ID AB007034_1 STANDARD; PRT; 507 AA. AC AB007034; DT Tue Jul 21 06:59:59 2009 DE Beta vulgaris subsp. vulgaris mitochondrial atpA gene for F1 ATPase OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Curr. Genet. 24 (1-2), 164-170 (1993) RL PUBMED 8358823 FT Full length CDS FT GENE : atpA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA32243.1 FT PROTEIN_NAME : F1 ATPase subunit alpha FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 181 - 1701 FT DIRECTIONS : positive FT EDITING : 393 P(cCa) -> L(cTa) FT EDITING : 431 P(cCg) -> L(cTg) FT EDITING : 472 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1521 NT; CD 1 atggaattct ctcccagagc tgcggaacta acgaatctat tagaaagtag CD 51 aattaccaac ttttacacga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacgtgttt atggattgaa cgagattcaa CD 151 gctggggaaa tggtggaatt tgccagcggt gtgaaaggaa tagccttaaa CD 201 tcttgagaat gagaatgtag ggattgttgt ctttggtagt gataccgcta CD 251 ttaaagaggg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gcgggaaagg ctatgctagg gcgtgtggtc gacgcgttgg gagtacctat CD 351 tgatggaaga ggggctctaa gcgatcacga gcgtcgacgt gtcgaagtga CD 401 aagcccccgg gattattgaa cgtaaatctg tgcacgagcc tatgcaaacc CD 451 gggttaaagg cggtagatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttataatc ggggaccgac aaacgggaaa aacagctatt gctatcgata CD 551 ccatattaaa ccaaaagcaa ctgaactcaa aggccacctc tgagagtgag CD 601 acattgtatt gtgtctatgt agcggttgga cagaaacgtt caactgtggc CD 651 acaattagtt caaattcttt cagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctcttcaatt tctggcccca CD 751 tattctgggt gtgctatggg agaatatttc cgcgataatg gaatgcacgc CD 801 attaataatc tatgatgatc ttagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggcgac CD 901 gttttctatt tacattcccg tctcttagaa agagccgcta aacgatcgga CD 951 ccagacaggc gcaggtagct tgaccgccct acccgtcatt gaaacacaag CD 1001 ctggagacgt atcggcctat attcccacca atgtgatctc cattactgat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtc ggcttatctg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtctgc ggtagtcCaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgcctttgc tcaatttggg tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct tacagaagta cCgaaacaac CD 1301 cacaatatgc accacttcca attgaaaaac aaattctagt catttacgca CD 1351 gctgtcaatg gattctgtga tcgaatgcca ctagataaaa tttctcaata CD 1401 tgagcgaacc attcCaaata gtgtaaaacc agaattatta caatccctta CD 1451 agggggggtt aactaacgaa aaaaagatgg aactagattc cttcttaaaa CD 1501 gaatgcgctt tgaattacta a FT EDITED CDNA CD 1 atggaattct ctcccagagc tgcggaacta acgaatctat tagaaagtag CD 51 aattaccaac ttttacacga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacgtgttt atggattgaa cgagattcaa CD 151 gctggggaaa tggtggaatt tgccagcggt gtgaaaggaa tagccttaaa CD 201 tcttgagaat gagaatgtag ggattgttgt ctttggtagt gataccgcta CD 251 ttaaagaggg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gcgggaaagg ctatgctagg gcgtgtggtc gacgcgttgg gagtacctat CD 351 tgatggaaga ggggctctaa gcgatcacga gcgtcgacgt gtcgaagtga CD 401 aagcccccgg gattattgaa cgtaaatctg tgcacgagcc tatgcaaacc CD 451 gggttaaagg cggtagatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttataatc ggggaccgac aaacgggaaa aacagctatt gctatcgata CD 551 ccatattaaa ccaaaagcaa ctgaactcaa aggccacctc tgagagtgag CD 601 acattgtatt gtgtctatgt agcggttgga cagaaacgtt caactgtggc CD 651 acaattagtt caaattcttt cagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctcttcaatt tctggcccca CD 751 tattctgggt gtgctatggg agaatatttc cgcgataatg gaatgcacgc CD 801 attaataatc tatgatgatc ttagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggcgac CD 901 gttttctatt tacattcccg tctcttagaa agagccgcta aacgatcgga CD 951 ccagacaggc gcaggtagct tgaccgccct acccgtcatt gaaacacaag CD 1001 ctggagacgt atcggcctat attcccacca atgtgatctc cattactgat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtc ggcttatctg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtctgc ggtagtcTaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgcctttgc tcaatttggg tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct tacagaagta cTgaaacaac CD 1301 cacaatatgc accacttcca attgaaaaac aaattctagt catttacgca CD 1351 gctgtcaatg gattctgtga tcgaatgcca ctagataaaa tttctcaata CD 1401 tgagcgaacc attcTaaata gtgtaaaacc agaattatta caatccctta CD 1451 agggggggtt aactaacgaa aaaaagatgg aactagattc cttcttaaaa CD 1501 gaatgcgctt tgaattacta a SQ SEQUENCE 507 AA; MEFSPRAAEL TNLLESRITN FYTNFQVDEI GRVVSVGDGI ARVYGLNEIQ AGEMVEFASG VKGIALNLEN ENVGIVVFGS DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DALGVPIDGR GALSDHERRR VEVKAPGIIE RKSVHEPMQT GLKAVDSLVP IGRGQRELII GDRQTGKTAI AIDTILNQKQ LNSKATSESE TLYCVYVAVG QKRSTVAQLV QILSEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSLKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV LKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDKISQYERT ILNSVKPELL QSLKGGLTNE KKMELDSFLK ECALNY* // ID AB008450_1 STANDARD; PRT; 149 AA. AC AB008450; DT Tue Jul 21 06:59:59 2009 DE Beta vulgaris mitochondrial rps7 gene for ribosomal protein S7, OS mitochondrion Beta vulgaris OC Beta vulgaris RN [1] RL Physiol. Plantarum 102, 325-327 (1998) FT Full length CDS FT GENE : rps7 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA28749.1 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1060 - 1506 FT DIRECTIONS : positive FT EDITING : 39 P(cCa) -> L(cTa) FT EDITING : 111 S(tCa) -> L(tTa) FT EDITING : 142 F(ttC) -> F(ttT) FT CODON_START : 1 CL CDNALEN 447 NT; CD 1 atggggggct tagatagtga gcaaaaacaa ttgatcaaga aattggtcaa CD 51 ctttcacatg aaagaaggta aaagaacgaa ggttcgtgct attgtttatc CD 101 aaacttttca tcgccCagct cgaactgaag gcgatgtaat caaacttatg CD 151 attgacgccg tagagaatat aaagcccata tgcaaagtag aaaaagtcag CD 201 agtagcaggt actatttatg atgtccccgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggatccttg aagcagcttt caaacgacgt CD 301 atatcctaca ggataagctt agagaaatgt tCatttgatg agatactgga CD 351 tgcttaccga aagaggggaa tttcgcgtaa gaaaagggag aatcttcatg CD 401 gactggcttc cgccaatcga agtttCgcgc atttcagatg gtggtaa FT EDITED CDNA CD 1 atggggggct tagatagtga gcaaaaacaa ttgatcaaga aattggtcaa CD 51 ctttcacatg aaagaaggta aaagaacgaa ggttcgtgct attgtttatc CD 101 aaacttttca tcgccTagct cgaactgaag gcgatgtaat caaacttatg CD 151 attgacgccg tagagaatat aaagcccata tgcaaagtag aaaaagtcag CD 201 agtagcaggt actatttatg atgtccccgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggatccttg aagcagcttt caaacgacgt CD 301 atatcctaca ggataagctt agagaaatgt tTatttgatg agatactgga CD 351 tgcttaccga aagaggggaa tttcgcgtaa gaaaagggag aatcttcatg CD 401 gactggcttc cgccaatcga agtttTgcgc atttcagatg gtggtaa SQ SEQUENCE 149 AA; MGGLDSEQKQ LIKKLVNFHM KEGKRTKVRA IVYQTFHRLA RTEGDVIKLM IDAVENIKPI CKVEKVRVAG TIYDVPGIVA RDRQQTLAIR WILEAAFKRR ISYRISLEKC LFDEILDAYR KRGISRKKRE NLHGLASANR SFAHFRWW* // ID AB013664_1 STANDARD; PRT; 195 AA. AC AB013664; DT Tue Jul 21 07:00:00 2009 DE Anthoceros punctatus chloroplast psaA gene for photosystem I P700 OS chloroplast Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT N-terminal not determined FT C-terminal not determined FT GENE : psaA FT NOTE : possibly edited FT LOCUS_TAG : FT PROTEIN_ID : BAA83440.1 FT PROTEIN_NAME : photosystem I P700 apoprotein A1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 583 FT DIRECTIONS : positive FT EDITING : 2 *(Taa) -> Q(Caa) FT EDITING : 7 *(Tag) -> Q(Cag) FT EDITING : 64 *(Taa) -> Q(Caa) FT EDITING : 123 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 583 NT; CD 1 ttgTaatacg actcactaTa gggcgaattg ggcccgacgt cgcatgctcc CD 51 cggccgccat ggcgccggga ttaagggtcc tagtactacc acttggattt CD 101 ggaatctaca tgctgatgct catgatttcg atagccatac taatgattta CD 151 gaagaagttt ctcgcaaagt ttttagtgct cactttggtT aattagccat CD 201 catttttatt tggttgagtg gaatgtattt ccatggggcc agattcccca CD 251 attatgaagc atggttaggt gatcctactc acattaagcc tagtgcccaa CD 301 gttgtttggc caatagtagg tcaagaaatt ttgaatggag acgtaggtgg CD 351 tggttttcaa ggaataTaaa taacctctgg ttttttccaa atttggcgag CD 401 catctggaat aactagtgaa ttacaacttt attctactgc aattggtgga CD 451 ttgatcttcg cggcattaat gctttttgct ggttggtttc actatcataa CD 501 agctgctccc aaattagttt ggtttcaaga tgtggaatct atgttgaatc CD 551 accatctagc tgggttattg ggactaggtt ctt FT EDITED CDNA CD 1 ttgCaatacg actcactaCa gggcgaattg ggcccgacgt cgcatgctcc CD 51 cggccgccat ggcgccggga ttaagggtcc tagtactacc acttggattt CD 101 ggaatctaca tgctgatgct catgatttcg atagccatac taatgattta CD 151 gaagaagttt ctcgcaaagt ttttagtgct cactttggtC aattagccat CD 201 catttttatt tggttgagtg gaatgtattt ccatggggcc agattcccca CD 251 attatgaagc atggttaggt gatcctactc acattaagcc tagtgcccaa CD 301 gttgtttggc caatagtagg tcaagaaatt ttgaatggag acgtaggtgg CD 351 tggttttcaa ggaataCaaa taacctctgg ttttttccaa atttggcgag CD 401 catctggaat aactagtgaa ttacaacttt attctactgc aattggtgga CD 451 ttgatcttcg cggcattaat gctttttgct ggttggtttc actatcataa CD 501 agctgctccc aaattagttt ggtttcaaga tgtggaatct atgttgaatc CD 551 accatctagc tgggttattg ggactaggtt ctt SQ SEQUENCE 195 AA; LQYDSLQGEL GPTSHAPGRH GAGIKGPSTT TWIWNLHADA HDFDSHTNDL EEVSRKVFSA HFGQLAIIFI WLSGMYFHGA RFPNYEAWLG DPTHIKPSAQ VVWPIVGQEI LNGDVGGGFQ GIQITSGFFQ IWRASGITSE LQLYSTAIGG LIFAALMLFA GWFHYHKAAP KLVWFQDVES MLNHHLAGLL GLGSX // ID AB013665_1 STANDARD; PRT; 282 AA. AC AB013665; DT Tue Jul 21 07:00:00 2009 DE Anthoceros punctatus chloroplast psaB gene for photosystem I P700 OS chloroplast Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT C-terminal not determined FT GENE : psaB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA83441.1 FT PROTEIN_NAME : photosystem I P700 apoprotein A2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 845 FT DIRECTIONS : positive FT EDITING : 44 *(Taa) -> Q(Caa) FT EDITING : 106 *(Tga) -> R(Cga) FT EDITING : 122 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 845 NT; CD 1 atggcatcaa gattcccaaa attcagccag ggtctatctc aagacccgac CD 51 tacccgtcgt atttggttcg gtattgctac cgcacatgac ttcgagagtc CD 101 atgataatat tactgaagag cgtctctatT aaaagatatt tgcttctcat CD 151 ttcggtcaat tagccatcat ttttttatgg acctctggta attcatttca CD 201 tgtcgcttgg cagggtaatt tcgaggcgtg ggtacaagac cctttacatg CD 251 taagaccaat cgctcatgct atttgggatc cccattttgg tgaaccagct CD 301 gtagaagcct ttactTgagg aggagcttta ggtcccgtta atattgctta CD 351 ttctggggtc tatTaatggt ggtatataat tggcttgcgc accattcaag CD 401 atctttatat tggagctctt tttctgttat tccttgctgc tgttttttta CD 451 atagcgggtt ggttacacct acaacctaaa tggaaaccaa gtgtttcatg CD 501 gtttaagaat gctgagtctc gtcccaatca ccacttgtca ggactttttg CD 551 gagtaagttc tttagcctgg gcaggacatt taatacatgt agctatttct CD 601 gaatcgaggg gtgagcatgt aagatgggat aatctattaa ccgcattacc CD 651 acatcctcaa gggttaaaac ctttttttga aggtcaatgg ggtatttatg CD 701 ctgaaaatgc tgattcaagt agtcatttgt tcagtacttc tgaaggagca CD 751 ggtacagcta ttccaacatt cattggcgga ttccatccac aaacccaaag CD 801 tttatggtta actgatattg ctcatcatta tttagctatt gcagt FT EDITED CDNA CD 1 atggcatcaa gattcccaaa attcagccag ggtctatctc aagacccgac CD 51 tacccgtcgt atttggttcg gtattgctac cgcacatgac ttcgagagtc CD 101 atgataatat tactgaagag cgtctctatC aaaagatatt tgcttctcat CD 151 ttcggtcaat tagccatcat ttttttatgg acctctggta attcatttca CD 201 tgtcgcttgg cagggtaatt tcgaggcgtg ggtacaagac cctttacatg CD 251 taagaccaat cgctcatgct atttgggatc cccattttgg tgaaccagct CD 301 gtagaagcct ttactCgagg aggagcttta ggtcccgtta atattgctta CD 351 ttctggggtc tatCaatggt ggtatataat tggcttgcgc accattcaag CD 401 atctttatat tggagctctt tttctgttat tccttgctgc tgttttttta CD 451 atagcgggtt ggttacacct acaacctaaa tggaaaccaa gtgtttcatg CD 501 gtttaagaat gctgagtctc gtcccaatca ccacttgtca ggactttttg CD 551 gagtaagttc tttagcctgg gcaggacatt taatacatgt agctatttct CD 601 gaatcgaggg gtgagcatgt aagatgggat aatctattaa ccgcattacc CD 651 acatcctcaa gggttaaaac ctttttttga aggtcaatgg ggtatttatg CD 701 ctgaaaatgc tgattcaagt agtcatttgt tcagtacttc tgaaggagca CD 751 ggtacagcta ttccaacatt cattggcgga ttccatccac aaacccaaag CD 801 tttatggtta actgatattg ctcatcatta tttagctatt gcagt SQ SEQUENCE 282 AA; MASRFPKFSQ GLSQDPTTRR IWFGIATAHD FESHDNITEE RLYQKIFASH FGQLAIIFLW TSGNSFHVAW QGNFEAWVQD PLHVRPIAHA IWDPHFGEPA VEAFTRGGAL GPVNIAYSGV YQWWYIIGLR TIQDLYIGAL FLLFLAAVFL IAGWLHLQPK WKPSVSWFKN AESRPNHHLS GLFGVSSLAW AGHLIHVAIS ESRGEHVRWD NLLTALPHPQ GLKPFFEGQW GIYAENADSS SHLFSTSEGA GTAIPTFIGG FHPQTQSLWL TDIAHHYLAI AV // ID AB013666_1 STANDARD; PRT; 156 AA. AC AB013666; DT Tue Jul 21 07:00:00 2009 DE Anthoceros punctatus chloroplast psaB gene for photosystem I P700 OS chloroplast Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT N-terminal not determined FT C-terminal not determined FT GENE : psaB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA83442.1 FT PROTEIN_NAME : photosystem I P700 apoprotein A2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 468 FT DIRECTIONS : positive FT EDITING : 21 *(Taa) -> Q(Caa) FT EDITING : 30 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 468 NT; CD 1 ccatactttg ggactctatg tccataatga tgttatgctt gcctttggta CD 51 ctccagaaaa aTaaatctta atcgagcctg tatttgctTa atggatacaa CD 101 tctgcccatg gtaagactct atatgggttt gatctacttc tatcttcagc CD 151 ggataggcca gctttcaatg ctggtcaaag catatggtta cctggttggt CD 201 tagatgctac caataataat agtaattcac tattcttaac tattggtcct CD 251 ggtgactttt tggttcacca tgctattgct ttgggcttgc atacgacaac CD 301 actaatttta gtcaaaggtg ctttggatgc acggggattc aagctaatgc CD 351 ccgataaaaa agaatttggt tatagttttc cttgtgatgg tccaggaaga CD 401 ggtggtactt gtgatatttc agcctgggat gcttttnatt tagctgtttc CD 451 ttggatntta aacacgat FT EDITED CDNA CD 1 ccatactttg ggactctatg tccataatga tgttatgctt gcctttggta CD 51 ctccagaaaa aCaaatctta atcgagcctg tatttgctCa atggatacaa CD 101 tctgcccatg gtaagactct atatgggttt gatctacttc tatcttcagc CD 151 ggataggcca gctttcaatg ctggtcaaag catatggtta cctggttggt CD 201 tagatgctac caataataat agtaattcac tattcttaac tattggtcct CD 251 ggtgactttt tggttcacca tgctattgct ttgggcttgc atacgacaac CD 301 actaatttta gtcaaaggtg ctttggatgc acggggattc aagctaatgc CD 351 ccgataaaaa agaatttggt tatagttttc cttgtgatgg tccaggaaga CD 401 ggtggtactt gtgatatttc agcctgggat gcttttnatt tagctgtttc CD 451 ttggatntta aacacgat SQ SEQUENCE 156 AA; HTLGLYVHND VMLAFGTPEK QILIEPVFAQ WIQSAHGKTL YGFDLLLSSA DRPAFNAGQS IWLPGWLDAT NNNSNSLFLT IGPGDFLVHH AIALGLHTTT LILVKGALDA RGFKLMPDKK EFGYSFPCDG PGRGGTCDIS AWDAFXLAVS WXLNTX // ID AB013667_1 STANDARD; PRT; 315 AA. AC AB013667; DT Tue Jul 21 07:00:00 2009 DE Anthoceros punctatus chloroplast psbD gene for photosystem II OS chloroplast Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT N-terminal not determined FT C-terminal not determined FT GENE : psbD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA83443.1 FT PROTEIN_NAME : photosystem II protein D2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 945 FT DIRECTIONS : positive FT EDITING : 106 *(Taa) -> Q(Caa) FT EDITING : 141 *(Tag) -> Q(Cag) FT EDITING : 157 *(Tga) -> R(Cga) FT EDITING : 309 *(Taa) -> Q(Caa) FT CODON_START : 3 CL CDNALEN 945 NT; CD 1 agagagatcg cttcgtattt gtaggttggt ccggcttatt gctgtttcct CD 51 tgtgcttatt ttgctttagg tggatggttt acaggtacga ctttcgtaag CD 101 ttcacggtat actcatggat tagctagttc ttacttagag ggctgtaatt CD 151 tcttgaccgc cgcggtttct acctctgtta atagtttagc acatttttta CD 201 ttgcttctat ggggtcctga agcacaagga gatttcactt gttggtgcca CD 251 actaggcggt ctatggacct ttgtggctct ccatggtgct tttggtttaa CD 301 taggcttcat gttacgcTaa ttcgaactag ctagatctgt gcaattacgt CD 351 ctttataatg ccattgcatt ttctggtcca attgcagttt ttgtttccgt CD 401 attcttgatc tatccattgg gtTagtctgg ttggtttttc gcactcagtt CD 451 tcggtgtagc agctatctct Tgattcattc ttttctttta aggttttcat CD 501 aactggactt taaacttgtt tcatatgatg ggagttgctg gagttttagg CD 551 tgttgcttta ttatgtgtta tttatggggc tacagtggag aatactttgt CD 601 ttgaggatgg tgatggtgca aatacattcc gtgctttcaa cccaactcaa CD 651 tctgaagaaa cttattctat ggtaactgct aatagatttt ggtctcagat CD 701 cttcggtgtt gctttcccta acaagcgttg gttacacttt ttcatgttat CD 751 tcgtaccagt aactggttta tggatgagtg ctattggagt tgttggttta CD 801 gccttaaact taagagcata tgattttgta tctcaagaga ttcgtgcagc CD 851 ggaggatcct gaatctgaaa ctttctacac taaaaatatt cttctgaatg CD 901 aaggtattcg tgcttggatg gcggctTaag atcagcctca tgaaa FT EDITED CDNA CD 1 agagagatcg cttcgtattt gtaggttggt ccggcttatt gctgtttcct CD 51 tgtgcttatt ttgctttagg tggatggttt acaggtacga ctttcgtaag CD 101 ttcacggtat actcatggat tagctagttc ttacttagag ggctgtaatt CD 151 tcttgaccgc cgcggtttct acctctgtta atagtttagc acatttttta CD 201 ttgcttctat ggggtcctga agcacaagga gatttcactt gttggtgcca CD 251 actaggcggt ctatggacct ttgtggctct ccatggtgct tttggtttaa CD 301 taggcttcat gttacgcCaa ttcgaactag ctagatctgt gcaattacgt CD 351 ctttataatg ccattgcatt ttctggtcca attgcagttt ttgtttccgt CD 401 attcttgatc tatccattgg gtCagtctgg ttggtttttc gcactcagtt CD 451 tcggtgtagc agctatctct Cgattcattc ttttctttta aggttttcat CD 501 aactggactt taaacttgtt tcatatgatg ggagttgctg gagttttagg CD 551 tgttgcttta ttatgtgtta tttatggggc tacagtggag aatactttgt CD 601 ttgaggatgg tgatggtgca aatacattcc gtgctttcaa cccaactcaa CD 651 tctgaagaaa cttattctat ggtaactgct aatagatttt ggtctcagat CD 701 cttcggtgtt gctttcccta acaagcgttg gttacacttt ttcatgttat CD 751 tcgtaccagt aactggttta tggatgagtg ctattggagt tgttggttta CD 801 gccttaaact taagagcata tgattttgta tctcaagaga ttcgtgcagc CD 851 ggaggatcct gaatctgaaa ctttctacac taaaaatatt cttctgaatg CD 901 aaggtattcg tgcttggatg gcggctCaag atcagcctca tgaaa SQ SEQUENCE 315 AA; RDRFVFVGWS GLLLFPCAYF ALGGWFTGTT FVSSRYTHGL ASSYLEGCNF LTAAVSTSVN SLAHFLLLLW GPEAQGDFTC WCQLGGLWTF VALHGAFGLI GFMLRQFELA RSVQLRLYNA IAFSGPIAVF VSVFLIYPLG QSGWFFALSF GVAAISRFIL FF*GFHNWTL NLFHMMGVAG VLGVALLCVI YGATVENTLF EDGDGANTFR AFNPTQSEET YSMVTANRFW SQIFGVAFPN KRWLHFFMLF VPVTGLWMSA IGVVGLALNL RAYDFVSQEI RAAEDPESET FYTKNILLNE GIRAWMAAQD QPHEX // ID AB013668_1 STANDARD; PRT; 435 AA. AC AB013668; DT Tue Jul 21 07:00:00 2009 DE Anthoceros punctatus chloroplast rbcL gene for ribulose OS chloroplast Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT N-terminal not determined FT C-terminal not determined FT GENE : rbcL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA83444.1 FT PROTEIN_NAME : ribulose-1,5-bisphosphate carboxylase/oxygenase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 1303 FT DIRECTIONS : positive FT EDITING : 27 *(Tga) -> R(Cga) FT EDITING : 31 *(Taa) -> Q(Caa) FT EDITING : 407 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 1303 NT; CD 1 gctggtgtta aagattatag attaacccat tatacccctg attacgagac CD 51 caaggatact gatattttgg cagcgtctTg aatgactcct Taaccagggg CD 101 tgccacctga agaagcagga gccgcagtag ctgctgaatc ttcaactggt CD 151 acatggacta ctgtttggac cgatggactt accagccttg accgttacaa CD 201 aggtcgatgc tacgacattg aacctgttgc tggagaggaa aatcaatata CD 251 ttgcttatgc tgtttatttt ttagatttgt ttgaggaggg ttctgttacc CD 301 aacatgttca cttccattgt aggtaatgtt tttggattta aagctttacg CD 351 agcttcacgt ctagaagatt cacgaattcc acttgcttat tccaaaatct CD 401 ttcaaggtcc acctcatggt attcaagttg aaagggataa atcgaataaa CD 451 tatggtcgtc ctttattagg atgtaccatt aaaccaaagt taggtttatc CD 501 tgccaaaaac tatggtagag ctgtatatga atgtcttcgt ggtggacttg CD 551 atttcaccaa agatgacgaa aatgttaatt ctcaaccttt tatgcgttgg CD 601 agagatcgtt ttctattggt agcagaagct atttctaaat ctcaagctga CD 651 aacaggagag attaaagggc attacttaaa tgccactgca ggtacatgtg CD 701 aggaaatgat gaaaagggca caatttgcta gagaattagg aatgcctatc CD 751 gtaatgcatg attatttgac aggaggtttt attgtaaata tgattctggc CD 801 tcattattgt agagacaatg gtttacttct tcatattcat cgtgctatgt CD 851 atgtagttac tgacagacaa ggaaatcatg gtattcactt tcgtgtatca CD 901 gctaaagcat cacgtatgtc cgggggagat catattcatc caggtatagt CD 951 agtaggtaaa ttagagggag aatgtgaagt aactttaggt tttgtggatt CD 1001 taccttgtga cgattatatt gaaaaagata gaagttgtgg gatatatttt CD 1051 actcaagact gggtctctat gcctggtgtt ttgcctgtgg cctcaggtgg CD 1101 tattcatgtt tggcatatgt tagctttaac tgagattttc ggagatgatt CD 1151 ccgtactaca gtttggcggg ggaactctag gacacccttg gggaaatgca CD 1201 cctggtgcag tagctaatTg agttgcttta gaagcttgtg tgcaagctcg CD 1251 taatgaagga cgtgatcttg cttgcgaggg taatgatatt atccgtgaag CD 1301 cta FT EDITED CDNA CD 1 gctggtgtta aagattatag attaacccat tatacccctg attacgagac CD 51 caaggatact gatattttgg cagcgtctCg aatgactcct Caaccagggg CD 101 tgccacctga agaagcagga gccgcagtag ctgctgaatc ttcaactggt CD 151 acatggacta ctgtttggac cgatggactt accagccttg accgttacaa CD 201 aggtcgatgc tacgacattg aacctgttgc tggagaggaa aatcaatata CD 251 ttgcttatgc tgtttatttt ttagatttgt ttgaggaggg ttctgttacc CD 301 aacatgttca cttccattgt aggtaatgtt tttggattta aagctttacg CD 351 agcttcacgt ctagaagatt cacgaattcc acttgcttat tccaaaatct CD 401 ttcaaggtcc acctcatggt attcaagttg aaagggataa atcgaataaa CD 451 tatggtcgtc ctttattagg atgtaccatt aaaccaaagt taggtttatc CD 501 tgccaaaaac tatggtagag ctgtatatga atgtcttcgt ggtggacttg CD 551 atttcaccaa agatgacgaa aatgttaatt ctcaaccttt tatgcgttgg CD 601 agagatcgtt ttctattggt agcagaagct atttctaaat ctcaagctga CD 651 aacaggagag attaaagggc attacttaaa tgccactgca ggtacatgtg CD 701 aggaaatgat gaaaagggca caatttgcta gagaattagg aatgcctatc CD 751 gtaatgcatg attatttgac aggaggtttt attgtaaata tgattctggc CD 801 tcattattgt agagacaatg gtttacttct tcatattcat cgtgctatgt CD 851 atgtagttac tgacagacaa ggaaatcatg gtattcactt tcgtgtatca CD 901 gctaaagcat cacgtatgtc cgggggagat catattcatc caggtatagt CD 951 agtaggtaaa ttagagggag aatgtgaagt aactttaggt tttgtggatt CD 1001 taccttgtga cgattatatt gaaaaagata gaagttgtgg gatatatttt CD 1051 actcaagact gggtctctat gcctggtgtt ttgcctgtgg cctcaggtgg CD 1101 tattcatgtt tggcatatgt tagctttaac tgagattttc ggagatgatt CD 1151 ccgtactaca gtttggcggg ggaactctag gacacccttg gggaaatgca CD 1201 cctggtgcag tagctaatCg agttgcttta gaagcttgtg tgcaagctcg CD 1251 taatgaagga cgtgatcttg cttgcgaggg taatgatatt atccgtgaag CD 1301 cta SQ SEQUENCE 435 AA; AGVKDYRLTH YTPDYETKDT DILAASRMTP QPGVPPEEAG AAVAAESSTG TWTTVWTDGL TSLDRYKGRC YDIEPVAGEE NQYIAYAVYF LDLFEEGSVT NMFTSIVGNV FGFKALRASR LEDSRIPLAY SKIFQGPPHG IQVERDKSNK YGRPLLGCTI KPKLGLSAKN YGRAVYECLR GGLDFTKDDE NVNSQPFMRW RDRFLLVAEA ISKSQAETGE IKGHYLNATA GTCEEMMKRA QFARELGMPI VMHDYLTGGF IVNMILAHYC RDNGLLLHIH RAMYVVTDRQ GNHGIHFRVS AKASRMSGGD HIHPGIVVGK LEGECEVTLG FVDLPCDDYI EKDRSCGIYF TQDWVSMPGV LPVASGGIHV WHMLALTEIF GDDSVLQFGG GTLGHPWGNA PGAVANRVAL EACVQARNEG RDLACEGNDI IREAX // ID AB013669_1 STANDARD; PRT; 328 AA. AC AB013669; DT Tue Jul 21 07:00:00 2009 DE Anthoceros punctatus chloroplast rpoC2 gene for DNA-directed RNA OS chloroplast Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoC2 FT NOTE : start codon is not identified FT LOCUS_TAG : FT PROTEIN_ID : BAA83445.1 FT PROTEIN_NAME : DNA-directed RNA polymerase beta'-2 chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 940 - 1922 FT DIRECTIONS : positive FT EDITING : 48 *(Taa) -> Q(Caa) FT EDITING : 73 *(Taa) -> Q(Caa) FT EDITING : 113 *(Taa) -> Q(Caa) FT EDITING : 137 *(Tga) -> R(Cga) FT EDITING : 142 *(Taa) -> Q(Caa) FT EDITING : 145 *(Taa) -> Q(Caa) FT EDITING : 157 *(Tag) -> Q(Cag) FT EDITING : 195 *(Tga) -> R(Cga) FT EDITING : 211 *(Taa) -> Q(Caa) FT EDITING : 224 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 983 NT; CD 1 gtggcagaat cagctaaatt gctattctat aataaagtaa tagatggaac CD 51 tgcgataaaa caatttattg gcagattagt agctcacttt ggaattacat CD 101 atacagctca cattttggat caacctaaaa ctctgggttt tTaacaagct CD 151 acttatgccg ttactttatt aggcattgac gatctcttaa cagtactgtc CD 201 aaagggatgg ctcattTaag atgcggaaca tcatagttat actttggaga CD 251 agcatcatcg ctatgggaat gtacatgctg cggaaaaatt acgtcaactc CD 301 attgaaacat ggtatgctac gagtgagtat tcaaaaTaag aaatgaatcc CD 351 taatttcaga atgactgatc ccttaaatcc ggtacatatg atgtcttttt CD 401 caggagctTg aggaagtgca tcaTaagttt atTaattagt aggtatgaga CD 451 ggattagtgt cagattttTa gggacaaatt attgatttac ttattaagag CD 501 taatttccgc gagggattat ctttgaccga atatattatt tcttgttacg CD 551 gtgcttgtaa aggagttgtt gatactgtcg tgTgaatatt agatgctgga CD 601 taccttacat gcagacttgt tgaagtggtt Taacatattg tagtacgtaa CD 651 aacagattgt aatacttttT gaggtatttc tttgaattct accgaagata CD 701 agaagaaaaa tttacaaata tttactcagc aaaaactagt gggtcgtgta CD 751 ctagcagata atttatatat aaatgcaaga tgtcttgcta tatgtaatca CD 801 agatattaat actaatttta ttgaaaaatc aataactctt aaaacaccat CD 851 caatttcaat acgatctccc ttgacttgca aaagtatgct ttggatttgt CD 901 caattatgct atggatggag tcttactcac tacggtgatt tagtagaatt CD 951 gggagaagct gtgggtatta ttgnaggcan tct FT EDITED CDNA CD 1 gtggcagaat cagctaaatt gctattctat aataaagtaa tagatggaac CD 51 tgcgataaaa caatttattg gcagattagt agctcacttt ggaattacat CD 101 atacagctca cattttggat caacctaaaa ctctgggttt tCaacaagct CD 151 acttatgccg ttactttatt aggcattgac gatctcttaa cagtactgtc CD 201 aaagggatgg ctcattCaag atgcggaaca tcatagttat actttggaga CD 251 agcatcatcg ctatgggaat gtacatgctg cggaaaaatt acgtcaactc CD 301 attgaaacat ggtatgctac gagtgagtat tcaaaaCaag aaatgaatcc CD 351 taatttcaga atgactgatc ccttaaatcc ggtacatatg atgtcttttt CD 401 caggagctCg aggaagtgca tcaCaagttt atCaattagt aggtatgaga CD 451 ggattagtgt cagattttCa gggacaaatt attgatttac ttattaagag CD 501 taatttccgc gagggattat ctttgaccga atatattatt tcttgttacg CD 551 gtgcttgtaa aggagttgtt gatactgtcg tgCgaatatt agatgctgga CD 601 taccttacat gcagacttgt tgaagtggtt Caacatattg tagtacgtaa CD 651 aacagattgt aatacttttC gaggtatttc tttgaattct accgaagata CD 701 agaagaaaaa tttacaaata tttactcagc aaaaactagt gggtcgtgta CD 751 ctagcagata atttatatat aaatgcaaga tgtcttgcta tatgtaatca CD 801 agatattaat actaatttta ttgaaaaatc aataactctt aaaacaccat CD 851 caatttcaat acgatctccc ttgacttgca aaagtatgct ttggatttgt CD 901 caattatgct atggatggag tcttactcac tacggtgatt tagtagaatt CD 951 gggagaagct gtgggtatta ttgnaggcan tct SQ SEQUENCE 328 AA; VAESAKLLFY NKVIDGTAIK QFIGRLVAHF GITYTAHILD QPKTLGFQQA TYAVTLLGID DLLTVLSKGW LIQDAEHHSY TLEKHHRYGN VHAAEKLRQL IETWYATSEY SKQEMNPNFR MTDPLNPVHM MSFSGARGSA SQVYQLVGMR GLVSDFQGQI IDLLIKSNFR EGLSLTEYII SCYGACKGVV DTVVRILDAG YLTCRLVEVV QHIVVRKTDC NTFRGISLNS TEDKKKNLQI FTQQKLVGRV LADNLYINAR CLAICNQDIN TNFIEKSITL KTPSISIRSP LTCKSMLWIC QLCYGWSLTH YGDLVELGEA VGIIXGXL // ID AB013683_1 STANDARD; PRT; 318 AA. AC AB013683; DT Tue Jul 21 07:00:00 2009 DE Adiantum capillus-veneris chloroplast rpoC2 gene for DNA-directed OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Mol. Biol. Evol. 16 (8), 1027-1036 (1999) RL PUBMED 10474899 FT C-terminal not determined FT GENE : rpoC2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA83459.1 FT PROTEIN_NAME : DNA-directed RNA polymerase beta'-2 chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1036 - 1988 FT DIRECTIONS : positive FT EDITING : 78 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 953 NT; CD 1 atgatggatc gaaatgaatt acctttctgc aacaagacga tcgatagggc CD 51 tgcgatgaag agactcatcg gcaagttagt tgtttgtttc ggaattgcgt CD 101 ctacaacaaa tatctcagat caagtgaaag ttttgggttt tcagcaagct CD 151 acagaagcat ctatctcatc gggtattgac gacctttcag cagtaccaac CD 201 cagaggttgg cttgtacgag acgcggagaa aTaaggttac gtctcggagg CD 251 ggcattaccg ctgcggaagt ctgcatgcca tagaaaagtt gcgtcaatca CD 301 attgaagcct ggtatgccac aagtgaatgt ttgaaacgag aaatgagtcc CD 351 aagtttcaag atgattgatc ctttgaatcc cgttcacatg atgtctgttt CD 401 caggagcccg agggaccatc tcccaggtcc accaattgct tggcatgagg CD 451 ggattaatgg cagatcctcg aggtcaggta attgacctac ctatccgaag CD 501 aaatctgcgc gaaggtttat ccctgacaga atatattatt tctcgctacg CD 551 gtgctcgcaa aggggttgtg gataccgccg tgcgaacttc agatgccgga CD 601 tacctaacac gtagacttgt cgaagttgtt caacatattg ctgtacgaag CD 651 aagggattgt gaaactccta gaagtctcgc ttttttgact tcaaatactg CD 701 gcgaacgaag acgaggattt cttggcacga tgccgcatca gggattggtt CD 751 ggacgtgtgt tggcggatca tgtttactgg gatgttagat gtattgccac CD 801 ccgtaaccaa gatattagcg acggattggc tagtaacttg atggcgtcct CD 851 cgcagccaat acatgtgaga tctcctttga catgcaaaag cattttccgg CD 901 atttgtcagt tctgctacgg ttggagcctt gcccattgca atttagtaga CD 951 att FT EDITED CDNA CD 1 atgatggatc gaaatgaatt acctttctgc aacaagacga tcgatagggc CD 51 tgcgatgaag agactcatcg gcaagttagt tgtttgtttc ggaattgcgt CD 101 ctacaacaaa tatctcagat caagtgaaag ttttgggttt tcagcaagct CD 151 acagaagcat ctatctcatc gggtattgac gacctttcag cagtaccaac CD 201 cagaggttgg cttgtacgag acgcggagaa aCaaggttac gtctcggagg CD 251 ggcattaccg ctgcggaagt ctgcatgcca tagaaaagtt gcgtcaatca CD 301 attgaagcct ggtatgccac aagtgaatgt ttgaaacgag aaatgagtcc CD 351 aagtttcaag atgattgatc ctttgaatcc cgttcacatg atgtctgttt CD 401 caggagcccg agggaccatc tcccaggtcc accaattgct tggcatgagg CD 451 ggattaatgg cagatcctcg aggtcaggta attgacctac ctatccgaag CD 501 aaatctgcgc gaaggtttat ccctgacaga atatattatt tctcgctacg CD 551 gtgctcgcaa aggggttgtg gataccgccg tgcgaacttc agatgccgga CD 601 tacctaacac gtagacttgt cgaagttgtt caacatattg ctgtacgaag CD 651 aagggattgt gaaactccta gaagtctcgc ttttttgact tcaaatactg CD 701 gcgaacgaag acgaggattt cttggcacga tgccgcatca gggattggtt CD 751 ggacgtgtgt tggcggatca tgtttactgg gatgttagat gtattgccac CD 801 ccgtaaccaa gatattagcg acggattggc tagtaacttg atggcgtcct CD 851 cgcagccaat acatgtgaga tctcctttga catgcaaaag cattttccgg CD 901 atttgtcagt tctgctacgg ttggagcctt gcccattgca atttagtaga CD 951 att SQ SEQUENCE 318 AA; MMDRNELPFC NKTIDRAAMK RLIGKLVVCF GIASTTNISD QVKVLGFQQA TEASISSGID DLSAVPTRGW LVRDAEKQGY VSEGHYRCGS LHAIEKLRQS IEAWYATSEC LKREMSPSFK MIDPLNPVHM MSVSGARGTI SQVHQLLGMR GLMADPRGQV IDLPIRRNLR EGLSLTEYII SRYGARKGVV DTAVRTSDAG YLTRRLVEVV QHIAVRRRDC ETPRSLAFLT SNTGERRRGF LGTMPHQGLV GRVLADHVYW DVRCIATRNQ DISDGLASNL MASSQPIHVR SPLTCKSIFR ICQFCYGWSL AHCNLVEX // ID AB015175_1 STANDARD; PRT; 258 AA. AC AB015175; DT Tue Jul 21 07:00:00 2009 DE Beta vulgaris mitochondrial atp6 gene for F0-ATPase subunit 6, OS mitochondrion Beta vulgaris OC Beta vulgaris RN [1] RL J. Plant Physiol. 