T(aCt) -> I(aTt) FT EDITING : 286 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 951 NT; CD 1 aCgaCatata caggcataga gtacatattt gttaatattt cgtttgtgat CD 51 gttttttttc gtaactttgt tgaacctcat caatttattt tacaaaattg CD 101 ataaaattga tcatttcagc aaaaatagca tgacaattgc ttttttctgt CD 151 actacaggat ttctgattac tcgctacctc caaaccaggc acttaccgct CD 201 aggtaatctg tacgagtcgc taatgtttct atcgtggggc ttctccttat CD 251 tatattCaat tttagaagtt agagaccaaa ttggtttatc gcatgcagta CD 301 ctcgcacctg gtgctatgtt gattcacgcc ttcgcaactt Caagtcttcc CD 351 ccagcaaatg cgttccccca cgttgttagt acccgcttCg cagtctcagt CD 401 ggttaatgaC gcatgtaagt gcgatgttga ttagttatat aacctCattg CD 451 tgtgggtctt Cgctagcaat aactttatta agtttattct acggcaaggt CD 501 aggtagtgta actttggaac acaagtttga aaaacaatct ttcttttttt CD 551 tgatgaaccc tcgtaagaat ctgtggaaac aaaccggtgc agaaaactat CD 601 tcctacttcc tcatctccaa ctcacggaag tgccaattga ttaattgctt CD 651 ggataagtgg gcttgccaaa caataagttt ggggttttct ctgttgacta CD 701 ttggtatact ttctggcgca gtgtgggcta atgaagctCg gggatcttac CD 751 tggagttggg acccaaaaga gacttgggcg ttggtaactC ggttagtata CD 801 tgctaCttac cttcatacaa aggtggataa gagaaagatg ggggagggac CD 851 cggccaCgac agcatctatg ggatttttct tagtttggat ttgtttcttg CD 901 ggagtcaatt tattaggagt tggattgcat aattacggat ggttagcgta CD 951 a FT EDITED CDNA CD 1 aTgaTatata caggcataga gtacatattt gttaatattt cgtttgtgat CD 51 gttttttttc gtaactttgt tgaacctcat caatttattt tacaaaattg CD 101 ataaaattga tcatttcagc aaaaatagca tgacaattgc ttttttctgt CD 151 actacaggat ttctgattac tcgctacctc caaaccaggc acttaccgct CD 201 aggtaatctg tacgagtcgc taatgtttct atcgtggggc ttctccttat CD 251 tatattTaat tttagaagtt agagaccaaa ttggtttatc gcatgcagta CD 301 ctcgcacctg gtgctatgtt gattcacgcc ttcgcaactt Taagtcttcc CD 351 ccagcaaatg cgttccccca cgttgttagt acccgcttTg cagtctcagt CD 401 ggttaatgaT gcatgtaagt gcgatgttga ttagttatat aacctTattg CD 451 tgtgggtctt Tgctagcaat aactttatta agtttattct acggcaaggt CD 501 aggtagtgta actttggaac acaagtttga aaaacaatct ttcttttttt CD 551 tgatgaaccc tcgtaagaat ctgtggaaac aaaccggtgc agaaaactat CD 601 tcctacttcc tcatctccaa ctcacggaag tgccaattga ttaattgctt CD 651 ggataagtgg gcttgccaaa caataagttt ggggttttct ctgttgacta CD 701 ttggtatact ttctggcgca gtgtgggcta atgaagctTg gggatcttac CD 751 tggagttggg acccaaaaga gacttgggcg ttggtaactT ggttagtata CD 801 tgctaTttac cttcatacaa aggtggataa gagaaagatg ggggagggac CD 851 cggccaTgac agcatctatg ggatttttct tagtttggat ttgtttcttg CD 901 ggagtcaatt tattaggagt tggattgcat aattacggat ggttagcgta CD 951 a SQ SEQUENCE 317 AA; MIYTGIEYIF VNISFVMFFF VTLLNLINLF YKIDKIDHFS KNSMTIAFFC TTGFLITRYL QTRHLPLGNL YESLMFLSWG FSLLYLILEV RDQIGLSHAV LAPGAMLIHA FATLSLPQQM RSPTLLVPAL QSQWLMMHVS AMLISYITLL CGSLLAITLL SLFYGKVGSV TLEHKFEKQS FFFLMNPRKN LWKQTGAENY SYFLISNSRK CQLINCLDKW ACQTISLGFS LLTIGILSGA VWANEAWGSY WSWDPKETWA LVTWLVYAIY LHTKVDKRKM GEGPAMTASM GFFLVWICFL GVNLLGVGLH NYGWLA* // ID AY178864_74 STANDARD; PRT; 498 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29441.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 111496 - 112989 FT DIRECTIONS : negative FT EDITING : 7 R(Cgg) -> W(Tgg) FT EDITING : 47 P(cCa) -> L(cTa) FT EDITING : 458 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 1494 NT; CD 1 atgattagta atgtacctCg gttaacggta atcgtttccc tcccaatttt CD 51 tgctggtctg atgattccaa tcctgcctcg taatggaaac agagtcactc CD 101 gatggtatac tctgggtatt tgcatattgg aatttttacC aattacttac CD 151 atattttatt gtcattttcg aatcgattat cagtcaatcc agttgttgga CD 201 aacttttaac tggataaaca atatccatct tcactggtca ttaggaatcg CD 251 acgggctttc cctcggtctt gtcatattga cgggttttgc aactactctg CD 301 gcaaccttat cggcttggcc tatcactcgt aatacacggc tattttactt CD 351 tttaatgctg attatgtatg gcggccaaat tggattattt gtttcccgag CD 401 acattttgct ttttttcttt atgtgggaaa tagaactcat tccagtctat CD 451 ttactactat gtttatgggg cggaaaaaga cgtttatact cagccacgaa CD 501 atttgtccta tacacagctg gtggctcaat atttttattg gtggcggctt CD 551 tgactatgag tttttatggt agcgaggttc cttcttttaa tattcaggat CD 601 ttgatacata aatcatatcc cctttcgtta gaagtactaa tctacgtagg CD 651 tttcttggtg gcttatgccg tgaaattgcc tatctttccc ttccatacct CD 701 ggttaccaga tactcatggg gaggcacact acagcacatg tatgttatta CD 751 gccggagtgc tgttaaaaat gggtggatac ggacttattc gaattaattt CD 801 ggaattatta actcatgcac attttttact tggatcgtgg atgatgttat CD 851 ttggagcgat tcaaattata tacgcctcct taatttcaat gagtcagcgc CD 901 aattttaaaa gaagaatagc ttattcttcc atttctcata tgggttttgt CD 951 aaccatcgga atcggttctt ttacagagac aggtattaat ggagctatat CD 1001 tacaaatgat ttcccacggt ttgattggag ctgccttatt tttcctcgca CD 1051 ggtacctgtt acgacagaac tcgaacttat ctactagatc aattgggagg CD 1101 ggctgctatt tcaatgccta aattatttac catgtttagc accctttcgt CD 1151 tggcttctct tgcattaccg ggaatgagtg gtttcgtgtc ggaattgcta CD 1201 gtttttttgg gagttgttac ttctaatcaa tattcttttg cctttaaggc CD 1251 gggaattacg gtgctagagg gaattggtac ggtattaact cccatctact CD 1301 tactatcaat gttacgccaa ctattttatg gttacaggtt ttttgacaaa CD 1351 tcaaatcctt actcaattga tcCtggtcca agagaattat ttattctaat CD 1401 ttgttttctc ctaccaatac taggtatcgg tttataccca aatttgattt CD 1451 tatctattgg gagtactgaa atcccttccc tcccacttac atga FT EDITED CDNA CD 1 atgattagta atgtacctTg gttaacggta atcgtttccc tcccaatttt CD 51 tgctggtctg atgattccaa tcctgcctcg taatggaaac agagtcactc CD 101 gatggtatac tctgggtatt tgcatattgg aatttttacT aattacttac CD 151 atattttatt gtcattttcg aatcgattat cagtcaatcc agttgttgga CD 201 aacttttaac tggataaaca atatccatct tcactggtca ttaggaatcg CD 251 acgggctttc cctcggtctt gtcatattga cgggttttgc aactactctg CD 301 gcaaccttat cggcttggcc tatcactcgt aatacacggc tattttactt CD 351 tttaatgctg attatgtatg gcggccaaat tggattattt gtttcccgag CD 401 acattttgct ttttttcttt atgtgggaaa tagaactcat tccagtctat CD 451 ttactactat gtttatgggg cggaaaaaga cgtttatact cagccacgaa CD 501 atttgtccta tacacagctg gtggctcaat atttttattg gtggcggctt CD 551 tgactatgag tttttatggt agcgaggttc cttcttttaa tattcaggat CD 601 ttgatacata aatcatatcc cctttcgtta gaagtactaa tctacgtagg CD 651 tttcttggtg gcttatgccg tgaaattgcc tatctttccc ttccatacct CD 701 ggttaccaga tactcatggg gaggcacact acagcacatg tatgttatta CD 751 gccggagtgc tgttaaaaat gggtggatac ggacttattc gaattaattt CD 801 ggaattatta actcatgcac attttttact tggatcgtgg atgatgttat CD 851 ttggagcgat tcaaattata tacgcctcct taatttcaat gagtcagcgc CD 901 aattttaaaa gaagaatagc ttattcttcc atttctcata tgggttttgt CD 951 aaccatcgga atcggttctt ttacagagac aggtattaat ggagctatat CD 1001 tacaaatgat ttcccacggt ttgattggag ctgccttatt tttcctcgca CD 1051 ggtacctgtt acgacagaac tcgaacttat ctactagatc aattgggagg CD 1101 ggctgctatt tcaatgccta aattatttac catgtttagc accctttcgt CD 1151 tggcttctct tgcattaccg ggaatgagtg gtttcgtgtc ggaattgcta CD 1201 gtttttttgg gagttgttac ttctaatcaa tattcttttg cctttaaggc CD 1251 gggaattacg gtgctagagg gaattggtac ggtattaact cccatctact CD 1301 tactatcaat gttacgccaa ctattttatg gttacaggtt ttttgacaaa CD 1351 tcaaatcctt actcaattga tcTtggtcca agagaattat ttattctaat CD 1401 ttgttttctc ctaccaatac taggtatcgg tttataccca aatttgattt CD 1451 tatctattgg gagtactgaa atcccttccc tcccacttac atga SQ SEQUENCE 498 AA; MISNVPWLTV IVSLPIFAGL MIPILPRNGN RVTRWYTLGI CILEFLLITY IFYCHFRIDY QSIQLLETFN WINNIHLHWS LGIDGLSLGL VILTGFATTL ATLSAWPITR NTRLFYFLML IMYGGQIGLF VSRDILLFFF MWEIELIPVY LLLCLWGGKR RLYSATKFVL YTAGGSIFLL VAALTMSFYG SEVPSFNIQD LIHKSYPLSL EVLIYVGFLV AYAVKLPIFP FHTWLPDTHG EAHYSTCMLL AGVLLKMGGY GLIRINLELL THAHFLLGSW MMLFGAIQII YASLISMSQR NFKRRIAYSS ISHMGFVTIG IGSFTETGIN GAILQMISHG LIGAALFFLA GTCYDRTRTY LLDQLGGAAI SMPKLFTMFS TLSLASLALP GMSGFVSELL VFLGVVTSNQ YSFAFKAGIT VLEGIGTVLT PIYLLSMLRQ LFYGYRFFDK SNPYSIDLGP RELFILICFL LPILGIGLYP NLILSIGSTE IPSLPLT* // ID AY178864_76 STANDARD; PRT; 101 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhE FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29443.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 113708 - 114010 FT DIRECTIONS : negative FT EDITING : 2 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atcaCgtttg aacaaggact aattctgagt gcttatcttt tatgtgtagg CD 51 ttttttcggt ctaattacga gtagaaatat ggttagggca ctgatgagtc CD 101 tagagctaat ctttaacgcg attactttaa atttcattac actttcaaat CD 151 ctttttgaca accgagagac tggggaaata tttacattat ttgtaatagc CD 201 cgttgcagct gctgaagctg ctaccgggtt agctattgcc ctttctatac CD 251 atcgaaacag gagatctact cgtatcgatc aatcgaattt gttaaaatgg CD 301 tga FT EDITED CDNA CD 1 atcaTgtttg aacaaggact aattctgagt gcttatcttt tatgtgtagg CD 51 ttttttcggt ctaattacga gtagaaatat ggttagggca ctgatgagtc CD 101 tagagctaat ctttaacgcg attactttaa atttcattac actttcaaat CD 151 ctttttgaca accgagagac tggggaaata tttacattat ttgtaatagc CD 201 cgttgcagct gctgaagctg ctaccgggtt agctattgcc ctttctatac CD 251 atcgaaacag gagatctact cgtatcgatc aatcgaattt gttaaaatgg CD 301 tga SQ SEQUENCE 101 AA; IMFEQGLILS AYLLCVGFFG LITSRNMVRA LMSLELIFNA ITLNFITLSN LFDNRETGEI FTLFVIAVAA AEAATGLAIA LSIHRNRRST RIDQSNLLKW * // ID AY178864_77 STANDARD; PRT; 198 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhG FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29444.