155, 656-660 (1999) FT Full length CDS FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA36470.2 FT PROTEIN_NAME : F0-ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 86 - 859 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 31 P(Cca) -> S(Tca) FT EDITING : 57 S(tCa) -> L(tTa) FT EDITING : 106 R(Cgt) -> C(Tgt) FT EDITING : 152 S(tCa) -> L(tTa) FT EDITING : 172 P(Cct) -> S(Tct) FT EDITING : 173 H(Cat) -> Y(Tat) FT EDITING : 180 S(tCa) -> L(tTa) FT EDITING : 194 S(tCa) -> L(tTa) FT EDITING : 240 H(Cat) -> Y(Tat) FT EDITING : 254 T(aCa) -> I(aTa) FT EDITING : 258 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 774 NT; CD 1 aCgattacgc ccaacagccc acttgagcaa ttttccattc tcccattgat CD 51 tcctatgaaa ataggaaact tgtatttctc attcacaaat Ccatctttgt CD 101 ttatgctgct aactctcagt ttggtcctac ttctgcttca ttttgttact CD 151 aaaaagggag gaggaaactC agtaccaaat gtttggcaat ccttggtaga CD 201 gcttatttat gatttcgtgc tgaacctggt aaacgaacaa ataggtggtc CD 251 tttccggaaa tgttaaacaa aagtttttcc cttgcatctt ggtcactttt CD 301 acttttttgt tatttCgtaa tctccagggt atgataccct atagctttac CD 351 agttacaagt cattttctca ttactttggg tctttcattt tccattttta CD 401 ttggcattac tatagtggga tttcaaagaa atgggcttca ttttttaagc CD 451 ttctCattac ctgcaggagt cccgctgccg ttagcacctt ttttagtact CD 501 ccttgagcta atcCctCatt gttttcgcgc attaagctCa ggaatacgtt CD 551 tatttgctaa tatgatggcc ggtcatagtt Cagtaaagat tttaagtggg CD 601 ttcgcttgga ctatgctatg tatgaatgat cttttatatt tcataggaga CD 651 tcttggtcct ttatttatag ttcttgcatt aaccggtctt gaattaggtg CD 701 tagctatatt acaagctCat gtttttacga tcttaatctg tatttacttg CD 751 aatgatgcta Caaatctcca tCaa FT EDITED CDNA CD 1 aTgattacgc ccaacagccc acttgagcaa ttttccattc tcccattgat CD 51 tcctatgaaa ataggaaact tgtatttctc attcacaaat Tcatctttgt CD 101 ttatgctgct aactctcagt ttggtcctac ttctgcttca ttttgttact CD 151 aaaaagggag gaggaaactT agtaccaaat gtttggcaat ccttggtaga CD 201 gcttatttat gatttcgtgc tgaacctggt aaacgaacaa ataggtggtc CD 251 tttccggaaa tgttaaacaa aagtttttcc cttgcatctt ggtcactttt CD 301 acttttttgt tatttTgtaa tctccagggt atgataccct atagctttac CD 351 agttacaagt cattttctca ttactttggg tctttcattt tccattttta CD 401 ttggcattac tatagtggga tttcaaagaa atgggcttca ttttttaagc CD 451 ttctTattac ctgcaggagt cccgctgccg ttagcacctt ttttagtact CD 501 ccttgagcta atcTctTatt gttttcgcgc attaagctTa ggaatacgtt CD 551 tatttgctaa tatgatggcc ggtcatagtt Tagtaaagat tttaagtggg CD 601 ttcgcttgga ctatgctatg tatgaatgat cttttatatt tcataggaga CD 651 tcttggtcct ttatttatag ttcttgcatt aaccggtctt gaattaggtg CD 701 tagctatatt acaagctTat gtttttacga tcttaatctg tatttacttg CD 751 aatgatgcta Taaatctcca tTaa SQ SEQUENCE 258 AA; MITPNSPLEQ FSILPLIPMK IGNLYFSFTN SSLFMLLTLS LVLLLLHFVT KKGGGNLVPN VWQSLVELIY DFVLNLVNEQ IGGLSGNVKQ KFFPCILVTF TFLLFCNLQG MIPYSFTVTS HFLITLGLSF SIFIGITIVG FQRNGLHFLS FLLPAGVPLP LAPFLVLLEL ISYCFRALSL GIRLFANMMA GHSLVKILSG FAWTMLCMND LLYFIGDLGP LFIVLALTGL ELGVAILQAY VFTILICIYL NDAINLH* // ID AB015176_1 STANDARD; PRT; 640 AA. AC AB015176; DT Tue Jul 21 07:00:00 2009 DE Beta vulgaris mitochondrial atp6 gene for F0-ATPase subunit 6, OS mitochondrion Beta vulgaris OC Beta vulgaris RN [1] RL J. Plant Physiol. 155, 656-660 (1999) FT Full length CDS FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA36471.2 FT PROTEIN_NAME : F0-ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 112 - 2031 FT DIRECTIONS : positive FT EDITING : 2 I(atC) -> I(atT) FT EDITING : 264 I(atC) -> I(atT) FT EDITING : 413 P(Cca) -> S(Tca) FT EDITING : 439 S(tCa) -> L(tTa) FT EDITING : 488 R(Cgt) -> C(Tgt) FT EDITING : 534 S(tCa) -> L(tTa) FT EDITING : 554 P(Cct) -> S(Tct) FT EDITING : 555 H(Cat) -> Y(Tat) FT EDITING : 562 S(tCa) -> L(tTa) FT EDITING : 576 S(tCa) -> L(tTa) FT EDITING : 622 H(Cat) -> Y(Tat) FT EDITING : 636 T(aCa) -> I(aTa) FT EDITING : 640 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1920 NT; CD 1 atgatCacta agtctaagaa ggagatgatt gcttatgcaa agcagataat CD 51 tacaaatgtc cctcgaccta catggcgagt attattcgga ctcagcgtgc CD 101 tcttcaccct cttttggtcc gggagaagcg gaatggttga aacgaaatta CD 151 attctccaag cactctttgg catagcaaca gcggctgctt ttttgttttt CD 201 ttgttattcc cattcccgga cgcgggagca cttcctctat acaattctaa CD 251 taacgctttc tttggcttta ctcttcaaaa agggggcttt ccctcttttt CD 301 gaattcgccc ctttggctat attgatcttt tcggtttgct tctttcccaa CD 351 aaatggacga ttacggtatt cgctagagaa ctgttctttt tttctcctat CD 401 tactttgggg ggattaccgg cttttggata ctccgtggtg tgaatgggta CD 451 ctctatgttt gtggcctctt aactttattc acgcttcttc aagcgatggt CD 501 ccatcgaaag gaggaagggg tcggcaagtt tcttctaccg gctgccttcc CD 551 taattagtga cctcgtgctc ctttggcttc actcgggggc gattcagaat CD 601 ccgctgggaa aggcggccct aacgggcgcc gcagtcctaa tactctttag CD 651 ccaagcctcc gccgagtcca caaggcagcg ggagcttgca aatggggcgt CD 701 atctcatgtg tatccctcct atactatata tcataggagg ggccacggat CD 751 tggccccgat tcgtaaacga actcaccttt tttattctta tCctctggct CD 801 agtcttagtt ttttgggttg ttactttgga ggacgaaaaa gagcagaagg CD 851 atctgctccc gctcctatct gcgatcttct ccgctttggc gtcgccgagt CD 901 tacggccccg acgtctgggt aaaagagtgg ctcgccgcct tttccttaac CD 951 cattggggcg gtttttttgt ttgagaaggt aggctaccgc aaagataccc CD 1001 ttccagaaac gtcccgtact tgggaacctt ggttttgctt ttttgctgtt CD 1051 ctttcttttg gtgttgcact tagttttttt catgcatcac ccgccctagg CD 1101 ggtgggaact gaaagtgaag cttttcacga tgcgattaat ccagcagcgg CD 1151 gacggatccc cagcccccta gagcaatttt ccattctccc attgattcct CD 1201 atgaaaatag gaaacttgta tttctcattc acaaatCcat ctttgtttat CD 1251 gctgctaact ctcagtttgg tcctacttct gcttcatttt gttactaaaa CD 1301 agggaggagg aaactCagta ccaaatgttt ggcaatcctt ggtagagctt CD 1351 atttatgatt tcgtgctgaa cctggtaaac gaacaaatag gtggtctttc CD 1401 cggaaatgtt aaacaaaagt ttttcccttg catcttggtc acttttactt CD 1451 ttttgttatt tCgtaatctc cagggtatga taccctatag ctttacagtt CD 1501 acaagtcatt ttctcattac tttgggtctt tcattttcca tttttattgg CD 1551 cattactata gtgggatttc aaagaaatgg gcttcatttt ttaagcttct CD 1601 Cattacctgc aggagtcccg ctgccgttag cacccttttt agtactcctt CD 1651 gagctaatcC ctCattgttt tcgcgcatta agctCaggaa tacgtttatt CD 1701 tgctaatatg atggccggtc atagttCagt aaagatttta agtgggttcg CD 1751 cttggactat gctatgtatg aatgatcttt tatatttcat aggagatctt CD 1801 ggtcctttat ttatagttct tgcattaacc ggtcttgaat taggtgtagc CD 1851 tatattacaa gctCatgttt ttacgatctt aatctgtatt tacttgaatg CD 1901 atgctaCaaa tctccatCaa FT EDITED CDNA CD 1 atgatTacta agtctaagaa ggagatgatt gcttatgcaa agcagataat CD 51 tacaaatgtc cctcgaccta catggcgagt attattcgga ctcagcgtgc CD 101 tcttcaccct cttttggtcc gggagaagcg gaatggttga aacgaaatta CD 151 attctccaag cactctttgg catagcaaca gcggctgctt ttttgttttt CD 201 ttgttattcc cattcccgga cgcgggagca cttcctctat acaattctaa CD 251 taacgctttc tttggcttta ctcttcaaaa agggggcttt ccctcttttt CD 301 gaattcgccc ctttggctat attgatcttt tcggtttgct tctttcccaa CD 351 aaatggacga ttacggtatt cgctagagaa ctgttctttt tttctcctat CD 401 tactttgggg ggattaccgg cttttggata ctccgtggtg tgaatgggta CD 451 ctctatgttt gtggcctctt aactttattc acgcttcttc aagcgatggt CD 501 ccatcgaaag gaggaagggg tcggcaagtt tcttctaccg gctgccttcc CD 551 taattagtga cctcgtgctc ctttggcttc actcgggggc gattcagaat CD 601 ccgctgggaa aggcggccct aacgggcgcc gcagtcctaa tactctttag CD 651 ccaagcctcc gccgagtcca caaggcagcg ggagcttgca aatggggcgt CD 701 atctcatgtg tatccctcct atactatata tcataggagg ggccacggat CD 751 tggccccgat tcgtaaacga actcaccttt tttattctta tTctctggct CD 801 agtcttagtt ttttgggttg ttactttgga ggacgaaaaa gagcagaagg CD 851 atctgctccc gctcctatct gcgatcttct ccgctttggc gtcgccgagt CD 901 tacggccccg acgtctgggt aaaagagtgg ctcgccgcct tttccttaac CD 951 cattggggcg gtttttttgt ttgagaaggt aggctaccgc aaagataccc CD 1001 ttccagaaac gtcccgtact tgggaacctt ggttttgctt ttttgctgtt CD 1051 ctttcttttg gtgttgcact tagttttttt catgcatcac ccgccctagg CD 1101 ggtgggaact gaaagtgaag cttttcacga tgcgattaat ccagcagcgg CD 1151 gacggatccc cagcccccta gagcaatttt ccattctccc attgattcct CD 1201 atgaaaatag gaaacttgta tttctcattc acaaatTcat ctttgtttat CD 1251 gctgctaact ctcagtttgg tcctacttct gcttcatttt gttactaaaa CD 1301 agggaggagg aaactTagta ccaaatgttt ggcaatcctt ggtagagctt CD 1351 atttatgatt tcgtgctgaa cctggtaaac gaacaaatag gtggtctttc CD 1401 cggaaatgtt aaacaaaagt ttttcccttg catcttggtc acttttactt CD 1451 ttttgttatt tTgtaatctc cagggtatga taccctatag ctttacagtt CD 1501 acaagtcatt ttctcattac tttgggtctt tcattttcca tttttattgg CD 1551 cattactata gtgggatttc aaagaaatgg gcttcatttt ttaagcttct CD 1601 Tattacctgc aggagtcccg ctgccgttag cacccttttt agtactcctt CD 1651 gagctaatcT ctTattgttt tcgcgcatta agctTaggaa tacgtttatt CD 1701 tgctaatatg atggccggtc atagttTagt aaagatttta agtgggttcg CD 1751 cttggactat gctatgtatg aatgatcttt tatatttcat aggagatctt CD 1801 ggtcctttat ttatagttct tgcattaacc ggtcttgaat taggtgtagc CD 1851 tatattacaa gctTatgttt ttacgatctt aatctgtatt tacttgaatg CD 1901 atgctaTaaa tctccatTaa SQ SEQUENCE 640 AA; MITKSKKEMI AYAKQIITNV PRPTWRVLFG LSVLFTLFWS GRSGMVETKL ILQALFGIAT AAAFLFFCYS HSRTREHFLY TILITLSLAL LFKKGAFPLF EFAPLAILIF SVCFFPKNGR LRYSLENCSF FLLLLWGDYR LLDTPWCEWV LYVCGLLTLF TLLQAMVHRK EEGVGKFLLP AAFLISDLVL LWLHSGAIQN PLGKAALTGA AVLILFSQAS AESTRQRELA NGAYLMCIPP ILYIIGGATD WPRFVNELTF FILILWLVLV FWVVTLEDEK EQKDLLPLLS AIFSALASPS YGPDVWVKEW LAAFSLTIGA VFLFEKVGYR KDTLPETSRT WEPWFCFFAV LSFGVALSFF HASPALGVGT ESEAFHDAIN PAAGRIPSPL EQFSILPLIP MKIGNLYFSF TNSSLFMLLT LSLVLLLLHF VTKKGGGNLV PNVWQSLVEL IYDFVLNLVN EQIGGLSGNV KQKFFPCILV TFTFLLFCNL QGMIPYSFTV TSHFLITLGL SFSIFIGITI VGFQRNGLHF LSFLLPAGVP LPLAPFLVLL ELISYCFRAL SLGIRLFANM MAGHSLVKIL SGFAWTMLCM NDLLYFIGDL GPLFIVLALT GLELGVAILQ AYVFTILICI YLNDAINLH* // ID AB015177_1 STANDARD; PRT; 642 AA. AC AB015177; DT Tue Jul 21 07:00:00 2009 DE Beta vulgaris mitochondrial atp6 gene for F0-ATPase subunit 6, OS mitochondrion Beta vulgaris OC Beta vulgaris RN [1] RL J. Plant Physiol. 155, 656-660 (1999) FT Full length CDS FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA36472.2 FT PROTEIN_NAME : F0-ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 340 - 2265 FT DIRECTIONS : positive FT EDITING : 97 P(ccC) -> P(ccT) FT EDITING : 266 L(ctC) -> L(ctT) FT EDITING : 415 P(Cca) -> S(Tca) FT EDITING : 441 S(tCa) -> L(tTa) FT EDITING : 490 R(Cgt) -> C(Tgt) FT EDITING : 536 S(tCa) -> L(tTa) FT EDITING : 556 P(Cct) -> S(Tct) FT EDITING : 557 H(Cat) -> Y(Tat) FT EDITING : 564 S(tCa) -> L(tTa) FT EDITING : 578 S(tCa) -> L(tTa) FT EDITING : 624 H(Cat) -> Y(Tat) FT EDITING : 638 T(aCa) -> I(aTa) FT EDITING : 642 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1926 NT; CD 1 atgatgactc attggaagaa ggagataact gctttggcaa accagataat CD 51 tactaatgtc cctcgaccta cacggcgagt cttattcgga ctcggcgtgc CD 101 tgttcaccct ctttgaggtc gggagacacg ggctgttgtt tgaaacggaa CD 151 attattctac aagccctctt tggcatagga acagcggctt ctattttgtt CD 201 tttttgtaat ttccgcaccc gagagcactt tctctataca tttctactaa CD 251 cgatttattt ggctttattc ttcctaaaga gggctttccc Ccttttggaa CD 301 ttcgcctttt tggctatatt gatcttttcg gtttgcttct ttcctaaaaa CD 351 tggacgatta cggcattcgc tagagaactg ttcttttatt ttcctactcc CD 401 tttgggggag ttaccggctt ttggagactc cgtggcacga atggccactc CD 451 tatgtttgtg gtctcttaat gttattcacg cttcttcaag cgctggtcca CD 501 tcgaaaggac gaaggggtcg gcaagtttat tctgccggct accttcctaa CD 551 ttttaatgag tgccctcgtg ctccttgggc ttcactcagg ggcgattcat CD 601 aatctaccgg aaaaggcggc cctaacgggc gccgcagtct taataatctt CD 651 tagccaagcg gccgccgagt ccacaaggga gcggtggctt gcaattgggg CD 701 cgtatctcat gtgtatcccg tgtatactat atatcctagg aggggccacg CD 751 gattggcccc tattcgtaca acaaatccgc cttttttttt ttatcctCgg CD 801 cctagtattc ggtttttttt gggttgttac ttatgaggac gtaaaagagc CD 851 agaaggatct gctcccgatc ctatctgcga tcttctccac tttggcgtcg CD 901 gcgaggtgtg gccccggcgt ctgggtaaaa gagtggctcg gcgccttttc CD 951 cttcaccatt ggggcgtatt ttttatttga gaaggtaggc taccgcaaag CD 1001 atacccttca agaaacgtcc cgtacttggg aagcttggtt ttgctttttt CD 1051 gctgttcttt cttttggtgt tgcacttagt ttttttcatg catcacccgc CD 1101 cccaggggtc ggaactgaaa gtgaagcttt tcacgatgcg attaatccag CD 1151 cagcgggacg gatccccagc ccgctagagc aattttccat tctcccattg CD 1201 attcctatga aaataggaaa cttgtatttc tcattcacaa atCcatcttt CD 1251 gtttatgctg ctaactctca gtttggtcct acttctgctt cattttgtta CD 1301 ctaaaaaggg aggaggaaac tCagtaccaa atgtttggca atccttggta CD 1351 gagcttattt atgatttcgt gctgaacctg gtaaacgaac aaataggtgg CD 1401 tctttccgga aatgtgaaac aaaagttttt cccttgcatc ttggtcactt CD 1451 ttactttttt gttatttCgt aatctccagg gtatgatacc ctatagcttt CD 1501 acagttacaa gtcattttct cattactttg ggtctttcat tttccatttt CD 1551 tattggcatt actatagtgg gatttcaaag aaatgggctt cattttttaa CD 1601 gcttctCatt acctgcagga gtcccgctgc cgttagcacc ttttttagta CD 1651 ctccttgagc taatcCctCa ttgttttcgc gcattaagct Caggaatacg CD 1701 tttatttgct aatatgatgg ccggtcatag ttCagtaaag attttaagtg CD 1751 ggttcgcttg gactatgcta tgtatgaatg atcttttata tttcatagga CD 1801 gatcttggtc ctttatttat agttcttgca ttaaccggtc ttgaattagg CD 1851 tgtagctata ttacaagctC atgtttttac gatcttaatc tgtatttact CD 1901 tgaatgatgc taCaaatctc catCaa FT EDITED CDNA CD 1 atgatgactc attggaagaa ggagataact gctttggcaa accagataat CD 51 tactaatgtc cctcgaccta cacggcgagt cttattcgga ctcggcgtgc CD 101 tgttcaccct ctttgaggtc gggagacacg ggctgttgtt tgaaacggaa CD 151 attattctac aagccctctt tggcatagga acagcggctt ctattttgtt CD 201 tttttgtaat ttccgcaccc gagagcactt tctctataca tttctactaa CD 251 cgatttattt ggctttattc ttcctaaaga gggctttccc Tcttttggaa CD 301 ttcgcctttt tggctatatt gatcttttcg gtttgcttct ttcctaaaaa CD 351 tggacgatta cggcattcgc tagagaactg ttcttttatt ttcctactcc CD 401 tttgggggag ttaccggctt ttggagactc cgtggcacga atggccactc CD 451 tatgtttgtg gtctcttaat gttattcacg cttcttcaag cgctggtcca CD 501 tcgaaaggac gaaggggtcg gcaagtttat tctgccggct accttcctaa CD 551 ttttaatgag tgccctcgtg ctccttgggc ttcactcagg ggcgattcat CD 601 aatctaccgg aaaaggcggc cctaacgggc gccgcagtct taataatctt CD 651 tagccaagcg gccgccgagt ccacaaggga gcggtggctt gcaattgggg CD 701 cgtatctcat gtgtatcccg tgtatactat atatcctagg aggggccacg CD 751 gattggcccc tattcgtaca acaaatccgc cttttttttt ttatcctTgg CD 801 cctagtattc ggtttttttt gggttgttac ttatgaggac gtaaaagagc CD 851 agaaggatct gctcccgatc ctatctgcga tcttctccac tttggcgtcg CD 901 gcgaggtgtg gccccggcgt ctgggtaaaa gagtggctcg gcgccttttc CD 951 cttcaccatt ggggcgtatt ttttatttga gaaggtaggc taccgcaaag CD 1001 atacccttca agaaacgtcc cgtacttggg aagcttggtt ttgctttttt CD 1051 gctgttcttt cttttggtgt tgcacttagt ttttttcatg catcacccgc CD 1101 cccaggggtc ggaactgaaa gtgaagcttt tcacgatgcg attaatccag CD 1151 cagcgggacg gatccccagc ccgctagagc aattttccat tctcccattg CD 1201 attcctatga aaataggaaa cttgtatttc tcattcacaa atTcatcttt CD 1251 gtttatgctg ctaactctca gtttggtcct acttctgctt cattttgtta CD 1301 ctaaaaaggg aggaggaaac tTagtaccaa atgtttggca atccttggta CD 1351 gagcttattt atgatttcgt gctgaacctg gtaaacgaac aaataggtgg CD 1401 tctttccgga aatgtgaaac aaaagttttt cccttgcatc ttggtcactt CD 1451 ttactttttt gttatttTgt aatctccagg gtatgatacc ctatagcttt CD 1501 acagttacaa gtcattttct cattactttg ggtctttcat tttccatttt CD 1551 tattggcatt actatagtgg gatttcaaag aaatgggctt cattttttaa CD 1601 gcttctTatt acctgcagga gtcccgctgc cgttagcacc ttttttagta CD 1651 ctccttgagc taatcTctTa ttgttttcgc gcattaagct Taggaatacg CD 1701 tttatttgct aatatgatgg ccggtcatag ttTagtaaag attttaagtg CD 1751 ggttcgcttg gactatgcta tgtatgaatg atcttttata tttcatagga CD 1801 gatcttggtc ctttatttat agttcttgca ttaaccggtc ttgaattagg CD 1851 tgtagctata ttacaagctT atgtttttac gatcttaatc tgtatttact CD 1901 tgaatgatgc taTaaatctc catTaa SQ SEQUENCE 642 AA; MMTHWKKEIT ALANQIITNV PRPTRRVLFG LGVLFTLFEV GRHGLLFETE IILQALFGIG TAASILFFCN FRTREHFLYT FLLTIYLALF FLKRAFPLLE FAFLAILIFS VCFFPKNGRL RHSLENCSFI FLLLWGSYRL LETPWHEWPL YVCGLLMLFT LLQALVHRKD EGVGKFILPA TFLILMSALV LLGLHSGAIH NLPEKAALTG AAVLIIFSQA AAESTRERWL AIGAYLMCIP CILYILGGAT DWPLFVQQIR LFFFILGLVF GFFWVVTYED VKEQKDLLPI LSAIFSTLAS ARCGPGVWVK EWLGAFSFTI GAYFLFEKVG YRKDTLQETS RTWEAWFCFF AVLSFGVALS FFHASPAPGV GTESEAFHDA INPAAGRIPS PLEQFSILPL IPMKIGNLYF SFTNSSLFML LTLSLVLLLL HFVTKKGGGN LVPNVWQSLV ELIYDFVLNL VNEQIGGLSG NVKQKFFPCI LVTFTFLLFC NLQGMIPYSF TVTSHFLITL GLSFSIFIGI TIVGFQRNGL HFLSFLLPAG VPLPLAPFLV LLELISYCFR ALSLGIRLFA NMMAGHSLVK ILSGFAWTML CMNDLLYFIG DLGPLFIVLA LTGLELGVAI LQAYVFTILI CIYLNDAINL H* // ID AB020062_1 STANDARD; PRT; 101 AA. AC AB020062; DT Tue Jul 21 07:00:01 2009 DE Beta vulgaris mitochondrial nad4L and orf25 genes for NADH OS mitochondrion Beta vulgaris OC Beta vulgaris RN [1] RL Theor. Appl. Genet. 100, 214-220 (2000) FT Full length CDS FT GENE : nad4L FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA94420.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 71 - 373 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 16 S(tCa) -> L(tTa) FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 32 S(tCa) -> L(tTa) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 44 S(tCg) -> L(tTg) FT EDITING : 53 S(tCg) -> L(tTg) FT EDITING : 60 S(tCa) -> L(tTa) FT EDITING : 66 P(cCa) -> L(cTa) FT EDITING : 94 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggattcta tcaaatattt tacattttct atgatcatct ttatttCagg CD 51 tattCggggt attctcctta atagacgaaa tattcttatt atgtCaatgt CD 101 caattgaatC aatgttatta gctgtgaatt Cgaacttttt ggtattttct CD 151 gtttcttCgg atgatatgat gggtcaatCa tttgctttat tggttcCaac CD 201 ggtggcagct gcggaatctg ctattgggtt agccattttc gttattactt CD 251 tccgagtccg gggtactatt gctgtagaat Ctattaatag cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggattcta tcaaatattt tacattttct atgatcatct ttatttTagg CD 51 tattTggggt attctcctta atagacgaaa tattcttatt atgtTaatgt CD 101 caattgaatT aatgttatta gctgtgaatt Tgaacttttt ggtattttct CD 151 gtttcttTgg atgatatgat gggtcaatTa tttgctttat tggttcTaac CD 201 ggtggcagct gcggaatctg ctattgggtt agccattttc gttattactt CD 251 tccgagtccg gggtactatt gctgtagaat Ttattaatag cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDSIKYFTFS MIIFILGIWG ILLNRRNILI MLMSIELMLL AVNLNFLVFS VSLDDMMGQL FALLVLTVAA AESAIGLAIF VITFRVRGTI AVEFINSIQG * // ID AB020062_2 STANDARD; PRT; 199 AA. AC AB020062; DT Tue Jul 21 07:00:01 2009 DE Beta vulgaris mitochondrial nad4L and orf25 genes for NADH OS mitochondrion Beta vulgaris OC Beta vulgaris RN [1] RL Theor. Appl. Genet. 100, 214-220 (2000) FT Full length CDS FT GENE : orf25 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA94421.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 540 - 1136 FT DIRECTIONS : positive FT EDITING : 5 S(tCc) -> F(tTc) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 40 R(Cgt) -> C(Tgt) FT EDITING : 72 S(tCg) -> L(tTg) FT EDITING : 76 P(cCc) -> L(cTc) FT EDITING : 83 P(cCt) -> L(cTt) FT EDITING : 84 P(CCg) -> L(TTg) FT EDITING : 128 L(Cta) -> L(Tta) FT EDITING : 132 S(tCa) -> L(tTa) FT EDITING : 136 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 597 NT; CD 1 atgagaaaga gttCcacgaa gatgcaggct agaaagatgc tatttgctgc CD 51 tattctatct atttgtgcat Caagttcgaa gaagatctCa atctataatg CD 101 aagaaatgat agtagctCgt tgttttatag gctttatcat attcagtcgg CD 151 aagagtttag gtaatacttt caaagtgact ctcgacgaga gaatccaggc CD 201 tattcaggaa gaatCgcagc aattccCcaa tcctaacgaa gtagttcCtC CD 251 Cggaatccaa tgaacaacaa cgattactta gggtcagctt gcgaatttgt CD 301 ggaaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaaaacagtg caagctttgt tatgtcgaaa cCtaaatgtt aagtCagcaa CD 401 cacttcCaaa tgccacttct tcccgtcgca cccgtcttca ggatgatcta CD 451 gtcacaggtt ttcacttctc agtgagtgaa agatttgtcc ccgggtctac CD 501 gttgaaagct tctatagtag aactcattcg agaaggcttg gcggtcttaa CD 551 gaatggttcg ggtaggaggt tctcttaaga ataaagaaga caaatag FT EDITED CDNA CD 1 atgagaaaga gttTcacgaa gatgcaggct agaaagatgc tatttgctgc CD 51 tattctatct atttgtgcat Taagttcgaa gaagatctTa atctataatg CD 101 aagaaatgat agtagctTgt tgttttatag gctttatcat attcagtcgg CD 151 aagagtttag gtaatacttt caaagtgact ctcgacgaga gaatccaggc CD 201 tattcaggaa gaatTgcagc aattccTcaa tcctaacgaa gtagttcTtT CD 251 Tggaatccaa tgaacaacaa cgattactta gggtcagctt gcgaatttgt CD 301 ggaaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaaaacagtg caagctttgt tatgtcgaaa cTtaaatgtt aagtTagcaa CD 401 cacttcTaaa tgccacttct tcccgtcgca cccgtcttca ggatgatcta CD 451 gtcacaggtt ttcacttctc agtgagtgaa agatttgtcc ccgggtctac CD 501 gttgaaagct tctatagtag aactcattcg agaaggcttg gcggtcttaa CD 551 gaatggttcg ggtaggaggt tctcttaaga ataaagaaga caaatag SQ SEQUENCE 199 AA; MRKSFTKMQA RKMLFAAILS ICALSSKKIL IYNEEMIVAC CFIGFIIFSR KSLGNTFKVT LDERIQAIQE ELQQFLNPNE VVLLESNEQQ RLLRVSLRIC GTVVESLPMA RCAPKCEKTV QALLCRNLNV KLATLLNATS SRRTRLQDDL VTGFHFSVSE RFVPGSTLKA SIVELIREGL AVLRMVRVGG SLKNKEDK* // ID AB022059_3 STANDARD; PRT; 193 AA. AC AB022059; DT Tue Jul 21 07:00:01 2009 DE Aegilops crassa mitochondrial gene for ORF48, ORF25, CLPP. OS mitochondrion Aegilops crassa OC Aegilops crassa RN [1] RL Unpublished FT Full length CDS FT GENE : orf25 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA82045.1 FT PROTEIN_NAME : ORF25 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 924 - 1502 FT DIRECTIONS : positive FT EDITING : 14 L(Cta) -> L(Tta) FT EDITING : 19 P(Cca) -> S(Tca) FT EDITING : 20 S(tCt) -> F(tTt) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 26 P(Ccg) -> S(Tcg) FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 40 R(Cgt) -> C(Tgt) FT EDITING : 83 P(cCg) -> L(cTg) FT EDITING : 132 S(tCa) -> L(tTa) FT EDITING : 139 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 579 NT; CD 1 atgagatttc tttctacgga tatgaaggat agaaatatgC tatttgctgc CD 51 tattCcatCt atttgtgcat CaagtCcgaa gaagatctCa atctataatg CD 101 aagaaatgat agtagctCgt tgttttatag gctttctcat attcagtcgg CD 151 aagagtttag gtaagacttt caaagaaact ctcgacggga gaatcgagtc CD 201 tattcaggaa gaattgctgc aattcttcaa tcctaacgaa gtaattcCgg CD 251 aggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgc CD 301 agcaccgtag tagaatcatt accaacggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgta aagtCagcaa CD 401 cacttctaaa tgccaCttct tcccgccgca tccgtcttca ggacgatata CD 451 gtcacaggtt ttcacttttc agtgagtgaa agatttgtat ccgggtctac CD 501 gttcaaagct tctaccatag acctaattcg agaaggcttg atagtcctaa CD 551 gaaaggtgag ggtggggggt tctatttag FT EDITED CDNA CD 1 atgagatttc tttctacgga tatgaaggat agaaatatgT tatttgctgc CD 51 tattTcatTt atttgtgcat TaagtTcgaa gaagatctTa atctataatg CD 101 aagaaatgat agtagctTgt tgttttatag gctttctcat attcagtcgg CD 151 aagagtttag gtaagacttt caaagaaact ctcgacggga gaatcgagtc CD 201 tattcaggaa gaattgctgc aattcttcaa tcctaacgaa gtaattcTgg CD 251 aggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgc CD 301 agcaccgtag tagaatcatt accaacggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgta aagtTagcaa CD 401 cacttctaaa tgccaTttct tcccgccgca tccgtcttca ggacgatata CD 451 gtcacaggtt ttcacttttc agtgagtgaa agatttgtat ccgggtctac CD 501 gttcaaagct tctaccatag acctaattcg agaaggcttg atagtcctaa CD 551 gaaaggtgag ggtggggggt tctatttag SQ SEQUENCE 193 AA; MRFLSTDMKD RNMLFAAISF ICALSSKKIL IYNEEMIVAC CFIGFLIFSR KSLGKTFKET LDGRIESIQE ELLQFFNPNE VILEESNEQQ RLLRISLRIC STVVESLPTA RCAPKCEKTV QALLCRNLNV KLATLLNAIS SRRIRLQDDI VTGFHFSVSE RFVSGSTFKA STIDLIREGL IVLRKVRVGG SI* // ID AB022060_1 STANDARD; PRT; 193 AA. AC AB022060; DT Tue Jul 21 07:00:01 2009 DE Triticum aestivum mitochondrial gene for ORF25, complete cds. OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Unpublished FT Full length CDS FT GENE : orf25 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA82046.1 FT PROTEIN_NAME : ORF25 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1425 - 2003 FT DIRECTIONS : positive FT EDITING : 14 L(Cta) -> L(Tta) FT EDITING : 19 P(Cca) -> S(Tca) FT EDITING : 20 S(tCt) -> F(tTt) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 26 P(Ccg) -> S(Tcg) FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 40 R(Cgt) -> C(Tgt) FT EDITING : 83 P(cCg) -> L(cTg) FT EDITING : 132 S(tCa) -> L(tTa) FT EDITING : 139 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 579 NT; CD 1 atgagatttc tttctacgga tatgaaggat agaaatatgC tatttgctgc CD 51 tattCcatCt atttgtgcat CaagtCcgaa gaagatctCa atctataatg CD 101 aagaaatgat agtagctCgt tgttttatag gctttctcat attcagtcgg CD 151 aagagtttag gtaagacttt caaagaaact ctcgacggga gaatcgagtc CD 201 tattcaggaa gaattgctgc aattcttcaa tcctaacgaa gtaattcCgg CD 251 aggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgc CD 301 agcaccgtag tagaatcatt accaacggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgta aagtCagcaa CD 401 cacttctaaa tgccaCttct tcccgccgca tccgtcttca ggacgatata CD 451 gtcacaggtt ttcacttttc agtgagtgaa agatttgtat ccgggtctac CD 501 gttcaaagct tctaccatag acctaattcg agaaggcttg atagtcctaa CD 551 gaaaggtgag ggtggggggt tctatttag FT EDITED CDNA CD 1 atgagatttc tttctacgga tatgaaggat agaaatatgT tatttgctgc CD 51 tattTcatTt atttgtgcat TaagtTcgaa gaagatctTa atctataatg CD 101 aagaaatgat agtagctTgt tgttttatag gctttctcat attcagtcgg CD 151 aagagtttag gtaagacttt caaagaaact ctcgacggga gaatcgagtc CD 201 tattcaggaa gaattgctgc aattcttcaa tcctaacgaa gtaattcTgg CD 251 aggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgc CD 301 agcaccgtag tagaatcatt accaacggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgta aagtTagcaa CD 401 cacttctaaa tgccaTttct tcccgccgca tccgtcttca ggacgatata CD 451 gtcacaggtt ttcacttttc agtgagtgaa agatttgtat ccgggtctac CD 501 gttcaaagct tctaccatag acctaattcg agaaggcttg atagtcctaa CD 551 gaaaggtgag ggtggggggt tctatttag SQ SEQUENCE 193 AA; MRFLSTDMKD RNMLFAAISF ICALSSKKIL IYNEEMIVAC CFIGFLIFSR KSLGKTFKET LDGRIESIQE ELLQFFNPNE VILEESNEQQ RLLRISLRIC STVVESLPTA RCAPKCEKTV QALLCRNLNV KLATLLNAIS SRRIRLQDDI VTGFHFSVSE RFVSGSTFKA STIDLIREGL IVLRKVRVGG SI* // ID AB078009_3 STANDARD; PRT; 101 AA. AC AB078009; DT Tue Jul 21 07:00:05 2009 DE Physcomitrella patens chloroplast genes for photosystem I P700 OS chloroplast Physcomitrella patens OC Physcomitrella patens RN [1] RL Biochim. Biophys. Acta 1576 (3), 346-349 (2002) RL PUBMED 12084583 FT Full length CDS FT GENE : rps14 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC05490.