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 114113 - 114706 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 14 P(cCg) -> L(cTg) FT EDITING : 28 S(tCa) -> L(tTa) FT EDITING : 39 P(cCg) -> L(cTg) FT EDITING : 41 S(tCg) -> L(tTg) FT EDITING : 53 S(tCg) -> L(tTg) FT EDITING : 64 P(cCa) -> L(cTa) FT EDITING : 79 T(aCg) -> M(aTg) FT EDITING : 109 T(aCa) -> I(aTa) FT EDITING : 120 F(tTt) -> S(tCt) FT CODON_START : 1 CL CDNALEN 594 NT; CD 1 aCgaatatct cagaattaat tcacgatttt gttttagcac Cggtagaatt CD 51 gggtatcctg ctgggaagtt taggcgcagt atCacttgtc aatacagtta CD 101 attccgcttt ttctcCgggg tCggttttca cttgtatatc tttattatac CD 151 tttgtttCga atgcagattt cgtagctgct gcgcagttgc Cagtttatgt CD 201 aggagccata aatgttttaa ccgtatttgc cgtcaCgatt actgatgaac CD 251 cggcaggttc tgagactact gcccgtggca taggctatat cattactgca CD 301 gggacttgca caatcctttt ttcaaCatta tcttttgtga ttcacaatac CD 351 taaatggtTt gacttaagtc tcattcctca atcgggaatt tctacatcag CD 401 gcacactcgg aagtaatgtc caacaacttg gatataaatt attgggagaa CD 451 ttcgtaatac cattcgaact tctctcgata cttctcctag ctgctttagt CD 501 gggagcaatt aatctagcac gcaatgaaga tgcatttatt gtcaataaga CD 551 aatcagctgc ttcagcaccc tacaaaaatt ctacattttt ctaa FT EDITED CDNA CD 1 aTgaatatct cagaattaat tcacgatttt gttttagcac Tggtagaatt CD 51 gggtatcctg ctgggaagtt taggcgcagt atTacttgtc aatacagtta CD 101 attccgcttt ttctcTgggg tTggttttca cttgtatatc tttattatac CD 151 tttgtttTga atgcagattt cgtagctgct gcgcagttgc Tagtttatgt CD 201 aggagccata aatgttttaa ccgtatttgc cgtcaTgatt actgatgaac CD 251 cggcaggttc tgagactact gcccgtggca taggctatat cattactgca CD 301 gggacttgca caatcctttt ttcaaTatta tcttttgtga ttcacaatac CD 351 taaatggtCt gacttaagtc tcattcctca atcgggaatt tctacatcag CD 401 gcacactcgg aagtaatgtc caacaacttg gatataaatt attgggagaa CD 451 ttcgtaatac cattcgaact tctctcgata cttctcctag ctgctttagt CD 501 gggagcaatt aatctagcac gcaatgaaga tgcatttatt gtcaataaga CD 551 aatcagctgc ttcagcaccc tacaaaaatt ctacattttt ctaa SQ SEQUENCE 198 AA; MNISELIHDF VLALVELGIL LGSLGAVLLV NTVNSAFSLG LVFTCISLLY FVLNADFVAA AQLLVYVGAI NVLTVFAVMI TDEPAGSETT ARGIGYIITA GTCTILFSIL SFVIHNTKWS DLSLIPQSGI STSGTLGSNV QQLGYKLLGE FVIPFELLSI LLLAALVGAI NLARNEDAFI VNKKSAASAP YKNSTFF* // ID AY178864_78 STANDARD; PRT; 168 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29445.2 FT PROTEIN_NAME : NADH dehydrogenase subunit I FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 114892 - 115395 FT DIRECTIONS : negative FT EDITING : 33 S(tCg) -> L(tTg) FT EDITING : 70 R(Cgc) -> C(Tgc) FT CODON_START : 1 CL CDNALEN 504 NT; CD 1 atgtttttgg caataattaa gtttcaaaat tatggtcaac aagttctcga CD 51 agccgcaaac tacattggtc aaggatttgc agttaccttg gatcattCga CD 101 atcgtttacc cataactgtt cagtatccat atgaaaaaaa attaccatcc CD 151 gaacgatttc gtggacgtat ccatttcgaa tttgataaat gtattgcctg CD 201 cgaagtaCgc gttcgcgtat gcccgatcaa tctcccagtt gtcgattgga CD 251 tattcctgaa agatgtgaaa aagaaaaaat tgaaaaacta tagcattgat CD 301 tttggagttt gcatattctg tgggaactgc gttgagtact gcccaacaaa CD 351 ttgtctgtcg atgaccgaag agtatgaact ttccagttac aatcgtcatg CD 401 aactcaattt tgatcaaacg gctttggggc gtttacctcc tcccgcctct CD 451 gaagatgttt caattcaatt agttttgaat tcaagaaatt cttttaggag CD 501 ataa FT EDITED CDNA CD 1 atgtttttgg caataattaa gtttcaaaat tatggtcaac aagttctcga CD 51 agccgcaaac tacattggtc aaggatttgc agttaccttg gatcattTga CD 101 atcgtttacc cataactgtt cagtatccat atgaaaaaaa attaccatcc CD 151 gaacgatttc gtggacgtat ccatttcgaa tttgataaat gtattgcctg CD 201 cgaagtaTgc gttcgcgtat gcccgatcaa tctcccagtt gtcgattgga CD 251 tattcctgaa agatgtgaaa aagaaaaaat tgaaaaacta tagcattgat CD 301 tttggagttt gcatattctg tgggaactgc gttgagtact gcccaacaaa CD 351 ttgtctgtcg atgaccgaag agtatgaact ttccagttac aatcgtcatg CD 401 aactcaattt tgatcaaacg gctttggggc gtttacctcc tcccgcctct CD 451 gaagatgttt caattcaatt agttttgaat tcaagaaatt cttttaggag CD 501 ataa SQ SEQUENCE 168 AA; MFLAIIKFQN YGQQVLEAAN YIGQGFAVTL DHLNRLPITV QYPYEKKLPS ERFRGRIHFE FDKCIACEVC VRVCPINLPV VDWIFLKDVK KKKLKNYSID FGVCIFCGNC VEYCPTNCLS MTEEYELSSY NRHELNFDQT ALGRLPPPAS EDVSIQLVLN SRNSFRR* // ID AY178864_79 STANDARD; PRT; 372 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29446.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 187/1 FT EDITING : 44 T(aCg) -> M(aTg) FT EDITING : 47 S(tCa) -> L(tTa) FT EDITING : 50 A(gCa) -> V(gTa) FT EDITING : 54 *(Tga) -> R(Cga) FT EDITING : 129 S(tCg) -> L(tTg) FT EDITING : 263 H(Cac) -> Y(Tac) FT EDITING : 267 S(tCa) -> L(tTa) FT EDITING : 271 P(cCa) -> L(cTa) FT EDITING : 356 S(tCg) -> L(tTg) FT EDITING : 359 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 1116 NT; CD 1 atgataaata gtaccgaatt ttgcagaaat aaactaattc atctttttga CD 51 cgagttagaa attacaatga atctttccaa atcaatttgg atttttgctt CD 101 ctactcttct tctagttttg ggagtcacga CgggagtttC agtaattgCa CD 151 tggctcgaaT gaaaagtatc cgcgggggtt cagcaacgaa ttggaccaga CD 201 atatgcaggt ccactaggga ttattcaatc cctagctgat ggaattaaac CD 251 ttcttttaaa agaagatatc attccagcta agggtaatgc ctggttattt CD 301 gccgccggac cggctgtcgt agtcacacca gtatttatta cttatttggt CD 351 aatacctttt ggccaacata tcatattatc cgattCggga ataggtgtct CD 401 ttttctggat tgctatctca agtattgtac ccctgggtct tcttgtggca CD 451 gggtacggtt caaataataa atattctttt ttaggcggtc tcagagcggc CD 501 ggctcaatct atcagttacg aaatacccct agctctatgt gtactgtcga CD 551 tatccctact atccggtagc ttgagtacag ttgatatagt tgagacacaa CD 601 tccaaatatg gtttttgggg gtggaatctg tggcgtcagc caataggatt CD 651 tatagccttt ttcatctctt cattggcaga atgtgagaga ttgccatttg CD 701 acttgccaga ggcggaggag gagttagtgg ctggttacca aactgaatat CD 751 tcaggaataa aatttggctt attttatgtt ggttctCacc taaatttgtC CD 801 agcttcctca cCatttgtag tagttctcta tttgggtgga tgggatttct CD 851 caattccttt tgtcgaaaat tttggacaaa ttgtttcaac ttcaagtgtc CD 901 attgacaagt ctctcgacac gttgaaaccg attgtagagg ttgccactac CD 951 attatccaaa tcctattttt acctattttt ctccatcttg acaagatgga CD 1001 ctctacctag agtcaggatg gatcaattac tagatctcgg atggaaattt CD 1051 ctactgccca ttgcttCggg aaattCgttg ctgacagctt cgtttcgaat CD 1101 attactcata agttga FT EDITED CDNA CD 1 atgataaata gtaccgaatt ttgcagaaat aaactaattc atctttttga CD 51 cgagttagaa attacaatga atctttccaa atcaatttgg atttttgctt CD 101 ctactcttct tctagttttg ggagtcacga TgggagtttT agtaattgTa CD 151 tggctcgaaC gaaaagtatc cgcgggggtt cagcaacgaa ttggaccaga CD 201 atatgcaggt ccactaggga ttattcaatc cctagctgat ggaattaaac CD 251 ttcttttaaa agaagatatc attccagcta agggtaatgc ctggttattt CD 301 gccgccggac cggctgtcgt agtcacacca gtatttatta cttatttggt CD 351 aatacctttt ggccaacata tcatattatc cgattTggga ataggtgtct CD 401 ttttctggat tgctatctca agtattgtac ccctgggtct tcttgtggca CD 451 gggtacggtt caaataataa atattctttt ttaggcggtc tcagagcggc CD 501 ggctcaatct atcagttacg aaatacccct agctctatgt gtactgtcga CD 551 tatccctact atccggtagc ttgagtacag ttgatatagt tgagacacaa CD 601 tccaaatatg gtttttgggg gtggaatctg tggcgtcagc caataggatt CD 651 tatagccttt ttcatctctt cattggcaga atgtgagaga ttgccatttg CD 701 acttgccaga ggcggaggag gagttagtgg ctggttacca aactgaatat CD 751 tcaggaataa aatttggctt attttatgtt ggttctTacc taaatttgtT CD 801 agcttcctca cTatttgtag tagttctcta tttgggtgga tgggatttct CD 851 caattccttt tgtcgaaaat tttggacaaa ttgtttcaac ttcaagtgtc CD 901 attgacaagt ctctcgacac gttgaaaccg attgtagagg ttgccactac CD 951 attatccaaa tcctattttt acctattttt ctccatcttg acaagatgga CD 1001 ctctacctag agtcaggatg gatcaattac tagatctcgg atggaaattt CD 1051 ctactgccca ttgcttTggg aaattTgttg ctgacagctt cgtttcgaat CD 1101 attactcata agttga SQ SEQUENCE 372 AA; MINSTEFCRN KLIHLFDELE ITMNLSKSIW IFASTLLLVL GVTMGVLVIV WLERKVSAGV QQRIGPEYAG PLGIIQSLAD GIKLLLKEDI IPAKGNAWLF AAGPAVVVTP VFITYLVIPF GQHIILSDLG IGVFFWIAIS SIVPLGLLVA GYGSNNKYSF LGGLRAAAQS ISYEIPLALC VLSISLLSGS LSTVDIVETQ SKYGFWGWNL WRQPIGFIAF FISSLAECER LPFDLPEAEE ELVAGYQTEY SGIKFGLFYV GSYLNLLASS LFVVVLYLGG WDFSIPFVEN FGQIVSTSSV IDKSLDTLKP IVEVATTLSK SYFYLFFSIL TRWTLPRVRM DQLLDLGWKF LLPIALGNLL LTASFRILLI S* // ID AY178864_80 STANDARD; PRT; 395 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhH FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29447.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 117499 - 118683 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 32 S(tCg) -> L(tTg) FT EDITING : 106 P(cCt) -> L(cTt) FT EDITING : 361 T(aCa) -> I(aTa) FT EDITING : 386 D(gaC) -> D(gaT) FT CODON_START : 1 CL CDNALEN 1185 NT; CD 1 aCgagtattc gtcttgaaga tattgatcca gttgtagtaa gcatgggtcc CD 51 tcatcatccc tcaatgcacg gtgttctccg gcttgttgtt gcttCgcagg CD 101 gtgaaaatgt tgttgattgt gaactaatat tgggatatct gcatcgagga CD 151 atggaaaaaa ttgccgaaaa tcgaacaact tcgcaatatc ttccctatgt CD 201 gacgagatgg gattatttag ctactatgtt tactgaagca gttacggtca CD 251 atgcaccgga aaaattggca aatattcaga tacccgaaag agctagttac CD 301 atacgcgtaa tcatgcCtga attaagtaga atagcatctc acctgttatg CD 351 gctcgggcca ttcctagcgg atatcggtgc acaaaccccc ttcttttata CD 401 tatttcggga aagggagatg atttatgact tgttcgaggc ggctacgggt CD 451 atgagaatga tgcataacta ctttcgaatt gggggagttg ccgcggattt CD 501 gccatacgga tggatcgata aatgcttgga tttttgccaa tattgcctgc CD 551 caaaaatcta tgagtatgag cgattagtta cgaaaaatcc tattttctta CD 601 aaacgagtgc agggagtagg tttcataaac agacaggaag ccatcaattg CD 651 gggattatct ggaccttcgt tacgagcttc aggggttcaa tgggatctcc CD 701 gcaaaattga tcattatgag tgttatgata agctggattg gcagattcag CD 751 tggcaggggg aaggagattc tttggctcga tatttagtac gaatcgacga CD 801 aatgaaagaa tcaataaata ttcttcgaca agctttaaaa cttctcccgg CD 851 gaggtccata tgaaaatcta gagggtcggc gtcttgtgca aaagaaagac CD 901 aaaatagatt ggaacggttt caactaccag tttgtcggaa agaaatcttc CD 951 tcctactctt aaattgccta aacaggaaca ttatgtaaga gtagaagctc CD 1001 ctaagggaga attgggaatt tttttaattg gagatgatag tgtctttcct CD 1051 tggagattga aaattcgtcc acctggtttt aCaaatttgc agattgtccc CD 1101 tcaattgatt aggggaatga aactcgcgga tattgtgaca atattaggta CD 1151 gtatagaCat catcatggga gaggttgatc gttag FT EDITED CDNA CD 1 aTgagtattc gtcttgaaga tattgatcca gttgtagtaa gcatgggtcc CD 51 tcatcatccc tcaatgcacg gtgttctccg gcttgttgtt gcttTgcagg CD 101 gtgaaaatgt tgttgattgt gaactaatat tgggatatct gcatcgagga CD 151 atggaaaaaa ttgccgaaaa tcgaacaact tcgcaatatc ttccctatgt CD 201 gacgagatgg gattatttag ctactatgtt tactgaagca gttacggtca CD 251 atgcaccgga aaaattggca aatattcaga tacccgaaag agctagttac CD 301 atacgcgtaa tcatgcTtga attaagtaga atagcatctc acctgttatg CD 351 gctcgggcca ttcctagcgg atatcggtgc acaaaccccc ttcttttata CD 401 tatttcggga aagggagatg atttatgact tgttcgaggc ggctacgggt CD 451 atgagaatga tgcataacta ctttcgaatt gggggagttg ccgcggattt CD 501 gccatacgga tggatcgata aatgcttgga tttttgccaa tattgcctgc CD 551 caaaaatcta tgagtatgag cgattagtta cgaaaaatcc tattttctta CD 601 aaacgagtgc agggagtagg tttcataaac agacaggaag ccatcaattg CD 651 gggattatct ggaccttcgt tacgagcttc aggggttcaa tgggatctcc CD 701 gcaaaattga tcattatgag tgttatgata agctggattg gcagattcag CD 751 tggcaggggg aaggagattc tttggctcga tatttagtac gaatcgacga CD 801 aatgaaagaa tcaataaata ttcttcgaca agctttaaaa cttctcccgg CD 851 gaggtccata tgaaaatcta gagggtcggc gtcttgtgca aaagaaagac CD 901 aaaatagatt ggaacggttt caactaccag tttgtcggaa agaaatcttc CD 951 tcctactctt aaattgccta aacaggaaca ttatgtaaga gtagaagctc CD 1001 ctaagggaga attgggaatt tttttaattg gagatgatag tgtctttcct CD 1051 tggagattga aaattcgtcc acctggtttt aTaaatttgc agattgtccc CD 1101 tcaattgatt aggggaatga aactcgcgga tattgtgaca atattaggta CD 1151 gtatagaTat catcatggga gaggttgatc gttag SQ SEQUENCE 395 AA; MSIRLEDIDP VVVSMGPHHP SMHGVLRLVV ALQGENVVDC ELILGYLHRG MEKIAENRTT SQYLPYVTRW DYLATMFTEA VTVNAPEKLA NIQIPERASY IRVIMLELSR IASHLLWLGP FLADIGAQTP FFYIFREREM IYDLFEAATG MRMMHNYFRI GGVAADLPYG WIDKCLDFCQ YCLPKIYEYE RLVTKNPIFL KRVQGVGFIN RQEAINWGLS GPSLRASGVQ WDLRKIDHYE CYDKLDWQIQ WQGEGDSLAR YLVRIDEMKE SINILRQALK LLPGGPYENL EGRRLVQKKD KIDWNGFNYQ FVGKKSSPTL KLPKQEHYVR VEAPKGELGI FLIGDDSVFP WRLKIRPPGF INLQIVPQLI RGMKLADIVT ILGSIDIIMG EVDR* // ID AY178864_82 