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 4674 - 4976 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggcaaaaa aaagtcttat tgaaagagaa aaaaaaagac aaaaattaga CD 51 aaaaaaatat caagattttc gtcactctat aaaaaaaaaa attaaggaaa CD 101 cttcatcctt agatgaaaaa tgggaatttc aaaaacaatt acaagcttta CD 151 ccacgtaata gcgcacctac aagacttcat cgtcgttgtt ttttaaccgg CD 201 aagacctaga gcaaattatc gtgattttgg cttatctagg catgtattac CD 251 gagaaatggc tcatgcatgt tttttacctg gagtaactaa atctagttgg CD 301 taa FT EDITED CDNA CD 1 aTggcaaaaa aaagtcttat tgaaagagaa aaaaaaagac aaaaattaga CD 51 aaaaaaatat caagattttc gtcactctat aaaaaaaaaa attaaggaaa CD 101 cttcatcctt agatgaaaaa tgggaatttc aaaaacaatt acaagcttta CD 151 ccacgtaata gcgcacctac aagacttcat cgtcgttgtt ttttaaccgg CD 201 aagacctaga gcaaattatc gtgattttgg cttatctagg catgtattac CD 251 gagaaatggc tcatgcatgt tttttacctg gagtaactaa atctagttgg CD 301 taa SQ SEQUENCE 101 AA; MAKKSLIERE KKRQKLEKKY QDFRHSIKKK IKETSSLDEK WEFQKQLQAL PRNSAPTRLH RRCFLTGRPR ANYRDFGLSR HVLREMAHAC FLPGVTKSSW * // ID AB086179_2 STANDARD; PRT; 35 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbM FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55324.1 FT PROTEIN_NAME : photosystem II M-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 832 - 936 FT DIRECTIONS : positive FT EDITING : 23 P(cCt) -> L(cTt) FT EDITING : 25 F(Ttt) -> L(Ctt) FT CODON_START : 1 CL CDNALEN 105 NT; CD 1 atggaagtaa atattcttgc ctttattgct actgcactct tcattttaat CD 51 ccctactgct tttctacCta ttTtttatgt acaaacagct agtcaaggca CD 101 gttag FT EDITED CDNA CD 1 atggaagtaa atattcttgc ctttattgct actgcactct tcattttaat CD 51 ccctactgct tttctacTta ttCtttatgt acaaacagct agtcaaggca CD 101 gttag SQ SEQUENCE 35 AA; MEVNILAFIA TALFILIPTA FLLILYVQTA SQGS* // ID AB086179_4 STANDARD; PRT; 1072 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpoB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55326.1 FT PROTEIN_NAME : RNA polymerase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3486 - 6701 FT DIRECTIONS : positive FT EDITING : 46 *(Tag) -> Q(Cag) FT EDITING : 80 S(tCa) -> L(tTa) FT EDITING : 150 T(aCt) -> I(aTt) FT EDITING : 152 P(Cca) -> S(Tca) FT EDITING : 259 P(cCa) -> L(cTa) FT EDITING : 294 S(tCa) -> L(tTa) FT EDITING : 326 S(tCa) -> L(tTa) FT EDITING : 392 W(Tgg) -> R(Cgg) FT EDITING : 397 S(tCa) -> L(tTa) FT EDITING : 414 T(aCt) -> I(aTt) FT EDITING : 418 Y(Tat) -> H(Cat) FT EDITING : 421 *(Tga) -> R(Cga) FT EDITING : 423 R(Cgt) -> C(Tgt) FT EDITING : 522 S(tCa) -> L(tTa) FT EDITING : 531 S(tCg) -> L(tTg) FT EDITING : 534 L(Ctt) -> F(Ttt) FT EDITING : 542 C(Tgt) -> R(Cgt) FT EDITING : 551 C(Tgt) -> R(Cgt) FT EDITING : 574 P(cCa) -> L(cTa) FT EDITING : 650 S(tCa) -> L(tTa) FT EDITING : 652 S(tCa) -> L(tTa) FT EDITING : 668 S(tCt) -> F(tTt) FT EDITING : 719 C(Tgt) -> R(Cgt) FT EDITING : 721 S(tCa) -> L(tTa) FT EDITING : 731 F(tTt) -> S(tCt) FT EDITING : 738 A(gCt) -> V(gTt) FT EDITING : 739 S(tCg) -> L(tTg) FT EDITING : 759 S(tCa) -> L(tTa) FT EDITING : 832 P(Ccg) -> S(Tcg) FT EDITING : 842 H(Cat) -> Y(Tat) FT EDITING : 860 L(tTa) -> S(tCa) FT EDITING : 879 P(cCg) -> L(cTg) FT EDITING : 897 L(tTa) -> S(tCa) FT EDITING : 902 S(tCt) -> F(tTt) FT EDITING : 962 C(Tgc) -> R(Cgc) FT EDITING : 969 P(cCt) -> L(cTt) FT EDITING : 973 *(Taa) -> Q(Caa) FT EDITING : 984 *(Taa) -> Q(Caa) FT EDITING : 1007 P(cCt) -> L(cTt) FT EDITING : 1023 V(gTc) -> A(gCc) FT EDITING : 1048 *(Tga) -> R(Cga) FT EDITING : 1052 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 3216 NT; CD 1 atgattttaa ggaaaaaaat agagttgttt gtattacctg aatttacaga CD 51 gatacaattc gaaggatttc atcgctttat taagtatggg ttagttaaag CD 101 aactcaacga tttccctaaa attgaagata cagatTagga atttgaattt CD 151 caacttttta gtaggcagta tcaactggca gaacctccta ttgaggagag CD 201 agatgctata tatcaatcta taacatattc atctgattCa tatgtgccgg CD 251 ctcaactaac tgaaagaaaa aaaggaagag taaaaaaaca aattgtattt CD 301 cttggaagta ttcccctaat gaattcccag ggtacttttg ttgttaatgg CD 351 agttgctaga gtaattataa atcaaattct acgaagtccc ggcatttatt CD 401 ataattcaga attagatcgc aacggaattc ctatatatac tggcactaCt CD 451 attCcagatt ggggaagaag gttgaaacta gaaattgatg gaaaaacaag CD 501 aatctgggct cgtataagca aaaaaagaaa agtatctatt ctagttttat CD 551 tattagctat gggtttggac attgaagaaa tcctaggcaa tgtctgttat CD 601 cccaaattac tcttaggttg tatgaaaagg aagacgaaga aagagcatct CD 651 tcagtcaacg gaagatgcca tagtagaact ttataaacaa atatattgta CD 701 taggcggaga tttaaatttt tctgagtcta taagtaagga gttgcaaaaa CD 751 aaattttttc agcagagatg tgaacCagga aaaataggtc gattaaactt CD 801 aaataagaaa cttaatcttg atgtacctga aaacgaaaat tttttattac CD 851 cacaagatct attagctgcc gtagattatt Caataaaaat tagatttggc CD 901 ataggtgtac ctgacgatat tgatcactta aaaaatcgcc gtgttcgttc CD 951 tgtaactgac ctattgcaag atcaatCaaa attagctttg aatcgtttag CD 1001 agaattcgat acggcaagcc atacgtggag caaatagacg tgaacattta CD 1051 ccaactccca aaagcctagt aacgtcaact ccattaataa caacttttaa CD 1101 agaattcttt ggttcgcatc ctttgtcaca attcctagat caaactaatc CD 1151 cattgacaga agtggttcat aaaTggagac taagttcctC agggccagga CD 1201 ggattaacaa gacgaactgc aagttttcaa gtacgagata Ctcatcctag CD 1251 tTattatggg TgaattCgtc ccattgaaac atctgaagga atgaatgccg CD 1301 gacttgttgc atcactagcc attcatgcca aagttgataa ttggggatct CD 1351 ttggagagtc cattctataa aatatctgga gtatctgaag aagaagatat CD 1401 gactttttta tcagcaggag aagatgaaaa ctatcacata gcaacgggaa CD 1451 attgtttagc cttgaatcaa acaaatcaag aggaacaagt aactccagct CD 1501 cgatatcgac aagaatttgt cgccactgca tggaatcaaa taaaccttcg CD 1551 aagtattttt ccttCacaat atttttctat tggaacttcc tCgattcctC CD 1601 ttcttgaaca taatgatgca aatTgtgctt taatgggttt taatatgcag CD 1651 Tgtcaagctg ttccactttc caaacctgag aagtgcattg tagggacagg CD 1701 attggaaagc caaacagctc Cagattcagg aagtgtaatt gtagccacag CD 1751 aaggaggaag aattagttat accgatggta gaagaattac attattgacg CD 1801 aaggagaaag aggtagaaac aaaattggta atatatcaac gttccaataa CD 1851 tagtacttgt atacatgaga aaccccgaat tcagttgaga gaatacgtaa CD 1901 aaaagggaca aattctagcg gatgggagag ctactgcagg aggagaatCa CD 1951 gcttCaggaa aaaatatatt agtagcttat atgccatggg agggatataa CD 2001 ttCtgaagat gctatactta ttagtgaacg tctgatacat gaagatattt CD 2051 atacttctat tcatattgag aggtatgaaa ttgaagctcg cgtaacaagt CD 2101 cagggtcccg aaagaattac tagagaaata cctcatttag ataattattt CD 2151 acttTgtcat tCagatgaaa gtggtcttgt attaccagga tTttgggtag CD 2201 aaacaggaga tgCttCggtt ggtaaattga cacctcagga aacagaagaa CD 2251 tcactacgtg ctccagaagg taaatCatta caagctatat ttgggattca CD 2301 agtagttaca gcaaaagaga cttgtcttaa agtaccttta ggcggaagag CD 2351 gccgagtcat cgatataaaa tggatctatc aggaaaaaac ttcgacaact CD 2401 tatgcagaaa ttgtccatgt atatatcctg caaaagcgcg aaatacaagt CD 2451 aggtgataaa gtagctggaa gacatggaaa taagggtatt attCcgaaaa CD 2501 tattgcctag acaggatatg cctCatttac aagatggaac acctgttgat CD 2551 atggttctaa gtcccttagg tgtaccttTa aggatgaatg tgggacaaat CD 2601 atttgaatgt ttacttggtt tagcagggga cttccCgcaa aagcattata CD 2651 gagtaacacc tttcgatgaa agatatgaga gggaagcttT aagaaagcta CD 2701 gtttCttctg aattgcatga ggctagtaga caaactgcta atccatggtt CD 2751 atttgaatct gataatcctg gaaaaagcgg attacttgat ggaagaacgg CD 2801 gagacatttt tgaagaacct gtcactatag gaaaggctta tatgttgaaa CD 2851 ttgatccatc aagttgatga taaaattcat gcaTgctcta gtggacctta CD 2901 tgcacCtgtg acgcaaTaac ctcttagagg aaaatctcgg cgggggggaT CD 2951 aacgagtagg agaaatggaa gtttgggctt tggaaggttt cggtgccgct CD 3001 tataccttag aagaaatgcC tactataaag tctgatcata ttcaggcccg CD 3051 ttttgaggta cttagggTca ttgtaactgg agaattgata cccaaacctg CD 3101 aaacagctcc agaatctttt cgattattgg ttcgagaatt gTgatctcta CD 3151 gctcCaaatt tagatcatat tattgtatct gaaaaagaat taagaataaa CD 3201 atttaaagac atttaa FT EDITED CDNA CD 1 atgattttaa ggaaaaaaat agagttgttt gtattacctg aatttacaga CD 51 gatacaattc gaaggatttc atcgctttat taagtatggg ttagttaaag CD 101 aactcaacga tttccctaaa attgaagata cagatCagga atttgaattt CD 151 caacttttta gtaggcagta tcaactggca gaacctccta ttgaggagag CD 201 agatgctata tatcaatcta taacatattc atctgattTa tatgtgccgg CD 251 ctcaactaac tgaaagaaaa aaaggaagag taaaaaaaca aattgtattt CD 301 cttggaagta ttcccctaat gaattcccag ggtacttttg ttgttaatgg CD 351 agttgctaga gtaattataa atcaaattct acgaagtccc ggcatttatt CD 401 ataattcaga attagatcgc aacggaattc ctatatatac tggcactaTt CD 451 attTcagatt ggggaagaag gttgaaacta gaaattgatg gaaaaacaag CD 501 aatctgggct cgtataagca aaaaaagaaa agtatctatt ctagttttat CD 551 tattagctat gggtttggac attgaagaaa tcctaggcaa tgtctgttat CD 601 cccaaattac tcttaggttg tatgaaaagg aagacgaaga aagagcatct CD 651 tcagtcaacg gaagatgcca tagtagaact ttataaacaa atatattgta CD 701 taggcggaga tttaaatttt tctgagtcta taagtaagga gttgcaaaaa CD 751 aaattttttc agcagagatg tgaacTagga aaaataggtc gattaaactt CD 801 aaataagaaa cttaatcttg atgtacctga aaacgaaaat tttttattac CD 851 cacaagatct attagctgcc gtagattatt Taataaaaat tagatttggc CD 901 ataggtgtac ctgacgatat tgatcactta aaaaatcgcc gtgttcgttc CD 951 tgtaactgac ctattgcaag atcaatTaaa attagctttg aatcgtttag CD 1001 agaattcgat acggcaagcc atacgtggag caaatagacg tgaacattta CD 1051 ccaactccca aaagcctagt aacgtcaact ccattaataa caacttttaa CD 1101 agaattcttt ggttcgcatc ctttgtcaca attcctagat caaactaatc CD 1151 cattgacaga agtggttcat aaaCggagac taagttcctT agggccagga CD 1201 ggattaacaa gacgaactgc aagttttcaa gtacgagata Ttcatcctag CD 1251 tCattatggg CgaattTgtc ccattgaaac atctgaagga atgaatgccg CD 1301 gacttgttgc atcactagcc attcatgcca aagttgataa ttggggatct CD 1351 ttggagagtc cattctataa aatatctgga gtatctgaag aagaagatat CD 1401 gactttttta tcagcaggag aagatgaaaa ctatcacata gcaacgggaa CD 1451 attgtttagc cttgaatcaa acaaatcaag aggaacaagt aactccagct CD 1501 cgatatcgac aagaatttgt cgccactgca tggaatcaaa taaaccttcg CD 1551 aagtattttt ccttTacaat atttttctat tggaacttcc tTgattcctT CD 1601 ttcttgaaca taatgatgca aatCgtgctt taatgggttt taatatgcag CD 1651 Cgtcaagctg ttccactttc caaacctgag aagtgcattg tagggacagg CD 1701 attggaaagc caaacagctc Tagattcagg aagtgtaatt gtagccacag CD 1751 aaggaggaag aattagttat accgatggta gaagaattac attattgacg CD 1801 aaggagaaag aggtagaaac aaaattggta atatatcaac gttccaataa CD 1851 tagtacttgt atacatgaga aaccccgaat tcagttgaga gaatacgtaa CD 1901 aaaagggaca aattctagcg gatgggagag ctactgcagg aggagaatTa CD 1951 gcttTaggaa aaaatatatt agtagcttat atgccatggg agggatataa CD 2001 ttTtgaagat gctatactta ttagtgaacg tctgatacat gaagatattt CD 2051 atacttctat tcatattgag aggtatgaaa ttgaagctcg cgtaacaagt CD 2101 cagggtcccg aaagaattac tagagaaata cctcatttag ataattattt CD 2151 acttCgtcat tTagatgaaa gtggtcttgt attaccagga tCttgggtag CD 2201 aaacaggaga tgTttTggtt ggtaaattga cacctcagga aacagaagaa CD 2251 tcactacgtg ctccagaagg taaatTatta caagctatat ttgggattca CD 2301 agtagttaca gcaaaagaga cttgtcttaa agtaccttta ggcggaagag CD 2351 gccgagtcat cgatataaaa tggatctatc aggaaaaaac ttcgacaact CD 2401 tatgcagaaa ttgtccatgt atatatcctg caaaagcgcg aaatacaagt CD 2451 aggtgataaa gtagctggaa gacatggaaa taagggtatt attTcgaaaa CD 2501 tattgcctag acaggatatg cctTatttac aagatggaac acctgttgat CD 2551 atggttctaa gtcccttagg tgtaccttCa aggatgaatg tgggacaaat CD 2601 atttgaatgt ttacttggtt tagcagggga cttccTgcaa aagcattata CD 2651 gagtaacacc tttcgatgaa agatatgaga gggaagcttC aagaaagcta CD 2701 gtttTttctg aattgcatga ggctagtaga caaactgcta atccatggtt CD 2751 atttgaatct gataatcctg gaaaaagcgg attacttgat ggaagaacgg CD 2801 gagacatttt tgaagaacct gtcactatag gaaaggctta tatgttgaaa CD 2851 ttgatccatc aagttgatga taaaattcat gcaCgctcta gtggacctta CD 2901 tgcacTtgtg acgcaaCaac ctcttagagg aaaatctcgg cgggggggaC CD 2951 aacgagtagg agaaatggaa gtttgggctt tggaaggttt cggtgccgct CD 3001 tataccttag aagaaatgcT tactataaag tctgatcata ttcaggcccg CD 3051 ttttgaggta cttagggCca ttgtaactgg agaattgata cccaaacctg CD 3101 aaacagctcc agaatctttt cgattattgg ttcgagaatt gCgatctcta CD 3151 gctcTaaatt tagatcatat tattgtatct gaaaaagaat taagaataaa CD 3201 atttaaagac atttaa SQ SEQUENCE 1072 AA; MILRKKIELF VLPEFTEIQF EGFHRFIKYG LVKELNDFPK IEDTDQEFEF QLFSRQYQLA EPPIEERDAI YQSITYSSDL YVPAQLTERK KGRVKKQIVF LGSIPLMNSQ GTFVVNGVAR VIINQILRSP GIYYNSELDR NGIPIYTGTI ISDWGRRLKL EIDGKTRIWA RISKKRKVSI LVLLLAMGLD IEEILGNVCY PKLLLGCMKR KTKKEHLQST EDAIVELYKQ IYCIGGDLNF SESISKELQK KFFQQRCELG KIGRLNLNKK LNLDVPENEN FLLPQDLLAA VDYLIKIRFG IGVPDDIDHL KNRRVRSVTD LLQDQLKLAL NRLENSIRQA IRGANRREHL PTPKSLVTST PLITTFKEFF GSHPLSQFLD QTNPLTEVVH KRRLSSLGPG GLTRRTASFQ VRDIHPSHYG RICPIETSEG MNAGLVASLA IHAKVDNWGS LESPFYKISG VSEEEDMTFL SAGEDENYHI ATGNCLALNQ TNQEEQVTPA RYRQEFVATA WNQINLRSIF PLQYFSIGTS LIPFLEHNDA NRALMGFNMQ RQAVPLSKPE KCIVGTGLES QTALDSGSVI VATEGGRISY TDGRRITLLT KEKEVETKLV IYQRSNNSTC IHEKPRIQLR EYVKKGQILA DGRATAGGEL ALGKNILVAY MPWEGYNFED AILISERLIH EDIYTSIHIE RYEIEARVTS QGPERITREI PHLDNYLLRH LDESGLVLPG SWVETGDVLV GKLTPQETEE SLRAPEGKLL QAIFGIQVVT AKETCLKVPL GGRGRVIDIK WIYQEKTSTT YAEIVHVYIL QKREIQVGDK VAGRHGNKGI ISKILPRQDM PYLQDGTPVD MVLSPLGVPS RMNVGQIFEC LLGLAGDFLQ KHYRVTPFDE RYEREASRKL VFSELHEASR QTANPWLFES DNPGKSGLLD GRTGDIFEEP VTIGKAYMLK LIHQVDDKIH ARSSGPYALV TQQPLRGKSR RGGQRVGEME VWALEGFGAA YTLEEMLTIK SDHIQARFEV LRAIVTGELI PKPETAPESF RLLVRELRSL ALNLDHIIVS EKELRIKFKD I* // ID AB086179_5 STANDARD; PRT; 682 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpoC1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55327.1 FT PROTEIN_NAME : RNA polymerase beta' subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 145/0 FT EDITING : 43 S(tCg) -> L(tTg) FT EDITING : 56 S(tCt) -> F(tTt) FT EDITING : 87 R(Cgt) -> C(Tgt) FT EDITING : 123 L(cTt) -> P(cCt) FT EDITING : 238 *(Taa) -> Q(Caa) FT EDITING : 270 L(cTg) -> P(cCg) FT EDITING : 273 L(cTt) -> P(cCt) FT EDITING : 290 F(tTc) -> S(tCc) FT EDITING : 296 H(Cat) -> Y(Tat) FT EDITING : 335 P(cCt) -> L(cTt) FT EDITING : 341 C(Tgt) -> R(Cgt) FT EDITING : 343 *(Taa) -> Q(Caa) FT EDITING : 344 L(cTt) -> P(cCt) FT EDITING : 355 L(tTg) -> S(tCg) FT EDITING : 368 C(Tgc) -> R(Cgc) FT EDITING : 375 *(Tga) -> R(Cga) FT EDITING : 384 T(aCt) -> I(aTt) FT EDITING : 390 P(cCt) -> L(cTt) FT EDITING : 398 L(cTc) -> P(cCc) FT EDITING : 406 S(tCt) -> F(tTt) FT EDITING : 435 S(Tct) -> P(Cct) FT EDITING : 457 I(aTt) -> T(aCt) FT EDITING : 466 S(tCt) -> F(tTt) FT EDITING : 477 C(Tgt) -> R(Cgt) FT EDITING : 481 S(tCa) -> L(tTa) FT EDITING : 486 S(tCt) -> F(tTt) FT EDITING : 494 *(Taa) -> Q(Caa) FT EDITING : 512 S(tCa) -> L(tTa) FT EDITING : 523 A(gCt) -> V(gTt) FT EDITING : 548 *(Tga) -> R(Cga) FT EDITING : 653 P(cCt) -> L(cTt) FT EDITING : 654 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 2046 NT; CD 1 atgatttacc aagaggagaa tcagcatctt cgaattggat tagcttcccc CD 51 tgaagaaatc cgtggttggg ctgagagaac cttacctaat ggagaagtag CD 101 ttggacgaat aactgaacct tatacttCgc attataaaac gcataaacca CD 151 gagaaagatg gcttatCttg tgaaagaata tttggaccta taaaaagtgg CD 201 aatttgtgct tgtggaaagt accggagtat tgaaaatcag agagaatatt CD 251 caaaaattCg tgagcaatgt ggcgttgaat ttactgaatc tagagttcgt CD 301 agatatagaa tgggatatat agaattggca tgtccagtaa ctcatgtatg CD 351 gtatttgaag cgtcttcTta gttatatcgc aaatcttttg gctaaacctc CD 401 taaaagaatt ggaaagccta gtatactgcg atctttttct cgctaggcca CD 451 atagctaaaa aacctacttt attaaaatta cgaggtttat tcaaatacga CD 501 agatcaatct tggaaggaaa tttttcctcg tttcttttct cctcgtggat CD 551 tcgaagcttt tcaagataga gaagtagcta ctggaggaaa tgctattgaa CD 601 aaaggattag ctagtctgaa tttgcaaatt gttatggatc gtgcatatat CD 651 ggaatggaga aatttgacgg aacaaaaatc taccggaaac gagtgggagg CD 701 atcgtaagat tTaaagaaga aaagatcttt tagttagacg catggaatta CD 751 gccaaaaact ttctccaaac aaatatgaaa ccggaatgga tggttttatc CD 801 attattacTg gttcttcTtc ctgaattaag accaatgatt gaattaggag CD 851 aaggtgaatt aattacttTc gatttaaatg aacttCatag aagagttatt CD 901 tatagaaata atacacttct ggatttttta gccagaggta gatctacacc CD 951 aggaggtttg gttgtttgcc aaaaaagatt ggttcaagaa gctgtggatg CD 1001 cgcCtattga taatggtatt TgtggaTaac Ttatgagaga tagtcataat CD 1051 agagcttata aatTgttttc tgatttaatt gaaggtaaag aaggaagatt CD 1101 tTgcgaaaat ttacttggaa aaTgagttga ttattcaggt cgttccgtta CD 1151 Ctgttgcggg tccctatcCt cccttacatg aatgtggatt gcTcaaagaa CD 1201 atggcagtag agctttCtca agcttttgta attcgaggtt tgattggaag CD 1251 atatctggct ccaaatctcc gagctgctaa aagtatgatt caagacaaag CD 1301 agTctattat atggaagata cttaaagaag ttatacaggg acatccggta CD 1351 ctactaaatc gagcacctaT tttgcataga ttgggaatac aagcatCtga CD 1401 acctattcta gtagagggac gtgctattTg tttacaccct tCagtttgtg CD 1451 caggatCtaa cgcagacttt gatggagatT aaatggctgt ccatatacca CD 1501 ctatctctgg aagcccaagt agaggctcgt ctatCaatgt tttctcatac CD 1551 aaatcttttg tctccagCta caggaaatcc cgtttctgta ccgagtcaag CD 1601 atatgcttct tggaatttat gtatcaacta tcagaagcaa cTgaggcatt CD 1651 tatcaaaatc aatatcatcc gtatgattat agaaataaaa atttttctta CD 1701 taaaatgttt tactttcata gttacgatga tatacttaaa gctgagaaac CD 1751 agaaacaaat aaatttacat agtcctttat ggcttcgatg gcaggtagat CD 1801 ctacatatag tcacttcaat tgatagagaa gtacctattg aaattcaata CD 1851 tgaatctctc ggaacttctt cccagattta tgaaaattac caatttagga CD 1901 agaatagaaa agaaaaaata cttagtatgt acatttgtac aactgctggt CD 1951 cgtattcCtt Ccaatcaaca aatagaagaa gctatacaag gtttttttga CD 2001 agtttctcaa cataggagtc gaccactacc cgctataata gcgtaa FT EDITED CDNA CD 1 atgatttacc aagaggagaa tcagcatctt cgaattggat tagcttcccc CD 51 tgaagaaatc cgtggttggg ctgagagaac cttacctaat ggagaagtag CD 101 ttggacgaat aactgaacct tatacttTgc attataaaac gcataaacca CD 151 gagaaagatg gcttatTttg tgaaagaata tttggaccta taaaaagtgg CD 201 aatttgtgct tgtggaaagt accggagtat tgaaaatcag agagaatatt CD 251 caaaaattTg tgagcaatgt ggcgttgaat ttactgaatc tagagttcgt CD 301 agatatagaa tgggatatat agaattggca tgtccagtaa ctcatgtatg CD 351 gtatttgaag cgtcttcCta gttatatcgc aaatcttttg gctaaacctc CD 401 taaaagaatt ggaaagccta gtatactgcg atctttttct cgctaggcca CD 451 atagctaaaa aacctacttt attaaaatta cgaggtttat tcaaatacga CD 501 agatcaatct tggaaggaaa tttttcctcg tttcttttct cctcgtggat CD 551 tcgaagcttt tcaagataga gaagtagcta ctggaggaaa tgctattgaa CD 601 aaaggattag ctagtctgaa tttgcaaatt gttatggatc gtgcatatat CD 651 ggaatggaga aatttgacgg aacaaaaatc taccggaaac gagtgggagg CD 701 atcgtaagat tCaaagaaga aaagatcttt tagttagacg catggaatta CD 751 gccaaaaact ttctccaaac aaatatgaaa ccggaatgga tggttttatc CD 801 attattacCg gttcttcCtc ctgaattaag accaatgatt gaattaggag CD 851 aaggtgaatt aattacttCc gatttaaatg aacttTatag aagagttatt CD 901 tatagaaata atacacttct ggatttttta gccagaggta gatctacacc CD 951 aggaggtttg gttgtttgcc aaaaaagatt ggttcaagaa gctgtggatg CD 1001 cgcTtattga taatggtatt CgtggaCaac Ctatgagaga tagtcataat CD 1051 agagcttata aatCgttttc tgatttaatt gaaggtaaag aaggaagatt CD 1101 tCgcgaaaat ttacttggaa aaCgagttga ttattcaggt cgttccgtta CD 1151 Ttgttgcggg tccctatcTt cccttacatg aatgtggatt gcCcaaagaa CD 1201 atggcagtag agctttTtca agcttttgta attcgaggtt tgattggaag CD 1251 atatctggct ccaaatctcc gagctgctaa aagtatgatt caagacaaag CD 1301 agCctattat atggaagata cttaaagaag ttatacaggg acatccggta CD 1351 ctactaaatc gagcacctaC tttgcataga ttgggaatac aagcatTtga CD 1401 acctattcta gtagagggac gtgctattCg tttacaccct tTagtttgtg CD 1451 caggatTtaa cgcagacttt gatggagatC aaatggctgt ccatatacca CD 1501 ctatctctgg aagcccaagt agaggctcgt ctatTaatgt tttctcatac CD 1551 aaatcttttg tctccagTta caggaaatcc cgtttctgta ccgagtcaag CD 1601 atatgcttct tggaatttat gtatcaacta tcagaagcaa cCgaggcatt CD 1651 tatcaaaatc aatatcatcc gtatgattat agaaataaaa atttttctta CD 1701 taaaatgttt tactttcata gttacgatga tatacttaaa gctgagaaac CD 1751 agaaacaaat aaatttacat agtcctttat ggcttcgatg gcaggtagat CD 1801 ctacatatag tcacttcaat tgatagagaa gtacctattg aaattcaata CD 1851 tgaatctctc ggaacttctt cccagattta tgaaaattac caatttagga CD 1901 agaatagaaa agaaaaaata cttagtatgt acatttgtac aactgctggt CD 1951 cgtattcTtt Tcaatcaaca aatagaagaa gctatacaag gtttttttga CD 2001 agtttctcaa cataggagtc gaccactacc cgctataata gcgtaa SQ SEQUENCE 682 AA; MIYQEENQHL RIGLASPEEI RGWAERTLPN GEVVGRITEP YTLHYKTHKP EKDGLFCERI FGPIKSGICA CGKYRSIENQ REYSKICEQC GVEFTESRVR RYRMGYIELA CPVTHVWYLK RLPSYIANLL AKPLKELESL VYCDLFLARP IAKKPTLLKL RGLFKYEDQS WKEIFPRFFS PRGFEAFQDR EVATGGNAIE KGLASLNLQI VMDRAYMEWR NLTEQKSTGN EWEDRKIQRR KDLLVRRMEL AKNFLQTNMK PEWMVLSLLP VLPPELRPMI ELGEGELITS DLNELYRRVI YRNNTLLDFL ARGRSTPGGL VVCQKRLVQE AVDALIDNGI RGQPMRDSHN RAYKSFSDLI EGKEGRFREN LLGKRVDYSG RSVIVAGPYL PLHECGLPKE MAVELFQAFV IRGLIGRYLA PNLRAAKSMI QDKEPIIWKI LKEVIQGHPV LLNRAPTLHR LGIQAFEPIL VEGRAIRLHP LVCAGFNADF DGDQMAVHIP LSLEAQVEAR LLMFSHTNLL SPVTGNPVSV PSQDMLLGIY VSTIRSNRGI YQNQYHPYDY RNKNFSYKMF YFHSYDDILK AEKQKQINLH SPLWLRWQVD LHIVTSIDRE VPIEIQYESL GTSSQIYENY QFRKNRKEKI LSMYICTTAG RILFNQQIEE AIQGFFEVSQ HRSRPLPAII A* // ID AB086179_6 STANDARD; PRT; 1446 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpoC2 FT NOTE : GTG start codon FT LOCUS_TAG : FT PROTEIN_ID : BAC55328.1 FT PROTEIN_NAME : RNA polymerase beta'' subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 9600 - 13937 FT DIRECTIONS : positive FT EDITING : 9 F(ttC) -> F(ttT) FT EDITING : 42 P(cCt) -> L(cTt) FT EDITING : 48 *(Taa) -> Q(Caa) FT EDITING : 66 L(cTg) -> P(cCg) FT EDITING : 94 A(gCg) -> V(gTg) FT EDITING : 111 S(tCa) -> L(tTa) FT EDITING : 113 *(Taa) -> Q(Caa) FT EDITING : 137 *(Tga) -> R(Cga) FT EDITING : 142 *(Taa) -> Q(Caa) FT EDITING : 144 Y(Tat) -> H(Cat) FT EDITING : 156 F(TTt) -> P(CCt) FT EDITING : 157 *(Tag) -> Q(Cag) FT EDITING : 195 *(Tga) -> R(Cga) FT EDITING : 197 L(tTa) -> S(tCa) FT EDITING : 204 C(Tgc) -> R(Cgc) FT EDITING : 224 *(Tga) -> R(Cga) FT EDITING : 277 S(tCa) -> L(tTa) FT EDITING : 327 *(Taa) -> Q(Caa) FT EDITING : 328 F(tTt) -> S(tCt) FT EDITING : 341 S(tCc) -> F(tTc) FT EDITING : 347 S(tCc) -> F(tTc) FT EDITING : 356 *(Tga) -> R(Cga) FT EDITING : 432 S(Tct) -> P(Cct) FT EDITING : 608 S(tCt) -> F(tTt) FT EDITING : 613 D(gaT) -> D(gaC) FT EDITING : 621 S(Tca) -> P(Cca) FT EDITING : 632 N(aaT) -> N(aaC) FT EDITING : 665 L(cTc) -> P(cCc) FT EDITING : 673 S(tCa) -> L(tTa) FT EDITING : 679 S(Tct) -> P(Cct) FT EDITING : 686 S(agT) -> S(agC) FT EDITING : 723 G(ggT) -> G(ggC) FT EDITING : 726 Y(taT) -> Y(taC) FT EDITING : 794 P(cCa) -> L(cTa) FT EDITING : 831 *(Taa) -> Q(Caa) FT EDITING : 922 *(Taa) -> Q(Caa) FT EDITING : 1179 S(tCa) -> L(tTa) FT EDITING : 1201 *(Taa) -> Q(Caa) FT EDITING : 1206 C(Tgt) -> R(Cgt) FT EDITING : 1259 H(Cat) -> Y(Tat) FT EDITING : 1260 *(Tag) -> Q(Cag) FT EDITING : 1293 S(tCt) -> F(tTt) FT EDITING : 1311 S(tCa) -> L(tTa) FT EDITING : 1340 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 4338 NT; CD 1 gtggcagaat cagctaaatt gctattCtat aataaagtaa tagatggaac CD 51 tgccataaaa caatttattg gcagattagt agctcacttt ggaattacat CD 101 atacagctca cattttggat caacCtaaaa ctctgggttt tTaacaagct CD 151 acttatgccg ctacttcatt aggcattgac gatctcttaa cagcacTgtc CD 201 aaagggatgg ctcattcaag atgcggaaca tcatagttat actttggaga CD 251 agcatcatcg ctatgggaat gtacatgctg Cggaaaaatt acgtcaactc CD 301 attgaaacat ggtatgctac gagtgagtat tCaaaaTaag aaatgaatcc CD 351 taatttcaga atgactgatc ccttaaatcc ggtacatatg atgtcttttt CD 401 caggagctTg aggaagtgca tcaTaagttT atcaattagt aggtatgaga CD 451 ggattagtgt cagatTTtTa gggacaaatt attgatttac ctattaagag CD 501 taatttccgc gagggattat ctttgaccga atatattatt tcttgttacg CD 551 gtgctcgtaa aggagttgtt gatactgccg tgTgaacatT agatgctgga CD 601 taccttacaT gcagactcgt tgaagtggtt caacatattg tagtacgtaa CD 651 aacagattgt aatacttttT gaggtatttc tttgaattct accgaagata CD 701 agaagaaaaa tttacaaata tttactcagc aaaaactagt gggtcgtgta CD 751 ctagcagata atttatatat aaatgcaaga tgtcttgcta tacgtaatca CD 801 agatattaat actaatctta ttgaaaaatC aataactctt aaaacaccat CD 851 taatttcaat acgatctccc ttgacttgca aaagtatgct ttggatttgt CD 901 caattatgct atggatggag tcttactcac tacggtgatt tagtagaatt CD 951 gggagaagct gtgggtatta tagcaggcTa atTtatcggg gaaccaggaa CD 1001 ctcaactaac attaaggact tCccatacgg gtggagtttC cacaggtgac CD 1051 attgcagaac atgtaTgaac cccttttaat gggactattg aattcgatac CD 1101 agatttagtt tatcccacaa gaacacgtca cggtcacccc gcttgggtat CD 1151 gtcgtaccga tctagctgtt actataaaaa gtcagaataa gatacataat CD 1201 ttgatcatcc catctcaaag tctactctta attcaaaaca atcaatatgt CD 1251 agaatcgaaa caacttattg cggaagttca tgctaaggta tctTctttca CD 1301 aagaaaaggt tcagaaatac atttattgta acatagaagg ggaaatgcac CD 1351 tggagtaaaa gggtacgtca tgcttctaaa tatttacata gtaatgttca CD 1401 tttaatattt aatacgggtc acttatggat attatcagga agttctcatg CD 1451 aagataaaac atcctctatg tttttcaaaa atcaggatca aatcaataca CD 1501 aaatttttca tttctccacg taagatactt tttatgaaaa agactaatca CD 1551 agttaattca aaaaatcttg atccttattt agaaaaagaa atggaaactc CD 1601 taaattattc gaatctctat cttggtatac taaacaagag taggaacttc CD 1651 gtatatccca gtattatttt acatgattat gaggtaaaga gaatttatga CD 1701 tgaaaaaaaa ggcgaaaatt ttcttttatt ggaggaaaga catggagaaa CD 1751 aaaaaacaca aatttttcgt cgatttgttc ttaacatacc aaaaagtgga CD 1801 attttagaaa ataaggatat ttCtgccatt tcaaatgaTc ctggatacgg CD 1851 aattcaaagc Tcaggaatta taaaatatgg tactataaaa gtcaaTccaa CD 1901 ttaaaggaaa aggagaaact tttaagaatc gagaaacgaa aattttaaga CD 1951 cttcgaccga gatatcaagt aattgaacca ggaaattttt ttcTcattcc CD 2001 tgaagaagtg cacatttCat atgaatcttt tccaTctatc ttagtacgaa CD 2051 atgatagTct tataaaaaaa aatacacaaa ttacttcgga tattaggagc CD 2101 caagtaggtg gattagttag aataagaaga aagatgaatg atagttacga CD 2151 ggtaaaagta ttacctggTc gtgtataTca tcccgaagag agacgaaaca CD 2201 tatctaaaca aaatgacatt ttggtaccac cgggagaaga aatttctaat CD 2251 aagtttcaat ctgaaaattg gctttatctt gagtggatta caccccctaa CD 2301 agaaaaacct ttcattttca ttagacctgc aattgaattt atagtacctg CD 2351 aagaaacaga tttagcagaa acgtttactc Caaattcaca aaagaaacaa CD 2401 gaaattttga aagtaaaaaa gattcgatat cttctctacg aagatggtga CD 2451 ggaagttgaa gttacgaata aaactggtat tcaattaatt Taaactggtc CD 2501 tagttctgga ttggaaagaa gattcttcta taaaaaaagt ttatgcttct CD 2551 cttactgaaa tagagacaaa tggattatca aaaaaatttc ttcaaattag CD 2601 cttgatagaa caccctattt ttgagataga aaagaagaag aataatgtca CD 2651 atctaaaata cttattcact aatgaaatta attattctag tcactctttc CD 2701 aattatgaaa atggattatt caatgggtat cgaggcatca ttcgtatctc CD 2751 atctaatgaa aatTaagaag ataaatctct tcccatttta tccccttttg CD 2801 attttgtcca aattttccta tctaaaaatt cagaggagta tactccggaa CD 2851 atgaaagatg aaggaaattt caatttagat accaattcta ttttttacgc CD 2901 caaatctttt gttaaaaaat ttaatcaaaa ttcaattact tctagtcaaa CD 2951 attcttctgg tacttttatt aataaagaat tttataatca taataatata CD 3001 aatcaggaat tcaattcaag aaaaataatt agaaattttt ttctatcaat CD 3051 tgaaagaaat tttatggaaa tacttttact gagaaagtta ggtcttctag CD 3101 gtaattcaca tagtttgccg agcccttttc aattctcttg ttgggcaaat CD 3151 actcataatc aacctatcat taataggtat tcaatacttg aaaatttaag CD 3201 agatgttttt caagttccaa aatggtattt ttttgatgag aataaaaaga CD 3251 cacataaatt agatttatct aaaaattcaa tctatcattt attaacttgg CD 3301 tctttttcta tcgccctttc atatgaagaa ggagcaattc atttagtagg CD 3351 ccttggacaa tttatctgtg aaaatatatc tatatcatct aaatatcaaa CD 3401 caatctctga atccggtcaa attatagcta ttcatccgga atttctggta CD 3451 gttagactag ctaaaccctc tttagccact ggaggagcca ctattcatag CD 3501 tcattatgga caaattataa aaaaaggaga tgtttCaata accttagtat CD 3551 atgaaaggtt aaaatctggt gatattattc agggtcttcc taaagttgag CD 3601 Taattattag aagctTgtcc aattaattct acttcaataa atttagaaaa CD 3651 tggatttgag aattggaata gagatatgac gaaatctctt ggaagtcttt CD 3701 ggggattcct ccttagtgct aaaacaacca tgaaccaaag tcaaattaac CD 3751 ttagtcgatc aaattcagga ggttCatTag tcacaaggag tatatatatc CD 3801 agataagcat atagaaattg ttgtgcgtca aatgacatca aaagttctta CD 3851 ctttagaaga tggaatggct aatggttCtt tacccggaga attgattgaa CD 3901 tcttcaaggg cacaaaggat gaatcgtgtt tCagaagaat cagttcttta CD 3951 taaacctata ttattaggaa taacaaaggc gtctctcaat actcagagtt CD 4001 ttatatcgga agccagttCt caagaaacta cccgagtatt agccaaagcc CD 4051 gctcttcgag gtcgaattga ctggttaaaa gggttaaaag aaaatgttat CD 4101 ttttggtggc gtaatctccg ccggtactgg atgtcaagaa gtagtgtggc CD 4151 aagtaatttt agaaaaacgg aaagagactt attcgaaaag aaaaaagaat CD 4201 aaacttttca gtggaagagt tcgagatgtt ttctcctatt accaaagaat CD 4251 cttatttttt cctactatga agattattca taaaacattg aagaaaccat CD 4301 tatcggaaat aaatcttgac cctaattatc ggaagtaa FT EDITED CDNA CD 1 gtggcagaat cagctaaatt gctattTtat aataaagtaa tagatggaac CD 51 tgccataaaa caatttattg gcagattagt agctcacttt ggaattacat CD 101 atacagctca cattttggat caacTtaaaa ctctgggttt tCaacaagct CD 151 acttatgccg ctacttcatt aggcattgac gatctcttaa cagcacCgtc CD 201 aaagggatgg ctcattcaag atgcggaaca tcatagttat actttggaga CD 251 agcatcatcg ctatgggaat gtacatgctg Tggaaaaatt acgtcaactc CD 301 attgaaacat ggtatgctac gagtgagtat tTaaaaCaag aaatgaatcc CD 351 taatttcaga atgactgatc ccttaaatcc ggtacatatg atgtcttttt CD 401 caggagctCg aggaagtgca tcaCaagttC atcaattagt aggtatgaga CD 451 ggattagtgt cagatCCtCa gggacaaatt attgatttac ctattaagag CD 501 taatttccgc gagggattat ctttgaccga atatattatt tcttgttacg CD 551 gtgctcgtaa aggagttgtt gatactgccg tgCgaacatC agatgctgga CD 601 taccttacaC gcagactcgt tgaagtggtt caacatattg tagtacgtaa CD 651 aacagattgt aatacttttC gaggtatttc tttgaattct accgaagata CD 701 agaagaaaaa tttacaaata tttactcagc aaaaactagt gggtcgtgta CD 751 ctagcagata atttatatat aaatgcaaga tgtcttgcta tacgtaatca CD 801 agatattaat actaatctta ttgaaaaatT aataactctt aaaacaccat CD 851 taatttcaat acgatctccc ttgacttgca aaagtatgct ttggatttgt CD 901 caattatgct atggatggag tcttactcac tacggtgatt tagtagaatt CD 951 gggagaagct gtgggtatta tagcaggcCa atCtatcggg gaaccaggaa CD 1001 ctcaactaac attaaggact tTccatacgg gtggagtttT cacaggtgac CD 1051 attgcagaac atgtaCgaac cccttttaat gggactattg aattcgatac CD 1101 agatttagtt tatcccacaa gaacacgtca cggtcacccc gcttgggtat CD 1151 gtcgtaccga tctagctgtt actataaaaa gtcagaataa gatacataat CD 1201 ttgatcatcc catctcaaag tctactctta attcaaaaca atcaatatgt CD 1251 agaatcgaaa caacttattg cggaagttca tgctaaggta tctCctttca CD 1301 aagaaaaggt tcagaaatac atttattgta acatagaagg ggaaatgcac CD 1351 tggagtaaaa gggtacgtca tgcttctaaa tatttacata gtaatgttca CD 1401 tttaatattt aatacgggtc acttatggat attatcagga agttctcatg CD 1451 aagataaaac atcctctatg tttttcaaaa atcaggatca aatcaataca CD 1501 aaatttttca tttctccacg taagatactt tttatgaaaa agactaatca CD 1551 agttaattca aaaaatcttg atccttattt agaaaaagaa atggaaactc CD 1601 taaattattc gaatctctat cttggtatac taaacaagag taggaacttc CD 1651 gtatatccca gtattatttt acatgattat gaggtaaaga gaatttatga CD 1701 tgaaaaaaaa ggcgaaaatt ttcttttatt ggaggaaaga catggagaaa CD 1751 aaaaaacaca aatttttcgt cgatttgttc ttaacatacc aaaaagtgga CD 1801 attttagaaa ataaggatat ttTtgccatt tcaaatgaCc ctggatacgg CD 1851 aattcaaagc Ccaggaatta taaaatatgg tactataaaa gtcaaCccaa CD 1901 ttaaaggaaa aggagaaact tttaagaatc gagaaacgaa aattttaaga CD 1951 cttcgaccga gatatcaagt aattgaacca ggaaattttt ttcCcattcc CD 2001 tgaagaagtg cacatttTat atgaatcttt tccaCctatc ttagtacgaa CD 2051 atgatagCct tataaaaaaa aatacacaaa ttacttcgga tattaggagc CD 2101 caagtaggtg gattagttag aataagaaga aagatgaatg atagttacga CD 2151 ggtaaaagta ttacctggCc gtgtataCca tcccgaagag agacgaaaca CD 2201 tatctaaaca aaatgacatt ttggtaccac cgggagaaga aatttctaat CD 2251 aagtttcaat ctgaaaattg gctttatctt gagtggatta caccccctaa CD 2301 agaaaaacct ttcattttca ttagacctgc aattgaattt atagtacctg CD 2351 aagaaacaga tttagcagaa acgtttactc Taaattcaca aaagaaacaa CD 2401 gaaattttga aagtaaaaaa gattcgatat cttctctacg aagatggtga CD 2451 ggaagttgaa gttacgaata aaactggtat tcaattaatt Caaactggtc CD 2501 tagttctgga ttggaaagaa gattcttcta taaaaaaagt ttatgcttct CD 2551 cttactgaaa tagagacaaa tggattatca aaaaaatttc ttcaaattag CD 2601 cttgatagaa caccctattt ttgagataga aaagaagaag aataatgtca CD 2651 atctaaaata cttattcact aatgaaatta attattctag tcactctttc CD 2701 aattatgaaa atggattatt caatgggtat cgaggcatca ttcgtatctc CD 2751 atctaatgaa aatCaagaag ataaatctct tcccatttta tccccttttg CD 2801 attttgtcca aattttccta tctaaaaatt cagaggagta tactccggaa CD 2851 atgaaagatg aaggaaattt caatttagat accaattcta ttttttacgc CD 2901 caaatctttt gttaaaaaat ttaatcaaaa ttcaattact tctagtcaaa CD 2951 attcttctgg tacttttatt aataaagaat tttataatca taataatata CD 3001 aatcaggaat tcaattcaag aaaaataatt agaaattttt ttctatcaat CD 3051 tgaaagaaat tttatggaaa tacttttact gagaaagtta ggtcttctag CD 3101 gtaattcaca tagtttgccg agcccttttc aattctcttg ttgggcaaat CD 3151 actcataatc aacctatcat taataggtat tcaatacttg aaaatttaag CD 3201 agatgttttt caagttccaa aatggtattt ttttgatgag aataaaaaga CD 3251 cacataaatt agatttatct aaaaattcaa tctatcattt attaacttgg CD 3301 tctttttcta tcgccctttc atatgaagaa ggagcaattc atttagtagg CD 3351 ccttggacaa tttatctgtg aaaatatatc tatatcatct aaatatcaaa CD 3401 caatctctga atccggtcaa attatagcta ttcatccgga atttctggta CD 3451 gttagactag ctaaaccctc tttagccact ggaggagcca ctattcatag CD 3501 tcattatgga caaattataa aaaaaggaga tgtttTaata accttagtat CD 3551 atgaaaggtt aaaatctggt gatattattc agggtcttcc taaagttgag CD 3601 Caattattag aagctCgtcc aattaattct acttcaataa atttagaaaa CD 3651 tggatttgag aattggaata gagatatgac gaaatctctt ggaagtcttt CD 3701 ggggattcct ccttagtgct aaaacaacca tgaaccaaag tcaaattaac CD 3751 ttagtcgatc aaattcagga ggttTatCag tcacaaggag tatatatatc CD 3801 agataagcat atagaaattg ttgtgcgtca aatgacatca aaagttctta CD 3851 ctttagaaga tggaatggct aatggttTtt tacccggaga attgattgaa CD 3901 tcttcaaggg cacaaaggat gaatcgtgtt tTagaagaat cagttcttta CD 3951 taaacctata ttattaggaa taacaaaggc gtctctcaat actcagagtt CD 4001 ttatatcgga agccagttTt caagaaacta cccgagtatt agccaaagcc CD 4051 gctcttcgag gtcgaattga ctggttaaaa gggttaaaag aaaatgttat CD 4101 ttttggtggc gtaatctccg ccggtactgg atgtcaagaa gtagtgtggc CD 4151 aagtaatttt agaaaaacgg aaagagactt attcgaaaag aaaaaagaat CD 4201 aaacttttca gtggaagagt tcgagatgtt ttctcctatt accaaagaat CD 4251 cttatttttt cctactatga agattattca taaaacattg aagaaaccat CD 4301 tatcggaaat aaatcttgac cctaattatc ggaagtaa SQ SEQUENCE 1446 AA; VAESAKLLFY NKVIDGTAIK QFIGRLVAHF GITYTAHILD QLKTLGFQQA TYAATSLGID DLLTAPSKGW LIQDAEHHSY TLEKHHRYGN VHAVEKLRQL IETWYATSEY LKQEMNPNFR MTDPLNPVHM MSFSGARGSA SQVHQLVGMR GLVSDPQGQI IDLPIKSNFR EGLSLTEYII SCYGARKGVV DTAVRTSDAG YLTRRLVEVV QHIVVRKTDC NTFRGISLNS TEDKKKNLQI FTQQKLVGRV LADNLYINAR CLAIRNQDIN TNLIEKLITL KTPLISIRSP LTCKSMLWIC QLCYGWSLTH YGDLVELGEA VGIIAGQSIG EPGTQLTLRT FHTGGVFTGD IAEHVRTPFN GTIEFDTDLV YPTRTRHGHP AWVCRTDLAV TIKSQNKIHN LIIPSQSLLL IQNNQYVESK QLIAEVHAKV SPFKEKVQKY IYCNIEGEMH WSKRVRHASK YLHSNVHLIF NTGHLWILSG SSHEDKTSSM FFKNQDQINT KFFISPRKIL FMKKTNQVNS KNLDPYLEKE METLNYSNLY LGILNKSRNF VYPSIILHDY EVKRIYDEKK GENFLLLEER HGEKKTQIFR RFVLNIPKSG ILENKDIFAI SNDPGYGIQS PGIIKYGTIK VNPIKGKGET FKNRETKILR LRPRYQVIEP GNFFPIPEEV HILYESFPPI LVRNDSLIKK NTQITSDIRS QVGGLVRIRR KMNDSYEVKV LPGRVYHPEE RRNISKQNDI LVPPGEEISN KFQSENWLYL EWITPPKEKP FIFIRPAIEF IVPEETDLAE TFTLNSQKKQ EILKVKKIRY LLYEDGEEVE VTNKTGIQLI QTGLVLDWKE DSSIKKVYAS LTEIETNGLS KKFLQISLIE HPIFEIEKKK NNVNLKYLFT NEINYSSHSF NYENGLFNGY RGIIRISSNE NQEDKSLPIL SPFDFVQIFL SKNSEEYTPE MKDEGNFNLD TNSIFYAKSF VKKFNQNSIT SSQNSSGTFI NKEFYNHNNI NQEFNSRKII RNFFLSIERN FMEILLLRKL GLLGNSHSLP SPFQFSCWAN THNQPIINRY SILENLRDVF QVPKWYFFDE NKKTHKLDLS KNSIYHLLTW SFSIALSYEE GAIHLVGLGQ FICENISISS KYQTISESGQ IIAIHPEFLV VRLAKPSLAT GGATIHSHYG QIIKKGDVLI TLVYERLKSG DIIQGLPKVE QLLEARPINS TSINLENGFE NWNRDMTKSL GSLWGFLLSA KTTMNQSQIN LVDQIQEVYQ SQGVYISDKH IEIVVRQMTS KVLTLEDGMA NGFLPGELIE SSRAQRMNRV LEESVLYKPI LLGITKASLN TQSFISEASF QETTRVLAKA ALRGRIDWLK GLKENVIFGG VISAGTGCQE VVWQVILEKR KETYSKRKKN KLFSGRVRDV FSYYQRILFF PTMKIIHKTL KKPLSEINLD PNYRK* // ID AB086179_7 STANDARD; PRT; 236 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55329.1 FT PROTEIN_NAME : ribosomal protein S2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 14187 - 14894 FT DIRECTIONS : positive FT EDITING : 5 Y(taT) -> Y(taC) FT EDITING : 29 L(cTT) -> P(cCC) FT EDITING : 36 S(tCc) -> F(tTc) FT EDITING : 53 F(Ttc) -> L(Ctc) FT EDITING : 105 S(tCa) -> L(tTa) FT EDITING : 121 P(cCa) -> L(cTa) FT EDITING : 162 L(cTa) -> P(cCa) FT EDITING : 166 T(aCa) -> I(aTa) FT EDITING : 170 *(Taa) -> Q(Caa) FT EDITING : 171 *(Taa) -> Q(Caa) FT EDITING : 183 S(tCa) -> L(tTa) FT EDITING : 197 S(Tca) -> P(Cca) FT EDITING : 213 L(tTa) -> S(tCa) FT EDITING : 214 T(aCt) -> I(aTt) FT EDITING : 218 S(tCg) -> L(tTg) FT EDITING : 221 S(tCa) -> L(tTa) FT EDITING : 225 T(aCt) -> I(aTt) FT EDITING : 226 *(Tag) -> Q(Cag) FT CODON_START : 1 CL CDNALEN 708 NT; CD 1 atgaaacaaa aataTtggaa cattaatttg gaagaaatga tggaagcagg CD 51 aattcatttt ggtcatcaag ctgcaaagtg gaatcTTaaa atgaaacctt CD 101 atatctCcac agaacgtagg ggcattcata tcctaaatgt tactaaaacg CD 151 gctagaTtct tatcagaagc ctgtgatttt gttgctaatg ctgcgagtaa CD 201 agggaagcag tttttaatag taggtacaaa atatcaagca gctgatttag CD 251 tagcatcagc tgctctaaag gctcgatgtc attatgtaaa tcaaaagtgg CD 301 cttggtggaa tgtCaacaaa ttggtctact atagaaaaac gtttacggaa CD 351 atttgaagac cCacaaacga agaaaaatat gggagcgctt gatgagcttc CD 401 cgaaaaaaga agcagccaat ttggaaagac aattggctca actgcaaaaa CD 451 tatttaggtg ggattaggta tatgacaaac ttacTagata ttgttaCaat CD 501 tgtggacTaa Taaaaagaat taacagctat tcgggaatgt attaattCaa CD 551 atattccaac tatttgttta gttgatacag attgcgatTc agatcttacg CD 601 gatatctcaa ttccagcaaa tgatgatgct agagcttTaa Ctagatgggt CD 651 ttCggataaa tCaacttcag ctaCtTagga aggtcgttgt aattctacga CD 701 aaatctga FT EDITED CDNA CD 1 atgaaacaaa aataCtggaa cattaatttg gaagaaatga tggaagcagg CD 51 aattcatttt ggtcatcaag ctgcaaagtg gaatcCCaaa atgaaacctt CD 101 atatctTcac agaacgtagg ggcattcata tcctaaatgt tactaaaacg CD 151 gctagaCtct tatcagaagc ctgtgatttt gttgctaatg ctgcgagtaa CD 201 agggaagcag tttttaatag taggtacaaa atatcaagca gctgatttag CD 251 tagcatcagc tgctctaaag gctcgatgtc attatgtaaa tcaaaagtgg CD 301 cttggtggaa tgtTaacaaa ttggtctact atagaaaaac gtttacggaa CD 351 atttgaagac cTacaaacga agaaaaatat gggagcgctt gatgagcttc CD 401 cgaaaaaaga agcagccaat ttggaaagac aattggctca actgcaaaaa CD 451 tatttaggtg ggattaggta tatgacaaac ttacCagata ttgttaTaat CD 501 tgtggacCaa Caaaaagaat taacagctat tcgggaatgt attaattTaa CD 551 atattccaac tatttgttta gttgatacag attgcgatCc agatcttacg CD 601 gatatctcaa ttccagcaaa tgatgatgct agagcttCaa Ttagatgggt CD 651 ttTggataaa tTaacttcag ctaTtCagga aggtcgttgt aattctacga CD 701 aaatctga SQ SEQUENCE 236 AA; MKQKYWNINL EEMMEAGIHF GHQAAKWNPK MKPYIFTERR GIHILNVTKT ARLLSEACDF VANAASKGKQ FLIVGTKYQA ADLVASAALK ARCHYVNQKW LGGMLTNWST IEKRLRKFED LQTKKNMGAL DELPKKEAAN LERQLAQLQK YLGGIRYMTN LPDIVIIVDQ QKELTAIREC INLNIPTICL VDTDCDPDLT DISIPANDDA RASIRWVLDK LTSAIQEGRC NSTKI* // ID AB086179_8 STANDARD; PRT; 249 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : atpI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55330.1 FT PROTEIN_NAME : ATPase synthase IV subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 15107 - 15853 FT DIRECTIONS : positive FT EDITING : 24 *(Taa) -> Q(Caa) FT EDITING : 36 Y(Tat) -> H(Cat) FT EDITING : 38 *(Tag) -> Q(Cag) FT EDITING : 40 P(cCt) -> L(cTt) FT EDITING : 44 R(Cgg) -> W(Tgg) FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 55 T(aCt) -> I(aTt) FT EDITING : 59 *(Tag) -> Q(Cag) FT EDITING : 86 *(Taa) -> Q(Caa) FT EDITING : 105 P(CCc) -> F(TTc) FT EDITING : 106 T(aCt) -> I(aTt) FT EDITING : 115 P(cCc) -> L(cTc) FT EDITING : 141 S(tCa) -> L(tTa) FT EDITING : 146 P(Cca) -> S(Tca) FT EDITING : 184 L(cTt) -> P(cCt) FT EDITING : 220 S(tCa) -> L(tTa) FT EDITING : 228 *(Taa) -> Q(Caa) FT EDITING : 232 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 747 NT; CD 1 atgtatagtg cacaatcttc cattagcaaa ctcactaatt tatgcgagat CD 51 atctagtgtg gaagtaggtT aacatttcta ctggcaaata ggtggttttc CD 101 aggttTatgc aTaggtacCt ataacttccC ggatcgttat tgcaatttta CD 151 ttaggttCag ctaCtttagc cactTagaat ttacagacta ttccaactag CD 201 tggtcaaaac tttgtcgaat atattttaga attcattcga gatttgacta CD 251 gaactTaaat aggagaagag gaataccgtc cttgggttcc tttcattgga CD 301 actatgtttc ttCCcaCttt cgtttctaat tggtcaggcg ctcCcctccc CD 351 ctggagaatt tttgaattac ctcacggaga attagctgca cctacaaatg CD 401 atattaatac tactgttgct tCagctttgc ctacaCcagt agcatatttc CD 451 tatgcaggtc ttcgtaaaaa aggtttaagt tattctggta agtatattca CD 501 accaaccccg atacttctac cgatcaatat tctagaagat ttcactaaac CD 551 Ttttaccact tagttttcga ctctttggaa atatattagc tgatgagtta CD 601 gtagttgctg ttcctatttc tttagtacct ctagttgttc ctatacctat CD 651 gatgttttCa ggactattca caagtgctat tTaagcttta atttCtgcga CD 701 ctttagctgc agcttatatt ggagaatcaa tggagggtca tcattaa FT EDITED CDNA CD 1 atgtatagtg cacaatcttc cattagcaaa ctcactaatt tatgcgagat CD 51 atctagtgtg gaagtaggtC aacatttcta ctggcaaata ggtggttttc CD 101 aggttCatgc aCaggtacTt ataacttccT ggatcgttat tgcaatttta CD 151 ttaggttTag ctaTtttagc cactCagaat ttacagacta ttccaactag CD 201 tggtcaaaac tttgtcgaat atattttaga attcattcga gatttgacta CD 251 gaactCaaat aggagaagag gaataccgtc cttgggttcc tttcattgga CD 301 actatgtttc ttTTcaTttt cgtttctaat tggtcaggcg ctcTcctccc CD 351 ctggagaatt tttgaattac ctcacggaga attagctgca cctacaaatg CD 401 atattaatac tactgttgct tTagctttgc ctacaTcagt agcatatttc CD 451 tatgcaggtc ttcgtaaaaa aggtttaagt tattctggta agtatattca CD 501 accaaccccg atacttctac cgatcaatat tctagaagat ttcactaaac CD 551 Ctttaccact tagttttcga ctctttggaa atatattagc tgatgagtta CD 601 gtagttgctg ttcctatttc tttagtacct ctagttgttc ctatacctat CD 651 gatgttttTa ggactattca caagtgctat tCaagcttta atttTtgcga CD 701 ctttagctgc agcttatatt ggagaatcaa tggagggtca tcattaa SQ SEQUENCE 249 AA; MYSAQSSISK LTNLCEISSV EVGQHFYWQI GGFQVHAQVL ITSWIVIAIL LGLAILATQN LQTIPTSGQN FVEYILEFIR DLTRTQIGEE EYRPWVPFIG TMFLFIFVSN WSGALLPWRI FELPHGELAA PTNDINTTVA LALPTSVAYF YAGLRKKGLS YSGKYIQPTP ILLPINILED FTKPLPLSFR LFGNILADEL VVAVPISLVP LVVPIPMMFL GLFTSAIQAL IFATLAAAYI GESMEGHH* // ID AB086179_9 STANDARD; PRT; 82 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : atpH FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55331.1 FT PROTEIN_NAME : ATPase III subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 16730 - 16975 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 11 T(aCt) -> I(aTt) FT EDITING : 21 F(tTt) -> S(tCt) FT EDITING : 24 F(TTt) -> P(CCt) FT EDITING : 34 *(Taa) -> Q(Caa) FT EDITING : 40 V(gTt) -> A(gCt) FT EDITING : 42 *(Taa) -> Q(Caa) FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 55 S(tCa) -> L(tTa) FT EDITING : 59 S(tCt) -> F(tTt) FT EDITING : 70 A(gCa) -> V(gTa) FT EDITING : 74 P(cCt) -> L(cTt) FT EDITING : 75 P(CCa) -> L(TTa) FT EDITING : 76 S(tCt) -> F(tTt) FT EDITING : 80 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 246 NT; CD 1 aCgaaccctt tgatttctgc tgcttccgtt aCtgctgctg gattagctgt CD 51 gggtcttgct tTtattggaT Ttggtgttgg gcagggtact gctgcaggtT CD 101 aagctgtgga aggtattgTt agaTaacctg aagcagaagg taaaatacga CD 151 ggtacttCat tgtCaagctt agcttCtatg gaagctctga ctatttatgg CD 201 tttagtcgCa gctctagcac CtCCatCtgc aaatccttCc gtctaa FT EDITED CDNA CD 1 aTgaaccctt tgatttctgc tgcttccgtt aTtgctgctg gattagctgt CD 51 gggtcttgct tCtattggaC Ctggtgttgg gcagggtact gctgcaggtC CD 101 aagctgtgga aggtattgCt agaCaacctg aagcagaagg taaaatacga CD 151 ggtacttTat tgtTaagctt agcttTtatg gaagctctga ctatttatgg CD 201 tttagtcgTa gctctagcac TtTTatTtgc aaatccttTc gtctaa SQ SEQUENCE 82 AA; MNPLISAASV IAAGLAVGLA SIGPGVGQGT AAGQAVEGIA RQPEAEGKIR GTLLLSLAFM EALTIYGLVV ALALLFANPF V* // ID AB086179_10 STANDARD; PRT; 185 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : atpF FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55332.1 FT PROTEIN_NAME : ATPase I subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 49/1 FT EDITING : 6 S(tCt) -> F(tTt) FT EDITING : 7 L(Ctt) -> F(Ttt) FT EDITING : 30 N(aaT) -> N(aaC) FT EDITING : 71 Y(taT) -> Y(taC) FT EDITING : 78 P(cCt) -> L(cTt) FT EDITING : 139 *(Taa) -> Q(Caa) FT EDITING : 156 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 555 NT; CD 1 atgagaaatt tgatttCtCt tgttattcct tttcattttt ggcttcctgc CD 51 agagggtttt aaactaaata caaatctttt agaaacaaaT ttaatcaatt CD 101 taggtgttgt gcttggttta ttagtttact ttggaaaggg agtgttaaat CD 151 aatttattag ataagcgtaa acagacgatt ttaagtacta ttcgcgatgc CD 201 agaggaacgg taTaaagaag ctactgataa acCtaaacaa gcccagattc CD 251 gtttgcaaca agctgaatta aaagcaaatg aaattcgagt caatggactt CD 301 tctgaaatgg aaaaagaaaa acaggattta attaatattg ctgatgaaga CD 351 ttcaaaacgt ttagaagatt ctaaaaatgc tactattcgt ttcgaagaac CD 401 agagagcaat tgagTaagtt agacaacagg tttctcgtct cgcattagaa CD 451 agagcttcag aagtttCaaa caattgttta aatagcgaat tgcattcacg CD 501 catgattgac tatcatattg gtctgcttaa gaccatggga agcacaactg CD 551 aatag FT EDITED CDNA CD 1 atgagaaatt tgatttTtTt tgttattcct tttcattttt ggcttcctgc CD 51 agagggtttt aaactaaata caaatctttt agaaacaaaC ttaatcaatt CD 101 taggtgttgt gcttggttta ttagtttact ttggaaaggg agtgttaaat CD 151 aatttattag ataagcgtaa acagacgatt ttaagtacta ttcgcgatgc CD 201 agaggaacgg taCaaagaag ctactgataa acTtaaacaa gcccagattc CD 251 gtttgcaaca agctgaatta aaagcaaatg aaattcgagt caatggactt CD 301 tctgaaatgg aaaaagaaaa acaggattta attaatattg ctgatgaaga CD 351 ttcaaaacgt ttagaagatt ctaaaaatgc tactattcgt ttcgaagaac CD 401 agagagcaat tgagCaagtt agacaacagg tttctcgtct cgcattagaa CD 451 agagcttcag aagtttTaaa caattgttta aatagcgaat tgcattcacg CD 501 catgattgac tatcatattg gtctgcttaa gaccatggga agcacaactg CD 551 aatag SQ SEQUENCE 185 AA; MRNLIFFVIP FHFWLPAEGF KLNTNLLETN LINLGVVLGL LVYFGKGVLN NLLDKRKQTI LSTIRDAEER YKEATDKLKQ AQIRLQQAEL KANEIRVNGL SEMEKEKQDL INIADEDSKR LEDSKNATIR FEEQRAIEQV RQQVSRLALE RASEVLNNCL NSELHSRMID YHIGLLKTMG STTE* // ID AB086179_11 STANDARD; PRT; 508 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : atpA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55333.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 18663 - 20186 FT DIRECTIONS : positive FT EDITING : 22 *(Tag) -> Q(Cag) FT EDITING : 41 C(Tgt) -> R(Cgt) FT EDITING : 56 S(tCt) -> F(tTt) FT EDITING : 76 S(tCa) -> L(tTa) FT EDITING : 105 S(tCa) -> L(tTa) FT EDITING : 107 C(Tgt) -> R(Cgt) FT EDITING : 109 A(gCa) -> V(gTa) FT EDITING : 135 L(cTc) -> P(cCc) FT EDITING : 146 L(cTa) -> P(cCa) FT EDITING : 160 T(aCt) -> I(aTt) FT EDITING : 162 C(Tgc) -> R(Cgc) FT EDITING : 246 S(tCa) -> L(tTa) FT EDITING : 250 S(tCc) -> F(tTc) FT EDITING : 258 S(tCa) -> L(tTa) FT EDITING : 267 *(Taa) -> Q(Caa) FT EDITING : 269 *(Taa) -> Q(Caa) FT EDITING : 331 T(aCt) -> I(aTt) FT EDITING : 350 S(tCt) -> F(tTt) FT EDITING : 378 *(Taa) -> Q(Caa) FT EDITING : 383 P(cCt) -> L(cTt) FT EDITING : 425 *(Taa) -> Q(Caa) FT EDITING : 446 S(tCg) -> L(tTg) FT EDITING : 453 *(Taa) -> Q(Caa) FT EDITING : 494 T(aCt) -> I(aTt) FT EDITING : 502 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1524 NT; CD 1 atggtaaaca ttcgacccga cgaaattagc aatattattc gtaagcaaat CD 51 tgagcagtat aatTaggaag tcaaagttat caatatcggt actgtacttc CD 101 aggtaggaga tggtattgca Tgtatatacg gtctcgataa agttatggcc CD 151 ggtgaattgg tagaatCtga agatggcact gtaggcattg ccttaaattt CD 201 ggaatctgac aatgttggag ttgtttCaat gggagatgga ttgagtattc CD 251 aggaaggtag ctccgtagaa gcaacaggta aaattgctca aattccagta CD 301 agtgatgcct attCaggtTg tgtcgCaaat gcgttagccc aacctatcga CD 351 tggtaagggt caaataccag cttacgaatt cagactcatc gaatctcccg CD 401 ctcTcggtat aatttcaaga cgttctgtat atgaacTaat gcaaacagga CD 451 cttattgcta ttgattctat gattcctaCt ggaTgcggtc agcgagaatt CD 501 aattattgga gatagacaga ctggtaaaac agcagtagca acagatacta CD 551 ttctaaatca gaaaggtcaa aatgtaatat gtgtctatgt tgctattggg CD 601 caaaaagcct cttccgtagc tcaagtagtt aatacttttg aggaacgtgg CD 651 tgcattggaa tatactattg tagtagcaga aactgcagat tctcccgcta CD 701 ctttgcagta tcttgccccc tatacaggag cagcttCagc agaatactCc CD 751 atgtatcgta aacaacatac ttCaattatt tatgatgatc tttctaaaTa CD 801 agcaTaagct tatcgacaga tgtctctctt attaagaagg ccaccgggtc CD 851 gagaagcata cccaggagat gttttttacc tgcattcccg tctcttggaa CD 901 agagctgcta agttgagttc gcaattaggt gaaggaagta tgactgcttt CD 951 gcctatagtt gaaactcaag caggagatgt ttcagcttat aCtcccacta CD 1001 atgtaatttc tataacagat ggacaaatat ttttatcagc cgatttatCt CD 1051 aatgcaggaa ttcgtcccgc gattaatgta ggtatttctg tatccagagt CD 1101 gggatctgca gctcagatta aagctatgaa aTaagtggct ggaaagcCta CD 1151 aattagaatt agctcaattc gcagaattag aagcttttgc acaatttgcc CD 1201 tctgatctag ataaagctac gcagaatcaa ttagcaaggg gtcaacgttt CD 1251 acgtgaatta cttaagcaat ctTaatcagc tcctcttgct gtggaagaac CD 1301 aagtagctac tatttatact ggagtaaatg gatattCgga tgtattggaa CD 1351 gtagaaTaag taaagaaatt tcttgttcaa ttacgtgaat atttaataac CD 1401 aaataaacct caatttgttg agattatacg ttctactaag gttttcacag CD 1451 aacaagctga gattatttta aaagaagcta Ctaaggaaca tactgagttt CD 1501 ttttCacttc aagaacaaaa gtaa FT EDITED CDNA CD 1 atggtaaaca ttcgacccga cgaaattagc aatattattc gtaagcaaat CD 51 tgagcagtat aatCaggaag tcaaagttat caatatcggt actgtacttc CD 101 aggtaggaga tggtattgca Cgtatatacg gtctcgataa agttatggcc CD 151 ggtgaattgg tagaatTtga agatggcact gtaggcattg ccttaaattt CD 201 ggaatctgac aatgttggag ttgtttTaat gggagatgga ttgagtattc CD 251 aggaaggtag ctccgtagaa gcaacaggta aaattgctca aattccagta CD 301 agtgatgcct attTaggtCg tgtcgTaaat gcgttagccc aacctatcga CD 351 tggtaagggt caaataccag cttacgaatt cagactcatc gaatctcccg CD 401 ctcCcggtat aatttcaaga cgttctgtat atgaacCaat gcaaacagga CD 451 cttattgcta ttgattctat gattcctaTt ggaCgcggtc agcgagaatt CD 501 aattattgga gatagacaga ctggtaaaac agcagtagca acagatacta CD 551 ttctaaatca gaaaggtcaa aatgtaatat gtgtctatgt tgctattggg CD 601 caaaaagcct cttccgtagc tcaagtagtt aatacttttg aggaacgtgg CD 651 tgcattggaa tatactattg tagtagcaga aactgcagat tctcccgcta CD 701 ctttgcagta tcttgccccc tatacaggag cagcttTagc agaatactTc CD 751 atgtatcgta aacaacatac ttTaattatt tatgatgatc tttctaaaCa CD 801 agcaCaagct tatcgacaga tgtctctctt attaagaagg ccaccgggtc CD 851 gagaagcata cccaggagat gttttttacc tgcattcccg tctcttggaa CD 901 agagctgcta agttgagttc gcaattaggt gaaggaagta tgactgcttt CD 951 gcctatagtt gaaactcaag caggagatgt ttcagcttat aTtcccacta CD 1001 atgtaatttc tataacagat ggacaaatat ttttatcagc cgatttatTt CD 1051 aatgcaggaa ttcgtcccgc gattaatgta ggtatttctg tatccagagt CD 1101 gggatctgca gctcagatta aagctatgaa aCaagtggct ggaaagcTta CD 1151 aattagaatt agctcaattc gcagaattag aagcttttgc acaatttgcc CD 1201 tctgatctag ataaagctac gcagaatcaa ttagcaaggg gtcaacgttt CD 1251 acgtgaatta cttaagcaat ctCaatcagc tcctcttgct gtggaagaac CD 1301 aagtagctac tatttatact ggagtaaatg gatattTgga tgtattggaa CD 1351 gtagaaCaag taaagaaatt tcttgttcaa ttacgtgaat atttaataac CD 1401 aaataaacct caatttgttg agattatacg ttctactaag gttttcacag CD 1451 aacaagctga gattatttta aaagaagcta Ttaaggaaca tactgagttt CD 1501 ttttTacttc aagaacaaaa gtaa SQ SEQUENCE 508 AA; MVNIRPDEIS NIIRKQIEQY NQEVKVINIG TVLQVGDGIA RIYGLDKVMA GELVEFEDGT VGIALNLESD NVGVVLMGDG LSIQEGSSVE ATGKIAQIPV SDAYLGRVVN ALAQPIDGKG QIPAYEFRLI ESPAPGIISR RSVYEPMQTG LIAIDSMIPI GRGQRELIIG DRQTGKTAVA TDTILNQKGQ NVICVYVAIG QKASSVAQVV NTFEERGALE YTIVVAETAD SPATLQYLAP YTGAALAEYF MYRKQHTLII YDDLSKQAQA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE RAAKLSSQLG EGSMTALPIV ETQAGDVSAY IPTNVISITD GQIFLSADLF NAGIRPAINV GISVSRVGSA AQIKAMKQVA GKLKLELAQF AELEAFAQFA SDLDKATQNQ LARGQRLREL LKQSQSAPLA VEEQVATIYT GVNGYLDVLE VEQVKKFLVQ LREYLITNKP QFVEIIRSTK VFTEQAEIIL KEAIKEHTEF FLLQEQK* // ID AB086179_15 STANDARD; PRT; 56 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbK FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55337.1 FT PROTEIN_NAME : photosystem II K-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 24093 - 24260 FT DIRECTIONS : negative FT EDITING : 17 S(tCa) -> L(tTa) FT EDITING : 20 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 168 NT; CD 1 atgttttata tccatctgga aaatactttt gatttaagta gtactatctC CD 51 agttaaatCa cccgaagctt atgctatttt tgatccaatt gtagatgtaa CD 101 tgccaattat acctctattc ttttttcttt tagcctttgt ttggcaagct CD 151 tctgtaagtt ttcgataa FT EDITED CDNA CD 1 atgttttata tccatctgga aaatactttt gatttaagta gtactatctT CD 51 agttaaatTa cccgaagctt atgctatttt tgatccaatt gtagatgtaa CD 101 tgccaattat acctctattc ttttttcttt tagcctttgt ttggcaagct CD 151 tctgtaagtt ttcgataa SQ SEQUENCE 56 AA; MFYIHLENTF DLSSTILVKL PEAYAIFDPI VDVMPIIPLF FFLLAFVWQA SVSFR* // ID AB086179_16 STANDARD; PRT; 514 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : chlB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55338.1 FT PROTEIN_NAME : protochlorophyllide reductase 58 kDa chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 24839 - 26380 FT DIRECTIONS : positive FT EDITING : 31 Y(Tat) -> H(Cat) FT EDITING : 33 F(TTt) -> P(CCt) FT EDITING : 54 S(Tct) -> P(Cct) FT EDITING : 91 S(tCa) -> L(tTa) FT EDITING : 93 L(cTc) -> P(cCc) FT EDITING : 100 S(tCa) -> L(tTa) FT EDITING : 104 S(tCa) -> L(tTa) FT EDITING : 121 S(tCg) -> L(tTg) FT EDITING : 127 H(Cat) -> Y(Tat) FT EDITING : 128 *(Tga) -> R(Cga) FT EDITING : 133 *(Taa) -> Q(Caa) FT EDITING : 137 *(Tga) -> R(Cga) FT EDITING : 141 *(Taa) -> Q(Caa) FT EDITING : 172 S(tCc) -> F(tTc) FT EDITING : 188 L(Cta) -> L(Tta) FT EDITING : 219 S(tCa) -> L(tTa) FT EDITING : 246 L(cTt) -> P(cCt) FT EDITING : 257 *(Tga) -> R(Cga) FT EDITING : 283 *(Tag) -> Q(Cag) FT EDITING : 284 *(Taa) -> Q(Caa) FT EDITING : 291 V(gTt) -> A(gCt) FT EDITING : 378 T(aCt) -> I(aTt) FT EDITING : 401 L(cTa) -> P(cCa) FT EDITING : 407 L(Ctt) -> F(Ttt) FT EDITING : 472 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1542 NT; CD 1 atgaaattag cttattggat gtacgctggc cctgctcaca ttggaacgct CD 51 tcgggtagcc agttccttta aaaatgttca tgctattatg TatgccTTtt CD 101 taggagatga ctatttcaat gttatgcgtt ccatgttaga aagagaaaga CD 151 gattttactT ctgtaactgc tagtatagtg gatcgacatg ttttagcacg CD 201 tggatctcaa gaaaaagttg ttgataatat tatgagaaaa gataaggaag CD 251 aatgtcctga tttaatcgta tCaacacTca catgtacttc tagtatttCa CD 301 caggaagatt Cacagaattt tgttgataga gcatctatta gtgttaattc CD 351 tgatgtaatt tCggcagatg taaatcatCa tTgagttaat gaacttTaag CD 401 cagcagatTg aactttggaa Taaatagttc gatattactt agataaggct CD 451 cgtagacagg gaaagttgaa tcaatctata acagatgtac cttctgcgaa CD 501 tattattggt atttCcacat taggctttca caaccaacac gattgtcgtg CD 551 aattgaaacg tCtattaaaa gatttaggca taaaaattaa ccaagtaatt CD 601 cctgaagggg gatttgtaga agatttagaa aaattaccaa aagcttggtt CD 651 taattCaatt ccctatcgtg aggtaggctt aatgacggca atttatttgg CD 701 aaaaggaatt tggtatgcct tacgtatcta taactcTtat gggaattgca CD 751 gatattgttc aatgtatcTg acagatacag aaacgcgtta atacatggac CD 801 tcactttttg ttgaatcaaa aacttgatta tgaactttat attgatTagT CD 851 aaacaagatt tatttctcaa gTtgcttggt tttcaagatc catcgattgc CD 901 cagaatttaa caggaaaaaa agcagtggtt tttggtgatg caactcatgc CD 951 cagttcaatg actaagatac ttgctcaaga aatgggaatt cgtgtaagtt CD 1001 gtgcaggtac ttattgtaaa cacgacgcag aatggtttga ggagcaagtt CD 1051 cagggtttct gtgatgagat actcattaca gatgatcata ctcaagttgg CD 1101 agatacaatt gctcgtatag aaccatcagc taCttttggt actcaaatgg CD 1151 aacgtcatat aggtaaacgt cttgatattc cctgcggagt tatttcttca CD 1201 cTagttcata tacagaatCt tcctttaggt tatcgaccct ttttgggcta CD 1251 tgaagggacc aatcaaatag ctgatttggt ttacaattca ttcactttag CD 1301 gtatggaaga tcatctctta gaaatttttg gtggtcatga cactaaagaa CD 1351 gtaataacta aatcattatc gacagataat gatttaactt ggaattcaga CD 1401 aagtcaactt gaatCaaata aaattcctgg ttttgttaga ggtaaaataa CD 1451 aaagaaatac agagagattt gcacgacaaa atggtatcac aggcataaca CD 1501 gtagaagtaa tgtatgctgc taaagaagcc ttaaatgctt ag FT EDITED CDNA CD 1 atgaaattag cttattggat gtacgctggc cctgctcaca ttggaacgct CD 51 tcgggtagcc agttccttta aaaatgttca tgctattatg CatgccCCtt CD 101 taggagatga ctatttcaat gttatgcgtt ccatgttaga aagagaaaga CD 151 gattttactC ctgtaactgc tagtatagtg gatcgacatg ttttagcacg CD 201 tggatctcaa gaaaaagttg ttgataatat tatgagaaaa gataaggaag CD 251 aatgtcctga tttaatcgta tTaacacCca catgtacttc tagtatttTa CD 301 caggaagatt Tacagaattt tgttgataga gcatctatta gtgttaattc CD 351 tgatgtaatt tTggcagatg taaatcatTa tCgagttaat gaacttCaag CD 401 cagcagatCg aactttggaa Caaatagttc gatattactt agataaggct CD 451 cgtagacagg gaaagttgaa tcaatctata acagatgtac cttctgcgaa CD 501 tattattggt atttTcacat taggctttca caaccaacac gattgtcgtg CD 551 aattgaaacg tTtattaaaa gatttaggca taaaaattaa ccaagtaatt CD 601 cctgaagggg gatttgtaga agatttagaa aaattaccaa aagcttggtt CD 651 taattTaatt ccctatcgtg aggtaggctt aatgacggca atttatttgg CD 701 aaaaggaatt tggtatgcct tacgtatcta taactcCtat gggaattgca CD 751 gatattgttc aatgtatcCg acagatacag aaacgcgtta atacatggac CD 801 tcactttttg ttgaatcaaa aacttgatta tgaactttat attgatCagC CD 851 aaacaagatt tatttctcaa gCtgcttggt tttcaagatc catcgattgc CD 901 cagaatttaa caggaaaaaa agcagtggtt tttggtgatg caactcatgc CD 951 cagttcaatg actaagatac ttgctcaaga aatgggaatt cgtgtaagtt CD 1001 gtgcaggtac ttattgtaaa cacgacgcag aatggtttga ggagcaagtt CD 1051 cagggtttct gtgatgagat actcattaca gatgatcata ctcaagttgg CD 1101 agatacaatt gctcgtatag aaccatcagc taTttttggt actcaaatgg CD 1151 aacgtcatat aggtaaacgt cttgatattc cctgcggagt tatttcttca CD 1201 cCagttcata tacagaatTt tcctttaggt tatcgaccct ttttgggcta CD 1251 tgaagggacc aatcaaatag ctgatttggt ttacaattca ttcactttag CD 1301 gtatggaaga tcatctctta gaaatttttg gtggtcatga cactaaagaa CD 1351 gtaataacta aatcattatc gacagataat gatttaactt ggaattcaga CD 1401 aagtcaactt gaatTaaata aaattcctgg ttttgttaga ggtaaaataa CD 1451 aaagaaatac agagagattt gcacgacaaa atggtatcac aggcataaca CD 1501 gtagaagtaa tgtatgctgc taaagaagcc ttaaatgctt ag SQ SEQUENCE 514 AA; MKLAYWMYAG PAHIGTLRVA SSFKNVHAIM HAPLGDDYFN VMRSMLERER DFTPVTASIV DRHVLARGSQ EKVVDNIMRK DKEECPDLIV LTPTCTSSIL QEDLQNFVDR ASISVNSDVI LADVNHYRVN ELQAADRTLE QIVRYYLDKA RRQGKLNQSI TDVPSANIIG IFTLGFHNQH DCRELKRLLK DLGIKINQVI PEGGFVEDLE KLPKAWFNLI PYREVGLMTA IYLEKEFGMP YVSITPMGIA DIVQCIRQIQ KRVNTWTHFL LNQKLDYELY IDQQTRFISQ AAWFSRSIDC QNLTGKKAVV FGDATHASSM TKILAQEMGI RVSCAGTYCK HDAEWFEEQV QGFCDEILIT DDHTQVGDTI ARIEPSAIFG TQMERHIGKR LDIPCGVISS PVHIQNFPLG YRPFLGYEGT NQIADLVYNS FTLGMEDHLL EIFGGHDTKE VITKSLSTDN DLTWNSESQL ELNKIPGFVR GKIKRNTERF ARQNGITGIT VEVMYAAKEA LNA* // ID AB086179_17 STANDARD; PRT; 85 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps16 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55339.1 FT PROTEIN_NAME : ribosomal protein S16 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 14/1 FT EDITING : 38 S(tCC) -> F(tTT) FT EDITING : 56 S(TCt) -> L(CTt) FT EDITING : 57 T(aCt) -> I(aTt) FT EDITING : 71 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 255 NT; CD 1 atggtaaaac ttcgtctaaa gcggtatggt agaaagcaac aaaataccta CD 51 tcgaattgtt gcaattgatg ctcaatctcg gagagaagga cgagctcttg CD 101 aagaagttgg ttCCtataat ttgagaaaag atcaaactca attagatatt CD 151 ttagctattg ttaatTCtaC tagagaaggg gctcaaccta cagaaactgt CD 201 ttatgatatt tCaagaaaag caggaatatt tgaacgaatt aaggctaatc CD 251 cttag FT EDITED CDNA CD 1 atggtaaaac ttcgtctaaa gcggtatggt agaaagcaac aaaataccta CD 51 tcgaattgtt gcaattgatg ctcaatctcg gagagaagga cgagctcttg CD 101 aagaagttgg ttTTtataat ttgagaaaag atcaaactca attagatatt CD 151 ttagctattg ttaatCTtaT tagagaaggg gctcaaccta cagaaactgt CD 201 ttatgatatt tTaagaaaag caggaatatt tgaacgaatt aaggctaatc CD 251 cttag SQ SEQUENCE 85 AA; MVKLRLKRYG RKQQNTYRIV AIDAQSRREG RALEEVGFYN LRKDQTQLDI LAIVNLIREG AQPTETVYDI LRKAGIFERI KANP* // ID AB086179_18 STANDARD; PRT; 52 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ORF51 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55340.