STANDARD; PRT; 1692 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ycf1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29449.2 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 119372 - 124447 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 1155 C(tgC) -> C(tgT) FT CODON_START : 1 CL CDNALEN 5076 NT; CD 1 aCgaatacaa agatattgtt gtcactgccc tggccaaaac tgatggatcc CD 51 ctatatgcta cttggtttct actatgggtt acttacaaca ttacccgtgg CD 101 gaccttcgca aatcctatgt gtgagatctt ttcttttggg tgggaatcta CD 151 agtgggctaa tttctatcag tgggtcggta ttggcacaac taataactgc CD 201 atcatcaatc tactgctcgc caatttatct attactgcta aggccacatt CD 251 tactaactat tgtggcaata ccgtatacac ttctcttttg tctggtaatc CD 301 aaggattttc caaattatca gattttgcgt cccgtgacat cattacgtga CD 351 ctcacgagta gctagattat ttttgataag tttctttttt caaatattga CD 401 acccaataat gttaccaaat agtgtgttaa caagactgat ttatctatac CD 451 ttcttcaggt atagcaccaa tacagttttt atggtatcta cttttatggg CD 501 ttggttaact ggtcaggcag cattcaattt tttttctaga ctacttttaa CD 551 gtcgggtgaa aggggattcc ccgatattat atctagtggc gaaacgtttt CD 601 atatatgcaa cttttagtat tgtttccatc tcatatgctg tggcatattt CD 651 gggtagagct ccggtctctt tttggaccaa aaagttcatg aatgaatctc CD 701 atgatagaga aatgaatctt tgggaaattg ctgaatattc ggatctattg CD 751 tggtggtttt ttaaaccgtg gcccacttct ttttttgatc cctctagggc CD 801 aaatcggagt aatcgatttg tcaaaaatcg tcgattccac atgaataata CD 851 ctttttataa ggggagaaca tccacatact tttttgaaaa atgtttaact CD 901 gatggtaaag agagattatc ttttctagca ttgcccagtt tgtcaatttt CD 951 tgggaaagaa atgtatcaat cgatggcaaa gtcccgtaga tcttttggaa CD 1001 tccgtttatc atatcaaaat tgggtttcaa aaaaattagc gaaaacaaaa CD 1051 ttctttgaga aagaattaac ggatcaaatc aagttgttag acactggttc CD 1101 ttcattctca aagacgatga gtagaaaaac aagattgatg ggcggtaaaa CD 1151 ggaggagaat accccgcacc tatgacccct ttgtcaataa cttccgcata CD 1201 agaattccag tttcacagac atttttgtta gaagatgact tgggtttgag CD 1251 tctatgggaa tgggataaat tggcgacgga aagaaaaaat agaaaggcaa CD 1301 aaaaaactgt caggataaat gctatcaagg ataagatttt cacaaaagat CD 1351 cggagatgga aacatggata tggaaatccg ctaccgtggg aacctttgcc CD 1401 gtcgagaagt aaacgcatgt tctattttat atttgaaaat cgagctttat CD 1451 acgactacga tctacaaaat atcttgaaaa agataaaatc ttcgcccaca CD 1501 ctcgatgtta cttggaaaga aataatggat ttagattatg aagaccatat CD 1551 cttatttttg acctacttag aggtgggatg ctgtcaccga tttggttgga CD 1601 tatctccact caaagccttt ttgagaaaaa gttctaagag tttgtcaaat CD 1651 gtagaacgga gaatacgcag actaaataaa attgggaatt tgagtatgga CD 1701 tctggctcga tatactatcc tgtattttga aaataatttt gatataccgg CD 1751 gaggagacgg cgattttcgc tacagaaaat tgcgtaatgt gggtatcact CD 1801 ttcgcaaaag gaaagcccag atcagaaaga ttaatgaagc gatatgcaaa CD 1851 agtatctgat ttccgtagaa aatttctgaa gggctctatg cgttctagga CD 1901 ggcgaaagac cttgctctgg aaagcacttc aagaaaaaat acgttcgtct CD 1951 tttttcctca gatcagcaga aaggacaatc ttgtttcaat cacttattga CD 2001 gcgactgaca acttcaagcc gtgaagaaaa atttagtgag ttggaaaaag CD 2051 acacggatta cgaatttcag aaacaactac tagatatctc tttatcagcg CD 2101 aaaaggagtt taatcggtga atcgaagctt actcgttcag ctatagcagc CD 2151 tagatcagac ataggtccta tccataatgg aaggggatat atgctagttt CD 2201 ttcaatccag atttcgaaag tttattaaac taccagtact tatagtcttg CD 2251 aaaaatatcg gacgtatttt actccgtcaa aattccgaat ggaataagga CD 2301 ctggacggga tggaagaaag aaattcatat caattgtacg tttgatggcg CD 2351 aagacttttc acaagatgag ttacctccac gatggttaag agaaggtatt CD 2401 cagataaaaa ttgtgtatcc gtttcaactg aagccttggc acacagatgg CD 2451 gaatgaaaaa caacatactc ttcaaagaaa acacaaagaa attggatcta CD 2501 aaagccggga attgaaaagc aaaaggaaat tgaagcaaaa gaagcacaaa CD 2551 tttacttatt taactgtttt agggtatcag acggatatac cttttggaac CD 2601 tattcaaaag aaaacttctt tttggaaacc tgttcggaga aagttaattc CD 2651 ggatttgtaa aagaagcttg cctcgtcaaa ttaaacaagc ctatcaattt CD 2701 attcactcta ggttcgagaa agtatcaaaa ttgaattcaa ctccatcgaa CD 2751 gaaattgaat cttatttcca atctaagaca aggtggaaaa ttactaagtg CD 2801 actatagtct ggatgagaaa agttggatga aaacctcatc taccaattac CD 2851 gtaaatgaaa agacaaaacc taactgtaat gtaatttcaa acagtgagag CD 2901 atttattgct attggtgggg aaatgagtcc ggctaatgtt actcgtaaac CD 2951 aacttgttac tcgggaccag gtagaaagag aatttttaat gagtatcgtt CD 3001 gcagttgact ccaaaaacct tttggacgaa aaaatagatg acccatattc CD 3051 caaaataact tcgaaggatt tggaaacagg cgatactaca tcaggtgaca CD 3101 taaatcttgt gaattccacc aaatttgaac ggaagcaatt ggtcgattcc CD 3151 gaggaagcag gattaagttt atatttactt gtcagagaat taattgaaac CD 3201 atttgtttca gtactaataa acttgccttt cacaattaac aggatttttg CD 3251 ttcattactt cactgaattc ctcgcgttgt atacaaaatt ggcagggata CD 3301 ttggataaca ttaatgaggg aagcaattta tcaacaagaa gtaaatcgtt CD 3351 gcaatttgac ttgccatctc aaacctgtat ttatattgat atgtggaaca CD 3401 tcggtatgag gggcagctta aacctggatc tgttagttaa tgataaaaga CD 3451 agtagcagta attgCggagt aaaaaataga cagagtggca tctatgttga CD 3501 aaccgacggt gtatcaaacc tatatcaacc caaaatgtac gagaaacaaa CD 3551 ctcccgtcca ttacaattta atcgcgacaa aatttctgag tcctgaaata CD 3601 agaaataatc atgtaaatga tttaacaatg tgttttgata cggagactgg CD 3651 caaaactgat gaagagtttt ttgatgaaaa ggttgcgagg tctatagaga CD 3701 attggggatt tttgaataaa tcttgcaaat tggatgaaat taattggaat CD 3751 gaatggttat attctctctc cagatataac ttaccattaa cagcctggcg CD 3801 caatatagca cctcggaagt ggaaagtttg cttgagtgaa cttagtagta CD 3851 ttgagacaaa tacgataact gaattgaaag atcaggtatc tcaaaacaag CD 3901 ctacacagtt attattccat atacacaaaa aaatctttcc tcaggaataa CD 3951 aattagtaat tttagtaaac tgcgtaaaca tagaaacctg ctacaaaacc CD 4001 taactgattc cgtacaaaat ggcgatgtgg aaaatttatc tgtgcaacga CD 4051 gatattatgg agcaaaggtt tcattgcaag agttgcattc aaaaaagtag CD 4101 tagaggagga agaaacagaa ttagcaaatt tgttcacttt ctgagttcta CD 4151 atgtggagag caaaaataat ttgaatttgc aaattgattt gctatcgtgg CD 4201 ttagatccag atattgcaaa aacaaaaata tttttaaaaa aaaagaaaaa CD 4251 ggcaaagcag ttaaaaaatc ctctattgag aaatcactac cgatacagat CD 4301 atgtattaga catatccggc agattccaaa aggtattgaa tcagttgaat CD 4351 gatctcacgt tagatgaaag agaagatgcg gactacattt ttcgatggaa CD 4401 atttaaattt gaaacagaat tggaaaaatt tagaaactta atttctctca CD 4451 cgagaatgct aggagatgac caagatttga ttacactttg tacaaatatt CD 4501 gaagtaaatt cagatttgct aaatttgcaa tttaatgcaa aaactaaacg CD 4551 tgatatgttt cataacttat ctgttgtttc agcccatcgt ttgcggctag CD 4601 tatttgacga tcaagatttg ttgtataaaa taatcaaccc tttgctaaaa CD 4651 ttcaaaggga gattaagagg tatatttagg agacgtttat acagaaatgt CD 4701 atataacggt agttatattt ccaatttgtc acatatatta actgaacgaa CD 4751 attgtaaaca gtcttgcctc tataacatcg atgacctttt atctccgcga CD 4801 cgtaggcggg aatttcgatt tctctattgt ctattgagcc caaaaataga CD 4851 atattcccaa tatatatcaa gaattaaaaa aatagacaat gctgagaaaa CD 4901 aacaaaccct ttaccatctc ccaagaccga tcaggattca aaagattaaa CD 4951 cgttttttat ggcccagtca ccgattagaa gaagcggcct gtacaggcag CD 5001 atcctgcgtt ggcgttatga ctggaagtcg atttgtaacg cttagaatcc CD 5051 gaatgtatcc tattcctcta aattaa FT EDITED CDNA CD 1 aTgaatacaa agatattgtt gtcactgccc tggccaaaac tgatggatcc CD 51 ctatatgcta cttggtttct actatgggtt acttacaaca ttacccgtgg CD 101 gaccttcgca aatcctatgt gtgagatctt ttcttttggg tgggaatcta CD 151 agtgggctaa tttctatcag tgggtcggta ttggcacaac taataactgc CD 201 atcatcaatc tactgctcgc caatttatct attactgcta aggccacatt CD 251 tactaactat tgtggcaata ccgtatacac ttctcttttg tctggtaatc CD 301 aaggattttc caaattatca gattttgcgt cccgtgacat cattacgtga CD 351 ctcacgagta gctagattat ttttgataag tttctttttt caaatattga CD 401 acccaataat gttaccaaat agtgtgttaa caagactgat ttatctatac CD 451 ttcttcaggt atagcaccaa tacagttttt atggtatcta cttttatggg CD 501 ttggttaact ggtcaggcag cattcaattt tttttctaga ctacttttaa CD 551 gtcgggtgaa aggggattcc ccgatattat atctagtggc gaaacgtttt CD 601 atatatgcaa cttttagtat tgtttccatc tcatatgctg tggcatattt CD 651 gggtagagct ccggtctctt tttggaccaa aaagttcatg aatgaatctc CD 701 atgatagaga aatgaatctt tgggaaattg ctgaatattc ggatctattg CD 751 tggtggtttt ttaaaccgtg gcccacttct ttttttgatc cctctagggc CD 801 aaatcggagt aatcgatttg tcaaaaatcg tcgattccac atgaataata CD 851 ctttttataa ggggagaaca tccacatact tttttgaaaa atgtttaact CD 901 gatggtaaag agagattatc ttttctagca ttgcccagtt tgtcaatttt CD 951 tgggaaagaa atgtatcaat cgatggcaaa gtcccgtaga tcttttggaa CD 1001 tccgtttatc atatcaaaat tgggtttcaa aaaaattagc gaaaacaaaa CD 1051 ttctttgaga aagaattaac ggatcaaatc aagttgttag acactggttc CD 1101 ttcattctca aagacgatga gtagaaaaac aagattgatg ggcggtaaaa CD 1151 ggaggagaat accccgcacc tatgacccct ttgtcaataa cttccgcata CD 1201 agaattccag tttcacagac atttttgtta gaagatgact tgggtttgag CD 1251 tctatgggaa tgggataaat tggcgacgga aagaaaaaat agaaaggcaa CD 1301 aaaaaactgt caggataaat gctatcaagg ataagatttt cacaaaagat CD 1351 cggagatgga aacatggata tggaaatccg ctaccgtggg aacctttgcc CD 1401 gtcgagaagt aaacgcatgt tctattttat atttgaaaat cgagctttat CD 1451 acgactacga tctacaaaat atcttgaaaa agataaaatc ttcgcccaca CD 1501 ctcgatgtta cttggaaaga aataatggat ttagattatg aagaccatat CD 1551 cttatttttg acctacttag aggtgggatg ctgtcaccga tttggttgga CD 1601 tatctccact caaagccttt ttgagaaaaa gttctaagag tttgtcaaat CD 1651 gtagaacgga gaatacgcag actaaataaa attgggaatt tgagtatgga CD 1701 tctggctcga tatactatcc tgtattttga aaataatttt gatataccgg CD 1751 gaggagacgg cgattttcgc tacagaaaat tgcgtaatgt gggtatcact CD 1801 ttcgcaaaag gaaagcccag atcagaaaga ttaatgaagc gatatgcaaa CD 1851 agtatctgat ttccgtagaa aatttctgaa gggctctatg cgttctagga CD 1901 ggcgaaagac cttgctctgg aaagcacttc aagaaaaaat acgttcgtct CD 1951 tttttcctca gatcagcaga aaggacaatc ttgtttcaat cacttattga CD 2001 gcgactgaca acttcaagcc gtgaagaaaa atttagtgag ttggaaaaag CD 2051 acacggatta cgaatttcag aaacaactac tagatatctc tttatcagcg CD 2101 aaaaggagtt taatcggtga atcgaagctt actcgttcag ctatagcagc CD 2151 tagatcagac ataggtccta tccataatgg aaggggatat atgctagttt CD 2201 ttcaatccag atttcgaaag tttattaaac taccagtact tatagtcttg CD 2251 aaaaatatcg gacgtatttt actccgtcaa aattccgaat ggaataagga CD 2301 ctggacggga tggaagaaag aaattcatat caattgtacg tttgatggcg CD 2351 aagacttttc acaagatgag ttacctccac gatggttaag agaaggtatt CD 2401 cagataaaaa ttgtgtatcc gtttcaactg aagccttggc acacagatgg CD 2451 gaatgaaaaa caacatactc ttcaaagaaa acacaaagaa attggatcta CD 2501 aaagccggga attgaaaagc aaaaggaaat tgaagcaaaa gaagcacaaa CD 2551 tttacttatt taactgtttt agggtatcag acggatatac cttttggaac CD 2601 tattcaaaag aaaacttctt tttggaaacc tgttcggaga aagttaattc CD 2651 ggatttgtaa aagaagcttg cctcgtcaaa ttaaacaagc ctatcaattt CD 2701 attcactcta ggttcgagaa agtatcaaaa ttgaattcaa ctccatcgaa CD 2751 gaaattgaat cttatttcca atctaagaca aggtggaaaa ttactaagtg CD 2801 actatagtct