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 27724 - 27879 FT DIRECTIONS : positive FT EDITING : 8 A(gCa) -> V(gTa) FT EDITING : 21 L(Cta) -> L(Tta) FT EDITING : 23 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 156 NT; CD 1 atgaatttaa tatttggttt tgCacaatta ttcctctatc accctctttt CD 51 cctcctactt CtatacaCtt atttagttct ttttattcca ctaaaaggtg CD 101 caattaatat aaccaatatt ttcccaactt tacttaaatc catagggata CD 151 aaataa FT EDITED CDNA CD 1 atgaatttaa tatttggttt tgTacaatta ttcctctatc accctctttt CD 51 cctcctactt TtatacaTtt atttagttct ttttattcca ctaaaaggtg CD 101 caattaatat aaccaatatt ttcccaactt tacttaaatc catagggata CD 151 aaataa SQ SEQUENCE 52 AA; MNLIFGFVQL FLYHPLFLLL LYIYLVLFIP LKGAINITNI FPTLLKSIGI K* // ID AB086179_21 STANDARD; PRT; 2393 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ycf2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55342.1 FT PROTEIN_NAME : Ycf2 protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 33690 - 40868 FT DIRECTIONS : positive FT EDITING : 344 *(Tag) -> Q(Cag) FT EDITING : 744 *(Tag) -> Q(Cag) FT EDITING : 861 *(Tga) -> R(Cga) FT EDITING : 1131 *(Taa) -> Q(Caa) FT EDITING : 1255 *(Taa) -> Q(Caa) FT EDITING : 1687 P(cCt) -> L(cTt) FT EDITING : 1748 S(tCt) -> F(tTt) FT EDITING : 1805 *(Tga) -> R(Cga) FT EDITING : 2158 *(Taa) -> Q(Caa) FT EDITING : 2307 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 7179 NT; CD 1 atgaaacaga aattattaga aaacaaattt tcatacagga aattcaaatt CD 51 agaagaaata aagaaatatg aatatttatt aaattcatgt attaactgga CD 101 atttaatcaa attagtaact ggaattcctt ccaatcggga acatctcatt CD 151 aagctctttg acttacgaat tcttagttca ttaattttac gcgatttacg CD 201 taagtcagaa atgaaaaaaa gtttaatact taagagtttt ccactactta CD 251 tactatctat gtttatacat cgtatgaata gtaggaatat tgttgaaata CD 301 aataattgtc atttagagag aataatttat ggaggtataa actacagaga CD 351 aggaagagat gagatatcga ggagatattt gcattctttc atgaaaaatt CD 401 tctctattcc tttgaattac cctttttcta caaagaaagg acgagaaaga CD 451 tatacaaata acttactaag acaaaaaaaa catatttggg tttttaaacg CD 501 gaatctatta gggaaaaaat atataaaacc tgtatatgac aagattgatt CD 551 tctataattt tgaagaatgg aaaactctaa ttataaaaga aattcttcct CD 601 agttggaaaa tttctaatca gtccatagat aaggctaata ttttattgga CD 651 agataagaat atagaagatt taaagcattt ctttgaatta tatgttgatg CD 701 atataattcg tagagactat cattggaaaa actctctaga cattatctct CD 751 tatcgtgata gaaagaacca ggttaatttc aatttgaaga ataatttgga CD 801 attcttagat aaaaaattat tttattgtct tatatctgct ttttgtgaaa CD 851 aagttttatc tgaagtagaa ggtccattta aacataaaag aatcaaatca CD 901 actttcaatt tgaaaaatat tgaagatttt tcggatttcg aagtaactaa CD 951 taaagaaata ttcaaatggg aactacactg gtggaagaaa aaaatctttc CD 1001 aatttttaga taaaaatcat gaatctgatT agagtatagc caaatctttt CD 1051 acttttttcc aaaataagag gtttctcttt ctcgaaaatt atgctgaatt CD 1101 ttatacatgg ctactctacg aggattcccc ctttcatttg aaaaagaata CD 1151 agcaactttt ggatactgcc aaagatacgt ttaaagaaga ttcttttcaa CD 1201 ttaaatgata gaagaaatca aatttattct tttgaaaata aaggtatatt CD 1251 tctgaatatt ctacataatt tttcgattta tgtttcaaat aaagtaagaa CD 1301 aattgaatca tttaaaaata ttttctgata tatctataaa aaattcatat CD 1351 ttgattaata aaaatttagt atatcatgga aaaggaagtg gtggaacaat CD 1401 ctatgaagat gagaaacaaa aaacttggga cactacagat ttctatttga CD 1451 aaagggagaa atatttcatt tctaagacag attttctttc tcgttctata CD 1501 gagaagaaat gtttcaaatc taataaatac tttttagatt tgtttttaaa CD 1551 tagaggagat actaataaga ggagtacgac agaatcaaat attcattctt CD 1601 acgatctttc ttctcttact aaagcaaaac gaaaagaagt gaaatctggt CD 1651 tcctcttacg aatttctcga aaaagattct ttcttttttc tgatgaaaga CD 1701 gaattttgtc aaagatttta agtctatcac aaaagatttt ttctccaata CD 1751 gagaaaaaaa aatgactgat tattttccaa aattgattaa ttatgctttt CD 1801 ttggacatat cgtcaataga tgaatctaat atgagttttc atataactgg CD 1851 aagacattta aaagattttc cattaaatga gtggcgaact aatatcccgt CD 1901 caagaaatta catgctatca gatattagta gaatgattaa tctatcgaag CD 1951 ataagaaaaa aatttcaaaa cgtttttttt gtttcttcaa tatcaagtaa CD 2001 gaggattcgg caaaataaaa attcaaacga tttttattta atttcactta CD 2051 taaaactgaa tttgtcttgg aatcgccctt atttatgttg gtcaaccctt CD 2101 tacaaatgca acaaacaata catattcaat aggtatctca aattgaagga CD 2151 aagattcatg agaggagtag aacaattaaa tttattaatc actaaaccta CD 2201 atcagaatta tgataaaata ctttattttT aggtggaaag tgaaataggt CD 2251 aaatttcata aatcaaaaga aaatgaatta aattataatt ttttttttcc CD 2301 tttgttgaat ggtattaatg aagatgataa atttcttaat gaaatgtttc CD 2351 acaaaaaagt agaagctcat tctgaagaaa attttgaaac ctatatctac CD 2401 ccaacgaatc ataggaagaa attaaaattg tggtacgagt taaataaagg CD 2451 aagttacata tgcctcgata atgtagtaaa aaaatattac tctatatata CD 2501 aattaaagtt ttatttaata aatagaatga agaaactttg ggtagaaagg CD 2551 atagagaatg gaaattcaag taactttata Tgaaatatag tcaacggaca CD 2601 ttcatccaat tggaaaataa atgggagaga atggtctgat tataatatca CD 2651 aacgtgacaa atatattaat tggaattcgt acatatataa atggtttgat CD 2701 aggactaaaa atttgcaaat ttttcctaat tggttttctg ataatacttc CD 2751 aaggagatgg ttcaatgaaa taagatttat caaacctgat atttttatga CD 2801 cgtaccctaa aaaacttgag aagaattatt attcgaaagt ctatttcatt CD 2851 tttaatactt catcaaattc cctattagaa tctatttcta aaaaaaagaa CD 2901 tataaatttg agaggaagag ttttacataa ttataaaaaa ttatcacgag CD 2951 attcagaaaa attgattaag aataaattgc taccagaatc atttcttaat CD 3001 aaaaatttaa taaagaatat tattatttct ctttttaata atgaaaaaaa CD 3051 tcatgatatt tttagagaat ttcctagaaa aactttttct ctttggatat CD 3101 ataagaatcg aaataatggc ttcaattcaa tcaataattt tcaaaaaaat CD 3151 ttgatgatga attttcataa cactaatacc atagaatttc tagattattt CD 3201 acatgacttt cattttagat acgacaaaag attacccttt tttatgaaag CD 3251 aaattcatat taaaaattac gattctacat ataataaatt tttaagaatt CD 3301 ttgcctatat atagtaatct tcgttctctg tctatcaata aaataaaacc CD 3351 attttttttt caatcgagaa tagatattac tctatctatt Taattacaag CD 3401 tgtttaacga ttcattatct aattatttag gaagaacttg taactatatt CD 3451 tttacttctt tcactaatca cctatataaa ttgttgaatc tattaatcaa CD 3501 gattaattca tctatttaca aagaaacaga tagttgttcc atccaaaaat CD 3551 ttttagctat gactccttcg gggccaacga tactgaattt aaaaataact CD 3601 cattatgatg aattcttttt gggagaatta acaagtaact tcaatggata CD 3651 ctttgaattt tcttccgaac caaatctaag tcataccgaa attcaatctt CD 3701 ataaaaatga attattgtct gaatttctta ttgaatttcg gaataagaat CD 3751 aataggaaac ttTaatggat caaggaatca tttctgaagt taaatttaaa CD 3801 agaaaatttt aaatatgtta ttggaggaga atctatagat agaataagca CD 3851 taaatctaga tttctatgaa aagaataaga atatattacc ctatccttca CD 3901 ttaagcataa ctgatttttt tgataaagat gataaaatta aagtgtctaa CD 3951 aaaactttat ttcttggaga aatggaattt ctttcaaaat tacacttcat CD 4001 ggtttttcac gtttgaatgg tggaggtatt tcagtaatat acccctagaa CD 4051 acgttcccag aagtattact aaatattact gatcaatcta aatatatttc CD 4101 atataagact acgcaatata tagaagaaat tttgaaagat ttatggaaaa CD 4151 atctaaattt tattttccaa actaatattc taaggaaaat taatataaat CD 4201 tcagaaatac gtttattgaa acaaattaat aatgagcaac atgaatcaat CD 4251 atttatatat atatggtcac atttccaatt tattaatctt tcgaatgcta CD 4301 tatatttaac tttaataagc ttatctgttt cttgcttttt agtctctgaa CD 4351 aattacttct ctactttgat aggtttagat tatatcgatt catggagacg CD 4401 cttcaaagta attgaatact taagagatcc attgagagga tcttacttag CD 4451 tagaaagatg gatatatgga aatcaaactc aaatcattag aacggaaaat CD 4501 tttttcatgc ttcttctgaa aaattttatc cattatataa aaaatggaag CD 4551 atttttctta tttaccagaa aaaaattgga tacatggtta tttcatagta CD 4601 gaactttaga cctttctaga agaaaaaaag atttactagt taaatctgta CD 4651 atcacggaaa gaagtctttc gcaatataga ttgaatttaa atttaaatca CD 4701 taatttaaga aattacgatt tcggttataa aatctctgaa aaaccgggat CD 4751 tttattattt gagatattta gcagaaactt atcagaaaga tttagtcaat CD 4801 cattcttttt attcttctca cttagctgaa aaatggattt tactagcttt CD 4851 ttggaaagga atgatctctt cacagaaatt gtggcaaacg aaaatactga CD 4901 atcacgaatc ttacagaata ccaattccat tcgaattgga tttattttct CD 4951 tctaaaggaa ttttacttgt aggtcctacg gaaataggaa aatcttactt CD 5001 aataaaaaat ttagcggcag attcttatgt tcctttaata aaaatatcta CD 5051 tcagcaaacC tttgtataac aaaccagatg ttataactga aagttggata CD 5101 aatattttga tggaaagtct tcaaagatta actcttattt tggaattagc CD 5151 aaaaaaaatg tccccctgta taatatggat tcaagatatc catgagttaa CD 5201 atgtgaatcg ttcaaccgaa aatgtagaat ctgatccgac ttCtttactt CD 5251 ggtatcttat tgaaatattt ccatactgaa tttattagca aaagtaccaa CD 5301 aggtataata attatcggtt ctactcatct tcctagaaaa gttgatccag CD 5351 ctttaatttc tccaaataga ttggataaat tgatgaatat acgaataatt CD 5401 gatatatttg aaTgacaaga aaaattttct attcttctac atagtaaacg CD 5451 tttttatttt aaaaataagt tgcttcattt taacgagttt gcatatagaa CD 5501 ctatgggtta taatggaaga gatttagtag cacttgctaa cgaagtttca CD 5551 ttaattaata ctactcaggg taattcaact atttacattg atgcagtaag CD 5601 attagcgctc catagacaaa ctttaggttt tacatatatc aataatcaaa CD 5651 tgttattttg tcagaatgaa ggagtacttc ttcataaaat aggaaaagct CD 5701 gttatacaaa atatatttat aaaaattttt cctatgaatc ctttatatat CD 5751 aggtagtgac ttatggaaga agaagtttta ttatttgtcc gaatggtttt CD 5801 tggaaccttc tgtgaccgaa cccaccataa aggaattaac tttattatct CD 5851 tatattctcg gttgcttagc tggattagca gctggagatt cctggtctat CD 5901 tttagaacat gaaccagaaa atttaattcc tctcaataaa tttattgaga CD 5951 atgatttcga tttagcttgt ggtatttcag aaagtttcct agtagagttt CD 6001 tcttggttag aaatatttca agatgaatct attaataatg aaatcgaatt CD 6051 ttttcctaaa attggggcaa gacatttctt gaatatgatg caaagaggaa CD 6101 tttcttccac gacaagtgga aaattcatgt ataaacaaga tggactacga CD 6151 aatagatcta tatttaagaa aacggttcag tataaggaaa agctatatga CD 6201 attagcaagt gaaacaactt gggctcctaa aatatggcgt cttagtttca CD 6251 tcagaactaa atcattcgat tggataggaa gacccaatga ttttgaatct CD 6301 ttgtatagct tctggtttct cagagaaaaa gaacaaactt tttccgtttc CD 6351 tgaaaattca cgagaaattt ttcattccag tcaggttgcg cagtacaaaa CD 6401 caaaagaaga actcccttat gaaagaattc tatctagaat aagacggagg CD 6451 aatgtggagg aattagagtc tTaattaggt tttattttat cggaagatca CD 6501 atttaaaata ttaggatttc ccgaattatc tacgcaatat agaatagaat CD 6551 atgaattatt tcaaaaacca atgttgttta tgggaggacg attcatttgg CD 6601 gatcccacca gtctatcatt tgaaactcgt tactctgttt tttcacgccg CD 6651 agaattattc atagatgaag aaatgcgaag aagactttat gttacttatg CD 6701 gggcaagacg cgagcgagaa agatctcgtt caagtcaaaa gatcaaacag CD 6751 ttttttcttc gttgcggata tggtcgagat ttcatgaata attcatctat CD 6801 tggttggtgg aatggactat ttcttacaga gaaatataat attgagatct CD 6851 ttaaacgcat cgaagaaatt agtgttcaat tgaagcatcc cgaagtattt CD 6901 actcctgtat atttgtatTa aagttggttg attgaaaatt cgagagagaa CD 6951 actttcccgt tttgacttat tgaatcatcg cgaaagatgg atcaaattga CD 7001 ataataaatc attccattat ttttccattc atagtacttt attagaaagt CD 7051 tataactatt tattgaattt ctttatatcg aacagaatat tattagatga CD 7101 aatgacaaaa atgttattaa aagatggatg gctctttcaa aatgaaattg CD 7151 aacattttat ttgtaaaatg aagaaataa FT EDITED CDNA CD 1 atgaaacaga aattattaga aaacaaattt tcatacagga aattcaaatt CD 51 agaagaaata aagaaatatg aatatttatt aaattcatgt attaactgga CD 101 atttaatcaa attagtaact ggaattcctt ccaatcggga acatctcatt CD 151 aagctctttg acttacgaat tcttagttca ttaattttac gcgatttacg CD 201 taagtcagaa atgaaaaaaa gtttaatact taagagtttt ccactactta CD 251 tactatctat gtttatacat cgtatgaata gtaggaatat tgttgaaata CD 301 aataattgtc atttagagag aataatttat ggaggtataa actacagaga CD 351 aggaagagat gagatatcga ggagatattt gcattctttc atgaaaaatt CD 401 tctctattcc tttgaattac cctttttcta caaagaaagg acgagaaaga CD 451 tatacaaata acttactaag acaaaaaaaa catatttggg tttttaaacg CD 501 gaatctatta gggaaaaaat atataaaacc tgtatatgac aagattgatt CD 551 tctataattt tgaagaatgg aaaactctaa ttataaaaga aattcttcct CD 601 agttggaaaa tttctaatca gtccatagat aaggctaata ttttattgga CD 651 agataagaat atagaagatt taaagcattt ctttgaatta tatgttgatg CD 701 atataattcg tagagactat cattggaaaa actctctaga cattatctct CD 751 tatcgtgata gaaagaacca ggttaatttc aatttgaaga ataatttgga CD 801 attcttagat aaaaaattat tttattgtct tatatctgct ttttgtgaaa CD 851 aagttttatc tgaagtagaa ggtccattta aacataaaag aatcaaatca CD 901 actttcaatt tgaaaaatat tgaagatttt tcggatttcg aagtaactaa CD 951 taaagaaata ttcaaatggg aactacactg gtggaagaaa aaaatctttc CD 1001 aatttttaga taaaaatcat gaatctgatC agagtatagc caaatctttt CD 1051 acttttttcc aaaataagag gtttctcttt ctcgaaaatt atgctgaatt CD 1101 ttatacatgg ctactctacg aggattcccc ctttcatttg aaaaagaata CD 1151 agcaactttt ggatactgcc aaagatacgt ttaaagaaga ttcttttcaa CD 1201 ttaaatgata gaagaaatca aatttattct tttgaaaata aaggtatatt CD 1251 tctgaatatt ctacataatt tttcgattta tgtttcaaat aaagtaagaa CD 1301 aattgaatca tttaaaaata ttttctgata tatctataaa aaattcatat CD 1351 ttgattaata aaaatttagt atatcatgga aaaggaagtg gtggaacaat CD 1401 ctatgaagat gagaaacaaa aaacttggga cactacagat ttctatttga CD 1451 aaagggagaa atatttcatt tctaagacag attttctttc tcgttctata CD 1501 gagaagaaat gtttcaaatc taataaatac tttttagatt tgtttttaaa CD 1551 tagaggagat actaataaga ggagtacgac agaatcaaat attcattctt CD 1601 acgatctttc ttctcttact aaagcaaaac gaaaagaagt gaaatctggt CD 1651 tcctcttacg aatttctcga aaaagattct ttcttttttc tgatgaaaga CD 1701 gaattttgtc aaagatttta agtctatcac aaaagatttt ttctccaata CD 1751 gagaaaaaaa aatgactgat tattttccaa aattgattaa ttatgctttt CD 1801 ttggacatat cgtcaataga tgaatctaat atgagttttc atataactgg CD 1851 aagacattta aaagattttc cattaaatga gtggcgaact aatatcccgt CD 1901 caagaaatta catgctatca gatattagta gaatgattaa tctatcgaag CD 1951 ataagaaaaa aatttcaaaa cgtttttttt gtttcttcaa tatcaagtaa CD 2001 gaggattcgg caaaataaaa attcaaacga tttttattta atttcactta CD 2051 taaaactgaa tttgtcttgg aatcgccctt atttatgttg gtcaaccctt CD 2101 tacaaatgca acaaacaata catattcaat aggtatctca aattgaagga CD 2151 aagattcatg agaggagtag aacaattaaa tttattaatc actaaaccta CD 2201 atcagaatta tgataaaata ctttattttC aggtggaaag tgaaataggt CD 2251 aaatttcata aatcaaaaga aaatgaatta aattataatt ttttttttcc CD 2301 tttgttgaat ggtattaatg aagatgataa atttcttaat gaaatgtttc CD 2351 acaaaaaagt agaagctcat tctgaagaaa attttgaaac ctatatctac CD 2401 ccaacgaatc ataggaagaa attaaaattg tggtacgagt taaataaagg CD 2451 aagttacata tgcctcgata atgtagtaaa aaaatattac tctatatata CD 2501 aattaaagtt ttatttaata aatagaatga agaaactttg ggtagaaagg CD 2551 atagagaatg gaaattcaag taactttata Cgaaatatag tcaacggaca CD 2601 ttcatccaat tggaaaataa atgggagaga atggtctgat tataatatca CD 2651 aacgtgacaa atatattaat tggaattcgt acatatataa atggtttgat CD 2701 aggactaaaa atttgcaaat ttttcctaat tggttttctg ataatacttc CD 2751 aaggagatgg ttcaatgaaa taagatttat caaacctgat atttttatga CD 2801 cgtaccctaa aaaacttgag aagaattatt attcgaaagt ctatttcatt CD 2851 tttaatactt catcaaattc cctattagaa tctatttcta aaaaaaagaa CD 2901 tataaatttg agaggaagag ttttacataa ttataaaaaa ttatcacgag CD 2951 attcagaaaa attgattaag aataaattgc taccagaatc atttcttaat CD 3001 aaaaatttaa taaagaatat tattatttct ctttttaata atgaaaaaaa CD 3051 tcatgatatt tttagagaat ttcctagaaa aactttttct ctttggatat CD 3101 ataagaatcg aaataatggc ttcaattcaa tcaataattt tcaaaaaaat CD 3151 ttgatgatga attttcataa cactaatacc atagaatttc tagattattt CD 3201 acatgacttt cattttagat acgacaaaag attacccttt tttatgaaag CD 3251 aaattcatat taaaaattac gattctacat ataataaatt tttaagaatt CD 3301 ttgcctatat atagtaatct tcgttctctg tctatcaata aaataaaacc CD 3351 attttttttt caatcgagaa tagatattac tctatctatt Caattacaag CD 3401 tgtttaacga ttcattatct aattatttag gaagaacttg taactatatt CD 3451 tttacttctt tcactaatca cctatataaa ttgttgaatc tattaatcaa CD 3501 gattaattca tctatttaca aagaaacaga tagttgttcc atccaaaaat CD 3551 ttttagctat gactccttcg gggccaacga tactgaattt aaaaataact CD 3601 cattatgatg aattcttttt gggagaatta acaagtaact tcaatggata CD 3651 ctttgaattt tcttccgaac caaatctaag tcataccgaa attcaatctt CD 3701 ataaaaatga attattgtct gaatttctta ttgaatttcg gaataagaat CD 3751 aataggaaac ttCaatggat caaggaatca tttctgaagt taaatttaaa CD 3801 agaaaatttt aaatatgtta ttggaggaga atctatagat agaataagca CD 3851 taaatctaga tttctatgaa aagaataaga atatattacc ctatccttca CD 3901 ttaagcataa ctgatttttt tgataaagat gataaaatta aagtgtctaa CD 3951 aaaactttat ttcttggaga aatggaattt ctttcaaaat tacacttcat CD 4001 ggtttttcac gtttgaatgg tggaggtatt tcagtaatat acccctagaa CD 4051 acgttcccag aagtattact aaatattact gatcaatcta aatatatttc CD 4101 atataagact acgcaatata tagaagaaat tttgaaagat ttatggaaaa CD 4151 atctaaattt tattttccaa actaatattc taaggaaaat taatataaat CD 4201 tcagaaatac gtttattgaa acaaattaat aatgagcaac atgaatcaat CD 4251 atttatatat atatggtcac atttccaatt tattaatctt tcgaatgcta CD 4301 tatatttaac tttaataagc ttatctgttt cttgcttttt agtctctgaa CD 4351 aattacttct ctactttgat aggtttagat tatatcgatt catggagacg CD 4401 cttcaaagta attgaatact taagagatcc attgagagga tcttacttag CD 4451 tagaaagatg gatatatgga aatcaaactc aaatcattag aacggaaaat CD 4501 tttttcatgc ttcttctgaa aaattttatc cattatataa aaaatggaag CD 4551 atttttctta tttaccagaa aaaaattgga tacatggtta tttcatagta CD 4601 gaactttaga cctttctaga agaaaaaaag atttactagt taaatctgta CD 4651 atcacggaaa gaagtctttc gcaatataga ttgaatttaa atttaaatca CD 4701 taatttaaga aattacgatt tcggttataa aatctctgaa aaaccgggat CD 4751 tttattattt gagatattta gcagaaactt atcagaaaga tttagtcaat CD 4801 cattcttttt attcttctca cttagctgaa aaatggattt tactagcttt CD 4851 ttggaaagga atgatctctt cacagaaatt gtggcaaacg aaaatactga CD 4901 atcacgaatc ttacagaata ccaattccat tcgaattgga tttattttct CD 4951 tctaaaggaa ttttacttgt aggtcctacg gaaataggaa aatcttactt CD 5001 aataaaaaat ttagcggcag attcttatgt tcctttaata aaaatatcta CD 5051 tcagcaaacT tttgtataac aaaccagatg ttataactga aagttggata CD 5101 aatattttga tggaaagtct tcaaagatta actcttattt tggaattagc CD 5151 aaaaaaaatg tccccctgta taatatggat tcaagatatc catgagttaa CD 5201 atgtgaatcg ttcaaccgaa aatgtagaat ctgatccgac ttTtttactt CD 5251 ggtatcttat tgaaatattt ccatactgaa tttattagca aaagtaccaa CD 5301 aggtataata attatcggtt ctactcatct tcctagaaaa gttgatccag CD 5351 ctttaatttc tccaaataga ttggataaat tgatgaatat acgaataatt CD 5401 gatatatttg aaCgacaaga aaaattttct attcttctac atagtaaacg CD 5451 tttttatttt aaaaataagt tgcttcattt taacgagttt gcatatagaa CD 5501 ctatgggtta taatggaaga gatttagtag cacttgctaa cgaagtttca CD 5551 ttaattaata ctactcaggg taattcaact atttacattg atgcagtaag CD 5601 attagcgctc catagacaaa ctttaggttt tacatatatc aataatcaaa CD 5651 tgttattttg tcagaatgaa ggagtacttc ttcataaaat aggaaaagct CD 5701 gttatacaaa atatatttat aaaaattttt cctatgaatc ctttatatat CD 5751 aggtagtgac ttatggaaga agaagtttta ttatttgtcc gaatggtttt CD 5801 tggaaccttc tgtgaccgaa cccaccataa aggaattaac tttattatct CD 5851 tatattctcg gttgcttagc tggattagca gctggagatt cctggtctat CD 5901 tttagaacat gaaccagaaa atttaattcc tctcaataaa tttattgaga CD 5951 atgatttcga tttagcttgt ggtatttcag aaagtttcct agtagagttt CD 6001 tcttggttag aaatatttca agatgaatct attaataatg aaatcgaatt CD 6051 ttttcctaaa attggggcaa gacatttctt gaatatgatg caaagaggaa CD 6101 tttcttccac gacaagtgga aaattcatgt ataaacaaga tggactacga CD 6151 aatagatcta tatttaagaa aacggttcag tataaggaaa agctatatga CD 6201 attagcaagt gaaacaactt gggctcctaa aatatggcgt cttagtttca CD 6251 tcagaactaa atcattcgat tggataggaa gacccaatga ttttgaatct CD 6301 ttgtatagct tctggtttct cagagaaaaa gaacaaactt tttccgtttc CD 6351 tgaaaattca cgagaaattt ttcattccag tcaggttgcg cagtacaaaa CD 6401 caaaagaaga actcccttat gaaagaattc tatctagaat aagacggagg CD 6451 aatgtggagg aattagagtc tCaattaggt tttattttat cggaagatca CD 6501 atttaaaata ttaggatttc ccgaattatc tacgcaatat agaatagaat CD 6551 atgaattatt tcaaaaacca atgttgttta tgggaggacg attcatttgg CD 6601 gatcccacca gtctatcatt tgaaactcgt tactctgttt tttcacgccg CD 6651 agaattattc atagatgaag aaatgcgaag aagactttat gttacttatg CD 6701 gggcaagacg cgagcgagaa agatctcgtt caagtcaaaa gatcaaacag CD 6751 ttttttcttc gttgcggata tggtcgagat ttcatgaata attcatctat CD 6801 tggttggtgg aatggactat ttcttacaga gaaatataat attgagatct CD 6851 ttaaacgcat cgaagaaatt agtgttcaat tgaagcatcc cgaagtattt CD 6901 actcctgtat atttgtatCa aagttggttg attgaaaatt cgagagagaa CD 6951 actttcccgt tttgacttat tgaatcatcg cgaaagatgg atcaaattga CD 7001 ataataaatc attccattat ttttccattc atagtacttt attagaaagt CD 7051 tataactatt tattgaattt ctttatatcg aacagaatat tattagatga CD 7101 aatgacaaaa atgttattaa aagatggatg gctctttcaa aatgaaattg CD 7151 aacattttat ttgtaaaatg aagaaataa SQ SEQUENCE 2393 AA; MKQKLLENKF SYRKFKLEEI KKYEYLLNSC INWNLIKLVT GIPSNREHLI KLFDLRILSS LILRDLRKSE MKKSLILKSF PLLILSMFIH RMNSRNIVEI NNCHLERIIY GGINYREGRD EISRRYLHSF MKNFSIPLNY PFSTKKGRER YTNNLLRQKK HIWVFKRNLL GKKYIKPVYD KIDFYNFEEW KTLIIKEILP SWKISNQSID KANILLEDKN IEDLKHFFEL YVDDIIRRDY HWKNSLDIIS YRDRKNQVNF NLKNNLEFLD KKLFYCLISA FCEKVLSEVE GPFKHKRIKS TFNLKNIEDF SDFEVTNKEI FKWELHWWKK KIFQFLDKNH ESDQSIAKSF TFFQNKRFLF LENYAEFYTW LLYEDSPFHL KKNKQLLDTA KDTFKEDSFQ LNDRRNQIYS FENKGIFLNI LHNFSIYVSN KVRKLNHLKI FSDISIKNSY LINKNLVYHG KGSGGTIYED EKQKTWDTTD FYLKREKYFI SKTDFLSRSI EKKCFKSNKY FLDLFLNRGD TNKRSTTESN IHSYDLSSLT KAKRKEVKSG SSYEFLEKDS FFFLMKENFV KDFKSITKDF FSNREKKMTD YFPKLINYAF LDISSIDESN MSFHITGRHL KDFPLNEWRT NIPSRNYMLS DISRMINLSK IRKKFQNVFF VSSISSKRIR QNKNSNDFYL ISLIKLNLSW NRPYLCWSTL YKCNKQYIFN RYLKLKERFM RGVEQLNLLI TKPNQNYDKI LYFQVESEIG KFHKSKENEL NYNFFFPLLN GINEDDKFLN EMFHKKVEAH SEENFETYIY PTNHRKKLKL WYELNKGSYI CLDNVVKKYY SIYKLKFYLI NRMKKLWVER IENGNSSNFI RNIVNGHSSN WKINGREWSD YNIKRDKYIN WNSYIYKWFD RTKNLQIFPN WFSDNTSRRW FNEIRFIKPD IFMTYPKKLE KNYYSKVYFI FNTSSNSLLE SISKKKNINL RGRVLHNYKK LSRDSEKLIK NKLLPESFLN KNLIKNIIIS LFNNEKNHDI FREFPRKTFS LWIYKNRNNG FNSINNFQKN LMMNFHNTNT IEFLDYLHDF HFRYDKRLPF FMKEIHIKNY DSTYNKFLRI LPIYSNLRSL SINKIKPFFF QSRIDITLSI QLQVFNDSLS NYLGRTCNYI FTSFTNHLYK LLNLLIKINS SIYKETDSCS IQKFLAMTPS GPTILNLKIT HYDEFFLGEL TSNFNGYFEF SSEPNLSHTE IQSYKNELLS EFLIEFRNKN NRKLQWIKES FLKLNLKENF KYVIGGESID RISINLDFYE KNKNILPYPS LSITDFFDKD DKIKVSKKLY FLEKWNFFQN YTSWFFTFEW WRYFSNIPLE TFPEVLLNIT DQSKYISYKT TQYIEEILKD LWKNLNFIFQ TNILRKININ SEIRLLKQIN NEQHESIFIY IWSHFQFINL SNAIYLTLIS LSVSCFLVSE NYFSTLIGLD YIDSWRRFKV IEYLRDPLRG SYLVERWIYG NQTQIIRTEN FFMLLLKNFI HYIKNGRFFL FTRKKLDTWL FHSRTLDLSR RKKDLLVKSV ITERSLSQYR LNLNLNHNLR NYDFGYKISE KPGFYYLRYL AETYQKDLVN HSFYSSHLAE KWILLAFWKG MISSQKLWQT KILNHESYRI PIPFELDLFS SKGILLVGPT EIGKSYLIKN LAADSYVPLI KISISKLLYN KPDVITESWI NILMESLQRL TLILELAKKM SPCIIWIQDI HELNVNRSTE NVESDPTFLL GILLKYFHTE FISKSTKGII IIGSTHLPRK VDPALISPNR LDKLMNIRII DIFERQEKFS ILLHSKRFYF KNKLLHFNEF AYRTMGYNGR DLVALANEVS LINTTQGNST IYIDAVRLAL HRQTLGFTYI NNQMLFCQNE GVLLHKIGKA VIQNIFIKIF PMNPLYIGSD LWKKKFYYLS EWFLEPSVTE PTIKELTLLS YILGCLAGLA AGDSWSILEH EPENLIPLNK FIENDFDLAC GISESFLVEF SWLEIFQDES INNEIEFFPK IGARHFLNMM QRGISSTTSG KFMYKQDGLR NRSIFKKTVQ YKEKLYELAS ETTWAPKIWR LSFIRTKSFD WIGRPNDFES LYSFWFLREK EQTFSVSENS REIFHSSQVA QYKTKEELPY ERILSRIRRR NVEELESQLG FILSEDQFKI LGFPELSTQY RIEYELFQKP MLFMGGRFIW DPTSLSFETR YSVFSRRELF IDEEMRRRLY VTYGARRERE RSRSSQKIKQ FFLRCGYGRD FMNNSSIGWW NGLFLTEKYN IEIFKRIEEI SVQLKHPEVF TPVYLYQSWL IENSREKLSR FDLLNHRERW IKLNNKSFHY FSIHSTLLES YNYLLNFFIS NRILLDEMTK MLLKDGWLFQ NEIEHFICKM KK* // ID AB086179_22 STANDARD; PRT; 382 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : cysA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55343.1 FT PROTEIN_NAME : sulfate transport ATP-binding protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 43571 - 44716 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 4 P(cCt) -> L(cTt) FT EDITING : 18 P(cCg) -> L(cTg) FT EDITING : 33 F(Ttt) -> L(Ctt) FT EDITING : 34 S(tCa) -> L(tTa) FT EDITING : 72 *(Taa) -> Q(Caa) FT EDITING : 80 S(tCt) -> F(tTt) FT EDITING : 86 S(tCc) -> F(tTc) FT EDITING : 95 T(aCt) -> I(aTt) FT EDITING : 121 *(Tga) -> R(Cga) FT EDITING : 123 P(Cca) -> S(Tca) FT EDITING : 154 P(cCt) -> L(cTt) FT EDITING : 155 S(tCa) -> L(tTa) FT EDITING : 156 P(CCg) -> L(TTg) FT EDITING : 163 S(tCa) -> L(tTa) FT EDITING : 168 *(Tga) -> R(Cga) FT EDITING : 193 *(Taa) -> Q(Caa) FT EDITING : 196 V(gTt) -> A(gCt) FT EDITING : 233 P(Cca) -> S(Tca) FT EDITING : 295 L(cTt) -> P(cCt) FT EDITING : 346 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 1146 NT; CD 1 aCgagtattc Ctgtgtatga agtttccaaa tcactaggta atttaaaagt CD 51 tcCggatcga gtaagtttat atgttcgtaa agtttctttg gtagctTttt CD 101 Caggtccctc aggttcagga aaatcaagtt tgttacgaat aatagcgggt CD 151 cttgacagtc ctgattacgg aagtgtatgg ttgcatggta cagatatgac CD 201 taatacttct actTaatatc gacacatggc ttttgtttCt caacattatg CD 251 ctctttCcaa aaatatgact gtttatgaaa ataCttcttt tggacttcgt CD 301 ttaagaggat tttcctacca gaaaattaga aataaagtaa atgatttgtt CD 351 agattgtctt TgaattCcag acattgtgtc tgagtatccg ggaaaattat CD 401 cagggggaca gaaacaacgt gttgctcttg ctagaagtct ggctattaaa CD 451 tcagattttc CttCaCCgga cgagcctttt ggagcctCag atggagaatt CD 501 gTgaagacac cttagtaaat ggttaaagcg ttacttgaaa gacaatggaa CD 551 ttacaacaat tatggttact catgatTaaa aagaagTtat ttctatggct CD 601 gacgaaattg tggttttgaa gcaaggtcgt ttcttgcaac aaggaagatc CD 651 caaaaatctt tatgatgaac caattgatta ttttgttggt atttttCcag CD 701 gatcattcat tgaatttcct caattagaag aatctttgga tgctccactt CD 751 ggtagtagta gtagtagtag tagtagtact aaaaaatcca tggaaaaaga CD 801 tttcacgcca tttattcctg atctaatatg gtctcaaata tttactaatc CD 851 aatcgataca tcactatcat ttttttctaa gacTtcatga actgtatcta CD 901 gaatctcaaa tagatttgaa agcaatacct gttcaaataa aaaaaattat CD 951 ttataaaagg actttcgttc aattagattt atctataact ccttcttcat CD 1001 ggaacattac tattcccata ggttatcaag cctttTgaaa attaaatatt CD 1051 caatctttcg tgcagaagct ctatataaag cctagaaatc aagtttattt CD 1101 acgggcttat cccaagaaaa aaaacatcat tagtaaacaa atctaa FT EDITED CDNA CD 1 aTgagtattc Ttgtgtatga agtttccaaa tcactaggta atttaaaagt CD 51 tcTggatcga gtaagtttat atgttcgtaa agtttctttg gtagctCttt CD 101 Taggtccctc aggttcagga aaatcaagtt tgttacgaat aatagcgggt CD 151 cttgacagtc ctgattacgg aagtgtatgg ttgcatggta cagatatgac CD 201 taatacttct actCaatatc gacacatggc ttttgtttTt caacattatg CD 251 ctctttTcaa aaatatgact gtttatgaaa ataTttcttt tggacttcgt CD 301 ttaagaggat tttcctacca gaaaattaga aataaagtaa atgatttgtt CD 351 agattgtctt CgaattTcag acattgtgtc tgagtatccg ggaaaattat CD 401 cagggggaca gaaacaacgt gttgctcttg ctagaagtct ggctattaaa CD 451 tcagattttc TttTaTTgga cgagcctttt ggagcctTag atggagaatt CD 501 gCgaagacac cttagtaaat ggttaaagcg ttacttgaaa gacaatggaa CD 551 ttacaacaat tatggttact catgatCaaa aagaagCtat ttctatggct CD 601 gacgaaattg tggttttgaa gcaaggtcgt ttcttgcaac aaggaagatc CD 651 caaaaatctt tatgatgaac caattgatta ttttgttggt atttttTcag CD 701 gatcattcat tgaatttcct caattagaag aatctttgga tgctccactt CD 751 ggtagtagta gtagtagtag tagtagtact aaaaaatcca tggaaaaaga CD 801 tttcacgcca tttattcctg atctaatatg gtctcaaata tttactaatc CD 851 aatcgataca tcactatcat ttttttctaa gacCtcatga actgtatcta CD 901 gaatctcaaa tagatttgaa agcaatacct gttcaaataa aaaaaattat CD 951 ttataaaagg actttcgttc aattagattt atctataact ccttcttcat CD 1001 ggaacattac tattcccata ggttatcaag cctttCgaaa attaaatatt CD 1051 caatctttcg tgcagaagct ctatataaag cctagaaatc aagtttattt CD 1101 acgggcttat cccaagaaaa aaaacatcat tagtaaacaa atctaa SQ SEQUENCE 382 AA; MSILVYEVSK SLGNLKVLDR VSLYVRKVSL VALLGPSGSG KSSLLRIIAG LDSPDYGSVW LHGTDMTNTS TQYRHMAFVF QHYALFKNMT VYENISFGLR LRGFSYQKIR NKVNDLLDCL RISDIVSEYP GKLSGGQKQR VALARSLAIK SDFLLLDEPF GALDGELRRH LSKWLKRYLK DNGITTIMVT HDQKEAISMA DEIVVLKQGR FLQQGRSKNL YDEPIDYFVG IFSGSFIEFP QLEESLDAPL GSSSSSSSST KKSMEKDFTP FIPDLIWSQI FTNQSIHHYH FFLRPHELYL ESQIDLKAIP VQIKKIIYKR TFVQLDLSIT PSSWNITIPI GYQAFRKLNI QSFVQKLYIK PRNQVYLRAY PKKKNIISKQ I* // ID AB086179_23 STANDARD; PRT; 354 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55344.1 FT PROTEIN_NAME : photosystem II D2 protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 50032 - 51093 FT DIRECTIONS : positive FT EDITING : 27 C(Tgc) -> R(Cgc) FT EDITING : 59 R(Cgg) -> W(Tgg) FT EDITING : 129 C(Tgc) -> R(Cgc) FT EDITING : 138 *(Taa) -> Q(Caa) FT EDITING : 147 S(tCt) -> F(tTt) FT EDITING : 180 S(tCt) -> F(tTt) FT EDITING : 187 *(Taa) -> Q(Caa) FT EDITING : 215 Y(Tat) -> H(Cat) FT EDITING : 263 P(Cct) -> S(Tct) FT EDITING : 312 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 1062 NT; CD 1 atgactatag ccattggaaa gtcttctgaa gaaccaaaag gtttatttga CD 51 tagtatggat gactggttaa gaagagatTg cttcgtattt gtaggttggt CD 101 ccggcttatt gctgtttcct tgtgcttatt ttgctttagg tggatggttt CD 151 acaggtacga ctttcgtaac ttcaCggtat actcatggat tagctagttc CD 201 ttacttagag ggctgtaatt tcttgaccgc cgcggtttct acccctgcta CD 251 atagtttagc acattctcta ttgcttctat ggggtcctga agcacaagga CD 301 gatttcactc gttggtgcca actaggcggt ctatggacct ttgtggctct CD 351 ccatggtgct tttggtttaa taggcttcat gttaTgccaa ttcgaactag CD 401 ctagatctgt gTaattacgt ccttataatg ccattgcatC ttctggtcca CD 451 attgcagttt ttgtttccgt attcttgatc tatcctttgg gtcagtctgg CD 501 ttggtttttt gcacccagtt tcggtgtagc agctatctCt cgattcattc CD 551 ttttcttcTa aggtttccat aactggactt taaacccgtt tcatatgatg CD 601 ggagttgctg gagttttagg tgctgcttta ttatgtgcta ttTatggggc CD 651 tacagtggag aatactttgt ttgaggatgg tgatggtgca aatacattcc CD 701 gtgctttcaa cccaactcaa tctgaagaaa cttattctat ggtaactgct CD 751 aatagatttt ggtctcagat cttcggtgtt gctttcCcta acaagcgttg CD 801 gttacacttt ttcatgttat tcgtaccagt aactggttta tggatgagtg CD 851 ctattggagt cgttggttta gccttaaact tacgagcata tgattttgta CD 901 tctcaagaga ttcgtgcagc ggaggatcct gaatCtgaaa ctttctacac CD 951 taaaaatatt cttctgaatg aaggtattcg tgcttggatg gcggctcaag CD 1001 atcagcctca tgaaaacctt gtattccctg aggaggtatt accctgtgga CD 1051 aacgctcttt aa FT EDITED CDNA CD 1 atgactatag ccattggaaa gtcttctgaa gaaccaaaag gtttatttga CD 51 tagtatggat gactggttaa gaagagatCg cttcgtattt gtaggttggt CD 101 ccggcttatt gctgtttcct tgtgcttatt ttgctttagg tggatggttt CD 151 acaggtacga ctttcgtaac ttcaTggtat actcatggat tagctagttc CD 201 ttacttagag ggctgtaatt tcttgaccgc cgcggtttct acccctgcta CD 251 atagtttagc acattctcta ttgcttctat ggggtcctga agcacaagga CD 301 gatttcactc gttggtgcca actaggcggt ctatggacct ttgtggctct CD 351 ccatggtgct tttggtttaa taggcttcat gttaCgccaa ttcgaactag CD 401 ctagatctgt gCaattacgt ccttataatg ccattgcatT ttctggtcca CD 451 attgcagttt ttgtttccgt attcttgatc tatcctttgg gtcagtctgg CD 501 ttggtttttt gcacccagtt tcggtgtagc agctatctTt cgattcattc CD 551 ttttcttcCa aggtttccat aactggactt taaacccgtt tcatatgatg CD 601 ggagttgctg gagttttagg tgctgcttta ttatgtgcta ttCatggggc CD 651 tacagtggag aatactttgt ttgaggatgg tgatggtgca aatacattcc CD 701 gtgctttcaa cccaactcaa tctgaagaaa cttattctat ggtaactgct CD 751 aatagatttt ggtctcagat cttcggtgtt gctttcTcta acaagcgttg CD 801 gttacacttt ttcatgttat tcgtaccagt aactggttta tggatgagtg CD 851 ctattggagt cgttggttta gccttaaact tacgagcata tgattttgta CD 901 tctcaagaga ttcgtgcagc ggaggatcct gaatTtgaaa ctttctacac CD 951 taaaaatatt cttctgaatg aaggtattcg tgcttggatg gcggctcaag CD 1001 atcagcctca tgaaaacctt gtattccctg aggaggtatt accctgtgga CD 1051 aacgctcttt aa SQ SEQUENCE 354 AA; MTIAIGKSSE EPKGLFDSMD DWLRRDRFVF VGWSGLLLFP CAYFALGGWF TGTTFVTSWY THGLASSYLE GCNFLTAAVS TPANSLAHSL LLLWGPEAQG DFTRWCQLGG LWTFVALHGA FGLIGFMLRQ FELARSVQLR PYNAIAFSGP IAVFVSVFLI YPLGQSGWFF APSFGVAAIF RFILFFQGFH NWTLNPFHMM GVAGVLGAAL LCAIHGATVE NTLFEDGDGA NTFRAFNPTQ SEETYSMVTA NRFWSQIFGV AFSNKRWLHF FMLFVPVTGL WMSAIGVVGL ALNLRAYDFV SQEIRAAEDP EFETFYTKNI LLNEGIRAWM AAQDQPHENL VFPEEVLPCG NAL* // ID AB086179_24 STANDARD; PRT; 474 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55345.1 FT PROTEIN_NAME : photosystem II 44 kDa protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 51041 - 52462 FT DIRECTIONS : positive FT EDITING : 12 P(ccT) -> P(ccC) FT EDITING : 56 Y(Tat) -> H(Cat) FT EDITING : 173 S(tCt) -> F(tTt) FT EDITING : 190 V(gTt) -> A(gCt) FT EDITING : 267 F(tTc) -> S(tCc) FT EDITING : 344 P(Cct) -> S(Tct) FT EDITING : 390 *(Tga) -> R(Cga) FT EDITING : 471 L(cTt) -> P(cCt) FT CODON_START : 1 CL CDNALEN 1422 NT; CD 1 atgaaaacct tgtattccct gaggaggtat tacccTgtgg aaacgctctt CD 51 taatggaact ttagctttgg gtggtcgtga tcaagaaacc actggtttcg CD 101 cttggtgggc tggtaatgct cgacttatca atttatctgg taaattatta CD 151 ggtgctcatg tagctTatgc tggcttgata gttttttggg ctggagcgat CD 201 gaatctattt gaagtggctc actttgtacc ggaaaaaccc atgtatgagc CD 251 agggattaat tttattgccg catctagcta ctttagggtg gggtgtaggt CD 301 cccggtggag aagttatcga tacttttcca tacttcgtat ctggtgtact CD 351 ccatttaatt tcgtccgcag ttttaggttt cggaggtatc tatcattctc CD 401 ttattggacc agaaacctta gaagaatctt ttccattctt tggttatgta CD 451 tggaaagata agaataaaat gactactatt ctaggtattc atcttgtttt CD 501 actaggtctt ggtgcttCtc tcctggtatt caaggcttca tttttcggag CD 551 gtgtatacga tacctgggTt cctggtggtg gagatgtaag agaaatcaca CD 601 aatcttacac ttagtccgag tattattttt gggtatttac tcaagtcacc CD 651 ttttggtgga gagggatgga ttgttagtgt ggataatttg gaagatataa CD 701 tcggcggaca tgtttggtta ggcttgattt gtatcctagg tggtatctgg CD 751 catatcttga ccaaaccctt tgcgtgggcc cgccgtgctt tagtatggtT CD 801 cggagaagcc tatctatctt atagtttagg cgctatttct gtttttggtt CD 851 tcattgcttg ttgctttgtt tggtttaata acacagctta tcctagtgaa CD 901 ttttatggtc ctactggtcc agaagcttct caagctcaag cttttacttt CD 951 tttggttaga gaccaacgcc tcggagctaa tgtaggttct gcccaaggac CD 1001 ctaccggttt aggtaaatat cttatgcgcC ctcctactgg agaaatcatt CD 1051 tttggaggag aaacaatgcg cttttgggat ctccgtgctc catggttgga CD 1101 acctctaaga ggtcccaatg gcttagattt gagtaagttg aagcaagata CD 1151 tacagccctg gcaggagTga cgttccgcag aatatatgac tcatgctcct CD 1201 ttgggttctt tgaattctgt aggtggagta gctactgaaa ttaatgcagt CD 1251 aaactatgtt tctccccgta gttggttagc cacctctcat tttgtattgg CD 1301 gattcttttt tttcgtaggt cacttgtggc acgccgggag agcacgtgca CD 1351 gctgcagctg gattcgaaaa agggattgat cgtgattccg aacctgttct CD 1401 ttctatgaca cTtcttaact ag FT EDITED CDNA CD 1 atgaaaacct tgtattccct gaggaggtat tacccCgtgg aaacgctctt CD 51 taatggaact ttagctttgg gtggtcgtga tcaagaaacc actggtttcg CD 101 cttggtgggc tggtaatgct cgacttatca atttatctgg taaattatta CD 151 ggtgctcatg tagctCatgc tggcttgata gttttttggg ctggagcgat CD 201 gaatctattt gaagtggctc actttgtacc ggaaaaaccc atgtatgagc CD 251 agggattaat tttattgccg catctagcta ctttagggtg gggtgtaggt CD 301 cccggtggag aagttatcga tacttttcca tacttcgtat ctggtgtact CD 351 ccatttaatt tcgtccgcag ttttaggttt cggaggtatc tatcattctc CD 401 ttattggacc agaaacctta gaagaatctt ttccattctt tggttatgta CD 451 tggaaagata agaataaaat gactactatt ctaggtattc atcttgtttt CD 501 actaggtctt ggtgcttTtc tcctggtatt caaggcttca tttttcggag CD 551 gtgtatacga tacctgggCt cctggtggtg gagatgtaag agaaatcaca CD 601 aatcttacac ttagtccgag tattattttt gggtatttac tcaagtcacc CD 651 ttttggtgga gagggatgga ttgttagtgt ggataatttg gaagatataa CD 701 tcggcggaca tgtttggtta ggcttgattt gtatcctagg tggtatctgg CD 751 catatcttga ccaaaccctt tgcgtgggcc cgccgtgctt tagtatggtC CD 801 cggagaagcc tatctatctt atagtttagg cgctatttct gtttttggtt CD 851 tcattgcttg ttgctttgtt tggtttaata acacagctta tcctagtgaa CD 901 ttttatggtc ctactggtcc agaagcttct caagctcaag cttttacttt CD 951 tttggttaga gaccaacgcc tcggagctaa tgtaggttct gcccaaggac CD 1001 ctaccggttt aggtaaatat cttatgcgcT ctcctactgg agaaatcatt CD 1051 tttggaggag aaacaatgcg cttttgggat ctccgtgctc catggttgga CD 1101 acctctaaga ggtcccaatg gcttagattt gagtaagttg aagcaagata CD 1151 tacagccctg gcaggagCga cgttccgcag aatatatgac tcatgctcct CD 1201 ttgggttctt tgaattctgt aggtggagta gctactgaaa ttaatgcagt CD 1251 aaactatgtt tctccccgta gttggttagc cacctctcat tttgtattgg CD 1301 gattcttttt tttcgtaggt cacttgtggc acgccgggag agcacgtgca CD 1351 gctgcagctg gattcgaaaa agggattgat cgtgattccg aacctgttct CD 1401 ttctatgaca cCtcttaact ag SQ SEQUENCE 474 AA; MKTLYSLRRY YPVETLFNGT LALGGRDQET TGFAWWAGNA RLINLSGKLL GAHVAHAGLI VFWAGAMNLF EVAHFVPEKP MYEQGLILLP HLATLGWGVG PGGEVIDTFP YFVSGVLHLI SSAVLGFGGI YHSLIGPETL EESFPFFGYV WKDKNKMTTI LGIHLVLLGL GAFLLVFKAS FFGGVYDTWA PGGGDVREIT NLTLSPSIIF GYLLKSPFGG EGWIVSVDNL EDIIGGHVWL GLICILGGIW HILTKPFAWA RRALVWSGEA YLSYSLGAIS VFGFIACCFV WFNNTAYPSE FYGPTGPEAS QAQAFTFLVR DQRLGANVGS AQGPTGLGKY LMRSPTGEII FGGETMRFWD LRAPWLEPLR GPNGLDLSKL KQDIQPWQER RSAEYMTHAP LGSLNSVGGV ATEINAVNYV SPRSWLATSH FVLGFFFFVG HLWHAGRARA AAAGFEKGID RDSEPVLSMT PLN* // ID AB086179_26 STANDARD; PRT; 101 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps14 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55347.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 54239 - 54541 FT DIRECTIONS : negative FT EDITING : 16 S(tCg) -> L(tTg) FT EDITING : 83 P(cCa) -> L(cTa) FT EDITING : 93 F(TTt) -> P(CCt) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atggcaaaaa aaagtcttat tcagagggag aaaaagagag aaaaatCgaa CD 51 gcagaagtac caggcttttc gtaaatattt gaaagaagag atgagccaaa CD 101 ctttatctat agataaaaag tgggaaatcc aaaagcaatt acaatctcta CD 151 ccacgtaata gtacacctac tcgtattcat cgtcgttgtt tcttaaccgg CD 201 aagacctaga gccaattatc gtgattttaa tttatctaga catatacCac CD 251 gtgagatgat tcatgcatgt ttattaTTtg gagtaacgaa agccagttgg CD 301 taa FT EDITED CDNA CD 1 atggcaaaaa aaagtcttat tcagagggag aaaaagagag aaaaatTgaa CD 51 gcagaagtac caggcttttc gtaaatattt gaaagaagag atgagccaaa CD 101 ctttatctat agataaaaag tgggaaatcc aaaagcaatt acaatctcta CD 151 ccacgtaata gtacacctac tcgtattcat cgtcgttgtt tcttaaccgg CD 201 aagacctaga gccaattatc gtgattttaa tttatctaga catatacTac CD 251 gtgagatgat tcatgcatgt ttattaCCtg gagtaacgaa agccagttgg CD 301 taa SQ SEQUENCE 101 AA; MAKKSLIQRE KKREKLKQKY QAFRKYLKEE MSQTLSIDKK WEIQKQLQSL PRNSTPTRIH RRCFLTGRPR ANYRDFNLSR HILREMIHAC LLPGVTKASW * // ID AB086179_27 STANDARD; PRT; 735 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psaB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55348.1 FT PROTEIN_NAME : photosystem I P700 apoprotein A2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 54680 - 56884 FT DIRECTIONS : negative FT EDITING : 5 F(ttC) -> F(ttT) FT EDITING : 44 *(Taa) -> Q(Caa) FT EDITING : 65 S(tCa) -> L(tTa) FT EDITING : 106 *(Tga) -> R(Cga) FT EDITING : 122 *(Taa) -> Q(Caa) FT EDITING : 126 I(aTa) -> T(aCa) FT EDITING : 175 P(cCC) -> L(cTT) FT EDITING : 187 F(tTt) -> S(tCt) FT EDITING : 255 P(cCa) -> L(cTa) FT EDITING : 277 Y(Tat) -> H(Cat) FT EDITING : 410 *(Tga) -> R(Cga) FT EDITING : 431 S(tCc) -> F(tTc) FT EDITING : 452 *(Taa) -> Q(Caa) FT EDITING : 501 T(aCc) -> I(aTc) FT EDITING : 581 S(tCt) -> F(tTt) FT EDITING : 586 M(aTg) -> T(aCg) FT EDITING : 590 V(gtC) -> V(gtT) FT EDITING : 714 P(Cct) -> S(Tct) FT EDITING : 719 S(tCt) -> F(tTt) FT EDITING : 733 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 2205 NT; CD 1 atggcatcaa gattCccaaa attcagccag ggtctatctc aagacccgac CD 51 tacccgtcgt atctggttcg gtattgctac cgcacatgac tttgagagtc CD 101 atgataatat tactgaagag cgtctttatT aaaagatttt tgcttctcat CD 151 ttcggtcaat tagccatcat ttttttatgg acctctggta attCatttca CD 201 tgtcgcttgg cagggtaatt tcgaggcgtg ggtacaagac cctttacatg CD 251 taagaccaat cgctcatgct atttgggatc cccattttgg tgaaccagct CD 301 gtagaagcct ttactTgagg aggagcttta ggtcccgtta atattgctta CD 351 ttctggggtc tatTaatggt ggtataTaat tggcttgcgc accattcaag CD 401 atctttatat tggagctctt tttctgttat tccttgctgc tgttttttta CD 451 atagcgggtt ggttacacct acaacctaaa tggaaaccaa gtgtttcatg CD 501 gtttaagaat gctgagtctc gtcCCaatca ccacttgtca ggactttttg CD 551 gagtaagttT tttagcctgg gcaggacatt taatacatgt agctattcct CD 601 gaatcaaggg gtgagcatgt aagatgggat aatctattaa ccgcattacc CD 651 acatcctcaa gggttaaaac ctttttttga aggtcaatgg ggtatttatg CD 701 ctgaaaatgc tgattcaagt agtcatttgt tcagtacttc tcaaggagca CD 751 ggtacagcta ttcCaacatt cattggcgga ttccatccac aaacccaaag CD 801 tttatggtta actgatattg ctcatcatTa tttagctatt gcagttgttt CD 851 ttattattgc tggtcacatg tatagaacca attttgggat tgggcatagc CD 901 ataaaagaaa ttttagaaac gcatactcct ccaggaggtc gtttaggtcg CD 951 aggacataag ggtctttatg atactatcaa taattccctt cattttcaac CD 1001 tgggtcttgc tttagcttct actggagtta ttacctcctt agtagctcaa CD 1051 catatgtatt ctttaccttc ttatgcatat atagcacaag acttcaccac CD 1101 ccaagctgcg ttgtatactc atcatcaata tattgcaggg tttattatga CD 1151 caggcgcttt cgctcatgga gctatctttt tcattagaga ctataatcca CD 1201 gaacaaaata aagataatgt tttagcgTga atgttagagc ataaagaagc CD 1251 tattatatct catttaagtt gggctagttt atttttgggt tCccatacct CD 1301 tgggactcta tgtccataat gatgttatgc ttgcctttgg taccccagaa CD 1351 aaaTaaatct taatcgagcc tgtatttgct caatggatac aatctgccca CD 1401 tggtaagact ctatatgggt ttgatctact tctatcttca gcggatagtc CD 1451 cagctttcaa tgctggtcaa agcatatggt tacctggttg gttagatgct CD 1501 aCcaataata atagtaattc actattctta actattggtc ctggtgactt CD 1551 tttggttcac catgctattg ctttgggctt gcatacgaca acactaattt CD 1601 tagtgaaagg tgctttggat gcacggggat ccaagctaat gcctgataaa CD 1651 aaagaatttg gttatagttt tccttgtgat ggtccaggaa gaggtggtac CD 1701 ttgtgatatt tcagcctggg atgcttttta tttagctgtt tCttggatgt CD 1751 taaacaTgat tggatgggtC accttttact ggcattggaa acatatcacc CD 1801 ctatggcaag gaaatgtagc tcagttcaat gaatcttcta cttatttgat CD 1851 gggatggttg agagactacc tatggttaaa ttcttcacaa cttattaatg CD 1901 gatataaccc atttggtatg aatagtttat ctgtatgggc atggatgttt CD 1951 ctatttggac atcttgtttg ggctactgga ttcatgttcc ttatttcatg CD 2001 gcgtgggtat tggcaagaac tcattgaaac tctaacatgg gctcatgagc CD 2051 gtacgccttt agctaatttg gtacgttgga gagataaacc agtagctctt CD 2101 tctattgttc aagcacgatt agttggatta acacatttcC ctgtaggcta CD 2151 tatctCtact tatgctgctt tcttaattgc ttccacatca ggtaaatCtg CD 2201 gttag FT EDITED CDNA CD 1 atggcatcaa gattTccaaa attcagccag ggtctatctc aagacccgac CD 51 tacccgtcgt atctggttcg gtattgctac cgcacatgac tttgagagtc CD 101 atgataatat tactgaagag cgtctttatC aaaagatttt tgcttctcat CD 151 ttcggtcaat tagccatcat ttttttatgg acctctggta attTatttca CD 201 tgtcgcttgg cagggtaatt tcgaggcgtg ggtacaagac cctttacatg CD 251 taagaccaat cgctcatgct atttgggatc cccattttgg tgaaccagct CD 301 gtagaagcct ttactCgagg aggagcttta ggtcccgtta atattgctta CD 351 ttctggggtc tatCaatggt ggtataCaat tggcttgcgc accattcaag CD 401 atctttatat tggagctctt tttctgttat tccttgctgc tgttttttta CD 451 atagcgggtt ggttacacct acaacctaaa tggaaaccaa gtgtttcatg CD 501 gtttaagaat gctgagtctc gtcTTaatca ccacttgtca ggactttttg CD 551 gagtaagttC tttagcctgg gcaggacatt taatacatgt agctattcct CD 601 gaatcaaggg gtgagcatgt aagatgggat aatctattaa ccgcattacc CD 651 acatcctcaa gggttaaaac ctttttttga aggtcaatgg ggtatttatg CD 701 ctgaaaatgc tgattcaagt agtcatttgt tcagtacttc tcaaggagca CD 751 ggtacagcta ttcTaacatt cattggcgga ttccatccac aaacccaaag CD 801 tttatggtta actgatattg ctcatcatCa tttagctatt gcagttgttt CD 851 ttattattgc tggtcacatg tatagaacca attttgggat tgggcatagc CD 901 ataaaagaaa ttttagaaac gcatactcct ccaggaggtc gtttaggtcg CD 951 aggacataag ggtctttatg atactatcaa taattccctt cattttcaac CD 1001 tgggtcttgc tttagcttct actggagtta ttacctcctt agtagctcaa CD 1051 catatgtatt ctttaccttc ttatgcatat atagcacaag acttcaccac CD 1101 ccaagctgcg ttgtatactc atcatcaata tattgcaggg tttattatga CD 1151 caggcgcttt cgctcatgga gctatctttt tcattagaga ctataatcca CD 1201 gaacaaaata aagataatgt tttagcgCga atgttagagc ataaagaagc CD 1251 tattatatct catttaagtt gggctagttt atttttgggt tTccatacct CD 1301 tgggactcta tgtccataat gatgttatgc ttgcctttgg taccccagaa CD 1351 aaaCaaatct taatcgagcc tgtatttgct caatggatac aatctgccca CD 1401 tggtaagact ctatatgggt ttgatctact tctatcttca gcggatagtc CD 1451 cagctttcaa tgctggtcaa agcatatggt tacctggttg gttagatgct CD 1501 aTcaataata atagtaattc actattctta actattggtc ctggtgactt CD 1551 tttggttcac catgctattg ctttgggctt gcatacgaca acactaattt CD 1601 tagtgaaagg tgctttggat gcacggggat ccaagctaat gcctgataaa CD 1651 aaagaatttg gttatagttt tccttgtgat ggtccaggaa gaggtggtac CD 1701 ttgtgatatt tcagcctggg atgcttttta tttagctgtt tTttggatgt CD 1751 taaacaCgat tggatgggtT accttttact ggcattggaa acatatcacc CD 1801 ctatggcaag gaaatgtagc tcagttcaat gaatcttcta cttatttgat CD 1851 gggatggttg agagactacc tatggttaaa ttcttcacaa cttattaatg CD 1901 gatataaccc atttggtatg aatagtttat ctgtatgggc atggatgttt CD 1951 ctatttggac atcttgtttg ggctactgga ttcatgttcc ttatttcatg CD 2001 gcgtgggtat tggcaagaac tcattgaaac tctaacatgg gctcatgagc CD 2051 gtacgccttt agctaatttg gtacgttgga gagataaacc agtagctctt CD 2101 tctattgttc aagcacgatt agttggatta acacatttcT ctgtaggcta CD 2151 tatctTtact tatgctgctt tcttaattgc ttccacatca ggtaaatTtg CD 2201 gttag SQ SEQUENCE 735 AA; MASRFPKFSQ GLSQDPTTRR IWFGIATAHD FESHDNITEE RLYQKIFASH FGQLAIIFLW TSGNLFHVAW QGNFEAWVQD PLHVRPIAHA IWDPHFGEPA VEAFTRGGAL GPVNIAYSGV YQWWYTIGLR TIQDLYIGAL FLLFLAAVFL IAGWLHLQPK WKPSVSWFKN AESRLNHHLS GLFGVSSLAW AGHLIHVAIP ESRGEHVRWD NLLTALPHPQ GLKPFFEGQW GIYAENADSS SHLFSTSQGA GTAILTFIGG FHPQTQSLWL TDIAHHHLAI AVVFIIAGHM YRTNFGIGHS IKEILETHTP PGGRLGRGHK GLYDTINNSL HFQLGLALAS TGVITSLVAQ HMYSLPSYAY IAQDFTTQAA LYTHHQYIAG FIMTGAFAHG AIFFIRDYNP EQNKDNVLAR MLEHKEAIIS HLSWASLFLG FHTLGLYVHN DVMLAFGTPE KQILIEPVFA QWIQSAHGKT LYGFDLLLSS ADSPAFNAGQ SIWLPGWLDA INNNSNSLFL TIGPGDFLVH HAIALGLHTT TLILVKGALD ARGSKLMPDK KEFGYSFPCD GPGRGGTCDI SAWDAFYLAV FWMLNTIGWV TFYWHWKHIT LWQGNVAQFN ESSTYLMGWL RDYLWLNSSQ LINGYNPFGM NSLSVWAWMF LFGHLVWATG FMFLISWRGY WQELIETLTW AHERTPLANL VRWRDKPVAL SIVQARLVGL THFSVGYIFT YAAFLIASTS GKFG* // ID AB086179_28 STANDARD; PRT; 751 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psaA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55349.1 FT PROTEIN_NAME : photosystem I P700 apoprotein A1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 56910 - 59162 FT DIRECTIONS : negative FT EDITING : 77 *(Taa) -> Q(Caa) FT EDITING : 96 P(Ccc) -> S(Tcc) FT EDITING : 136 *(Taa) -> Q(Caa) FT EDITING : 240 S(tCt) -> F(tTt) FT EDITING : 367 Y(Tac) -> H(Cac) FT EDITING : 531 S(tCc) -> F(tTc) FT EDITING : 605 T(aCt) -> I(aTt) FT EDITING : 606 S(tCt) -> F(tTt) FT EDITING : 655 *(Taa) -> Q(Caa) FT EDITING : 669 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 2253 NT; CD 1 atgaccattc gttcaccgga accagaagtc aagattgtag tggagaagga CD 51 tcctgtaaaa acctcttttg agaaatgggc taaacctgga catttttcaa CD 101 ggactttggc taaaggtcct agtaccacta cttggatttg gaatctacat CD 151 gctgatgctc atgatttcga tagccatact aatgatttag aagaagtttc CD 201 tcgcaaagtt tttagtgctc actttggtTa attagccatc atttttattt CD 251 ggttgagtgg aatgtatttc catggggcca gattcCccaa ttatgaagca CD 301 tggttaggtg atcctactca cattaaacct agtgcccaag ttgtttggcc CD 351 aatagtaggt caagaaattt tgaatggaga cgtaggtggt ggttttcaag CD 401 gaataTaaat aacctctggt tttttccaaa tttggcgagc atctggaata CD 451 actagtgaat tacaacttta ttctactgca attggtggat tgatcttcgc CD 501 ggcattaatg ctttttgctg gttggtttca ctatcataaa gctgctccca CD 551 aattagtttg gtttcaagat gtagaatcta tgttgaatca ccatctagct CD 601 gggttattgg gactaggttc tttagcttgg gcaggacatc aagtacacgt CD 651 ttctttaccc ataaatgaac ttttagatgc cggaatagat cctaaagaaa CD 701 tacctcttcc tcatgaatCt attttgaatc gtgacctctt agctcaactt CD 751 tttcccagtt tcgctaaagg attaactcca tttttcactt taaattggtc CD 801 agaatattca gattttctaa cctttcgtgg aggattaaat ccagtaacgg CD 851 gtggtttatg gctgactgat actgcacatc atcatttagc cattgcagtt CD 901 gttttcctag tagctggtca tatgtataga actaattggg gtattggaca CD 951 tagtataaag gaaattttgg aagctcataa aggtcctttt acaggtgaag CD 1001 gtcataaagg tctttatgag atcttaacca cttcatggca tgcccaatta CD 1051 gcccttaacc tagctatgtt gggttctcta actattatag tggctcacTa CD 1101 catgtattcc atgcctccgt atccatactt agctattgac tatagtactc CD 1151 aactctccct ttttacacat catatgtgga ttggtggatt tactatagtt CD 1201 ggcgctgccg cacacgcagc tatttttatg gtgagagatt atgatccaac CD 1251 tagccagtat aataatttac tggatcgcgt tcttagacat cgtgatgcaa CD 1301 tcatatcaca tctcaactgg gcatgtattt ttttaggttt tcatagtttc CD 1351 ggcttataca tccataatga tactatgagt gctttgggac gtcccgaaga CD 1401 catgttctca gatacagcta tacaactaca acccattttt gctcaatggg CD 1451 tgcagaacac tcatgtttta gcacctaatt taacggctcc caatgcaaca CD 1501 gcgagtacca gtttaacttg gggaggtggt gatttagtag cagtaggcgg CD 1551 taaagtagct ttgttaccaa tttctctagg aactgcagat tCcttagtgc CD 1601 accatattca tgcttttact atccatgtaa ctgttttgat attactgaaa CD 1651 ggtgtcttat ttgctcgtag ctctcgctta atacctgaca aagctaatct CD 1701 tggttttcgt tttccttgtg acggacctgg aagaggagga acatgtcaag CD 1751 tttctgcttg ggatcatgtt tttttaggtt tattctggat gtacaatgca CD 1801 atttctgtgg ttaCttCtca cttcagttgg aaaatgcaat cagatgtttg CD 1851 gggtagtttg agtaaccagg gagtagtcac tcatattaca gggggaaact CD 1901 ttgcacaaag ttcaataact atcaatggat ggcttcgcga ctttctatgg CD 1951 gcacaggccg ctTaagtaat ccaatcctac ggttcttcat tatctgcgta CD 2001 tggtcCctta tttttaggag ctcattttgt ttgggctttc agtttaatgt CD 2051 tcttatttag tggtcgcgga tactggcagg aactcattga atccattgtc CD 2101 tgggctcaca ataaactaaa agttgctcct gctatccagc ctagagcctt CD 2151 gagtattgta caaggacgtg ctgtaggagt agctcactac cttctaggtg CD 2201 ggattgccac aacatgggca ttctttctag caagaattat tgcagtagga CD 2251 taa FT EDITED CDNA CD 1 atgaccattc gttcaccgga accagaagtc aagattgtag tggagaagga CD 51 tcctgtaaaa acctcttttg agaaatgggc taaacctgga catttttcaa CD 101 ggactttggc taaaggtcct agtaccacta cttggatttg gaatctacat CD 151 gctgatgctc atgatttcga tagccatact aatgatttag aagaagtttc CD 201 tcgcaaagtt tttagtgctc actttggtCa attagccatc atttttattt CD 251 ggttgagtgg aatgtatttc catggggcca gattcTccaa ttatgaagca CD 301 tggttaggtg atcctactca cattaaacct agtgcccaag ttgtttggcc CD 351 aatagtaggt caagaaattt tgaatggaga cgtaggtggt ggttttcaag CD 401 gaataCaaat aacctctggt tttttccaaa tttggcgagc atctggaata CD 451 actagtgaat tacaacttta ttctactgca attggtggat tgatcttcgc CD 501 ggcattaatg ctttttgctg gttggtttca ctatcataaa gctgctccca CD 551 aattagtttg gtttcaagat gtagaatcta tgttgaatca ccatctagct CD 601 gggttattgg gactaggttc tttagcttgg gcaggacatc aagtacacgt CD 651 ttctttaccc ataaatgaac ttttagatgc cggaatagat cctaaagaaa CD 701 tacctcttcc tcatgaatTt attttgaatc gtgacctctt agctcaactt CD 751 tttcccagtt tcgctaaagg attaactcca tttttcactt taaattggtc CD 801 agaatattca gattttctaa cctttcgtgg aggattaaat ccagtaacgg CD 851 gtggtttatg gctgactgat actgcacatc atcatttagc cattgcagtt CD 901 gttttcctag tagctggtca tatgtataga actaattggg gtattggaca CD 951 tagtataaag gaaattttgg aagctcataa aggtcctttt acaggtgaag CD 1001 gtcataaagg tctttatgag atcttaacca cttcatggca tgcccaatta CD 1051 gcccttaacc tagctatgtt gggttctcta actattatag tggctcacCa CD 1101 catgtattcc atgcctccgt atccatactt agctattgac tatagtactc CD 1151 aactctccct ttttacacat catatgtgga ttggtggatt tactatagtt CD 1201 ggcgctgccg cacacgcagc tatttttatg gtgagagatt atgatccaac CD 1251 tagccagtat aataatttac tggatcgcgt tcttagacat cgtgatgcaa CD 1301 tcatatcaca tctcaactgg gcatgtattt ttttaggttt tcatagtttc CD 1351 ggcttataca tccataatga tactatgagt gctttgggac gtcccgaaga CD 1401 catgttctca gatacagcta tacaactaca acccattttt gctcaatggg CD 1451 tgcagaacac tcatgtttta gcacctaatt taacggctcc caatgcaaca CD 1501 gcgagtacca gtttaacttg gggaggtggt gatttagtag cagtaggcgg CD 1551 taaagtagct ttgttaccaa tttctctagg aactgcagat tTcttagtgc CD 1601 accatattca tgcttttact atccatgtaa ctgttttgat attactgaaa CD 1651 ggtgtcttat ttgctcgtag ctctcgctta atacctgaca aagctaatct CD 1701 tggttttcgt tttccttgtg acggacctgg aagaggagga acatgtcaag CD 1751 tttctgcttg ggatcatgtt tttttaggtt tattctggat gtacaatgca CD 1801 atttctgtgg ttaTttTtca cttcagttgg aaaatgcaat cagatgtttg CD 1851 gggtagtttg agtaaccagg gagtagtcac tcatattaca gggggaaact CD 1901 ttgcacaaag ttcaataact atcaatggat ggcttcgcga ctttctatgg CD 1951 gcacaggccg ctCaagtaat ccaatcctac ggttcttcat tatctgcgta CD 2001 tggtcTctta tttttaggag ctcattttgt ttgggctttc agtttaatgt CD 2051 tcttatttag tggtcgcgga tactggcagg aactcattga atccattgtc CD 2101 tgggctcaca ataaactaaa agttgctcct gctatccagc ctagagcctt CD 2151 gagtattgta caaggacgtg ctgtaggagt agctcactac cttctaggtg CD 2201 ggattgccac aacatgggca ttctttctag caagaattat tgcagtagga CD 2251 taa SQ SEQUENCE 751 AA; MTIRSPEPEV KIVVEKDPVK TSFEKWAKPG HFSRTLAKGP STTTWIWNLH ADAHDFDSHT NDLEEVSRKV FSAHFGQLAI IFIWLSGMYF HGARFSNYEA WLGDPTHIKP SAQVVWPIVG QEILNGDVGG GFQGIQITSG FFQIWRASGI TSELQLYSTA IGGLIFAALM LFAGWFHYHK AAPKLVWFQD VESMLNHHLA GLLGLGSLAW AGHQVHVSLP INELLDAGID PKEIPLPHEF ILNRDLLAQL FPSFAKGLTP FFTLNWSEYS DFLTFRGGLN PVTGGLWLTD TAHHHLAIAV VFLVAGHMYR TNWGIGHSIK EILEAHKGPF TGEGHKGLYE ILTTSWHAQL ALNLAMLGSL TIIVAHHMYS MPPYPYLAID YSTQLSLFTH HMWIGGFTIV GAAAHAAIFM VRDYDPTSQY NNLLDRVLRH RDAIISHLNW ACIFLGFHSF GLYIHNDTMS ALGRPEDMFS DTAIQLQPIF AQWVQNTHVL APNLTAPNAT ASTSLTWGGG DLVAVGGKVA LLPISLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNA ISVVIFHFSW KMQSDVWGSL SNQGVVTHIT GGNFAQSSIT INGWLRDFLW AQAAQVIQSY GSSLSAYGLL FLGAHFVWAF SLMFLFSGRG YWQELIESIV WAHNKLKVAP AIQPRALSIV QGRAVGVAHY LLGGIATTWA FFLARIIAVG * // ID AB086179_29 STANDARD; PRT; 171 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ycf3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55350.1 FT PROTEIN_NAME : Ycf3 protein FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 42/1 FT INTRON 119/0 FT EDITING : 10 S(tCt) -> F(tTt) FT EDITING : 22 S(tCa) -> L(tTa) FT EDITING : 30 *(Taa) -> Q(Caa) FT EDITING : 36 S(tCt) -> F(tTt) FT EDITING : 55 S(tCa) -> L(tTa) FT EDITING : 71 *(Tga) -> R(Cga) FT EDITING : 76 H(Cat) -> Y(Tat) FT EDITING : 92 S(tCg) -> L(tTg) FT EDITING : 95 H(Cat) -> Y(Tat) FT EDITING : 105 P(cCg) -> L(cTg) FT EDITING : 106 L(cTa) -> P(cCa) FT EDITING : 109 P(cCa) -> L(cTa) FT EDITING : 115 T(aCc) -> I(aTc) FT EDITING : 138 *(Taa) -> Q(Caa) FT EDITING : 146 V(gTg) -> A(gCg) FT EDITING : 151 L(cTa) -> P(cCa) FT CODON_START : 1 CL CDNALEN 513 NT; CD 1 atgcctagat ctcaaaagaa tgataattCt atcgataaaa ctttcacaat CD 51 tatagcggat atttCattac agataatccc aacgactTaa agggaaaaag CD 101 aagcttCtac tcattacaga gatggaatgt cggctcaatc agaaggagaa CD 151 tatgcggaag cctCacagaa ttattatgaa gctatgcgct tagaaattga CD 201 tccttatgat Tgaagttata tattaCataa tataggtctt attcacacaa CD 251 gtaatgggga acacgctaag gcttCggagt atCattttca ggcattggaa CD 301 cgaaactcat cccCgcTaca agctcCaaat aatatggctg ttaCctgtca CD 351 ttaccgagga gagcaagcca ttgaggaagg agatcctgaa acttgcgaag CD 401 tctggtttga tTaagctgct gattattgga aaaaagTgat atcgctagct CD 451 cTaagtaatt atatcgaagc acagaattgg ctaagaatta caggacgttc CD 501 caaaatcaaa taa FT EDITED CDNA CD 1 atgcctagat ctcaaaagaa tgataattTt atcgataaaa ctttcacaat CD 51 tatagcggat atttTattac agataatccc aacgactCaa agggaaaaag CD 101 aagcttTtac tcattacaga gatggaatgt cggctcaatc agaaggagaa CD 151 tatgcggaag cctTacagaa ttattatgaa gctatgcgct tagaaattga CD 201 tccttatgat Cgaagttata tattaTataa tataggtctt attcacacaa CD 251 gtaatgggga acacgctaag gcttTggagt atTattttca ggcattggaa CD 301 cgaaactcat cccTgcCaca agctcTaaat aatatggctg ttaTctgtca CD 351 ttaccgagga gagcaagcca ttgaggaagg agatcctgaa acttgcgaag CD 401 tctggtttga tCaagctgct gattattgga aaaaagCgat atcgctagct CD 451 cCaagtaatt atatcgaagc acagaattgg ctaagaatta caggacgttc CD 501 caaaatcaaa taa SQ SEQUENCE 171 AA; MPRSQKNDNF IDKTFTIIAD ILLQIIPTTQ REKEAFTHYR DGMSAQSEGE YAEALQNYYE AMRLEIDPYD RSYILYNIGL IHTSNGEHAK ALEYYFQALE RNSSLPQALN NMAVICHYRG EQAIEEGDPE TCEVWFDQAA DYWKKAISLA PSNYIEAQNW LRITGRSKIK * // ID AB086179_30 STANDARD; PRT; 203 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55351.1 FT PROTEIN_NAME : ribosomal protein S4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 63339 - 63947 FT DIRECTIONS : negative FT EDITING : 64 *(Tga) -> R(Cga) FT EDITING : 79 L(tTa) -> S(tCa) FT EDITING : 91 C(Tgt) -> R(Cgt) FT EDITING : 97 S(tCt) -> F(tTt) FT EDITING : 98 *(Tga) -> R(Cga) FT EDITING : 127 L(cTa) -> P(cCa) FT EDITING : 137 T(aCt) -> I(aTt) FT EDITING : 142 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 609 NT; CD 1 atgtctcgtt accgaggacc tcgtgtaaga ataatacgtc gtctggggac CD 51 tctaccagga ctgactagta aaacacccga atcaaaacct agttatatta CD 101 atcaatctac atctagtaga aaaatatccc aataccgcat tcgtttggaa CD 151 gaaaaacaga aactacgttt tcactatgga attacagagT gacaattact CD 201 taagtatgtt cgtattgcta gaaaagcaaa aggatTaaca ggacaggttt CD 251 tgttacaatt acttgagatg Tgtttagata atattatttC tTgattaggt CD 301 ctggctccca ctattccggg agctagacaa ttagttaacc atagacacgt CD 351 tttagtcaat gattgtactg tagacatacT aagttttcgt tgtaaacctc CD 401 aagacgttaC tactatacgg gatTgacaaa aatctcagaa tctaatgaag CD 451 aggagtaggg attcttacga gaagtatgga ataccaaatc atttaacttt CD 501 taattctgta cagaatatag ggttagttaa tgaaactata gatcgtgact CD 551 ggattggttt aaaaataaac gaattattag tggtagaata ttattctcgt CD 601 caagcttaa FT EDITED