ggatgagaaa agttggatga aaacctcatc taccaattac CD 2851 gtaaatgaaa agacaaaacc taactgtaat gtaatttcaa acagtgagag CD 2901 atttattgct attggtgggg aaatgagtcc ggctaatgtt actcgtaaac CD 2951 aacttgttac tcgggaccag gtagaaagag aatttttaat gagtatcgtt CD 3001 gcagttgact ccaaaaacct tttggacgaa aaaatagatg acccatattc CD 3051 caaaataact tcgaaggatt tggaaacagg cgatactaca tcaggtgaca CD 3101 taaatcttgt gaattccacc aaatttgaac ggaagcaatt ggtcgattcc CD 3151 gaggaagcag gattaagttt atatttactt gtcagagaat taattgaaac CD 3201 atttgtttca gtactaataa acttgccttt cacaattaac aggatttttg CD 3251 ttcattactt cactgaattc ctcgcgttgt atacaaaatt ggcagggata CD 3301 ttggataaca ttaatgaggg aagcaattta tcaacaagaa gtaaatcgtt CD 3351 gcaatttgac ttgccatctc aaacctgtat ttatattgat atgtggaaca CD 3401 tcggtatgag gggcagctta aacctggatc tgttagttaa tgataaaaga CD 3451 agtagcagta attgTggagt aaaaaataga cagagtggca tctatgttga CD 3501 aaccgacggt gtatcaaacc tatatcaacc caaaatgtac gagaaacaaa CD 3551 ctcccgtcca ttacaattta atcgcgacaa aatttctgag tcctgaaata CD 3601 agaaataatc atgtaaatga tttaacaatg tgttttgata cggagactgg CD 3651 caaaactgat gaagagtttt ttgatgaaaa ggttgcgagg tctatagaga CD 3701 attggggatt tttgaataaa tcttgcaaat tggatgaaat taattggaat CD 3751 gaatggttat attctctctc cagatataac ttaccattaa cagcctggcg CD 3801 caatatagca cctcggaagt ggaaagtttg cttgagtgaa cttagtagta CD 3851 ttgagacaaa tacgataact gaattgaaag atcaggtatc tcaaaacaag CD 3901 ctacacagtt attattccat atacacaaaa aaatctttcc tcaggaataa CD 3951 aattagtaat tttagtaaac tgcgtaaaca tagaaacctg ctacaaaacc CD 4001 taactgattc cgtacaaaat ggcgatgtgg aaaatttatc tgtgcaacga CD 4051 gatattatgg agcaaaggtt tcattgcaag agttgcattc aaaaaagtag CD 4101 tagaggagga agaaacagaa ttagcaaatt tgttcacttt ctgagttcta CD 4151 atgtggagag caaaaataat ttgaatttgc aaattgattt gctatcgtgg CD 4201 ttagatccag atattgcaaa aacaaaaata tttttaaaaa aaaagaaaaa CD 4251 ggcaaagcag ttaaaaaatc ctctattgag aaatcactac cgatacagat CD 4301 atgtattaga catatccggc agattccaaa aggtattgaa tcagttgaat CD 4351 gatctcacgt tagatgaaag agaagatgcg gactacattt ttcgatggaa CD 4401 atttaaattt gaaacagaat tggaaaaatt tagaaactta atttctctca CD 4451 cgagaatgct aggagatgac caagatttga ttacactttg tacaaatatt CD 4501 gaagtaaatt cagatttgct aaatttgcaa tttaatgcaa aaactaaacg CD 4551 tgatatgttt cataacttat ctgttgtttc agcccatcgt ttgcggctag CD 4601 tatttgacga tcaagatttg ttgtataaaa taatcaaccc tttgctaaaa CD 4651 ttcaaaggga gattaagagg tatatttagg agacgtttat acagaaatgt CD 4701 atataacggt agttatattt ccaatttgtc acatatatta actgaacgaa CD 4751 attgtaaaca gtcttgcctc tataacatcg atgacctttt atctccgcga CD 4801 cgtaggcggg aatttcgatt tctctattgt ctattgagcc caaaaataga CD 4851 atattcccaa tatatatcaa gaattaaaaa aatagacaat gctgagaaaa CD 4901 aacaaaccct ttaccatctc ccaagaccga tcaggattca aaagattaaa CD 4951 cgttttttat ggcccagtca ccgattagaa gaagcggcct gtacaggcag CD 5001 atcctgcgtt ggcgttatga ctggaagtcg atttgtaacg cttagaatcc CD 5051 gaatgtatcc tattcctcta aattaa SQ SEQUENCE 1692 AA; MNTKILLSLP WPKLMDPYML LGFYYGLLTT LPVGPSQILC VRSFLLGGNL SGLISISGSV LAQLITASSI YCSPIYLLLL RPHLLTIVAI PYTLLFCLVI KDFPNYQILR PVTSLRDSRV ARLFLISFFF QILNPIMLPN SVLTRLIYLY FFRYSTNTVF MVSTFMGWLT GQAAFNFFSR LLLSRVKGDS PILYLVAKRF IYATFSIVSI SYAVAYLGRA PVSFWTKKFM NESHDREMNL WEIAEYSDLL WWFFKPWPTS FFDPSRANRS NRFVKNRRFH MNNTFYKGRT STYFFEKCLT DGKERLSFLA LPSLSIFGKE MYQSMAKSRR SFGIRLSYQN WVSKKLAKTK FFEKELTDQI KLLDTGSSFS KTMSRKTRLM GGKRRRIPRT YDPFVNNFRI RIPVSQTFLL EDDLGLSLWE WDKLATERKN RKAKKTVRIN AIKDKIFTKD RRWKHGYGNP LPWEPLPSRS KRMFYFIFEN RALYDYDLQN ILKKIKSSPT LDVTWKEIMD LDYEDHILFL TYLEVGCCHR FGWISPLKAF LRKSSKSLSN VERRIRRLNK IGNLSMDLAR YTILYFENNF DIPGGDGDFR YRKLRNVGIT FAKGKPRSER LMKRYAKVSD FRRKFLKGSM RSRRRKTLLW KALQEKIRSS FFLRSAERTI LFQSLIERLT TSSREEKFSE LEKDTDYEFQ KQLLDISLSA KRSLIGESKL TRSAIAARSD IGPIHNGRGY MLVFQSRFRK FIKLPVLIVL KNIGRILLRQ NSEWNKDWTG WKKEIHINCT FDGEDFSQDE LPPRWLREGI QIKIVYPFQL KPWHTDGNEK QHTLQRKHKE IGSKSRELKS KRKLKQKKHK FTYLTVLGYQ TDIPFGTIQK KTSFWKPVRR KLIRICKRSL PRQIKQAYQF IHSRFEKVSK LNSTPSKKLN LISNLRQGGK LLSDYSLDEK SWMKTSSTNY VNEKTKPNCN VISNSERFIA IGGEMSPANV TRKQLVTRDQ VEREFLMSIV AVDSKNLLDE KIDDPYSKIT SKDLETGDTT SGDINLVNST KFERKQLVDS EEAGLSLYLL VRELIETFVS VLINLPFTIN RIFVHYFTEF LALYTKLAGI LDNINEGSNL STRSKSLQFD LPSQTCIYID MWNIGMRGSL NLDLLVNDKR SSSNCGVKNR QSGIYVETDG VSNLYQPKMY EKQTPVHYNL IATKFLSPEI RNNHVNDLTM CFDTETGKTD EEFFDEKVAR SIENWGFLNK SCKLDEINWN EWLYSLSRYN LPLTAWRNIA PRKWKVCLSE LSSIETNTIT ELKDQVSQNK LHSYYSIYTK KSFLRNKISN FSKLRKHRNL LQNLTDSVQN GDVENLSVQR DIMEQRFHCK SCIQKSSRGG RNRISKFVHF LSSNVESKNN LNLQIDLLSW LDPDIAKTKI FLKKKKKAKQ LKNPLLRNHY RYRYVLDISG RFQKVLNQLN DLTLDEREDA DYIFRWKFKF ETELEKFRNL ISLTRMLGDD QDLITLCTNI EVNSDLLNLQ FNAKTKRDMF HNLSVVSAHR LRLVFDDQDL LYKIINPLLK FKGRLRGIFR RRLYRNVYNG SYISNLSHIL TERNCKQSCL YNIDDLLSPR RRREFRFLYC LLSPKIEYSQ YISRIKKIDN AEKKQTLYHL PRPIRIQKIK RFLWPSHRLE EAACTGRSCV GVMTGSRFVT LRIRMYPIPL N* // ID AY178864_83 STANDARD; PRT; 461 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : chlN FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29450.2 FT PROTEIN_NAME : protochlorophyllide reductase subunit chlN FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 124805 - 126187 FT DIRECTIONS : negative FT EDITING : 45 R(Cgt) -> C(Tgt) FT EDITING : 148 A(gCg) -> V(gTg) FT EDITING : 320 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1383 NT; CD 1 atgaaaactc cggagactct tgctttcgaa tgtgaaaccg gcaattacca CD 51 tacgttctgc ccaattagtt gtgtagcttg gttgtaccaa aaaattgaag CD 101 atagtttttt cctggtagtg ggtacaaaaa ctCgtggtta ttttttgcaa CD 151 aatgctcttg gagtgatgat ttttgccgaa cctcgatatg caatggcaga CD 201 attggaagag ggcgatatct cagctcagtt aaatgatcag aaagagttgg CD 251 aaaagatttg cttacaaata agagacgata ggaatcccag tgttatcatt CD 301 tggattggca cttgtactac agagataata aaaatggatt tggaaggtat CD 351 agcgccaaaa ttggaaaaac aaattggaat acctataata gttgcacgag CD 401 caaatggatt ggattacgcc ttcactcagg gggaagatac cgCgttggct CD 451 gccatggcgc atcgctgtcc ggaatacaaa cattgcacaa cgaacttgaa CD 501 gaaccggact gatgaaatgg cgcgtattga taatcatact actaacaaat CD 551 ctccctttga agcgagtaaa ttgacaagat tcaatttagt gctttttggt CD 601 tctttatcct ccagtatagc ttcgcaactg aatttagaat tgaaacgcca CD 651 atcaatttct gtttcaggtt ggttaccttc gcagaaatac gaggaactcc CD 701 ccggcttagg agagggtatc tatgtttgcg gagtgaatcc ttttctgagt CD 751 cgtacagcaa caacattaat gcgtcgccgg aaatgtaagt tagttggagc CD 801 acctttccca attggtccgg atggcacacg cgcctggatc gaaaaaattt CD 851 gttcagtttt tgatattaag tcatacggtc tagaaaatag ggaaagtgaa CD 901 atatgggaaa atgtcaaaga ttatatccag gtaataaatg gtaaatccgt CD 951 attctttaCg ggagataatt tattggaaat ttctttggca agatttttaa CD 1001 ttcgatgcgg aatgattgtt tacgaagtag gaattcccta tatggataga CD 1051 cgataccaag ctgctgagct tttgttttta caacatactt gccggaagat CD 1101 gaaaacaccc ctaccccgga ttgttgaaaa acccgacaat tatggacaga CD 1151 tacaacgtat gcatgagctt aaaccacatt tggctattac gggaatggct CD 1201 catgctaatc ctttggaggc tagaaatata gataccaaat ggtcagttga CD 1251 attcacattt gcacaaattc acggattcag tagcgttcga gacatcctcg CD 1301 aactagttac tcgtccgctg cgacgtaggg gtgttataac cccaggtttt CD 1351 cgcagcttat caaaacaaac gacaggagat tga FT EDITED CDNA CD 1 atgaaaactc cggagactct tgctttcgaa tgtgaaaccg gcaattacca CD 51 tacgttctgc ccaattagtt gtgtagcttg gttgtaccaa aaaattgaag CD 101 atagtttttt cctggtagtg ggtacaaaaa ctTgtggtta ttttttgcaa CD 151 aatgctcttg gagtgatgat ttttgccgaa cctcgatatg caatggcaga CD 201 attggaagag ggcgatatct cagctcagtt aaatgatcag aaagagttgg CD 251 aaaagatttg cttacaaata agagacgata ggaatcccag tgttatcatt CD 301 tggattggca cttgtactac agagataata aaaatggatt tggaaggtat CD 351 agcgccaaaa ttggaaaaac aaattggaat acctataata gttgcacgag CD 401 caaatggatt ggattacgcc ttcactcagg gggaagatac cgTgttggct CD 451 gccatggcgc atcgctgtcc ggaatacaaa cattgcacaa cgaacttgaa CD 501 gaaccggact gatgaaatgg cgcgtattga taatcatact actaacaaat CD 551 ctccctttga agcgagtaaa ttgacaagat tcaatttagt gctttttggt CD 601 tctttatcct ccagtatagc ttcgcaactg aatttagaat tgaaacgcca CD 651 atcaatttct gtttcaggtt ggttaccttc gcagaaatac gaggaactcc CD 701 ccggcttagg agagggtatc tatgtttgcg gagtgaatcc ttttctgagt CD 751 cgtacagcaa caacattaat gcgtcgccgg aaatgtaagt tagttggagc CD 801 acctttccca attggtccgg atggcacacg cgcctggatc gaaaaaattt CD 851 gttcagtttt tgatattaag tcatacggtc tagaaaatag ggaaagtgaa CD 901 atatgggaaa atgtcaaaga ttatatccag gtaataaatg gtaaatccgt CD 951 attctttaTg ggagataatt tattggaaat ttctttggca agatttttaa CD 1001 ttcgatgcgg aatgattgtt tacgaagtag gaattcccta tatggataga CD 1051 cgataccaag ctgctgagct tttgttttta caacatactt gccggaagat CD 1101 gaaaacaccc ctaccccgga ttgttgaaaa acccgacaat tatggacaga CD 1151 tacaacgtat gcatgagctt aaaccacatt tggctattac gggaatggct CD 1201 catgctaatc ctttggaggc tagaaatata gataccaaat ggtcagttga CD 1251 attcacattt gcacaaattc acggattcag tagcgttcga gacatcctcg CD 1301 aactagttac tcgtccgctg cgacgtaggg gtgttataac cccaggtttt CD 1351 cgcagcttat caaaacaaac gacaggagat tga SQ SEQUENCE 461 AA; MKTPETLAFE CETGNYHTFC PISCVAWLYQ KIEDSFFLVV GTKTCGYFLQ NALGVMIFAE PRYAMAELEE GDISAQLNDQ KELEKICLQI RDDRNPSVII WIGTCTTEII KMDLEGIAPK LEKQIGIPII VARANGLDYA FTQGEDTVLA AMAHRCPEYK HCTTNLKNRT DEMARIDNHT TNKSPFEASK LTRFNLVLFG SLSSSIASQL NLELKRQSIS VSGWLPSQKY EELPGLGEGI YVCGVNPFLS RTATTLMRRR KCKLVGAPFP IGPDGTRAWI EKICSVFDIK SYGLENRESE IWENVKDYIQ VINGKSVFFM GDNLLEISLA RFLIRCGMIV YEVGIPYMDR RYQAAELLFL QHTCRKMKTP LPRIVEKPDN YGQIQRMHEL KPHLAITGMA HANPLEARNI DTKWSVEFTF AQIHGFSSVR DILELVTRPL RRRGVITPGF RSLSKQTTGD * // ID AY178864_84 STANDARD; PRT; 294 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : chlL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29451.2 FT PROTEIN_NAME : photochlorophyllide reductase subunit chlL FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 126266 - 127147 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 83 R(Cgt) -> C(Tgt) FT EDITING : 106 P(cCt) -> L(cTt) FT EDITING : 120 S(tCa) -> L(tTa) FT EDITING : 128 A(gCt) -> V(gTt) FT EDITING : 233 R(Cgt) -> C(Tgt) FT EDITING : 236 H(Cat) -> Y(Tat) FT EDITING : 242 *(Taa) -> Q(Caa) FT EDITING : 294 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 882 NT; CD 1 aCgaaagtag cagtttatgg aaaaggtgga attggaaaat caacaactag CD 51 ctgtaatata tcgatagctt tagccagaag aggaagaaaa gtcttacaaa CD 101 ttggatgtga cccaaaacat gatagtacat ttacactaac aggattttta CD 151 atacctacaa ttatagatac tttacaggtg aaagattacc actatgaaga CD 201 tgtatggccc gaagatgtga tttatagagg ttacggcggg gtagatCgtg CD 251 tagaagctgg aggaccccct gcaggagcag gatgcggcgg gtacgttgtg CD 301 ggagaaacgg taaaacCttt gaaagaatta