CDNA CD 1 atgtctcgtt accgaggacc tcgtgtaaga ataatacgtc gtctggggac CD 51 tctaccagga ctgactagta aaacacccga atcaaaacct agttatatta CD 101 atcaatctac atctagtaga aaaatatccc aataccgcat tcgtttggaa CD 151 gaaaaacaga aactacgttt tcactatgga attacagagC gacaattact CD 201 taagtatgtt cgtattgcta gaaaagcaaa aggatCaaca ggacaggttt CD 251 tgttacaatt acttgagatg Cgtttagata atattatttT tCgattaggt CD 301 ctggctccca ctattccggg agctagacaa ttagttaacc atagacacgt CD 351 tttagtcaat gattgtactg tagacatacC aagttttcgt tgtaaacctc CD 401 aagacgttaT tactatacgg gatCgacaaa aatctcagaa tctaatgaag CD 451 aggagtaggg attcttacga gaagtatgga ataccaaatc atttaacttt CD 501 taattctgta cagaatatag ggttagttaa tgaaactata gatcgtgact CD 551 ggattggttt aaaaataaac gaattattag tggtagaata ttattctcgt CD 601 caagcttaa SQ SEQUENCE 203 AA; MSRYRGPRVR IIRRLGTLPG LTSKTPESKP SYINQSTSSR KISQYRIRLE EKQKLRFHYG ITERQLLKYV RIARKAKGST GQVLLQLLEM RLDNIIFRLG LAPTIPGARQ LVNHRHVLVN DCTVDIPSFR CKPQDVITIR DRQKSQNLMK RSRDSYEKYG IPNHLTFNSV QNIGLVNETI DRDWIGLKIN ELLVVEYYSR QA* // ID AB086179_31 STANDARD; PRT; 170 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhJ FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55352.1 FT PROTEIN_NAME : NADH dehydrogenase 30 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 66629 - 67138 FT DIRECTIONS : negative FT EDITING : 20 P(cCa) -> L(cTa) FT EDITING : 59 S(tCt) -> F(tTt) FT EDITING : 64 P(Ccc) -> S(Tcc) FT EDITING : 72 L(cTa) -> P(cCa) FT EDITING : 82 P(cCt) -> L(cTt) FT EDITING : 110 F(tTt) -> S(tCt) FT CODON_START : 1 CL CDNALEN 510 NT; CD 1 atgttagaaa cttttactaa tgataccaat gaaatacaag gtcgattatc CD 51 tgcttggcCa attaaacata gattagctca tagacctttg ggttttgatt CD 101 accaaggtgt agaaactttg caagttaggt ctgaggattg gctttctata CD 151 gctgttgctt tatatgctta tggttCtaat tatcttcgtC cccaatgcgt CD 201 atatgatgta gctcTagggg gattactagc tagtgtgtat catcCtacaa CD 251 aggtacagag taatgcggat caacctgaag aagtatgtat aaagattttt CD 301 gtatcaagga aaaatcctaa aattccatTt gttttttggg tttggaaagg CD 351 cgcagatttt caagaacgag aatcttatga tatgttggga atctcttatg CD 401 agagtcaccc acgtcttaaa cgtattttga tgcctgacag ttggattgga CD 451 tggcctttac gcaaagatta tattgtacct aacttttatg agctgcagga CD 501 tgcttattga FT EDITED CDNA CD 1 atgttagaaa cttttactaa tgataccaat gaaatacaag gtcgattatc CD 51 tgcttggcTa attaaacata gattagctca tagacctttg ggttttgatt CD 101 accaaggtgt agaaactttg caagttaggt ctgaggattg gctttctata CD 151 gctgttgctt tatatgctta tggttTtaat tatcttcgtT cccaatgcgt CD 201 atatgatgta gctcCagggg gattactagc tagtgtgtat catcTtacaa CD 251 aggtacagag taatgcggat caacctgaag aagtatgtat aaagattttt CD 301 gtatcaagga aaaatcctaa aattccatCt gttttttggg tttggaaagg CD 351 cgcagatttt caagaacgag aatcttatga tatgttggga atctcttatg CD 401 agagtcaccc acgtcttaaa cgtattttga tgcctgacag ttggattgga CD 451 tggcctttac gcaaagatta tattgtacct aacttttatg agctgcagga CD 501 tgcttattga SQ SEQUENCE 170 AA; MLETFTNDTN EIQGRLSAWL IKHRLAHRPL GFDYQGVETL QVRSEDWLSI AVALYAYGFN YLRSQCVYDV APGGLLASVY HLTKVQSNAD QPEEVCIKIF VSRKNPKIPS VFWVWKGADF QERESYDMLG ISYESHPRLK RILMPDSWIG WPLRKDYIVP NFYELQDAY* // ID AB086179_32 STANDARD; PRT; 248 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhK FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55353.2 FT PROTEIN_NAME : NADH dehydrogenase 27 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 67188 - 67931 FT DIRECTIONS : negative FT EDITING : 35 T(aCt) -> I(aTt) FT EDITING : 117 S(Tct) -> P(Cct) FT EDITING : 128 T(aCt) -> I(aTt) FT EDITING : 133 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 744 NT; CD 1 atggtctcag ttcctaaata tttaaatttt gaaagtgatc ttgcggagtc CD 51 tgtgacaaat tctatggatt cttccttacc tgatgaaacc acttcagact CD 101 caaCtatttt aacaaccttt aatgatttct caaattgggc taggctctcc CD 151 agtttatggc cactccttta tggtactagt tgttgcttca tcgaattcgc CD 201 ttcgttaatt ggctcgcgat tcgattttga tcgttatggc ttggtaccaa CD 251 gatctagtcc cagacaagcc gatcttataa taacagctgg aactgttact CD 301 atgaaaatgg ctccttcttt agtaaggttg tatgaacaga tgcccgaaTc CD 351 taaatatgta attgctatgg gagcatgtac taCtacagga ggtatgtCta CD 401 gcacagattc atatagcaca gttcgtgggg tggataaatt aattcccgta CD 451 gacatttatt tgcctggttg tccaccaaaa ccagaagcta ttatagatgc CD 501 tataataaaa cttcgtaaag gagtagctcg ggaggtacat gaacgtaagg CD 551 ataagcttag acaaacaaga aggtatttca ctctgaatca ccagttagag CD 601 attgtaccta tcattcatac tggtaagtat gacgaacact tattctccaa CD 651 gttttccgaa atttccattg aacctaaatt gaatgtatct cctcaaagaa CD 701 ttgagaaatc gaaaagttca atatcttccc aaatatcctt ttaa FT EDITED CDNA CD 1 atggtctcag ttcctaaata tttaaatttt gaaagtgatc ttgcggagtc CD 51 tgtgacaaat tctatggatt cttccttacc tgatgaaacc acttcagact CD 101 caaTtatttt aacaaccttt aatgatttct caaattgggc taggctctcc CD 151 agtttatggc cactccttta tggtactagt tgttgcttca tcgaattcgc CD 201 ttcgttaatt ggctcgcgat tcgattttga tcgttatggc ttggtaccaa CD 251 gatctagtcc cagacaagcc gatcttataa taacagctgg aactgttact CD 301 atgaaaatgg ctccttcttt agtaaggttg tatgaacaga tgcccgaaCc CD 351 taaatatgta attgctatgg gagcatgtac taTtacagga ggtatgtTta CD 401 gcacagattc atatagcaca gttcgtgggg tggataaatt aattcccgta CD 451 gacatttatt tgcctggttg tccaccaaaa ccagaagcta ttatagatgc CD 501 tataataaaa cttcgtaaag gagtagctcg ggaggtacat gaacgtaagg CD 551 ataagcttag acaaacaaga aggtatttca ctctgaatca ccagttagag CD 601 attgtaccta tcattcatac tggtaagtat gacgaacact tattctccaa CD 651 gttttccgaa atttccattg aacctaaatt gaatgtatct cctcaaagaa CD 701 ttgagaaatc gaaaagttca atatcttccc aaatatcctt ttaa SQ SEQUENCE 248 AA; MVSVPKYLNF ESDLAESVTN SMDSSLPDET TSDSIILTTF NDFSNWARLS SLWPLLYGTS CCFIEFASLI GSRFDFDRYG LVPRSSPRQA DLIITAGTVT MKMAPSLVRL YEQMPEPKYV IAMGACTITG GMFSTDSYST VRGVDKLIPV DIYLPGCPPK PEAIIDAIIK LRKGVAREVH ERKDKLRQTR RYFTLNHQLE IVPIIHTGKY DEHLFSKFSE ISIEPKLNVS PQRIEKSKSS ISSQISF* // ID AB086179_33 STANDARD; PRT; 121 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55354.1 FT PROTEIN_NAME : NADH dehydrogenase ND3 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 67922 - 68284 FT DIRECTIONS : negative FT EDITING : 56 I(atC) -> I(atT) FT EDITING : 59 *(Taa) -> Q(Caa) FT EDITING : 78 S(tCt) -> F(tTt) FT EDITING : 94 S(tCt) -> F(tTt) FT EDITING : 98 S(tCc) -> F(tTc) FT EDITING : 102 S(tCc) -> F(tTc) FT EDITING : 121 Q(Cag) -> *(Tag) FT CODON_START : 1 CL CDNALEN 363 NT; CD 1 atgtttttag tctccaaata taactatttc tggatatttc tcctaatagc CD 51 tagtcttatt cctactatag cattctctat ttccagagtt atagcaccta CD 101 ttagtaaagg accagaaaaa tttactagtt atgaatgtgg tatagaacct CD 151 atgggagatg cttggatCca atttTaaatt cgttattata tgtttgcttt CD 201 agttttcgtt atttttgatg ttgaaactgt ttCtctctat ccatgggcta CD 251 tgagttttaa gcaactgggt atacctgctt Ctattgaagt ctCcattttt CD 301 gtttCcattc taattattgg tttgatttac gcatggcgaa aaggagcatt CD 351 agaatggtct Cag FT EDITED CDNA CD 1 atgtttttag tctccaaata taactatttc tggatatttc tcctaatagc CD 51 tagtcttatt cctactatag cattctctat ttccagagtt atagcaccta CD 101 ttagtaaagg accagaaaaa tttactagtt atgaatgtgg tatagaacct CD 151 atgggagatg cttggatTca atttCaaatt cgttattata tgtttgcttt CD 201 agttttcgtt atttttgatg ttgaaactgt ttTtctctat ccatgggcta CD 251 tgagttttaa gcaactgggt atacctgctt Ttattgaagt ctTcattttt CD 301 gtttTcattc taattattgg tttgatttac gcatggcgaa aaggagcatt CD 351 agaatggtct Tag SQ SEQUENCE 121 AA; MFLVSKYNYF WIFLLIASLI PTIAFSISRV IAPISKGPEK FTSYECGIEP MGDAWIQFQI RYYMFALVFV IFDVETVFLY PWAMSFKQLG IPAFIEVFIF VFILIIGLIY AWRKGALEWS * // ID AB086179_34 STANDARD; PRT; 139 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : atpE FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55355.1 FT PROTEIN_NAME : ATPase epsilon subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 69871 - 70287 FT DIRECTIONS : negative FT EDITING : 4 N(aaT) -> N(aaC) FT EDITING : 24 P(cCa) -> L(cTa) FT EDITING : 30 *(Taa) -> Q(Caa) FT EDITING : 52 C(Tgt) -> R(Cgt) FT EDITING : 70 D(gaT) -> D(gaC) FT CODON_START : 1 CL CDNALEN 417 NT; CD 1 atgactttaa aTcttcgtgt aatggctcct aatagaattg tttggaattc CD 51 agaggttgaa gagattgttc Catctactaa tagtggtTaa attggcgtat CD 101 tacccaatca tgctccactt cttaccgcat tagatatagg aattattaaa CD 151 ataTgtctta atggagaatg gtccactatg gcgttaatgg gtggttttgc CD 201 tatgatagaT aataatggaa tgactatttt ggttaatgag gcagaaaaag CD 251 ccactgaaat aaatcctcaa gaggctcgag aaaattataa aatggctcaa CD 301 aaagatttag ctaaagctga gggtgggaaa caaaaaattg aagccaattt CD 351 agctttcaag agagctaagg cacgattaga agctattgat gttatatcat CD 401 ttcctgtttc aaattaa FT EDITED CDNA CD 1 atgactttaa aCcttcgtgt aatggctcct aatagaattg tttggaattc CD 51 agaggttgaa gagattgttc Tatctactaa tagtggtCaa attggcgtat CD 101 tacccaatca tgctccactt cttaccgcat tagatatagg aattattaaa CD 151 ataCgtctta atggagaatg gtccactatg gcgttaatgg gtggttttgc CD 201 tatgatagaC aataatggaa tgactatttt ggttaatgag gcagaaaaag CD 251 ccactgaaat aaatcctcaa gaggctcgag aaaattataa aatggctcaa CD 301 aaagatttag ctaaagctga gggtgggaaa caaaaaattg aagccaattt CD 351 agctttcaag agagctaagg cacgattaga agctattgat gttatatcat CD 401 ttcctgtttc aaattaa SQ SEQUENCE 139 AA; MTLNLRVMAP NRIVWNSEVE EIVLSTNSGQ IGVLPNHAPL LTALDIGIIK IRLNGEWSTM ALMGGFAMID NNGMTILVNE AEKATEINPQ EARENYKMAQ KDLAKAEGGK QKIEANLAFK RAKARLEAID VISFPVSN* // ID AB086179_35 STANDARD; PRT; 493 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : atpB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55356.1 FT PROTEIN_NAME : ATPase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 70293 - 71771 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 65 *(Taa) -> Q(Caa) FT EDITING : 139 *(Taa) -> Q(Caa) FT EDITING : 159 S(Tct) -> P(Cct) FT EDITING : 162 C(Tgt) -> R(Cgt) FT EDITING : 168 P(cCa) -> L(cTa) FT EDITING : 249 S(tCa) -> L(tTa) FT EDITING : 251 V(gTt) -> A(gCt) FT EDITING : 267 S(TCt) -> L(CTt) FT EDITING : 274 L(Ctt) -> F(Ttt) FT EDITING : 275 C(Tgt) -> R(Cgt) FT EDITING : 286 S(tCa) -> L(tTa) FT EDITING : 287 S(tCa) -> L(tTa) FT EDITING : 313 P(Cca) -> S(Tca) FT EDITING : 329 V(gTt) -> A(gCt) FT EDITING : 335 S(Tct) -> P(Cct) FT EDITING : 344 S(tCa) -> L(tTa) FT EDITING : 351 F(tTt) -> S(tCt) FT EDITING : 361 L(cTt) -> P(cCt) FT EDITING : 362 V(gTc) -> A(gCc) FT EDITING : 370 F(tTt) -> S(tCt) FT EDITING : 405 T(aCt) -> I(aTt) FT EDITING : 408 S(tCa) -> L(tTa) FT EDITING : 411 S(tCa) -> L(tTa) FT EDITING : 439 S(tCt) -> F(tTt) FT EDITING : 470 *(Taa) -> Q(Caa) FT EDITING : 472 S(tCt) -> F(tTt) FT EDITING : 478 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 1479 NT; CD 1 aCgaaaacaa attatcttat tcttggagtt tctacactta tctccaagaa CD 51 tgtggggcat attagtcaga taatcggacc agtactagat gtaacttttc CD 101 ctccaggtaa aatgcctaat atttacaatt ctttaatagt ccgaggtcaa CD 151 aatccagctg gtcaagagat taatgttact tgtgaagtac aaTaattatt CD 201 agggaataat aaggttaggg ctgtagcaat gagtgctaca gatggtttga CD 251 caaggggaat gaaagttact gatactggag cccccttaag tgttccagtc CD 301 ggtgaagtta ctcttggacg aattttcaat gttcttggag aacctgttga CD 351 taatttaggt gctatagatg ttagcacaac atttcctatt catagatctg CD 401 cccctgcctt tacaTaatta gatactaaat tatccatctt tgaaacagga CD 451 attaaagtag tagatctgtt agctTcttat cgtTgtggag gaaagattgg CD 501 acCatttgga ggagctggag taggaaaaac ggtactcatt atggagttga CD 551 ttaataacat agctaaagct catggaggtg tatccgtttt tggtggagta CD 601 ggggaacgta cccgtgaagg aaacgatctt tatatggaaa tgaaagaatc CD 651 gaaagttatt aatgagcaag atatttcaga atcaaaagta gcactagtct CD 701 atggtcagat gaatgagcct ccaggggcgc gtatgagagt tggttCaact CD 751 gTtttaacta tggctgagta ttttcgagat gttaataagc aagacgtaTC CD 801 tttatttatt gataatattC ttTgtttcgt tcaagcagga tcagaagttt CD 851 ctgcttCatC aggtagaatg ccctccgctg taggttatca accaactttg CD 901 agcacagaaa tgggttcttt acaggaaaga attactCcaa caaaagaagg CD 951 atctataaca tcaattcaag ctgtttatgt acctgTtgat gatttgactg CD 1001 acTctgctcc tgctacaaca ttcgctcact Cagatgctac cactgtatta CD 1051 tTtagaggat tagctgccaa aggtatatat cTtgTcgtag atcctttaga CD 1101 ttcaacttTt acgatgcttc aaccctggat tgtaggcgaa gagcattacg CD 1151 agacagcaca aggagttaaa caaaccttac aacgttataa ggaactgcaa CD 1201 gatattatag ctaCtcttgg atCagacgaa tCatcggagg aggatcgttt CD 1251 aactgtagcg agagcacgca aaatagaacg ttttttatca caaccttttt CD 1301 ttgtggcaga ggtttCtacg ggttctccag gtaaatatgt aagtcttatt CD 1351 gaaacaatca agggttttca aatgattctt gctggagaat tagatggtct CD 1401 tcctgaaTaa gcttCttatt tagttggtaa taCtgatgaa gttactgcga CD 1451 aggctgaaac cttacaaatg gagagttga FT EDITED CDNA CD 1 aTgaaaacaa attatcttat tcttggagtt tctacactta tctccaagaa CD 51 tgtggggcat attagtcaga taatcggacc agtactagat gtaacttttc CD 101 ctccaggtaa aatgcctaat atttacaatt ctttaatagt ccgaggtcaa CD 151 aatccagctg gtcaagagat taatgttact tgtgaagtac aaCaattatt CD 201 agggaataat aaggttaggg ctgtagcaat gagtgctaca gatggtttga CD 251 caaggggaat gaaagttact gatactggag cccccttaag tgttccagtc CD 301 ggtgaagtta ctcttggacg aattttcaat gttcttggag aacctgttga CD 351 taatttaggt gctatagatg ttagcacaac atttcctatt catagatctg CD 401 cccctgcctt tacaCaatta gatactaaat tatccatctt tgaaacagga CD 451 attaaagtag tagatctgtt agctCcttat cgtCgtggag gaaagattgg CD 501 acTatttgga ggagctggag taggaaaaac ggtactcatt atggagttga CD 551 ttaataacat agctaaagct catggaggtg tatccgtttt tggtggagta CD 601 ggggaacgta cccgtgaagg aaacgatctt tatatggaaa tgaaagaatc CD 651 gaaagttatt aatgagcaag atatttcaga atcaaaagta gcactagtct CD 701 atggtcagat gaatgagcct ccaggggcgc gtatgagagt tggttTaact CD 751 gCtttaacta tggctgagta ttttcgagat gttaataagc aagacgtaCT CD 801 tttatttatt gataatattT ttCgtttcgt tcaagcagga tcagaagttt CD 851 ctgcttTatT aggtagaatg ccctccgctg taggttatca accaactttg CD 901 agcacagaaa tgggttcttt acaggaaaga attactTcaa caaaagaagg CD 951 atctataaca tcaattcaag ctgtttatgt acctgCtgat gatttgactg CD 1001 acCctgctcc tgctacaaca ttcgctcact Tagatgctac cactgtatta CD 1051 tCtagaggat tagctgccaa aggtatatat cCtgCcgtag atcctttaga CD 1101 ttcaacttCt acgatgcttc aaccctggat tgtaggcgaa gagcattacg CD 1151 agacagcaca aggagttaaa caaaccttac aacgttataa ggaactgcaa CD 1201 gatattatag ctaTtcttgg atTagacgaa tTatcggagg aggatcgttt CD 1251 aactgtagcg agagcacgca aaatagaacg ttttttatca caaccttttt CD 1301 ttgtggcaga ggtttTtacg ggttctccag gtaaatatgt aagtcttatt CD 1351 gaaacaatca agggttttca aatgattctt gctggagaat tagatggtct CD 1401 tcctgaaCaa gcttTttatt tagttggtaa taTtgatgaa gttactgcga CD 1451 aggctgaaac cttacaaatg gagagttga SQ SEQUENCE 493 AA; MKTNYLILGV STLISKNVGH ISQIIGPVLD VTFPPGKMPN IYNSLIVRGQ NPAGQEINVT CEVQQLLGNN KVRAVAMSAT DGLTRGMKVT DTGAPLSVPV GEVTLGRIFN VLGEPVDNLG AIDVSTTFPI HRSAPAFTQL DTKLSIFETG IKVVDLLAPY RRGGKIGLFG GAGVGKTVLI MELINNIAKA HGGVSVFGGV GERTREGNDL YMEMKESKVI NEQDISESKV ALVYGQMNEP PGARMRVGLT ALTMAEYFRD VNKQDVLLFI DNIFRFVQAG SEVSALLGRM PSAVGYQPTL STEMGSLQER ITSTKEGSIT SIQAVYVPAD DLTDPAPATT FAHLDATTVL SRGLAAKGIY PAVDPLDSTS TMLQPWIVGE EHYETAQGVK QTLQRYKELQ DIIAILGLDE LSEEDRLTVA RARKIERFLS QPFFVAEVFT GSPGKYVSLI ETIKGFQMIL AGELDGLPEQ AFYLVGNIDE VTAKAETLQM ES* // ID AB086179_36 STANDARD; PRT; 476 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rbcL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55357.1 FT PROTEIN_NAME : ribulose-1,5-bisphosphate carboxylase/oxygenase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 72912 - 74339 FT DIRECTIONS : positive FT EDITING : 24 H(Cat) -> Y(Tat) FT EDITING : 40 S(tCt) -> F(tTt) FT EDITING : 41 *(Tga) -> R(Cga) FT EDITING : 45 *(Taa) -> Q(Caa) FT EDITING : 101 A(gCt) -> V(gTt) FT EDITING : 104 S(Tct) -> P(Cct) FT EDITING : 133 S(tCa) -> L(tTa) FT EDITING : 138 S(tCa) -> L(tTa) FT EDITING : 162 S(tCg) -> L(tTg) FT EDITING : 226 S(tCt) -> F(tTt) FT EDITING : 275 I(aTt) -> T(aCt) FT EDITING : 301 T(aCC) -> I(aTT) FT EDITING : 314 S(tCa) -> L(tTa) FT EDITING : 318 S(tCa) -> L(tTa) FT EDITING : 328 P(Cca) -> S(Tca) FT EDITING : 339 C(Tgt) -> R(Cgt) FT EDITING : 349 P(cCt) -> L(cTt) FT EDITING : 350 C(Tgt) -> R(Cgt) FT EDITING : 376 L(cTc) -> P(cCc) FT CODON_START : 1 CL CDNALEN 1428 NT; CD 1 atgtcaccac aaacggagac taaagcaggt gttggattta aagctggtgt CD 51 taaagattat agattaaccC attatacccc tgattacgag accaaggata CD 101 ctgatatttt ggcagcgtCt Tgaatgactc ctTaaccagg ggtgccacct CD 151 gaagaagcag gagccgcagt agctgctgaa tcttcaactg gtacatggac CD 201 tactgtttgg accgatggac ttaccagcct tgaccgttac aaaggtcgat CD 251 gctacgacat tgaacctgtt gctggagagg aaaatcaata tattgcttat CD 301 gCtgcttatT ctttagattt gtttgaggag ggttctgtta ccaacatgtt CD 351 cacttccatt gtaggtaatg tttttggatt taaagcttta cgagcttCac CD 401 gtctagaaga ttCacgaatt ccacctgctt attccaaaac ctttcaaggt CD 451 ccacctcatg gtattcaagt tgaaagagat aaatCgaata aatatggtcg CD 501 tcctttatta ggatgtacca ttaaaccaaa gttaggttta tctgccaaaa CD 551 actatggtag agctgtatat gaatgtcttc gtggtggact tgatttcacc CD 601 aaagatgacg aaaatgttaa ttctcaacct tttatgcgtt ggagagatcg CD 651 ttttctattc gtagcagaag ctatttCtaa atctcaagct gaaacagggg CD 701 agattaaagg gcattactta aatgccactg caggtacatg tgaggaaatg CD 751 atgaaaaggg cacattttgc tagagaatta ggaatgccta tcgtaatgca CD 801 tgattatttg acaggaggtt ttaTtgcaaa tacgaccctg gctcgttatt CD 851 gtagagacaa tggtttactt cttcatattc atcgtgccat gcatgcagtt CD 901 aCCgacagac aaagaaatca tggtattcac tttcgtgtat Cagctaaagc CD 951 atCacgtatg tccgggggag atcatattca tCcaggtaca gtagtaggta CD 1001 aattagaggg agaaTgtgaa gtaactttag gttttgtgga tttacCtTgt CD 1051 gacgattata ttgaaaaaga tagaagtcgt gggatatatt ttactcaaga CD 1101 ctgggtctct atgcctggtg ttttgcTcgt ggcttcaggt ggtattcatg CD 1151 tttggcatat gtcagcttta actgagattt tcggagatga ttccgtacta CD 1201 cagtttggcg ggggaactct aggacaccct tggggaaatg cacctggtgc CD 1251 agtagctaat cgagttgctt tagaagcttg tgtgcaagct cgtaatgaag CD 1301 gacgtgatct tgctcgcgag ggtaatgata ttatccgtga agctagtaaa CD 1351 tggagtcctg aattagcagc tgcttgtgaa gtatggaaag aaattaaatt CD 1401 cgtttttgag acgattgata ctctataa FT EDITED CDNA CD 1 atgtcaccac aaacggagac taaagcaggt gttggattta aagctggtgt CD 51 taaagattat agattaaccT attatacccc tgattacgag accaaggata CD 101 ctgatatttt ggcagcgtTt Cgaatgactc ctCaaccagg ggtgccacct CD 151 gaagaagcag gagccgcagt agctgctgaa tcttcaactg gtacatggac CD 201 tactgtttgg accgatggac ttaccagcct tgaccgttac aaaggtcgat CD 251 gctacgacat tgaacctgtt gctggagagg aaaatcaata tattgcttat CD 301 gTtgcttatC ctttagattt gtttgaggag ggttctgtta ccaacatgtt CD 351 cacttccatt gtaggtaatg tttttggatt taaagcttta cgagcttTac CD 401 gtctagaaga ttTacgaatt ccacctgctt attccaaaac ctttcaaggt CD 451 ccacctcatg gtattcaagt tgaaagagat aaatTgaata aatatggtcg CD 501 tcctttatta ggatgtacca ttaaaccaaa gttaggttta tctgccaaaa CD 551 actatggtag agctgtatat gaatgtcttc gtggtggact tgatttcacc CD 601 aaagatgacg aaaatgttaa ttctcaacct tttatgcgtt ggagagatcg CD 651 ttttctattc gtagcagaag ctatttTtaa atctcaagct gaaacagggg CD 701 agattaaagg gcattactta aatgccactg caggtacatg tgaggaaatg CD 751 atgaaaaggg cacattttgc tagagaatta ggaatgccta tcgtaatgca CD 801 tgattatttg acaggaggtt ttaCtgcaaa tacgaccctg gctcgttatt CD 851 gtagagacaa tggtttactt cttcatattc atcgtgccat gcatgcagtt CD 901 aTTgacagac aaagaaatca tggtattcac tttcgtgtat Tagctaaagc CD 951 atTacgtatg tccgggggag atcatattca tTcaggtaca gtagtaggta CD 1001 aattagaggg agaaCgtgaa gtaactttag gttttgtgga tttacTtCgt CD 1051 gacgattata ttgaaaaaga tagaagtcgt gggatatatt ttactcaaga CD 1101 ctgggtctct atgcctggtg ttttgcCcgt ggcttcaggt ggtattcatg CD 1151 tttggcatat gtcagcttta actgagattt tcggagatga ttccgtacta CD 1201 cagtttggcg ggggaactct aggacaccct tggggaaatg cacctggtgc CD 1251 agtagctaat cgagttgctt tagaagcttg tgtgcaagct cgtaatgaag CD 1301 gacgtgatct tgctcgcgag ggtaatgata ttatccgtga agctagtaaa CD 1351 tggagtcctg aattagcagc tgcttgtgaa gtatggaaag aaattaaatt CD 1401 cgtttttgag acgattgata ctctataa SQ SEQUENCE 476 AA; MSPQTETKAG VGFKAGVKDY RLTYYTPDYE TKDTDILAAF RMTPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYDIEPV AGEENQYIAY VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL RALRLEDLRI PPAYSKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT KDDENVNSQP FMRWRDRFLF VAEAIFKSQA ETGEIKGHYL NATAGTCEEM MKRAHFAREL GMPIVMHDYL TGGFTANTTL ARYCRDNGLL LHIHRAMHAV IDRQRNHGIH FRVLAKALRM SGGDHIHSGT VVGKLEGERE VTLGFVDLLR DDYIEKDRSR GIYFTQDWVS MPGVLPVASG GIHVWHMSAL TEIFGDDSVL QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLARE GNDIIREASK WSPELAAACE VWKEIKFVFE TIDTL* // ID AB086179_37 STANDARD; PRT; 314 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : accD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55358.1 FT PROTEIN_NAME : acetyl-CoA carboxylase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 74972 - 75913 FT DIRECTIONS : positive FT EDITING : 50 *(Tga) -> R(Cga) FT EDITING : 59 H(Cac) -> Y(Tac) FT EDITING : 78 *(Taa) -> Q(Caa) FT EDITING : 87 F(tTt) -> S(tCt) FT EDITING : 104 *(Tga) -> R(Cga) FT EDITING : 132 T(aCt) -> I(aTt) FT EDITING : 139 P(cCa) -> L(cTa) FT EDITING : 146 P(cCt) -> L(cTt) FT EDITING : 149 T(aCg) -> M(aTg) FT EDITING : 160 F(tTt) -> S(tCt) FT EDITING : 170 T(aCt) -> I(aTt) FT EDITING : 177 L(tTa) -> S(tCa) FT EDITING : 185 F(tTc) -> S(tCc) FT EDITING : 198 S(tCa) -> L(tTa) FT EDITING : 208 S(tCa) -> L(tTa) FT EDITING : 223 P(cCt) -> L(cTt) FT EDITING : 226 S(Tcc) -> P(Ccc) FT EDITING : 228 I(aTa) -> T(aCa) FT EDITING : 243 T(aCt) -> I(aTt) FT EDITING : 246 F(TTt) -> P(CCt) FT EDITING : 252 S(tCt) -> F(tTt) FT EDITING : 260 *(Tag) -> Q(Cag) FT EDITING : 264 *(Taa) -> Q(Caa) FT EDITING : 277 S(tCt) -> F(tTt) FT EDITING : 285 T(aCt) -> I(aTt) FT EDITING : 295 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 942 NT; CD 1 atgtctctaa tgaattggtt tgaagacaga cgcaaattta gtggattaat CD 51 cggggctttc atcgaaaaag caactaaagg gtatatcctc agtgaaagaa CD 101 ggaaagacag acatatcaaa attgatacta ctaaaggatt atggactTga CD 151 tgcgataact gtgaaaatat gcttCacatc agatttttaa gacaaaataa CD 201 acgcatttgc gaagaatgtg gatatcattt gTaaatgagt agtacggaaa CD 251 gaattgaatT tctaattgac cgtggtacct ggcatcctat ggatgaagat CD 301 atggttgctT gagacgcttt gaaattttcc gatgaagatt cctacaaaaa CD 351 tcgggtcctt ttttatcaaa aaagaacagg tttaactgat gctaCtcaaa CD 401 ctgggatagg taaacCaaat ggtattccta ttgcacCtgg tgttaCggat CD 451 ttccaattta tgggaggtag tatgggttTt gtagtaggag aaaagattac CD 501 tcgtcttaCt gaatatggta ctagagaatT aatgccagta ataatagttt CD 551 gttTctctgg aggagcacgt atgcaggaag gaactttgag ttCaatgcaa CD 601 atggctaaaa tttctgccgt ttCacagatt catcaagcac aaaaaaaatt CD 651 attatatata gctattcCta catatTccac aaTaggtggg gttactgcta CD 701 gttttggtat gttgggagac gtgattaCtg ctgaaTTtaa agcatatata CD 751 gcttCtgcag gtaaaagggt gattgaaTag acgttacgtT aaaaaatacc CD 801 tgacggttct caagttgctg agtctttatC tgatcatggt ttacttgatt CD 851 tgaCtgttcc acgcaacctt ttaagaggcg tctCaagtga aatattcgaa CD 901 ctttatagtt cagctccttg tagaaggagt aacaactcgt aa FT EDITED CDNA CD 1 atgtctctaa tgaattggtt tgaagacaga cgcaaattta gtggattaat CD 51 cggggctttc atcgaaaaag caactaaagg gtatatcctc agtgaaagaa CD 101 ggaaagacag acatatcaaa attgatacta ctaaaggatt atggactCga CD 151 tgcgataact gtgaaaatat gcttTacatc agatttttaa gacaaaataa CD 201 acgcatttgc gaagaatgtg gatatcattt gCaaatgagt agtacggaaa CD 251 gaattgaatC tctaattgac cgtggtacct ggcatcctat ggatgaagat CD 301 atggttgctC gagacgcttt gaaattttcc gatgaagatt cctacaaaaa CD 351 tcgggtcctt ttttatcaaa aaagaacagg tttaactgat gctaTtcaaa CD 401 ctgggatagg taaacTaaat ggtattccta ttgcacTtgg tgttaTggat CD 451 ttccaattta tgggaggtag tatgggttCt gtagtaggag aaaagattac CD 501 tcgtcttaTt gaatatggta ctagagaatC aatgccagta ataatagttt CD 551 gttCctctgg aggagcacgt atgcaggaag gaactttgag ttTaatgcaa CD 601 atggctaaaa tttctgccgt ttTacagatt catcaagcac aaaaaaaatt CD 651 attatatata gctattcTta catatCccac aaCaggtggg gttactgcta CD 701 gttttggtat gttgggagac gtgattaTtg ctgaaCCtaa agcatatata CD 751 gcttTtgcag gtaaaagggt gattgaaCag acgttacgtC aaaaaatacc CD 801 tgacggttct caagttgctg agtctttatT tgatcatggt ttacttgatt CD 851 tgaTtgttcc acgcaacctt ttaagaggcg tctTaagtga aatattcgaa CD 901 ctttatagtt cagctccttg tagaaggagt aacaactcgt aa SQ SEQUENCE 314 AA; MSLMNWFEDR RKFSGLIGAF IEKATKGYIL SERRKDRHIK IDTTKGLWTR CDNCENMLYI RFLRQNKRIC EECGYHLQMS STERIESLID RGTWHPMDED MVARDALKFS DEDSYKNRVL FYQKRTGLTD AIQTGIGKLN GIPIALGVMD FQFMGGSMGS VVGEKITRLI EYGTRESMPV IIVCSSGGAR MQEGTLSLMQ MAKISAVLQI HQAQKKLLYI AILTYPTTGG VTASFGMLGD VIIAEPKAYI AFAGKRVIEQ TLRQKIPDGS QVAESLFDHG LLDLIVPRNL LRGVLSEIFE LYSSAPCRRS NNS* // ID AB086179_39 STANDARD; PRT; 185 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ycf4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55360.1 FT PROTEIN_NAME : Ycf4 protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 76893 - 77447 FT DIRECTIONS : positive FT EDITING : 17 *(Tga) -> R(Cga) FT EDITING : 33 P(cCa) -> L(cTa) FT EDITING : 36 P(cCC) -> L(cTT) FT EDITING : 37 P(Cct) -> S(Tct) FT EDITING : 56 *(Taa) -> Q(Caa) FT EDITING : 62 *(Taa) -> Q(Caa) FT EDITING : 110 L(cTc) -> P(cCc) FT EDITING : 120 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 555 NT; CD 1 atgaattggg aatctgaatg gtttcgaata gaacttataa ggggatctTg CD 51 aagaattagt aatttttttt gggcgttcat tcttttgtca ggggcacCag CD 101 gatttcCCCc tgttggactt tccagttact tcggtaaaga tttaatatct CD 151 ttcctatcgt atgagTaaat cgtttttatt ccaTaaggaa ttgtaatgtg CD 201 cttttatggg attgctggtt ctgcctttag cctttacttg tggggcacca CD 251 tcttctggaa tataggtagt ggctataata aatttgataa aggaaaggga CD 301 attgtttgta tttatcgttg gggatttcTc ggtaaaaatc gtcgcattcg CD 351 tatcgaatCc tctatgaaag atatcgaagc tataggaatg gaagttcagg CD 401 aaggttttta tcctcgtcgc actctccgtc tgaaaatcaa aggtcaacaa CD 451 gatgttcctc taacttatat tggtgaaaac ttaactttga gagaaataga CD 501 agaagaagct gccgaattag ctcgtttttt gcaaatatct attgaaggat CD 551 tttga FT EDITED CDNA CD 1 atgaattggg aatctgaatg gtttcgaata gaacttataa ggggatctCg CD 51 aagaattagt aatttttttt gggcgttcat tcttttgtca ggggcacTag CD 101 gatttcTTTc tgttggactt tccagttact tcggtaaaga tttaatatct CD 151 ttcctatcgt atgagCaaat cgtttttatt ccaCaaggaa ttgtaatgtg CD 201 cttttatggg attgctggtt ctgcctttag cctttacttg tggggcacca CD 251 tcttctggaa tataggtagt ggctataata aatttgataa aggaaaggga CD 301 attgtttgta tttatcgttg gggatttcCc ggtaaaaatc gtcgcattcg CD 351 tatcgaatTc tctatgaaag atatcgaagc tataggaatg gaagttcagg CD 401 aaggttttta tcctcgtcgc actctccgtc tgaaaatcaa aggtcaacaa CD 451 gatgttcctc taacttatat tggtgaaaac ttaactttga gagaaataga CD 501 agaagaagct gccgaattag ctcgtttttt gcaaatatct attgaaggat CD 551 tttga SQ SEQUENCE 185 AA; MNWESEWFRI ELIRGSRRIS NFFWAFILLS GALGFLSVGL SSYFGKDLIS FLSYEQIVFI PQGIVMCFYG IAGSAFSLYL WGTIFWNIGS GYNKFDKGKG IVCIYRWGFP GKNRRIRIEF SMKDIEAIGM EVQEGFYPRR TLRLKIKGQQ DVPLTYIGEN LTLREIEEEA AELARFLQIS IEGF* // ID AB086179_40 STANDARD; PRT; 509 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ycf10 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55361.1 FT PROTEIN_NAME : Ycf10 protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 77577 - 79103 FT DIRECTIONS : positive FT EDITING : 9 L(Ctt) -> F(Ttt) FT EDITING : 91 F(tTt) -> S(tCt) FT EDITING : 121 P(Cca) -> S(Tca) FT EDITING : 251 L(cTa) -> P(cCa) FT EDITING : 252 C(Tgt) -> R(Cgt) FT EDITING : 268 *(Tag) -> Q(Cag) FT EDITING : 299 R(Cgg) -> W(Tgg) FT EDITING : 324 *(Taa) -> Q(Caa) FT EDITING : 434 S(TCt) -> L(CTt) FT EDITING : 445 L(CTg) -> S(TCg) FT EDITING : 457 S(tCa) -> L(tTa) FT EDITING : 480 S(tCa) -> L(tTa) FT EDITING : 489 S(tCt) -> F(tTt) FT EDITING : 492 S(tCg) -> L(tTg) FT EDITING : 498 L(CTa) -> S(TCa) FT CODON_START : 1 CL CDNALEN 1527 NT; CD 1 atgaaattat atcagtggca aattCttcga tggttttttg agactctaaa CD 51 ttgttcttta ggaagagctt ataaggctag caaaagaata cagtatataa CD 101 agaaagatta ttcattctat aaaaatacca tcttattttc aaaaggttct CD 151 tggcaagcta taaatcttta tacgaataca gaattgagaa acactttatt CD 201 tataatctac tggagtcttt tagaatatag aattagcctg tgtttcttaa CD 251 atttactaag gaaaattgaa tTtattcaat ttaaaaaatt atccgttatt CD 301 tcttttattc ttaatttaca ttcatctctt tctcatgtta acaaacagct CD 351 tcaaattcta Ccaaaagttc tttttgatag attttatttt tatctttgga CD 401 aaaacatgta tttttccctt cttctccaca attccctttc aagattcgta CD 451 aaggagagta tagaagaatc agagcagagt ggattcaaca acgaaaacaa CD 501 aaaagatttt caagatgaaa cttattttgt tttaaatgaa tcccttgaga CD 551 aagattttag tagaataaga gagatgaata gaaaattggc ttggattgaa CD 601 gtaactttaa atgatttaaa tacttggaag agttactacc tcttcttccc CD 651 atttttatca gagatgaaga atactcctca aaatgaatct tcttttaagt CD 701 tgaagaattt tgaaataacg actccagctt atgattctac aggttttata CD 751 cTaTgttcca taagtcgtac tttatctaga tttcaaatag aattgatggg CD 801 tTagtcaagt tcattggtac ttcaggaatt tcgatcagct aaatatcaag CD 851 cattggcatc tatacaatat ataggatgtt taatttttct tcctCggata CD 901 atttcccgct ctctcaagga atggtttttg