aatgcttttt acgaatatga CD 351 catcatttCa ttcgatgttc tgggagatgt tgCttgcggg ggatttgccg CD 401 ctcccttaaa ttatgcggat tattgcatta ttataactga taatggcttc CD 451 gacgctctat ttgcggcaaa ccgtattgcc gcttcagtta gagaaaaatc CD 501 acatacccat cccttgcgac tagcgggtct agttggaaac cgaacatccg CD 551 gaagagatct tattgataaa tatgtagaag cttgccccat gcctgtacta CD 601 gaggtattgc ccttagtaga agatattcgc gtatcgagag tgaaaggaaa CD 651 aaccttgttt gaaatggctg aatatcaacc gaatttaaat tatgttCgtg CD 701 attttCattt gaatatagca gatTaaatct tatccgagcc agagggagtc CD 751 gtgccaaggg aaattccaga tagagaattg tttagcttgc tctctgattt CD 801 ttatttaaat tccaccttta caaatgaaag tgatggtgga tatgaccacc CD 851 aagatgttcc gcttgacttt acaattattC ga FT EDITED CDNA CD 1 aTgaaagtag cagtttatgg aaaaggtgga attggaaaat caacaactag CD 51 ctgtaatata tcgatagctt tagccagaag aggaagaaaa gtcttacaaa CD 101 ttggatgtga cccaaaacat gatagtacat ttacactaac aggattttta CD 151 atacctacaa ttatagatac tttacaggtg aaagattacc actatgaaga CD 201 tgtatggccc gaagatgtga tttatagagg ttacggcggg gtagatTgtg CD 251 tagaagctgg aggaccccct gcaggagcag gatgcggcgg gtacgttgtg CD 301 ggagaaacgg taaaacTttt gaaagaatta aatgcttttt acgaatatga CD 351 catcatttTa ttcgatgttc tgggagatgt tgTttgcggg ggatttgccg CD 401 ctcccttaaa ttatgcggat tattgcatta ttataactga taatggcttc CD 451 gacgctctat ttgcggcaaa ccgtattgcc gcttcagtta gagaaaaatc CD 501 acatacccat cccttgcgac tagcgggtct agttggaaac cgaacatccg CD 551 gaagagatct tattgataaa tatgtagaag cttgccccat gcctgtacta CD 601 gaggtattgc ccttagtaga agatattcgc gtatcgagag tgaaaggaaa CD 651 aaccttgttt gaaatggctg aatatcaacc gaatttaaat tatgttTgtg CD 701 attttTattt gaatatagca gatCaaatct tatccgagcc agagggagtc CD 751 gtgccaaggg aaattccaga tagagaattg tttagcttgc tctctgattt CD 801 ttatttaaat tccaccttta caaatgaaag tgatggtgga tatgaccacc CD 851 aagatgttcc gcttgacttt acaattattT ga SQ SEQUENCE 294 AA; MKVAVYGKGG IGKSTTSCNI SIALARRGRK VLQIGCDPKH DSTFTLTGFL IPTIIDTLQV KDYHYEDVWP EDVIYRGYGG VDCVEAGGPP AGAGCGGYVV GETVKLLKEL NAFYEYDIIL FDVLGDVVCG GFAAPLNYAD YCIIITDNGF DALFAANRIA ASVREKSHTH PLRLAGLVGN RTSGRDLIDK YVEACPMPVL EVLPLVEDIR VSRVKGKTLF EMAEYQPNLN YVCDFYLNIA DQILSEPEGV VPREIPDREL FSLLSDFYLN STFTNESDGG YDHQDVPLDF TII* // ID AY178864_85 STANDARD; PRT; 2105 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ycf2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29454.2 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 128339 - 134653 FT DIRECTIONS : negative FT EDITING : 63 *(Tga) -> R(Cga) FT EDITING : 65 L(Cta) -> L(Tta) FT EDITING : 1199 S(tCc) -> F(tTc) FT EDITING : 1232 *(Taa) -> Q(Caa) FT EDITING : 1251 S(agT) -> S(agC) FT EDITING : 1523 S(tCa) -> L(tTa) FT EDITING : 1531 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 6315 NT; CD 1 atggtaaaaa aggtgataga aaaaggaaga ggagtaaggg gccgagatta CD 51 ttcatctaaa gtttgggact tcttagaaat cgatgcatta aactacttct CD 101 ccgaatcatt gaaaaaccac tatctcgaag aacttgtagt tagtccagct CD 151 tccactgctg aacctttcat cagattatct gacttgTgat ttCtaagttt CD 201 actgtttcta cgtaatctgc gtcattcaat aatgaggggt agtggcgtca CD 251 ccctggaaat gctgatgttg ctggcgatac caatttttat gcattgcctg CD 301 agttacaaaa attcgattga taggggtttt gtattagcaa aagtcattga CD 351 tggaggtgag gggataagaa agaaacagac ggaaaattat ggcaatttct CD 401 cctacgattg cttcctccaa ttcaagagat ttttatccgt cggaagagat CD 451 gggaagagag aaatactgga gccctactac ttaggtttga acaaagatat CD 501 ttcaatttct gcaagttctt caaaggagga aagagaaatc cgttatgatg CD 551 tcacgactcc cttgccttcc ggtaggtgga aggcacgcat aatgaggagg CD 601 gattccctac tatttggcgg ggatagattc aaggggaaaa ctgaagggat CD 651 tcaagtggtt cgtgggggta ggtatctgca agatttagtt aggtttttca CD 701 aattctataa aaacttggta gtttccaaaa acggaagtga ctgccaccaa CD 751 aacaattttg attcgttgct tctccgggaa atctgtgaca agcaagatct CD 801 gggtcggtta caagcaatac ggttgggaaa caattcatta agttccgtag CD 851 tattgtaccc ctttgaatct gaatccgcag attcagccga tccccggagg CD 901 gacggatcgg catttccctc tgagcaagaa gtcttttcca acttgtattc CD 951 gtttacgtct cgtgagaaaa caatattgtt tcgcaactct atatctggat CD 1001 tagattatgg agaagatgag ggaggctttc ccgttctaca tgcttattca CD 1051 caagttagaa atcaattaat aaaccgactc accaacttcc tttcgataat CD 1101 taggaaatca aaccttcctc ttggtgggaa aatagttatt gacgtcagta CD 1151 ataggatcaa atccgagaga gtcttttttc catcgggaat gaaaaaaaat CD 1201 atgccgttta ccaaaatatc tggcaagaaa cttaggttag caagtggcgg CD 1251 atacttcgac ttcgttgaga ttttcccaac ctattttaaa gcatccttag CD 1301 agatacctag ggaaacaact aatcaaaatg gaaatactaa ttttttagac CD 1351 gaattggaag gaggggggaa cctagattca atttattctc tagttagatt CD 1401 atatgggcga aatagaatca tacctctcta ctcaacatac atatttcttc CD 1451 tccacgatta tttttgtgcg ttatccactg aatatttctt ccgaatcaaa CD 1501 tattggttgg atggctggac gggtggcaga gtatacatca gtttcacggg CD 1551 aattgcaact gaagaaacag tattcaagtg gaaggatgac gtagagcgtc CD 1601 tatcgaacga atatgttacc tcccatattg gtcagtgtag gaatgttcaa CD 1651 tcaaatctgt atagacggct cgatgcaaca cggaatttgt atgtttcgcc CD 1701 tgttaagaaa ttcttgggag aagcaatgaa gtacaacttg gcagaattaa CD 1751 tctgccgtgt gtcactagtg ggaaacgagt tgctaaataa gactggtgtc CD 1801 agtctccgta gtaccaatag acataccaag aaatattttc accgatttct CD 1851 cgatgtgtta tttctttcca aaatgattgt tgctgaggct actcgccaga CD 1901 aaattctgat agataccgtt gattactgca tcgaaaaatt ggacgacata CD 1951 gattttgaaa aattgaacaa aatggatcgt attgagcttg attttttctc CD 2001 aagtttatcc gatggttaca ttgacgaaga gatacttctt ttcaaaacaa CD 2051 ttcttgaaga aagaaaaagt ttcttagtcg agtctagact gttaacaagt CD 2101 gaaaaatcgg taggctcctc gactgcgcta aaacctgcgt cgaatttcac CD 2151 ctctctcggg ttgtcttgca tcgaagctat ccgagcagga ttctcgggtg CD 2201 aggctctttc tattatgggg agacaaaatt ggaatctgtt tgtgtgtgat CD 2251 ttaagccgtg gggggaattc aattaggaat attggtgaga gtcttccaaa CD 2301 aaacatttcc gatcaaatgg atgaaataaa caactcacct atacggagcc CD 2351 gggctggaaa caactttatc cagagaatca aaaggggttt cttcgtcggg CD 2401 aactgtagca atagttatct cgacgtgtta gaaaactttt atttgagctc CD 2451 cgacgagaaa gccatctcct catctgatat cctttcactt attcacctcc CD 2501 aattgtcaga ttcgttatca tccaattttt cgaaacaaac ggcaggggag CD 2551 gtagctgatc acttactcac accaattcaa cttatttcgc ctaacctgca CD 2601 tgaatccgcg accatagtaa ctcatttgga tggacttccc aattctattt CD 2651 cggatctgaa tgggttactg gcaagtttga gctcatcccc ccgtgaagcg CD 2701 acagactcgt tcctattttc gtgtagtaat gatggagttt ctttggagga CD 2751 ggcgtcgaga aactccgact cgtggtcgga tcatcagcga acccaacctc CD 2801 gtcggaatct gctggtatta gatcgagtca attcggagaa gtttttcaaa CD 2851 gatggattag actcgagaaa tggttccccc acgagtcaag tctatcgaaa CD 2901 cgggttgtct attgagtatt tttgggaacc gaaaaaattg gatacacctt CD 2951 attggtcgct aagattctca ttattcaatg gcgtaacatc aagatttata CD 3001 gcgggatcaa ttggggagga tgttacccgc caagatgcgg ggttcgcaga CD 3051 ttcatctgcc cgggaagaag ctacttgccc gtcccatttc atcaatttca CD 3101 atgaattatc agaagatttg aacagatata agatctcttg gattttctgg CD 3151 agagacagta tcggcgaaaa ttggagctta ttgggagatt atatacccct CD 3201 gttttttacc cccacctggt ggagatactt ctgcgatcta attacaaaag CD 3251 catatccgga aatagtactt aagataagtt acgactcaaa tcatgatctt CD 3301 cgtagaattt ctgaaggaat tgctaggggt ttagtaggta gcgcgaaggg CD 3351 ctatttactc cgaagcctgc aaaggctagg attgatattc ggaaacaatt CD 3401 ctattaatac tatatcatcc gagacagatc ttctcattct cgaaaaaatc CD 3451 cctgataaag cggagatttt acatccgggg gaatggtcgg tatctcaatt CD 3501 ttccaatagg cctatctcct attgctgcat cctctcaata ttacttgttc CD 3551 tcctgtcatt gaaacatcct ttgtctgccg tttcgggttc caattCcttt CD 3601 catttgtgga aacgttttgc tactattgac tatttaacag acccaatgcg CD 3651 tggatcctat ttgagaaagg taatgtattc ccccccgaca agcTaaatgt CD 3701 taacaagaga tctactaatt cattctctca atagattctt gaattgtgta CD 3751 agTaatatac tttttttcct tttcgtgaaa aatgaaattg attcgtggat CD 3801 atttcgtaga gaaagctctg atattttaga tagtaataaa gaactactga CD 3851 ctcaacattt ggtaacgact aagattctct acaggtatgc atcgaaatca CD 3901 aaattcaatt atgatttatc gagcaacaag atttttcatg aaccttaccc CD 3951 gcaagataga tccaacgttt tggcatactt acttcaattc tggcaaaatg CD 4001 atctattggg tcacaagatt cgtaagttgg atcctgcgga gaagtgggct CD 4051 ttttccgccc ttgggagaga tattctattt tcggcaacaa caaggcgaag CD 4101 agacagtcta ctaaatatgc catgtcgtga catacctatt tcactccaat CD 4151 cgggattatt accatccaaa ggaattttgc tagtaggacc tgtagaaact CD 4201 ggcagatcct ctcttattag agatgtagca tccaactcct actttccagt CD 4251 ggtgaaacta ccactcaaaa aattcatata caaccgatct tttttcaata CD 4301 atgtacgtgg aaatttcatc tcgaaagaga gcgtacaccg attaaatatc CD 4351 gtctttgaaa tagcgaaaga aatgtctcct tgtacattat ggattcaaga CD 4401 tattcatgaa ttgaatattt gtcgttcgta taataagcta gaagctgatc CD 4451 ccaaatttct actttgccaa atattgaaga gtattggtca caagctcggc CD 4501 aactccgaca tccgcgagaa tgtcgttatt gccacgactc acgtacctgc CD 4551 gaggatagat ccagcttCag tagctccgaa tcggttaaac Taattaataa CD 4601 attttcggag gtccaatggg cgtcaacgtc agaaagaatt gtcaattcta CD 4651 ttacgtatca aaggtttcga ggtaggggct aatccgactc ttcttgagag CD 4701 tactgtgtct ggaactgcag gttatagtaa acgagattta cttcttctcg CD 4751 ctaatgaagc gttattgata ggtacttcca aagggagaaa gtttgtatgt CD 4801 agcaacacaa ttggattagc tttgcatagg caacattcga ctgttagtga CD 4851 tatgggcaat gagatggaat ctaattctga atgggaaatc tcttcctaca CD 4901 agatggcaga agtaaagaat agtttgacag atatttctct cacaactttt CD 4951 ccatttattg gtcgtgacga gttaaaaatg cgattttatt acttgtctaa CD 5001 ctggtatgtg gaaccttcaa caaccgaatc aacaattgat gaattcacta CD 5051 tgtttttgca tctcccagag ctaatagcca aattagtagc tcgcgattcg CD 5101 ttccaaatgg ataggggaaa agaagataat ttcattgtta tcgacaaact CD 5151 cgtagagaat gacttaaacc tagcttgtgg cgtcctagaa aacctctcga CD 5201 ataatttccc acgtccggaa atttgtaggg gagagagccg gcgcagtaat CD 5251 agttttcctc cccctcttcc tattggaaaa cccaagtatt gctcaggtgt CD 5301 aacctctcta agtcgctctt ccaaatctct gaaaagaggg agaattagta CD 5351 gtctaaccga tttcgagatg caacagtcac ccgaattaag aaactcagcg CD 5401 gcagagatat cgcgtgagat tacttggtcc cgcaaggctt ggcgtctccg CD 5451 tttcctgcga agcgggactt acgaattgat gggggtatta tccgaaccca CD 5501 accatttgta taacttaatt cttctttact acaatcagaa ttacataccc CD 5551 caacaagatt ttgaattcag taagattagg ggaaagagaa gtaagtggcg CD 5601 cgagaaaagc gggtatcttt tcagcttcga gaaatctgtc actaatggaa CD 5651 cagataattc cattaaaaga ttggaaaacc gattggataa tatgttgtta CD 5701 cgtgagcaat ttctcgaatt gggaatctct ggcgattcat ctaatgagta CD 5751 tgaaacacat tgtgatcgat tgaatgaaat gactcgactc ttcggggggc CD 5801 gcttcatctg ggaccccatg cttctgttcc agccagaccc taacattcct CD 5851 tccctgcgcc gcaacttgtt gtcaacgaaa gaactggcac ggaggcttca CD 5901 caccatttac ggtatgagaa ggcagcgcct tcagaagatg tcaaataata CD 5951 aaattaaaga ttttttcctc tatagcgaag agaatccaaa attgaaaccc CD 6001 gactcatctc tcaatcggcg gaataatctt cctctggaag aggaggagcg CD 6051 agattccgaa tacgtcaggg aaacctcttc cgtagatata catctgcaat CD 6101 atccgcagat atttactccc gttcgtttgg gttgctacgc ggtagcggag CD 6151 gatttcccgg aacgatttct tcggtttagg cttctggttc atagaaacaa CD 6201 atggctgaga cggaaccgtt ccccatttcg ggattttctt atttataata CD 6251 tgttgcttga aacttatgaa tatctatcca atccgtttcg gtttggtaaa CD 6301 gcatcactgg attga FT EDITED CDNA CD 1 atggtaaaaa aggtgataga aaaaggaaga ggagtaaggg gccgagatta CD 51 ttcatctaaa gtttgggact tcttagaaat cgatgcatta aactacttct CD 101 ccgaatcatt gaaaaaccac tatctcgaag aacttgtagt tagtccagct CD 151 tccactgctg aacctttcat cagattatct gacttgCgat ttTtaagttt CD 201 actgtttcta cgtaatctgc gtcattcaat aatgaggggt agtggcgtca CD 251 ccctggaaat gctgatgttg ctggcgatac caatttttat gcattgcctg CD 301 agttacaaaa attcgattga taggggtttt gtattagcaa aagtcattga CD 351 tggaggtgag gggataagaa agaaacagac ggaaaattat ggcaatttct CD 401 cctacgattg cttcctccaa ttcaagagat ttttatccgt cggaagagat CD 451 gggaagagag aaatactgga gccctactac ttaggtttga acaaagatat CD 501 ttcaatttct gcaagttctt caaaggagga aagagaaatc cgttatgatg CD 551 tcacgactcc cttgccttcc ggtaggtgga aggcacgcat aatgaggagg CD 601 gattccctac tatttggcgg ggatagattc aaggggaaaa ctgaagggat CD 651 tcaagtggtt cgtgggggta ggtatctgca agatttagtt aggtttttca CD 701 aattctataa aaacttggta gtttccaaaa acggaagtga ctgccaccaa CD 751 aacaattttg attcgttgct tctccgggaa atctgtgaca agcaagatct CD 801 gggtcggtta caagcaatac ggttgggaaa caattcatta agttccgtag CD 851 tattgtaccc ctttgaatct gaatccgcag attcagccga tccccggagg CD 901 gacggatcgg catttccctc tgagcaagaa gtcttttcca acttgtattc CD 951 gtttacgtct cgtgagaaaa caatattgtt tcgcaactct atatctggat CD 1001 tagattatgg agaagatgag ggaggctttc ccgttctaca tgcttattca CD 1051 caagttagaa atcaattaat aaaccgactc accaacttcc tttcgataat CD 1101 taggaaatca aaccttcctc ttggtgggaa aatagttatt gacgtcagta CD 1151 ataggatcaa atccgagaga gtcttttttc catcgggaat gaaaaaaaat CD 1201 atgccgttta ccaaaatatc tggcaagaaa cttaggttag caagtggcgg CD 1251 atacttcgac ttcgttgaga ttttcccaac ctattttaaa gcatccttag CD 1301 agatacctag ggaaacaact aatcaaaatg gaaatactaa ttttttagac CD 1351 gaattggaag gaggggggaa cctagattca atttattctc tagttagatt CD 1401 atatgggcga aatagaatca tacctctcta ctcaacatac atatttcttc CD 1451 tccacgatta tttttgtgcg ttatccactg aatatttctt ccgaatcaaa CD 1501 tattggttgg atggctggac gggtggcaga gtatacatca gtttcacggg CD 1551 aattgcaact gaagaaacag tattcaagtg gaaggatgac gtagagcgtc CD 1601 tatcgaacga atatgttacc tcccatattg gtcagtgtag gaatgttcaa CD 1651 tcaaatctgt atagacggct cgatgcaaca cggaatttgt atgtttcgcc CD 1701 tgttaagaaa ttcttgggag aagcaatgaa gtacaacttg gcagaattaa CD 1751 tctgccgtgt gtcactagtg ggaaacgagt tgctaaataa gactggtgtc CD 1801 agtctccgta gtaccaatag acataccaag aaatattttc accgatttct CD 1851 cgatgtgtta tttctttcca aaatgattgt tgctgaggct actcgccaga CD 1901 aaattctgat agataccgtt gattactgca tcgaaaaatt ggacgacata CD 1951 gattttgaaa aattgaacaa aatggatcgt attgagcttg attttttctc CD 2001 aagtttatcc gatggttaca ttgacgaaga gatacttctt ttcaaaacaa CD 2051 ttcttgaaga aagaaaaagt ttcttagtcg agtctagact gttaacaagt CD 2101 gaaaaatcgg taggctcctc gactgcgcta aaacctgcgt cgaatttcac CD 2151 ctctctcggg ttgtcttgca tcgaagctat ccgagcagga ttctcgggtg CD 2201 aggctctttc tattatgggg agacaaaatt ggaatctgtt tgtgtgtgat CD 2251 ttaagccgtg gggggaattc aattaggaat attggtgaga gtcttccaaa CD 2301 aaacatttcc gatcaaatgg atgaaataaa caactcacct atacggagcc CD 2351 gggctggaaa caactttatc cagagaatca aaaggggttt cttcgtcggg CD 2401 aactgtagca atagttatct cgacgtgtta gaaaactttt atttgagctc CD 2451 cgacgagaaa gccatctcct catctgatat cctttcactt attcacctcc CD 2501 aattgtcaga ttcgttatca tccaattttt cgaaacaaac ggcaggggag CD 2551 gtagctgatc acttactcac accaattcaa cttatttcgc ctaacctgca CD 2601 tgaatccgcg accatagtaa ctcatttgga tggacttccc aattctattt CD 2651 cggatctgaa tgggttactg gcaagtttga gctcatcccc ccgtgaagcg CD 2701 acagactcgt tcctattttc gtgtagtaat gatggagttt ctttggagga CD 2751 ggcgtcgaga aactccgact cgtggtcgga tcatcagcga acccaacctc CD 2801 gtcggaatct gctggtatta gatcgagtca attcggagaa gtttttcaaa CD 2851 gatggattag actcgagaaa tggttccccc acgagtcaag tctatcgaaa CD 2901 cgggttgtct attgagtatt tttgggaacc gaaaaaattg gatacacctt CD 2951 attggtcgct aagattctca ttattcaatg gcgtaacatc aagatttata CD 3001 gcgggatcaa ttggggagga tgttacccgc caagatgcgg ggttcgcaga CD 3051 ttcatctgcc cgggaagaag ctacttgccc gtcccatttc atcaatttca CD 3101 atgaattatc agaagatttg aacagatata agatctcttg gattttctgg CD 3151 agagacagta tcggcgaaaa ttggagctta ttgggagatt atatacccct CD 3201 gttttttacc cccacctggt ggagatactt ctgcgatcta attacaaaag CD 3251 catatccgga aatagtactt aagataagtt acgactcaaa tcatgatctt CD 3301 cgtagaattt ctgaaggaat tgctaggggt ttagtaggta gcgcgaaggg CD 3351 ctatttactc cgaagcctgc aaaggctagg attgatattc ggaaacaatt CD 3401 ctattaatac tatatcatcc gagacagatc ttctcattct cgaaaaaatc CD 3451 cctgataaag cggagatttt acatccgggg gaatggtcgg tatctcaatt CD 3501 ttccaatagg cctatctcct attgctgcat cctctcaata ttacttgttc CD 3551 tcctgtcatt gaaacatcct ttgtctgccg tttcgggttc caattTcttt CD 3601 catttgtgga aacgttttgc tactattgac tatttaacag acccaatgcg CD 3651 tggatcctat ttgagaaagg taatgtattc ccccccgaca agcCaaatgt CD 3701 taacaagaga tctactaatt cattctctca atagattctt gaattgtgta CD 3751 agCaatatac tttttttcct tttcgtgaaa aatgaaattg attcgtggat CD 3801 atttcgtaga gaaagctctg atattttaga tagtaataaa gaactactga CD 3851 ctcaacattt ggtaacgact aagattctct acaggtatgc atcgaaatca CD 3901 aaattcaatt atgatttatc gagcaacaag atttttcatg aaccttaccc CD 3951 gcaagataga tccaacgttt tggcatactt acttcaattc tggcaaaatg CD 4001 atctattggg tcacaagatt cgtaagttgg atcctgcgga gaagtgggct CD 4051 ttttccgccc ttgggagaga tattctattt tcggcaacaa caaggcgaag CD 4101 agacagtcta ctaaatatgc catgtcgtga catacctatt tcactccaat CD 4151 cgggattatt accatccaaa ggaattttgc tagtaggacc tgtagaaact CD 4201 ggcagatcct ctcttattag agatgtagca tccaactcct actttccagt CD 4251 ggtgaaacta ccactcaaaa aattcatata caaccgatct tttttcaata CD 4301 atgtacgtgg aaatttcatc tcgaaagaga gcgtacaccg attaaatatc CD 4351 gtctttgaaa tagcgaaaga aatgtctcct tgtacattat ggattcaaga CD 4401 tattcatgaa ttgaatattt gtcgttcgta taataagcta gaagctgatc CD 4451 ccaaatttct actttgccaa atattgaaga gtattggtca caagctcggc CD 4501 aactccgaca tccgcgagaa tgtcgttatt gccacgactc acgtacctgc CD 4551 gaggatagat ccagcttTag tagctccgaa tcggttaaac Caattaataa CD 4601 attttcggag gtccaatggg cgtcaacgtc agaaagaatt gtcaattcta CD 4651 ttacgtatca aaggtttcga ggtaggggct aatccgactc ttcttgagag CD 4701 tactgtgtct ggaactgcag gttatagtaa acgagattta cttcttctcg CD 4751 ctaatgaagc gttattgata ggtacttcca aagggagaaa gtttgtatgt CD 4801 agcaacacaa ttggattagc tttgcatagg caacattcga ctgttagtga CD 4851 tatgggcaat gagatggaat ctaattctga atgggaaatc tcttcctaca CD 4901 agatggcaga agtaaagaat agtttgacag atatttctct cacaactttt CD 4951 ccatttattg gtcgtgacga gttaaaaatg cgattttatt acttgtctaa CD 5001 ctggtatgtg gaaccttcaa caaccgaatc aacaattgat gaattcacta CD 5051 tgtttttgca tctcccagag ctaatagcca aattagtagc tcgcgattcg CD 5101 ttccaaatgg ataggggaaa agaagataat ttcattgtta tcgacaaact CD 5151 cgtagagaat gacttaaacc tagcttgtgg cgtcctagaa aacctctcga CD 5201 ataatttccc acgtccggaa atttgtaggg gagagagccg gcgcagtaat CD 5251 agttttcctc cccctcttcc tattggaaaa cccaagtatt gctcaggtgt CD 5301 aacctctcta agtcgctctt ccaaatctct gaaaagaggg agaattagta CD 5351 gtctaaccga tttcgagatg caacagtcac ccgaattaag aaactcagcg CD 5401 gcagagatat cgcgtgagat tacttggtcc cgcaaggctt ggcgtctccg CD 5451 tttcctgcga agcgggactt acgaattgat gggggtatta tccgaaccca CD 5501 accatttgta taacttaatt cttctttact acaatcagaa ttacataccc CD 5551 caacaagatt ttgaattcag taagattagg ggaaagagaa gtaagtggcg CD 5601 cgagaaaagc gggtatcttt tcagcttcga gaaatctgtc actaatggaa CD 5651 cagataattc cattaaaaga ttggaaaacc gattggataa tatgttgtta CD 5701 cgtgagcaat ttctcgaatt gggaatctct ggcgattcat ctaatgagta CD 5751 tgaaacacat tgtgatcgat tgaatgaaat gactcgactc ttcggggggc CD 5801 gcttcatctg ggaccccatg cttctgttcc agccagaccc taacattcct CD 5851 tccctgcgcc gcaacttgtt gtcaacgaaa gaactggcac ggaggcttca CD 5901 caccatttac ggtatgagaa ggcagcgcct tcagaagatg tcaaataata CD 5951 aaattaaaga ttttttcctc tatagcgaag agaatccaaa attgaaaccc CD 6001 gactcatctc tcaatcggcg gaataatctt cctctggaag aggaggagcg CD 6051 agattccgaa tacgtcaggg aaacctcttc cgtagatata catctgcaat CD 6101 atccgcagat atttactccc gttcgtttgg gttgctacgc ggtagcggag CD 6151 gatttcccgg aacgatttct tcggtttagg cttctggttc atagaaacaa CD 6201 atggctgaga cggaaccgtt ccccatttcg ggattttctt atttataata CD 6251 tgttgcttga aacttatgaa tatctatcca atccgtttcg gtttggtaaa CD 6301 gcatcactgg attga SQ SEQUENCE 2105 AA; MVKKVIEKGR GVRGRDYSSK VWDFLEIDAL NYFSESLKNH YLEELVVSPA STAEPFIRLS DLRFLSLLFL RNLRHSIMRG SGVTLEMLML LAIPIFMHCL SYKNSIDRGF VLAKVIDGGE GIRKKQTENY GNFSYDCFLQ FKRFLSVGRD GKREILEPYY LGLNKDISIS ASSSKEEREI RYDVTTPLPS GRWKARIMRR DSLLFGGDRF KGKTEGIQVV RGGRYLQDLV RFFKFYKNLV VSKNGSDCHQ NNFDSLLLRE ICDKQDLGRL QAIRLGNNSL SSVVLYPFES ESADSADPRR DGSAFPSEQE VFSNLYSFTS REKTILFRNS ISGLDYGEDE GGFPVLHAYS QVRNQLINRL TNFLSIIRKS NLPLGGKIVI DVSNRIKSER VFFPSGMKKN MPFTKISGKK LRLASGGYFD FVEIFPTYFK ASLEIPRETT NQNGNTNFLD ELEGGGNLDS IYSLVRLYGR NRIIPLYSTY IFLLHDYFCA LSTEYFFRIK YWLDGWTGGR VYISFTGIAT EETVFKWKDD VERLSNEYVT SHIGQCRNVQ SNLYRRLDAT RNLYVSPVKK FLGEAMKYNL AELICRVSLV GNELLNKTGV SLRSTNRHTK KYFHRFLDVL FLSKMIVAEA TRQKILIDTV DYCIEKLDDI DFEKLNKMDR IELDFFSSLS DGYIDEEILL FKTILEERKS FLVESRLLTS EKSVGSSTAL KPASNFTSLG LSCIEAIRAG FSGEALSIMG RQNWNLFVCD LSRGGNSIRN IGESLPKNIS DQMDEINNSP IRSRAGNNFI QRIKRGFFVG NCSNSYLDVL ENFYLSSDEK AISSSDILSL IHLQLSDSLS SNFSKQTAGE VADHLLTPIQ LISPNLHESA TIVTHLDGLP NSISDLNGLL ASLSSSPREA TDSFLFSCSN DGVSLEEASR NSDSWSDHQR TQPRRNLLVL DRVNSEKFFK DGLDSRNGSP TSQVYRNGLS IEYFWEPKKL DTPYWSLRFS LFNGVTSRFI AGSIGEDVTR QDAGFADSSA REEATCPSHF INFNELSEDL NRYKISWIFW RDSIGENWSL LGDYIPLFFT PTWWRYFCDL ITKAYPEIVL KISYDSNHDL RRISEGIARG LVGSAKGYLL RSLQRLGLIF GNNSINTISS ETDLLILEKI PDKAEILHPG EWSVSQFSNR PISYCCILSI LLVLLSLKHP LSAVSGSNFF HLWKRFATID YLTDPMRGSY LRKVMYSPPT SQMLTRDLLI HSLNRFLNCV SNILFFLFVK NEIDSWIFRR ESSDILDSNK ELLTQHLVTT KILYRYASKS KFNYDLSSNK IFHEPYPQDR SNVLAYLLQF WQNDLLGHKI RKLDPAEKWA FSALGRDILF SATTRRRDSL LNMPCRDIPI SLQSGLLPSK GILLVGPVET GRSSLIRDVA SNSYFPVVKL PLKKFIYNRS FFNNVRGNFI SKESVHRLNI VFEIAKEMSP CTLWIQDIHE LNICRSYNKL EADPKFLLCQ ILKSIGHKLG NSDIRENVVI ATTHVPARID PALVAPNRLN QLINFRRSNG RQRQKELSIL LRIKGFEVGA NPTLLESTVS GTAGYSKRDL LLLANEALLI GTSKGRKFVC SNTIGLALHR QHSTVSDMGN EMESNSEWEI SSYKMAEVKN SLTDISLTTF PFIGRDELKM RFYYLSNWYV EPSTTESTID EFTMFLHLPE LIAKLVARDS FQMDRGKEDN FIVIDKLVEN DLNLACGVLE NLSNNFPRPE ICRGESRRSN SFPPPLPIGK PKYCSGVTSL SRSSKSLKRG RISSLTDFEM QQSPELRNSA AEISREITWS RKAWRLRFLR SGTYELMGVL SEPNHLYNLI LLYYNQNYIP QQDFEFSKIR GKRSKWREKS GYLFSFEKSV TNGTDNSIKR LENRLDNMLL REQFLELGIS GDSSNEYETH CDRLNEMTRL FGGRFIWDPM LLFQPDPNIP SLRRNLLSTK ELARRLHTIY GMRRQRLQKM SNNKIKDFFL YSEENPKLKP DSSLNRRNNL PLEEEERDSE YVRETSSVDI HLQYPQIFTP VRLGCYAVAE DFPERFLRFR LLVHRNKWLR RNRSPFRDFL IYNMLLETYE YLSNPFRFGK ASLD* // ID AY178864_87 STANDARD; PRT; 151 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps7 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29452.3 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 136982 - 137434 FT DIRECTIONS : negative FT EDITING : 1 A(gCg) -> V(gTg) FT EDITING : 47 *(Taa) -> Q(Caa) FT EDITING : 99 S(tCa) -> L(tTa) FT EDITING : 115 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 453 NT; CD 1 gCgaacgaaa ttagaaatat cgaatcggat ccaatttatc gcaatcgatt CD 51 ggcaaacatg ctagttgatc gtatcctgaa aaacggcaaa aaatcactag CD 101 cttatcagat tttttatcag gctatgaagc ggattagaTa aaagacaaat CD 151 aggaacccac tgtctgttct gcgacaggca gtgcgtgggg taactcccga CD 201 tgtagtcaca gaaaccaaac gtgtgggtgg atcaacttat cgagttccca CD 251 ttgaagtagt acctgcaaaa ggaaaagctt tggccatccg gtggtCattg CD 301 atcgcatgtc gaaaacgctc aggtcgaagt atggctttaa ggtCgagtga CD 351 tgaattgata gatgccgcca gaaattctgg gagtgccata cggaagaagg CD 401 aagagactca taaagttgcg gaagctaaca aagcttttgc ccacttccgt CD 451 tag FT EDITED CDNA CD 1 gTgaacgaaa ttagaaatat cgaatcggat ccaatttatc gcaatcgatt CD 51 ggcaaacatg ctagttgatc gtatcctgaa aaacggcaaa aaatcactag CD 101 cttatcagat tttttatcag gctatgaagc ggattagaCa aaagacaaat CD 151 aggaacccac tgtctgttct gcgacaggca gtgcgtgggg taactcccga CD 201 tgtagtcaca gaaaccaaac gtgtgggtgg atcaacttat cgagttccca CD 251 ttgaagtagt acctgcaaaa ggaaaagctt tggccatccg gtggtTattg CD 301 atcgcatgtc gaaaacgctc aggtcgaagt atggctttaa ggtTgagtga CD 351 tgaattgata gatgccgcca gaaattctgg gagtgccata cggaagaagg CD 401 aagagactca taaagttgcg gaagctaaca aagcttttgc ccacttccgt CD 451 tag SQ SEQUENCE 151 AA; VNEIRNIESD PIYRNRLANM LVDRILKNGK KSLAYQIFYQ AMKRIRQKTN RNPLSVLRQA VRGVTPDVVT ETKRVGGSTY RVPIEVVPAK GKALAIRWLL IACRKRSGRS MALRLSDELI DAARNSGSAI RKKEETHKVA EANKAFAHFR * // ID AY258270_1 STANDARD; PRT; 197 AA. AC AY258270; DT Tue Jul 21 07:03:29 2009 DE Cucumis sativus MSC16 mitochondrial ribosomal protein L5 (rpl5) OS mitochondrion Cucumis sativus (cucumber) OC Cucumis sativus RN [1] RL Curr. Genet. 45 (1), 45-53 (2004) RL PUBMED 14586555 FT Full length CDS FT GENE : rpl5 FT NOTE : RPL5 FT LOCUS_TAG : FT PROTEIN_ID : AAP33159.1 FT PROTEIN_NAME : ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1773 - 2363 FT DIRECTIONS : positive FT EDITING : 15 S(tCa) -> L(tTa) FT EDITING : 19 P(cCg) -> L(cTg) FT EDITING : 34 S(tCg) -> L(tTg) FT EDITING : 60 R(Cgc) -> C(Tgc) FT EDITING : 175 P(cCa) -> L(cTa) FT EDITING : 176 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 591 NT; CD 1 atgggtccga gcctacaact ccagtttcat tacgaagata tatCacgtca CD 51 ggagcCgttg ctcaaactga attacaccaa cgttatggaa gttcctggat CD 101 Cgtctgaaat aagagtcgtg ccaaaggaac cctatgattt cagaagcaaa CD 151 aatggaaaat tggctatgga gattctgCgc ggtcagaaat tgatacagac CD 201 aaggggttcg acaggaaagt cctttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgagaaag cactctccga CD 301 gggcattcaa tgtttcattt ttttttcaaa ataattatag gaatagtact CD 351 gtctttctta aattctccgg gcgaaatacg gaaaaactcc attcaattcc CD 401 cgatggaaac ggagtttttc gaattcttcc cggaactggc agatcatttt CD 451 gagatcttct ctaatactct agggttccat gtgactattg tcacttcggc CD 501 caagacacaa gatgagactt tacCacCgtg gagcggcttt ttgagaaaaa CD 551 aatggaattt gaatttgaaa aaaagaaaaa gaaaagattg a FT EDITED CDNA CD 1 atgggtccga gcctacaact ccagtttcat tacgaagata tatTacgtca CD 51 ggagcTgttg ctcaaactga attacaccaa cgttatggaa gttcctggat CD 101 Tgtctgaaat aagagtcgtg ccaaaggaac cctatgattt cagaagcaaa CD 151 aatggaaaat tggctatgga gattctgTgc ggtcagaaat tgatacagac CD 201 aaggggttcg acaggaaagt cctttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgagaaag cactctccga CD 301 gggcattcaa tgtttcattt ttttttcaaa ataattatag gaatagtact CD 351 gtctttctta aattctccgg gcgaaatacg gaaaaactcc attcaattcc CD 401 cgatggaaac ggagtttttc gaattcttcc cggaactggc agatcatttt CD 451 gagatcttct ctaatactct agggttccat gtgactattg tcacttcggc CD 501 caagacacaa gatgagactt tacTacTgtg gagcggcttt ttgagaaaaa CD 551 aatggaattt gaatttgaaa aaaagaaaaa gaaaagattg a SQ SEQUENCE 197 AA; MGPSLQLQFH YEDILRQELL LKLNYTNVME VPGLSEIRVV PKEPYDFRSK NGKLAMEILC GQKLIQTRGS TGKSFRSNPF LESNKDKGYV SDLARESTLR GHSMFHFFFK IIIGIVLSFL NSPGEIRKNS IQFPMETEFF EFFPELADHF EIFSNTLGFH VTIVTSAKTQ DETLLLWSGF LRKKWNLNLK KRKRKD* // ID AY258273_1 STANDARD; PRT; 197 AA. AC AY258273; DT Tue Jul 21 07:03:29 2009 DE Cucumis sativus MSC16 ribosomal protein L5 (rpl5) gene, complete OS mitochondrion Cucumis sativus (cucumber) OC Cucumis sativus RN [1] RL Curr. Genet. 45 (1), 45-53 (2004) RL PUBMED 14586555 FT Full length CDS FT GENE : rpl5 FT NOTE : RPL5 FT LOCUS_TAG : FT PROTEIN_ID : AAP33161.1 FT PROTEIN_NAME : ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 7881 - 8471 FT DIRECTIONS : positive FT EDITING : 15 S(tCa) -> L(tTa) FT EDITING : 19 P(cCg) -> L(cTg) FT EDITING : 34 S(tCg) -> L(tTg) FT EDITING : 60 R(Cgc) -> C(Tgc) FT EDITING : 175 P(cCa) -> L(cTa) FT EDITING : 176 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 591 NT; CD 1 atgggtccga gcctacaact ccagtttcat tacgaagata tatCacgtca CD 51 ggagcCgttg ctcaaactga attacaccaa cgttatggaa gttcctggat CD 101 Cgtctgaaat aagagtcgtg ccaaaggaac cctatgattt cagaagcaaa CD 151 aatggaaaat tggctatgga gattctgCgc ggtcagaaat tgatacagac CD 201 aaggggttcg acaggaaagt cctttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgagaaag cactctccga CD 301 gggcattcaa tgtttcattt ttttttcaaa ataattatag gaatagtact CD 351 gtctttctta aattctccgg gcgaaatacg gaaaaactcc attcaattcc CD 401 cgatggaaac ggagtttttc gaattcttcc cggaactggc agatcatttt CD 451 gagatcttct ctaatactct agggttccat gtgactattg tcacttcggc CD 501 caagacacaa gatgagactt tacCacCgtg gagcggcttt ttgagaaaaa CD 551 aatggaattt gaatttgaaa aaaagaaaaa gaaaagattg a FT EDITED CDNA CD 1 atgggtccga gcctacaact ccagtttcat tacgaagata tatTacgtca CD 51 ggagcTgttg ctcaaactga attacaccaa cgttatggaa gttcctggat CD 101 Tgtctgaaat aagagtcgtg ccaaaggaac cctatgattt cagaagcaaa CD 151 aatggaaaat tggctatgga gattctgTgc ggtcagaaat tgatacagac CD 201 aaggggttcg acaggaaagt cctttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgagaaag cactctccga CD 301 gggcattcaa tgtttcattt ttttttcaaa ataattatag gaatagtact CD 351 gtctttctta aattctccgg gcgaaatacg gaaaaactcc attcaattcc CD 401 cgatggaaac ggagtttttc gaattcttcc cggaactggc agatcatttt CD 451 gagatcttct ctaatactct agggttccat gtgactattg tcacttcggc CD 501 caagacacaa gatgagactt tacTacTgtg gagcggcttt ttgagaaaaa CD 551 aatggaattt gaatttgaaa aaaagaaaaa gaaaagattg a SQ SEQUENCE 197 AA; MGPSLQLQFH YEDILRQELL LKLNYTNVME VPGLSEIRVV PKEPYDFRSK NGKLAMEILC GQKLIQTRGS TGKSFRSNPF LESNKDKGYV SDLARESTLR GHSMFHFFFK IIIGIVLSFL NSPGEIRKNS IQFPMETEFF EFFPELADHF EIFSNTLGFH VTIVTSAKTQ DETLLLWSGF LRKKWNLNLK KRKRKD* // ID AY258275_1 STANDARD; PRT; 197 AA. AC AY258275; DT Tue Jul 21 07:03:29 2009 DE Cucumis sativus Calypso ribosomal protein L5 (rpl5) gene, complete OS mitochondrion Cucumis sativus (cucumber) OC Cucumis sativus RN [1] RL Curr. Genet. 45 (1), 45-53 (2004) RL PUBMED 14586555 FT Full length CDS FT GENE : rpl5 FT NOTE : RPL5 FT LOCUS_TAG : FT PROTEIN_ID : AAP33162.1 FT PROTEIN_NAME : ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3364 - 3954 FT DIRECTIONS : positive FT EDITING : 15 S(tCa) -> L(tTa) FT EDITING : 19 P(cCg) -> L(cTg) FT EDITING : 34 S(tCg) -> L(tTg) FT EDITING : 60 R(Cgc) -> C(Tgc) FT EDITING : 175 P(cCa) -> L(cTa) FT EDITING : 176 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 591 NT; CD 1 atgggtccga gcctacaact ccagtttcat tacgaagata tatCacgtca CD 51 ggagcCgttg ctcaaactga attacaccaa cgttatggaa gttcctggat CD 101 Cgtctgaaat aagagtcgtg ccaaaggaac cctatgattt cagaagcaaa CD 151 aatggaaaat tggctatgga gattctgCgc ggtcagaaat tgatacagac CD 201 aaggggttcg acaggaaagt cctttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgagaaag cactctccga CD 301 gggcattcaa tgtttcattt ttttttcaaa ataattatag gaatagtact CD 351 gtctttctta aattctccgg gcgaaatacg gaaaaactcc attcaattcc CD 401 cgatggaaac ggagtttttc gaattcttcc cggaactggc agatcatttt CD 451 gagatcttct ctaatactct agggttccat gtgactattg tcacttcggc CD 501 caagacacaa gatgagactt tacCacCgtg gagcggcttt ttgagaaaaa CD 551 aatggaattt gaatttgaaa aaaagaaaaa gaaaagattg a FT EDITED CDNA CD 1 atgggtccga gcctacaact ccagtttcat tacgaagata tatTacgtca CD 51 ggagcTgttg ctcaaactga attacaccaa cgttatggaa gttcctggat CD 101 Tgtctgaaat aagagtcgtg ccaaaggaac cctatgattt cagaagcaaa CD 151 aatggaaaat tggctatgga gattctgTgc ggtcagaaat tgatacagac CD 201 aaggggttcg acaggaaagt cctttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgagaaag cactctccga CD 301 gggcattcaa tgtttcattt ttttttcaaa ataattatag gaatagtact CD 351 gtctttctta aattctccgg gcgaaatacg gaaaaactcc attcaattcc CD 401 cgatggaaac ggagtttttc gaattcttcc cggaactggc agatcatttt CD 451 gagatcttct ctaatactct agggttccat gtgactattg tcacttcggc CD 501 caagacacaa gatgagactt tacTacTgtg gagcggcttt ttgagaaaaa CD 551 aatggaattt gaatttgaaa aaaagaaaaa gaaaagattg a SQ SEQUENCE 197 AA; MGPSLQLQFH YEDILRQELL LKLNYTNVME VPGLSEIRVV PKEPYDFRSK NGKLAMEILC GQKLIQTRGS TGKSFRSNPF LESNKDKGYV SDLARESTLR GHSMFHFFFK IIIGIVLSFL NSPGEIRKNS IQFPMETEFF EFFPELADHF EIFSNTLGFH VTIVTSAKTQ DETLLLWSGF LRKKWNLNLK KRKRKD* // ID AY293019_1 STANDARD; PRT; 142 AA. AC AY293019; DT Tue Jul 21 07:03:30 2009 DE Sanguinaria canadensis small subunit ribosomal protein (rps11) OS mitochondrion Sanguinaria canadensis (red puccoon) OC Sanguinaria canadensis RN [1] RL Nature 424 (6945), 197-201 (2003) RL PUBMED 12853958 FT C-terminal not determined FT GENE : rps11 FT NOTE : Rps11 FT LOCUS_TAG : FT PROTEIN_ID : AAP76349.1 FT PROTEIN_NAME : small subunit ribosomal protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 376 - 801 FT DIRECTIONS : positive FT EDITING : 26 F(ttT) -> F(ttC) FT EDITING : 31 L(tTg) -> S(tCg) FT EDITING : 48 L(cTa) -> P(cCa) FT EDITING : 49 L(cTg) -> P(cCg) FT EDITING : 117 F(ttT) -> F(ttC) FT CODON_START : 1 CL CDNALEN 426 NT; CD 1 atgccccagg aaaaaacgac ggccgagcgc gtagagcaac aagttattgc CD 51 gggcaggagt ttcaaatcca tgaacttTgt acagagcatt tTggaggaag CD 101 atgagcaatt ggagcggaaa aacaaagatt ttgtccattt acTacTgatc CD 151 cacaataata cctttgttac cgtgacggat gctaggggga ataaaaaaac CD 201 tggggcctcc gcaggttgtt tggaggaaag aaaagggcgg tctcgtcttt CD 251 ctcggtatgc tgctgaagct actgcggaac atgtcgggcg atccgccaga CD 301 aagatgggtt tgaagtcagt tgtaatgaaa gtgaaaggat ctagttattt CD 351 Taggaaaaag aaaaaagtga tcttgagctg gagagaaggt tttcgaggtg CD 401 aaggagtagg agatcaatct ccaatt FT EDITED CDNA CD 1 atgccccagg aaaaaacgac ggccgagcgc gtagagcaac aagttattgc CD 51 gggcaggagt ttcaaatcca tgaacttCgt acagagcatt tCggaggaag CD 101 atgagcaatt ggagcggaaa aacaaagatt ttgtccattt acCacCgatc CD 151 cacaataata cctttgttac cgtgacggat gctaggggga ataaaaaaac CD 201 tggggcctcc gcaggttgtt tggaggaaag aaaagggcgg tctcgtcttt CD 251 ctcggtatgc tgctgaagct actgcggaac atgtcgggcg atccgccaga CD 301 aagatgggtt tgaagtcagt tgtaatgaaa gtgaaaggat ctagttattt CD 351 Caggaaaaag aaaaaagtga tcttgagctg gagagaaggt tttcgaggtg CD 401 aaggagtagg agatcaatct ccaatt SQ SEQUENCE 142 AA; MPQEKTTAER VEQQVIAGRS FKSMNFVQSI SEEDEQLERK NKDFVHLPPI HNNTFVTVTD ARGNKKTGAS AGCLEERKGR SRLSRYAAEA TAEHVGRSAR KMGLKSVVMK VKGSSYFRKK KKVILSWREG FRGEGVGDQS PI // ID AY345867_1 STANDARD; PRT; 94 AA. AC AY345867; DT Tue Jul 21 07:03:33 2009 DE Cycas revoluta ribosomal protein S19 (rps19), ribosomal protein S3 OS mitochondrion Cycas revoluta OC Cycas revoluta RN [1] RL J. Mol. Evol. 60 (2), 196-206 (2005) RL PUBMED 15785848 FT Full length CDS FT GENE : rps19 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR01944.1 FT PROTEIN_NAME : ribosomal protein S19 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 6 - 287 FT DIRECTIONS : positive FT EDITING : 11 S(tCc) -> F(tTc) FT EDITING : 15 L(Ctc) -> F(Ttc) FT EDITING : 16 S(tCg) -> L(tTg) FT EDITING : 17 S(tCg) -> L(tTg) FT EDITING : 32 R(Cgg) -> W(Tgg) FT EDITING : 37 P(Ccc) -> S(Tcc) FT EDITING : 42 S(tCt) -> F(tTt) FT EDITING : 46 F(ttC) -> F(ttT) FT EDITING : 55 S(tCt) -> F(tTt) FT EDITING : 69 S(tCt) -> F(tTt) FT EDITING : 72 S(tCc) -> F(tTc) FT EDITING : 74 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 282 NT; CD 1 atgccacgac gatctatatg gaagggcagt tCcgttgatg ctCtctCgtC CD 51 gaaaatgagg agcaagagag agaatatttc tagcaggaaa attCggtcac CD 101 gtagatctCc cattttgcca gaatCtgttg attgcttCgt acgaatttat CD 151 aacggaaaaa cctCtgttcg ttgcaagatc actgaaggaa aggttggtca CD 201 taaatCtgga gagtCcgctt Ctgcacggaa acgaaaacct tcgagaaccg CD 251 atatcggacc gggaagaaag gggaaaaggt aa FT EDITED CDNA CD 1 atgccacgac gatctatatg gaagggcagt tTcgttgatg ctTtctTgtT CD 51 gaaaatgagg agcaagagag agaatatttc tagcaggaaa attTggtcac CD 101 gtagatctTc cattttgcca gaatTtgttg attgcttTgt acgaatttat CD 151 aacggaaaaa cctTtgttcg ttgcaagatc actgaaggaa aggttggtca CD 201 taaatTtgga gagtTcgctt Ttgcacggaa acgaaaacct tcgagaaccg CD 251 atatcggacc gggaagaaag gggaaaaggt aa SQ SEQUENCE 94 AA; MPRRSIWKGS FVDAFLLKMR SKRENISSRK IWSRRSSILP EFVDCFVRIY NGKTFVRCKI TEGKVGHKFG EFAFARKRKP SRTDIGPGRK GKR* // ID AY345867_2 STANDARD; PRT; 580 AA. AC AY345867; DT Tue Jul 21 07:03:33 2009 DE Cycas revoluta ribosomal protein S19 (rps19), ribosomal protein S3 OS mitochondrion Cycas revoluta OC Cycas revoluta RN [1] RL J. Mol. Evol. 60 (2), 196-206 (2005) RL PUBMED 15785848 FT Full length CDS FT GENE : rps3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR01945.1 FT PROTEIN_NAME : ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 25/2 FT INTRON 90/0 FT EDITING : 14 P(cCg) -> L(cTg) FT EDITING : 20 P(Cca) -> S(Tca) FT EDITING : 21 S(agC) -> S(agT) FT EDITING : 22 R(Cgg) -> W(Tgg) FT EDITING : 23 S(tCc) -> F(tTc) FT EDITING : 28 H(Cat) -> Y(Tat) FT EDITING : 74 S(tCt) -> F(tTt) FT EDITING : 171 V(gtC) -> V(gtT) FT EDITING : 186 A(gcC) -> A(gcT) FT EDITING : 207 S(tCC) -> F(tTT) FT EDITING : 212 F(ttC) -> F(ttT) FT EDITING : 245 S(tCg) -> L(tTg) FT EDITING : 267 P(cCc) -> L(cTc) FT EDITING : 325 R(Cgc) -> C(Tgc) FT EDITING : 343 S(tCg) -> L(tTg) FT EDITING : 355 P(cCa) -> L(cTa) FT EDITING : 370 P(cCa) -> L(cTa) FT EDITING : 454 T(acC) -> T(acT) FT EDITING : 456 I(atC) -> I(atT) FT EDITING : 470 P(cCa) -> L(cTa) FT EDITING : 479 P(cCg) -> L(cTg) FT EDITING : 512 R(Cgt) -> C(Tgt) FT EDITING : 516 S(tCg) -> L(tTg) FT EDITING : 537 S(tCt) -> F(tTt) FT EDITING : 543 H(Cat) -> Y(Tat) FT CODON_START : 1 CL CDNALEN 1740 NT; CD 1 atggcacgag aagtcaatcc gatttcagtc agacttaatc Cgaatcgtag CD 51 ttcagatCca agCCggtCca gtgattatta tCatgggaaa ttggtgtatc CD 101 aagatgtcaa tcttagagat tatttcggtt cgatacgtcc acctacgaga CD 151 aaaacctttg gctttcgtct cggtaggtgt attattcatc attttaccaa CD 201 aaggacattc attcatttat Ctcttccccg tcgaccacga cgactgaaac CD 251 gacgcggcaa atcaaggccc ggaaagggcc ggtggtgggc atttgggaaa CD 301 gtcaggtcga tcgggcccga cgacggtaca gaggaagaac gaaacgaagt CD 351 gaggggccgc cggcgggggg caggaaaaac tgtcaagtcg atcaggctcg CD 401 acgaccgtac aggggaagag cgaaacgaag tcaggatttg gccgagaaaa CD 451 aagcaacgct atggatacca tgaccgatca ccatcgagac agaagaatct CD 501 ttcgaaatgg gtCagcggtt ggatggccta caagcatcca atgagtggga CD 551 aatacgcCgc gaagaagagg caatatgtaa atgacatagc gttctcgata CD 601 gaagatgaca cttatgtttC Cggaaaaaca aagttCttca agttcctttt CD 651 cccaaagaag ttccgctccg acggcccgac gagtaagaga cttctacaga CD 701 ccatccctgc tgtgcgtccc tcctttaatt attCggtcat gcaatacttc CD 751 tttcatatga agaaccaaat tcattttgac cccatagacg tcgtagttcC CD 801 caataatctc gtggcaccgg gcgtggctga accgggggga gcggatgaac CD 851 agggaggaag cttagataag agaatacgct ctcgcattgg tttttttgta CD 901 gaaagcttga ccgccaagac cgagcagggc gagtttttgg ccgaagccaa CD 951 aaaaaggttt acccacttaa tcCgccaagc gaatgattct cgctttgcga CD 1001 gaacaacgaa aacctgttgg tccatatCgc tctttccttt cttcggtgct CD 1051 acctttttct ttcCaaggga taacctcggg gtgtctaata acaaaattga CD 1101 tgatgcccCa ccactaaggg aacaactcct gggtaaattc agaagaaaat CD 1151 taaggaacct cctgggtaag gagaaggtaa tcaaattgat ggaaaaatta CD 1201 atagacctag gtgggatagg agaattgata aagggaatag ggatgataga CD 1251 tgctataata ctgagaaaca gaagtggaag aatcccgtac gggtacaact CD 1301 attatttgaa cgaagtgcaa aaaatgcgat ctttgttgtc tgatggaaca CD 1351 aacactaata cCtcaatCgg gtcggtcaag atcgaatctg tttatcaaag CD 1401 tgcttctcCa attgctcaag acatatcttt tcaacCgagg aacggaacag CD 1451 gatcatttcg ttccattttt gggcaaatag ttagggatat tacattcgta CD 1501 atgcccaaaa gggtgaaggg gatccgtatt tgtCgttcag gtcgatCgaa CD 1551 aggtgcagaa atagctagaa ctgaatgcag ggagtatgga aaaacatctt CD 1601 gtaacgtatC tgaccataaa attgatCatg cttctgcgaa agtatgtact CD 1651 cgttatggaa tctcaggtgt caaagtgtgg atctcatata gtaacgaaag CD 1701 aaagggacgt gccatatccg aaacgtacaa gatatcgtaa FT EDITED CDNA CD 1 atggcacgag aagtcaatcc gatttcagtc agacttaatc Tgaatcgtag CD 51 ttcagatTca agTTggtTca gtgattatta tTatgggaaa ttggtgtatc CD 101 aagatgtcaa tcttagagat tatttcggtt cgatacgtcc acctacgaga CD 151 aaaacctttg gctttcgtct cggtaggtgt attattcatc attttaccaa CD 201 aaggacattc attcatttat Ttcttccccg tcgaccacga cgactgaaac CD 251 gacgcggcaa atcaaggccc ggaaagggcc ggtggtgggc atttgggaaa CD 301 gtcaggtcga tcgggcccga cgacggtaca gaggaagaac gaaacgaagt CD 351 gaggggccgc cggcgggggg caggaaaaac tgtcaagtcg atcaggctcg CD 401 acgaccgtac aggggaagag cgaaacgaag tcaggatttg gccgagaaaa CD 451 aagcaacgct atggatacca tgaccgatca ccatcgagac agaagaatct CD 501 ttcgaaatgg gtTagcggtt ggatggccta caagcatcca atgagtggga CD 551 aatacgcTgc gaagaagagg caatatgtaa atgacatagc gttctcgata CD 601 gaagatgaca cttatgtttT Tggaaaaaca aagttTttca agttcctttt CD 651 cccaaagaag ttccgctccg acggcccgac gagtaagaga cttctacaga CD 701 ccatccctgc tgtgcgtccc tcctttaatt attTggtcat gcaatacttc CD 751 tttcatatga agaaccaaat tcattttgac cccatagacg tcgtagttcT CD 801 caataatctc gtggcaccgg gcgtggctga accgggggga gcggatgaac CD 851 agggaggaag cttagataag agaatacgct ctcgcattgg tttttttgta CD 901 gaaagcttga ccgccaagac cgagcagggc gagtttttgg ccgaagccaa CD 951 aaaaaggttt acccacttaa tcTgccaagc gaatgattct cgctttgcga CD 1001 gaacaacgaa aacctgttgg tccatatTgc tctttccttt cttcggtgct CD 1051 acctttttct ttcTaaggga taacctcggg gtgtctaata acaaaattga CD 1101 tgatgcccTa ccactaaggg aacaactcct gggtaaattc agaagaaaat CD 1151 taaggaacct cctgggtaag gagaaggtaa tcaaattgat ggaaaaatta CD 1201 atagacctag gtgggatagg agaattgata aagggaatag ggatgataga CD 1251 tgctataata ctgagaaaca gaagtggaag aatcccgtac gggtacaact CD 1301 attatttgaa cgaagtgcaa aaaatgcgat ctttgttgtc tgatggaaca CD 1351 aacactaata cTtcaatTgg gtcggtcaag atcgaatctg tttatcaaag CD 1401 tgcttctcTa attgctcaag acatatcttt tcaacTgagg aacggaacag CD 1451 gatcatttcg ttccattttt gggcaaatag ttagggatat tacattcgta CD 1501 atgcccaaaa gggtgaaggg gatccgtatt tgtTgttcag gtcgatTgaa CD 1551 aggtgcagaa atagctagaa ctgaatgcag ggagtatgga aaaacatctt CD 1601 gtaacgtatT tgaccataaa attgatTatg cttctgcgaa agtatgtact CD 1651 cgttatggaa tctcaggtgt caaagtgtgg atctcatata gtaacgaaag CD 1701 aaagggacgt gccatatccg aaacgtacaa gatatcgtaa SQ SEQUENCE 580 AA; MAREVNPISV RLNLNRSSDS SWFSDYYYGK LVYQDVNLRD YFGSIRPPTR KTFGFRLGRC IIHHFTKRTF IHLFLPRRPR RLKRRGKSRP GKGRWWAFGK VRSIGPDDGT EEERNEVRGR RRGAGKTVKS IRLDDRTGEE RNEVRIWPRK KQRYGYHDRS PSRQKNLSKW VSGWMAYKHP MSGKYAAKKR QYVNDIAFSI EDDTYVFGKT KFFKFLFPKK FRSDGPTSKR LLQTIPAVRP SFNYLVMQYF FHMKNQIHFD PIDVVVLNNL VAPGVAEPGG ADEQGGSLDK RIRSRIGFFV ESLTAKTEQG EFLAEAKKRF THLICQANDS RFARTTKTCW SILLFPFFGA TFFFLRDNLG VSNNKIDDAL PLREQLLGKF RRKLRNLLGK EKVIKLMEKL IDLGGIGELI KGIGMIDAII LRNRSGRIPY GYNYYLNEVQ KMRSLLSDGT NTNTSIGSVK IESVYQSASL IAQDISFQLR NGTGSFRSIF GQIVRDITFV MPKRVKGIRI CCSGRLKGAE IARTECREYG KTSCNVFDHK IDYASAKVCT RYGISGVKVW ISYSNERKGR AISETYKIS* // ID AY345867_3 STANDARD; PRT; 164 AA. AC AY345867; DT Tue Jul 21 07:03:33 2009 DE Cycas revoluta ribosomal protein S19 (rps19), ribosomal protein S3 OS mitochondrion Cycas revoluta OC Cycas revoluta RN [1] RL J. Mol. Evol. 60 (2), 196-206 (2005) RL PUBMED 15785848 FT Full length CDS FT GENE : rpl16 FT NOTE : truncated due to internal stop codon via RNA FT LOCUS_TAG : FT PROTEIN_ID : AAR01946.1 FT PROTEIN_NAME : truncated ribosomal protein L16 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 6887 - 7378 FT DIRECTIONS : positive FT EDITING : 13 Q(Cag) -> *(Tag) FT EDITING : 29 P(cCa) -> L(cTa) FT EDITING : 93 R(Cgg) -> W(Tgg) FT EDITING : 100 P(cCc) -> L(cTc) FT EDITING : 111 T(aCg) -> M(aTg) FT EDITING : 125 A(gCg) -> V(gTg) FT EDITING : 126 S(tcC) -> S(tcT) FT EDITING : 131 P(cCa) -> L(cTa) FT EDITING : 153 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 492 NT; CD 1 atgcttctgc gaaagtatgt actcgttatg gaatctCagg tgtcaaagtg CD 51 tggatctcat atagtaacga aagaaaggga cgtgcCat