gaaccctgga ttaaattttg CD 951 gtgggatact tatcaatctT aaatttctct taattctttc caagaagaaa CD 1001 gagcatcaga agggcttcaa gaagtcgaag aaccactttg gttggataaa CD 1051 ttggtgtcaa attttctgaa aaatcaatcc caagacctta atatagaaat CD 1101 ttatggagaa acaattcaat taataagaat gtacaatgaa aatagtattc CD 1151 aaaccatttt acatttatta acaggtatga tttgcttcac tactttaggt CD 1201 gccttgttta tcttaggtaa gaaaaggctt tctgttttga attcctggat CD 1251 tcaagaatca ttttatagct taagtgatac tatgaaagcc tttgctattT CD 1301 Ctttattaac cgatctatgt attgggtttc atCTgcctca tggctgggaa CD 1351 gtagtaatag gttcttcttC agaacactta ggatttgctc ataataaaca CD 1401 tataatatcc tgtttcgtgt caacttttcc ggttatttCa gatacagttt CD 1451 ctaaatattg gatttCtcgt cattCgaatc gtatatctcc tCTaattgta CD 1501 gcgacttatc atacaatgaa tgaataa FT EDITED CDNA CD 1 atgaaattat atcagtggca aattTttcga tggttttttg agactctaaa CD 51 ttgttcttta ggaagagctt ataaggctag caaaagaata cagtatataa CD 101 agaaagatta ttcattctat aaaaatacca tcttattttc aaaaggttct CD 151 tggcaagcta taaatcttta tacgaataca gaattgagaa acactttatt CD 201 tataatctac tggagtcttt tagaatatag aattagcctg tgtttcttaa CD 251 atttactaag gaaaattgaa tCtattcaat ttaaaaaatt atccgttatt CD 301 tcttttattc ttaatttaca ttcatctctt tctcatgtta acaaacagct CD 351 tcaaattcta Tcaaaagttc tttttgatag attttatttt tatctttgga CD 401 aaaacatgta tttttccctt cttctccaca attccctttc aagattcgta CD 451 aaggagagta tagaagaatc agagcagagt ggattcaaca acgaaaacaa CD 501 aaaagatttt caagatgaaa cttattttgt tttaaatgaa tcccttgaga CD 551 aagattttag tagaataaga gagatgaata gaaaattggc ttggattgaa CD 601 gtaactttaa atgatttaaa tacttggaag agttactacc tcttcttccc CD 651 atttttatca gagatgaaga atactcctca aaatgaatct tcttttaagt CD 701 tgaagaattt tgaaataacg actccagctt atgattctac aggttttata CD 751 cCaCgttcca taagtcgtac tttatctaga tttcaaatag aattgatggg CD 801 tCagtcaagt tcattggtac ttcaggaatt tcgatcagct aaatatcaag CD 851 cattggcatc tatacaatat ataggatgtt taatttttct tcctTggata CD 901 atttcccgct ctctcaagga atggtttttg gaaccctgga ttaaattttg CD 951 gtgggatact tatcaatctC aaatttctct taattctttc caagaagaaa CD 1001 gagcatcaga agggcttcaa gaagtcgaag aaccactttg gttggataaa CD 1051 ttggtgtcaa attttctgaa aaatcaatcc caagacctta atatagaaat CD 1101 ttatggagaa acaattcaat taataagaat gtacaatgaa aatagtattc CD 1151 aaaccatttt acatttatta acaggtatga tttgcttcac tactttaggt CD 1201 gccttgttta tcttaggtaa gaaaaggctt tctgttttga attcctggat CD 1251 tcaagaatca ttttatagct taagtgatac tatgaaagcc tttgctattC CD 1301 Ttttattaac cgatctatgt attgggtttc atTCgcctca tggctgggaa CD 1351 gtagtaatag gttcttcttT agaacactta ggatttgctc ataataaaca CD 1401 tataatatcc tgtttcgtgt caacttttcc ggttatttTa gatacagttt CD 1451 ctaaatattg gatttTtcgt cattTgaatc gtatatctcc tTCaattgta CD 1501 gcgacttatc atacaatgaa tgaataa SQ SEQUENCE 509 AA; MKLYQWQIFR WFFETLNCSL GRAYKASKRI QYIKKDYSFY KNTILFSKGS WQAINLYTNT ELRNTLFIIY WSLLEYRISL CFLNLLRKIE SIQFKKLSVI SFILNLHSSL SHVNKQLQIL SKVLFDRFYF YLWKNMYFSL LLHNSLSRFV KESIEESEQS GFNNENKKDF QDETYFVLNE SLEKDFSRIR EMNRKLAWIE VTLNDLNTWK SYYLFFPFLS EMKNTPQNES SFKLKNFEIT TPAYDSTGFI PRSISRTLSR FQIELMGQSS SLVLQEFRSA KYQALASIQY IGCLIFLPWI ISRSLKEWFL EPWIKFWWDT YQSQISLNSF QEERASEGLQ EVEEPLWLDK LVSNFLKNQS QDLNIEIYGE TIQLIRMYNE NSIQTILHLL TGMICFTTLG ALFILGKKRL SVLNSWIQES FYSLSDTMKA FAILLLTDLC IGFHSPHGWE VVIGSSLEHL GFAHNKHIIS CFVSTFPVIL DTVSKYWIFR HLNRISPSIV ATYHTMNE* // ID AB086179_41 STANDARD; PRT; 323 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : petA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55362.1 FT PROTEIN_NAME : cytochrome f FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 79362 - 80330 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 19 L(tTa) -> S(tCa) FT EDITING : 53 I(aTt) -> T(aCt) FT EDITING : 74 *(Tag) -> Q(Cag) FT EDITING : 96 *(Taa) -> Q(Caa) FT EDITING : 195 *(Tag) -> Q(Cag) FT EDITING : 246 S(Tca) -> P(Cca) FT EDITING : 275 *(Taa) -> Q(Caa) FT EDITING : 282 P(cCt) -> L(cTt) FT EDITING : 292 S(tCg) -> L(tTg) FT EDITING : 295 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 969 NT; CD 1 aCgcaaaaca gaaaaactta tgcttatgat tggataaaga aatggatgat CD 51 taaatTaatt tcaacgctga taattataaa tacaatggtt tggtcttctg CD 101 tctcagaagc ataccccatc tttgcacagc aaggttatga aaatcctcga CD 151 gaagcaaTtg gacgtattgt atgtgctaat tgtcatttag cgaaaaaacc CD 201 agtggatatt gaagttccaT agtctgtact tccggatact gtatttgagg CD 251 cagtcgttaa aattccttac gatacccaag taaaaTaagt acttgctaat CD 301 ggtaagaaag gagctttaaa tgtaggagct gttcttattt taccggaagg CD 351 attcgaatta gccccttcta atcgggttcc ccccgaaatg aaagaaaaaa CD 401 taggtaatct ttatttccaa agttatcgtc ctgataagaa gaatattctt CD 451 gtagtaggtc cggttcctgg taagaaatac agtgaaatca tatttcccat CD 501 tcttgcaccg aatcctgcaa ctaataaaga tgctcatttt ttaaaatatc CD 551 ctatatatgt gggtggtaat agaggaaggg gaTagattta tcctgatgga CD 601 agtaaaagca acaatacagt ttataatgct tcaacgacag gtataattaa CD 651 aaaagtttta cgtaaagaaa aaggtggata tgaaataatt attgataata CD 701 cattagatgg tcgtcaagtt attgatatcg tacctTcagg accagaactc CD 751 attatttcag agggggaatc cataaaggtg gatcaacctt taacaaataa CD 801 tcctaatgtt ggtggatttg gtTaaggaga tgcagaaata gtacCtcaag CD 851 atgtattacg tgttcaaggt ctttCgttat tctCcgcatc agttatctta CD 901 gcacagatat ttctagtatt gaaaaagaaa caatttgaaa aagttcaatt CD 951 agctgaaatg aatttttaa FT EDITED CDNA CD 1 aTgcaaaaca gaaaaactta tgcttatgat tggataaaga aatggatgat CD 51 taaatCaatt tcaacgctga taattataaa tacaatggtt tggtcttctg CD 101 tctcagaagc ataccccatc tttgcacagc aaggttatga aaatcctcga CD 151 gaagcaaCtg gacgtattgt atgtgctaat tgtcatttag cgaaaaaacc CD 201 agtggatatt gaagttccaC agtctgtact tccggatact gtatttgagg CD 251 cagtcgttaa aattccttac gatacccaag taaaaCaagt acttgctaat CD 301 ggtaagaaag gagctttaaa tgtaggagct gttcttattt taccggaagg CD 351 attcgaatta gccccttcta atcgggttcc ccccgaaatg aaagaaaaaa CD 401 taggtaatct ttatttccaa agttatcgtc ctgataagaa gaatattctt CD 451 gtagtaggtc cggttcctgg taagaaatac agtgaaatca tatttcccat CD 501 tcttgcaccg aatcctgcaa ctaataaaga tgctcatttt ttaaaatatc CD 551 ctatatatgt gggtggtaat agaggaaggg gaCagattta tcctgatgga CD 601 agtaaaagca acaatacagt ttataatgct tcaacgacag gtataattaa CD 651 aaaagtttta cgtaaagaaa aaggtggata tgaaataatt attgataata CD 701 cattagatgg tcgtcaagtt attgatatcg tacctCcagg accagaactc CD 751 attatttcag agggggaatc cataaaggtg gatcaacctt taacaaataa CD 801 tcctaatgtt ggtggatttg gtCaaggaga tgcagaaata gtacTtcaag CD 851 atgtattacg tgttcaaggt ctttTgttat tctTcgcatc agttatctta CD 901 gcacagatat ttctagtatt gaaaaagaaa caatttgaaa aagttcaatt CD 951 agctgaaatg aatttttaa SQ SEQUENCE 323 AA; MQNRKTYAYD WIKKWMIKSI STLIIINTMV WSSVSEAYPI FAQQGYENPR EATGRIVCAN CHLAKKPVDI EVPQSVLPDT VFEAVVKIPY DTQVKQVLAN GKKGALNVGA VLILPEGFEL APSNRVPPEM KEKIGNLYFQ SYRPDKKNIL VVGPVPGKKY SEIIFPILAP NPATNKDAHF LKYPIYVGGN RGRGQIYPDG SKSNNTVYNA STTGIIKKVL RKEKGGYEII IDNTLDGRQV IDIVPPGPEL IISEGESIKV DQPLTNNPNV GGFGQGDAEI VLQDVLRVQG LLLFFASVIL AQIFLVLKKK QFEKVQLAEM NF* // ID AB086179_42 STANDARD; PRT; 41 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbJ FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55363.1 FT PROTEIN_NAME : photosystem II J-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 81738 - 81860 FT DIRECTIONS : negative FT EDITING : 29 L(Ctc) -> F(Ttc) FT EDITING : 30 H(Cat) -> Y(Tat) FT EDITING : 33 H(Cat) -> Y(Tat) FT CODON_START : 1 CL CDNALEN 123 NT; CD 1 atggctaata ccactggacg gattcctctg tggctaatag gtactatagc CD 51 aggtattctt gtaatcggtt tagtaggtat ctttCtcCat ggctcaCatt CD 101 ctggattagg gtcatcttta taa FT EDITED CDNA CD 1 atggctaata ccactggacg gattcctctg tggctaatag gtactatagc CD 51 aggtattctt gtaatcggtt tagtaggtat ctttTtcTat ggctcaTatt CD 101 ctggattagg gtcatcttta taa SQ SEQUENCE 41 AA; MANTTGRIPL WLIGTIAGIL VIGLVGIFFY GSYSGLGSSL * // ID AB086179_44 STANDARD; PRT; 40 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbF FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55365.1 FT PROTEIN_NAME : photosystem II cytochrome b559 4 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 82118 - 82237 FT DIRECTIONS : negative FT EDITING : 23 L(cTc) -> P(cCc) FT EDITING : 26 S(tCt) -> F(tTt) FT EDITING : 27 P(CCt) -> F(TTt) FT EDITING : 28 S(tCa) -> L(tTa) FT EDITING : 33 V(gTa) -> A(gCa) FT CODON_START : 1 CL CDNALEN 120 NT; CD 1 atgactatag atagaactta tcccattttt acagttaggt ggctggctgt CD 51 tcatggacta gctgtacTca cagtttCtCC ttCaggatca atatcagTaa CD 101 tgcagtttat ccaacgataa FT EDITED CDNA CD 1 atgactatag atagaactta tcccattttt acagttaggt ggctggctgt CD 51 tcatggacta gctgtacCca cagtttTtTT ttTaggatca atatcagCaa CD 101 tgcagtttat ccaacgataa SQ SEQUENCE 40 AA; MTIDRTYPIF TVRWLAVHGL AVPTVFFLGS ISAMQFIQR* // ID AB086179_45 STANDARD; PRT; 84 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbE FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55366.1 FT PROTEIN_NAME : photosystem II cytochrome b559 8 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 82247 - 82498 FT DIRECTIONS : negative FT EDITING : 47 S(tCt) -> F(tTt) FT EDITING : 60 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 252 NT; CD 1 atgtctggga atacagggga acgccctttc gctgacatta ttaccagtat CD 51 tcgatactgg gtaatccata gcatcacaat accttccttg tttattgcag CD 101 gttggttatt cgttagcact ggtttggctt atgatgtttC tggaagcccc CD 151 aggccgaatg agtatttcac tgagaatTga caagaggttc cactaattac CD 201 tggccgtttc aattcgttag aacaagttga tgaattcact agatcttttt CD 251 ag FT EDITED CDNA CD 1 atgtctggga atacagggga acgccctttc gctgacatta ttaccagtat CD 51 tcgatactgg gtaatccata gcatcacaat accttccttg tttattgcag CD 101 gttggttatt cgttagcact ggtttggctt atgatgtttT tggaagcccc CD 151 aggccgaatg agtatttcac tgagaatCga caagaggttc cactaattac CD 201 tggccgtttc aattcgttag aacaagttga tgaattcact agatcttttt CD 251 ag SQ SEQUENCE 84 AA; MSGNTGERPF ADIITSIRYW VIHSITIPSL FIAGWLFVST GLAYDVFGSP RPNEYFTENR QEVPLITGRF NSLEQVDEFT RSF* // ID AB086179_46 STANDARD; PRT; 32 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : petL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55367.1 FT PROTEIN_NAME : cytochrome b/f complex 3.5 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 84502 - 84597 FT DIRECTIONS : positive FT EDITING : 20 A(gCt) -> V(gTt) FT EDITING : 23 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 96 NT; CD 1 atgcttactc tatttagcta ctttggattt ctattcgccg ctttaacttt CD 51 agctttagCt ttattcaCtg gtttgaataa gatacaactc atttag FT EDITED CDNA CD 1 atgcttactc tatttagcta ctttggattt ctattcgccg ctttaacttt CD 51 agctttagTt ttattcaTtg gtttgaataa gatacaactc atttag SQ SEQUENCE 32 AA; MLTLFSYFGF LFAALTLALV LFIGLNKIQL I* // ID AB086179_47 STANDARD; PRT; 38 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : petG FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55368.1 FT PROTEIN_NAME : cytochrome b/f complex subunit V FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 84729 - 84842 FT DIRECTIONS : positive FT EDITING : 22 S(tCc) -> F(tTc) FT EDITING : 25 V(gTg) -> A(gCg) FT EDITING : 28 *(Taa) -> Q(Caa) FT EDITING : 31 C(Tgt) -> R(Cgt) FT EDITING : 38 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 114 NT; CD 1 atggttgaag ctttgctgtc tggaatagta ttaggtttga tcccaataac CD 51 tttggctgga ttatCcgtaa ctgTgtatct aTaatatcgg Tgtggtgatc CD 101 aattagattt gCaa FT EDITED CDNA CD 1 atggttgaag ctttgctgtc tggaatagta ttaggtttga tcccaataac CD 51 tttggctgga ttatTcgtaa ctgCgtatct aCaatatcgg Cgtggtgatc CD 101 aattagattt gTaa SQ SEQUENCE 38 AA; MVEALLSGIV LGLIPITLAG LFVTAYLQYR RGDQLDL* // ID AB086179_49 STANDARD; PRT; 66 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl33 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55370.1 FT PROTEIN_NAME : ribosomal protein L33 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 86330 - 86527 FT DIRECTIONS : positive FT EDITING : 44 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 198 NT; CD 1 atggctaaga gtaaagatat aagaatagca attactttag aatgtactag CD 51 ttgctccgaa aatgacgaaa aaagattctc aggtgtttct agatatgtaa CD 101 gtgaaaagaa tcgtcgtaat acacctactT gattagaatt aaagaagttt CD 151 tgtccctatt gctataagca caagattcac agagaaataa aaaaataa FT EDITED CDNA CD 1 atggctaaga gtaaagatat aagaatagca attactttag aatgtactag CD 51 ttgctccgaa aatgacgaaa aaagattctc aggtgtttct agatatgtaa CD 101 gtgaaaagaa tcgtcgtaat acacctactC gattagaatt aaagaagttt CD 151 tgtccctatt gctataagca caagattcac agagaaataa aaaaataa SQ SEQUENCE 66 AA; MAKSKDIRIA ITLECTSCSE NDEKRFSGVS RYVSEKNRRN TPTRLELKKF CPYCYKHKIH REIKK* // ID AB086179_50 STANDARD; PRT; 76 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps18 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55371.1 FT PROTEIN_NAME : ribosomal protein S18 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 86559 - 86786 FT DIRECTIONS : positive FT EDITING : 30 *(Tga) -> R(Cga) FT EDITING : 63 C(Tgc) -> R(Cgc) FT CODON_START : 1 CL CDNALEN 228 NT; CD 1 atgaacaaat ttaaacgatc ttctcgtaga cggttgccac ctattagatc CD 51 tggagaaatt attgattata agaatacaag tttactcTga agattcatta CD 101 gtgaacaagg aaaaatttta tctagacgaa tgaataaatt gacttcgaaa CD 151 caacaacgtt tagtaactgt tgctattaaa agggctTgca ttttagcgtt CD 201 gttacctttc ctcaataatg aaagttga FT EDITED CDNA CD 1 atgaacaaat ttaaacgatc ttctcgtaga cggttgccac ctattagatc CD 51 tggagaaatt attgattata agaatacaag tttactcCga agattcatta CD 101 gtgaacaagg aaaaatttta tctagacgaa tgaataaatt gacttcgaaa CD 151 caacaacgtt tagtaactgt tgctattaaa agggctCgca ttttagcgtt CD 201 gttacctttc ctcaataatg aaagttga SQ SEQUENCE 76 AA; MNKFKRSSRR RLPPIRSGEI IDYKNTSLLR RFISEQGKIL SRRMNKLTSK QQRLVTVAIK RARILALLPF LNNES* // ID AB086179_51 STANDARD; PRT; 113 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl20 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55372.1 FT PROTEIN_NAME : ribosomal protein L20 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 87066 - 87404 FT DIRECTIONS : negative FT EDITING : 29 P(Cca) -> S(Tca) FT EDITING : 97 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 339 NT; CD 1 atgactagag tgaaacgtgg ttatgtagct cggagacgtc gtaaaaatat CD 51 tcttaaactt acatcgggat ttcaaggagc tcatCcaaca ctttttcgaa CD 101 ctgccaatca gcaaggaatg aaatctttaa cttcctctca tcgggataga CD 151 ggtaaacgaa aaagagattt ccgtcgtcta tggattacta gaataaatgc CD 201 agcagcccga aggagtaaaa aatcttatca tacattaatt caggaattgt CD 251 ataagagaaa aatactttta aatagaaaaa tgcttgctTa aatagctata CD 301 ttagatacat attgtttctc cactttattg ggggattaa FT EDITED CDNA CD 1 atgactagag tgaaacgtgg ttatgtagct cggagacgtc gtaaaaatat CD 51 tcttaaactt acatcgggat ttcaaggagc tcatTcaaca ctttttcgaa CD 101 ctgccaatca gcaaggaatg aaatctttaa cttcctctca tcgggataga CD 151 ggtaaacgaa aaagagattt ccgtcgtcta tggattacta gaataaatgc CD 201 agcagcccga aggagtaaaa aatcttatca tacattaatt caggaattgt CD 251 ataagagaaa aatactttta aatagaaaaa tgcttgctCa aatagctata CD 301 ttagatacat attgtttctc cactttattg ggggattaa SQ SEQUENCE 113 AA; MTRVKRGYVA RRRRKNILKL TSGFQGAHST LFRTANQQGM KSLTSSHRDR GKRKRDFRRL WITRINAAAR RSKKSYHTLI QELYKRKILL NRKMLAQIAI LDTYCFSTLL GD* // ID AB086179_52 STANDARD; PRT; 205 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : clpP FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55373.1 FT PROTEIN_NAME : ATP-dependent protease proteolytic subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 24/2 FT INTRON 122/0 FT EDITING : 20 R(Cgg) -> W(Tgg) FT EDITING : 34 L(Ctt) -> F(Ttt) FT EDITING : 37 *(Taa) -> Q(Caa) FT EDITING : 65 L(Cta) -> L(Tta) FT EDITING : 69 F(tTt) -> S(tCt) FT EDITING : 93 M(aTg) -> T(aCg) FT EDITING : 105 P(CCC) -> F(TTT) FT EDITING : 106 T(aCt) -> I(aTt) FT EDITING : 148 S(tCg) -> L(tTg) FT EDITING : 173 T(aCg) -> M(aTg) FT EDITING : 189 T(aCt) -> I(aTt) FT EDITING : 190 A(gCt) -> V(gTt) FT CODON_START : 1 CL CDNALEN 615 NT; CD 1 atgccgattg gtgtgccgaa agtccctttt cgtctccctg gagaagaaga CD 51 tgcagttCgg attgatgtat acaaccgact ttatagagaa cgattgcttC CD 101 ttctgggtTa acatgtagat gatgaaatag caaatcaatt aattggtatc CD 151 atgatgtact taaatgggga agatgaaagt aaggatatgt atCtatatat CD 201 aaattTtccc ggtggagctg tattagctgg aatatctgtt tatgatacaa CD 251 tgcaattcgt agtaccagat gtccataTga tttgcatggg attagctgct CD 301 tcaatgggat ctCCCaCttt aactggagga gagattacta aacgtatagc CD 351 cttaccccac gctaggatta tgattcatca acctgctagt tcttattatg CD 401 atggacaagc cggagagtgt atcatggaag ctgaagaagt ttCgaagctt CD 451 cgcgattgta taactaaagt ctatgtacaa agaacaggca agcctttatg CD 501 ggttatttct gaagataCgg aaagagatgt ttttatgtca gcgaaagaag CD 551 cacaaattta tggtaCtgCt gattttgtag ctatagaaac aacttctaat CD 601 tctttgacta actaa FT EDITED CDNA CD 1 atgccgattg gtgtgccgaa agtccctttt cgtctccctg gagaagaaga CD 51 tgcagttTgg attgatgtat acaaccgact ttatagagaa cgattgcttT CD 101 ttctgggtCa acatgtagat gatgaaatag caaatcaatt aattggtatc CD 151 atgatgtact taaatgggga agatgaaagt aaggatatgt atTtatatat CD 201 aaattCtccc ggtggagctg tattagctgg aatatctgtt tatgatacaa CD 251 tgcaattcgt agtaccagat gtccataCga tttgcatggg attagctgct CD 301 tcaatgggat ctTTTaTttt aactggagga gagattacta aacgtatagc CD 351 cttaccccac gctaggatta tgattcatca acctgctagt tcttattatg CD 401 atggacaagc cggagagtgt atcatggaag ctgaagaagt ttTgaagctt CD 451 cgcgattgta taactaaagt ctatgtacaa agaacaggca agcctttatg CD 501 ggttatttct gaagataTgg aaagagatgt ttttatgtca gcgaaagaag CD 551 cacaaattta tggtaTtgTt gattttgtag ctatagaaac aacttctaat CD 601 tctttgacta actaa SQ SEQUENCE 205 AA; MPIGVPKVPF RLPGEEDAVW IDVYNRLYRE RLLFLGQHVD DEIANQLIGI MMYLNGEDES KDMYLYINSP GGAVLAGISV YDTMQFVVPD VHTICMGLAA SMGSFILTGG EITKRIALPH ARIMIHQPAS SYYDGQAGEC IMEAEEVLKL RDCITKVYVQ RTGKPLWVIS EDMERDVFMS AKEAQIYGIV DFVAIETTSN SLTN* // ID AB086179_53 STANDARD; PRT; 509 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55374.1 FT PROTEIN_NAME : photosystem II 47 kDa protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 91107 - 92633 FT DIRECTIONS : positive FT EDITING : 5 R(Cgg) -> W(Tgg) FT EDITING : 13 P(cCa) -> L(cTa) FT EDITING : 16 L(cTt) -> P(cCt) FT EDITING : 18 C(Tgt) -> R(Cgt) FT EDITING : 21 V(gTa) -> A(gCa) FT EDITING : 54 L(TTa) -> P(CCa) FT EDITING : 64 L(cTt) -> P(cCt) FT EDITING : 100 Y(Tat) -> H(Cat) FT EDITING : 103 P(cCa) -> L(cTa) FT EDITING : 104 F(tTt) -> S(tCt) FT EDITING : 107 S(tCa) -> L(tTa) FT EDITING : 120 S(tCg) -> L(tTg) FT EDITING : 122 S(tCa) -> L(tTa) FT EDITING : 132 F(tTt) -> S(tCt) FT EDITING : 133 S(tCa) -> L(tTa) FT EDITING : 135 S(tCg) -> L(tTg) FT EDITING : 156 S(tCt) -> F(tTt) FT EDITING : 216 Y(Tat) -> H(Cat) FT EDITING : 222 F(TTt) -> P(CCt) FT EDITING : 264 S(Tca) -> P(Cca) FT EDITING : 267 S(tCa) -> L(tTa) FT EDITING : 268 S(tCt) -> F(tTt) FT EDITING : 277 *(Taa) -> Q(Caa) FT EDITING : 319 S(Tca) -> P(Cca) FT EDITING : 343 Y(Tac) -> H(Cac) FT EDITING : 363 S(tCt) -> F(tTt) FT EDITING : 370 P(cCa) -> L(cTa) FT EDITING : 382 S(Tca) -> P(Cca) FT EDITING : 383 S(tCt) -> F(tTt) FT EDITING : 423 C(Tgt) -> R(Cgt) FT EDITING : 425 *(Taa) -> Q(Caa) FT EDITING : 430 S(tCt) -> F(tTt) FT EDITING : 432 S(tCt) -> F(tTt) FT EDITING : 443 S(tCc) -> F(tTc) FT EDITING : 461 P(cCt) -> L(cTt) FT EDITING : 462 S(tCc) -> F(tTc) FT EDITING : 463 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 1527 NT; CD 1 atgggtttac ctCggtatcg tgttcatacg gtcgtacCaa atgatcTtgg CD 51 cTgtttaatt gTagtacatc taatgcatac tgctttagtt tctggttggg CD 101 ccggttctat ggctttgtat gaattagcag tttttgatcc ttctgatccc CD 151 gttcttgatT Taatgtggag acagggcatg tttgttatac Tttttatgac CD 201 tcgtctagga attacaaaat cttggggtgg ttggagtatt actggagaaa CD 251 ctgtgactaa tgcaggtatt tggagttacg agggtgttgc cgcggttTat CD 301 atcgtacCat TtggcttgtC attcttggca gctatttggc attgggtata CD 351 ttgggattCg gaatCatttc gtgacgaacg tacaggaaaa ccttTttCag CD 401 attCgcctaa aatttttgga attcatttat tcctttcagg agtactttgt CD 451 tttggatttg gagcatCtca tgtaacaggt ttattcggtc caggaatatg CD 501 ggtttccgat ccttatggac taacgggaaa ggtagaacca gtggctccag CD 551 cttggggagc agaaggtttc gatcccttcg ttcctggggg aatagcctct CD 601 catcatatcg cagcaggtat tttaggtata ttagcaggcc tattcTatct CD 651 tagtgttcgt cccTTtcaaa ggttatacaa aggattacgt atgggtaatg CD 701 ttgaaactgt tttatctagc agtatcgctg ctgtattttt tgcagctttc CD 751 gtagttgctg gaacaatgtg gtacgggtct gcagctactT caatagaatC CD 801 atCtggtcct actcgttacc aatgggacTa aggtttcttc caacaagaaa CD 851 tagatcgtag gattcgttct agcaaggctg agaatcttag tttatcagaa CD 901 gcttggtcta aaattcctga aaaattagcg ttttacgatt atattggtaa CD 951 caatTcagct aaagggggat tatttagagc aggtgcaatg gataatggag CD 1001 atggaatagc tgttggttgg ttaggtTacg ctgtctttaa agataaagaa CD 1051 gggcatgaac tcttcgtacg tcgtatgcct actttttCtg aaacgtttcc CD 1101 agtagttcCa gtagatgaag aaggaattgt tagagcagat atcTcatCta CD 1151 ggagagcaga atctaaatat agtgttgagc aagtaggtgt aattgttgaa CD 1201 ttttacggtg gtgaactcga tggtgttagt tttagcgatc ctgttacagt CD 1251 gaagaagtat gctagaTgtg ctTaattggg tgaaatttCt gaatCtgata CD 1301 gggctacttt aaagtctgat ggtgtctCcc gtagtagtcc aagaggttgg CD 1351 tttacttttg gtcacgctac atttgctctt cCttCctCct tcgggcatat CD 1401 ctggcacggt gccagaactc tgttcagaga tgtttttgcc ggtattgact CD 1451 cagatttaga tgctcaagtt gaatttggag cttttgaaaa attgggagat CD 1501 ccaactacta agagacaagt ggtgtga FT EDITED CDNA CD 1 atgggtttac ctTggtatcg tgttcatacg gtcgtacTaa atgatcCtgg CD 51 cCgtttaatt gCagtacatc taatgcatac tgctttagtt tctggttggg CD 101 ccggttctat ggctttgtat gaattagcag tttttgatcc ttctgatccc CD 151 gttcttgatC Caatgtggag acagggcatg tttgttatac Cttttatgac CD 201 tcgtctagga attacaaaat cttggggtgg ttggagtatt actggagaaa CD 251 ctgtgactaa tgcaggtatt tggagttacg agggtgttgc cgcggttCat CD 301 atcgtacTat CtggcttgtT attcttggca gctatttggc attgggtata CD 351 ttgggattTg gaatTatttc gtgacgaacg tacaggaaaa ccttCttTag CD 401 attTgcctaa aatttttgga attcatttat tcctttcagg agtactttgt CD 451 tttggatttg gagcatTtca tgtaacaggt ttattcggtc caggaatatg CD 501 ggtttccgat ccttatggac taacgggaaa ggtagaacca gtggctccag CD 551 cttggggagc agaaggtttc gatcccttcg ttcctggggg aatagcctct CD 601 catcatatcg cagcaggtat tttaggtata ttagcaggcc tattcCatct CD 651 tagtgttcgt cccCCtcaaa ggttatacaa aggattacgt atgggtaatg CD 701 ttgaaactgt tttatctagc agtatcgctg ctgtattttt tgcagctttc CD 751 gtagttgctg gaacaatgtg gtacgggtct gcagctactC caatagaatT CD 801 atTtggtcct actcgttacc aatgggacCa aggtttcttc caacaagaaa CD 851 tagatcgtag gattcgttct agcaaggctg agaatcttag tttatcagaa CD 901 gcttggtcta aaattcctga aaaattagcg ttttacgatt atattggtaa CD 951 caatCcagct aaagggggat tatttagagc aggtgcaatg gataatggag CD 1001 atggaatagc tgttggttgg ttaggtCacg ctgtctttaa agataaagaa CD 1051 gggcatgaac tcttcgtacg tcgtatgcct actttttTtg aaacgtttcc CD 1101 agtagttcTa gtagatgaag aaggaattgt tagagcagat atcCcatTta CD 1151 ggagagcaga atctaaatat agtgttgagc aagtaggtgt aattgttgaa CD 1201 ttttacggtg gtgaactcga tggtgttagt tttagcgatc ctgttacagt CD 1251 gaagaagtat gctagaCgtg ctCaattggg tgaaatttTt gaatTtgata CD 1301 gggctacttt aaagtctgat ggtgtctTcc gtagtagtcc aagaggttgg CD 1351 tttacttttg gtcacgctac atttgctctt cTttTctTct tcgggcatat CD 1401 ctggcacggt gccagaactc tgttcagaga tgtttttgcc ggtattgact CD 1451 cagatttaga tgctcaagtt gaatttggag cttttgaaaa attgggagat CD 1501 ccaactacta agagacaagt ggtgtga SQ SEQUENCE 509 AA; MGLPWYRVHT VVLNDPGRLI AVHLMHTALV SGWAGSMALY ELAVFDPSDP VLDPMWRQGM FVIPFMTRLG ITKSWGGWSI TGETVTNAGI WSYEGVAAVH IVLSGLLFLA AIWHWVYWDL ELFRDERTGK PSLDLPKIFG IHLFLSGVLC FGFGAFHVTG LFGPGIWVSD PYGLTGKVEP VAPAWGAEGF DPFVPGGIAS HHIAAGILGI LAGLFHLSVR PPQRLYKGLR MGNVETVLSS SIAAVFFAAF VVAGTMWYGS AATPIELFGP TRYQWDQGFF QQEIDRRIRS SKAENLSLSE AWSKIPEKLA FYDYIGNNPA KGGLFRAGAM DNGDGIAVGW LGHAVFKDKE GHELFVRRMP TFFETFPVVL VDEEGIVRAD IPFRRAESKY SVEQVGVIVE FYGGELDGVS FSDPVTVKKY ARRAQLGEIF EFDRATLKSD GVFRSSPRGW FTFGHATFAL LFFFGHIWHG ARTLFRDVFA GIDSDLDAQV EFGAFEKLGD PTTKRQVV* // ID AB086179_54 STANDARD; PRT; 41 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbT FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55375.1 FT PROTEIN_NAME : photosystem II T-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 92788 - 92910 FT DIRECTIONS : positive FT EDITING : 14 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 123 NT; CD 1 atggaagcat tggtttatac atttttgttg gtaggcactt Caggaataat CD 51 ctttttcgct attttttttc gagacccacc taaagttcca agtaagggag CD 101 ttccgagcaa gggaaagaaa taa FT EDITED CDNA CD 1 atggaagcat tggtttatac atttttgttg gtaggcactt Taggaataat CD 51 ctttttcgct attttttttc gagacccacc taaagttcca agtaagggag CD 101 ttccgagcaa gggaaagaaa taa SQ SEQUENCE 41 AA; MEALVYTFLL VGTLGIIFFA IFFRDPPKVP SKGVPSKGKK * // ID AB086179_57 STANDARD; PRT; 75 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psbH FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55378.1 FT PROTEIN_NAME : photosystem II 10 kDa phosphoprotein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 93225 - 93449 FT DIRECTIONS : positive FT EDITING : 23 S(tCa) -> L(tTa) FT EDITING : 53 S(tCt) -> F(tTt) FT EDITING : 54 S(tCa) -> L(tTa) FT EDITING : 60 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atggctacac aaattattga tgacactcct aagactaaag ggagacgaag CD 51 tggtatagga aatatatCaa aaccacttaa ttcagaatat ggtaaagtcg CD 101 ctcccggatg gggaactact cctctaatgg gtatagcaat gggtttattt CD 151 gcagtttCtt Cagttattat cttagaacCc tataattctt ctgttttatt CD 201 agatggagtt tccgtaagct ggtag FT EDITED CDNA CD 1 atggctacac aaattattga tgacactcct aagactaaag ggagacgaag CD 51 tggtatagga aatatatTaa aaccacttaa ttcagaatat ggtaaagtcg CD 101 ctcccggatg gggaactact cctctaatgg gtatagcaat gggtttattt CD 151 gcagtttTtt Tagttattat cttagaacTc tataattctt ctgttttatt CD 201 agatggagtt tccgtaagct ggtag SQ SEQUENCE 75 AA; MATQIIDDTP KTKGRRSGIG NILKPLNSEY GKVAPGWGTT PLMGIAMGLF AVFLVIILEL YNSSVLLDGV SVSW* // ID AB086179_58 STANDARD; PRT; 216 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : petB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55379.1 FT PROTEIN_NAME : cytochrome b6 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 3/0 FT EDITING : 27 F(TTt) -> P(CCt) FT EDITING : 33 S(tCt) -> F(tTt) FT EDITING : 58 H(Cat) -> Y(Tat) FT EDITING : 60 L(cTa) -> P(cCa) FT EDITING : 89 L(tTa) -> S(tCa) FT EDITING : 95 S(tCa) -> L(tTa) FT EDITING : 99 P(cCa) -> L(cTa) FT EDITING : 103 C(Tgc) -> R(Cgc) FT EDITING : 113 L(cTt) -> P(cCt) FT EDITING : 124 S(tCa) -> L(tTa) FT EDITING : 127 S(tCa) -> L(tTa) FT EDITING : 142 *(Taa) -> Q(Caa) FT EDITING : 159 S(Tct) -> P(Cct) FT EDITING : 177 *(Taa) -> Q(Caa) FT EDITING : 188 I(aTt) -> T(aCt) FT EDITING : 191 S(tCa) -> L(tTa) FT EDITING : 193 P(cCc) -> L(cTc) FT EDITING : 198 P(cCt) -> L(cTt) FT EDITING : 200 S(tCa) -> L(tTa) FT EDITING : 203 S(tCc) -> F(tTc) FT EDITING : 214 L(cTa) -> P(cCa) FT CODON_START : 1 CL CDNALEN 648 NT; CD 1 atgggtaaag tatacgattg gttcgaggaa cgtctagaaa ttcaagcgat CD 51 tgcggatgat ataactagta aatatgttTT tcctcatgtg aatatatCtt CD 101 attgtttagg tggaattaca ttaacttgtt tcctagtaca agtagctagt CD 151 ggttttgcga tgactttcta cCatcgtcTa acagttacag aagcttttgc CD 201 ttctgttcaa tacataatga ctgaagttaa ctttggttgg ttaattagat CD 251 cagttcatag atggtTagcc agtatgatgg tttCaatgat gattcCacat CD 301 gtatttTgcg tgtatcttac aggtggtttc aaaaaacTtc gtgaattgac CD 351 ttgggttaca ggtgtaattt CagctgtatC aacggtttct ttcggtgtaa CD 401 ctggttattc cttaccttgg gatTaaattg gttattgggc cgtaaaaata CD 451 gtgactggtg tacctgaggc tattTcttta gtgggatcct ccttagttga CD 501 gttactacgt ggaagtgtta gtgtgggtTa atctacattg actcgttttt CD 551 atagtttaca taTttttgta tCacctcCcc ttactgctgt acCtatgtCa CD 601 atgcattCct tgatgatccg taagcaaggt atatcgggtc Tattatga FT EDITED CDNA CD 1 atgggtaaag tatacgattg gttcgaggaa cgtctagaaa ttcaagcgat CD 51 tgcggatgat ataactagta aatatgttCC tcctcatgtg aatatatTtt CD 101 attgtttagg tggaattaca ttaacttgtt tcctagtaca agtagctagt CD 151 ggttttgcga tgactttcta cTatcgtcCa acagttacag aagcttttgc CD 201 ttctgttcaa tacataatga ctgaagttaa ctttggttgg ttaattagat CD 251 cagttcatag atggtCagcc agtatgatgg tttTaatgat gattcTacat CD 301 gtatttCgcg tgtatcttac aggtggtttc aaaaaacCtc gtgaattgac CD 351 ttgggttaca ggtgtaattt TagctgtatT aacggtttct ttcggtgtaa CD 401 ctggttattc cttaccttgg gatCaaattg gttattgggc cgtaaaaata CD 451 gtgactggtg tacctgaggc tattCcttta gtgggatcct ccttagttga CD 501 gttactacgt ggaagtgtta gtgtgggtCa atctacattg actcgttttt CD 551 atagtttaca taCttttgta tTacctcTcc ttactgctgt acTtatgtTa CD 601 atgcattTct tgatgatccg taagcaaggt atatcgggtc Cattatga SQ SEQUENCE 216 AA; MGKVYDWFEE RLEIQAIADD ITSKYVPPHV NIFYCLGGIT LTCFLVQVAS GFAMTFYYRP TVTEAFASVQ YIMTEVNFGW LIRSVHRWSA SMMVLMMILH VFRVYLTGGF KKPRELTWVT GVILAVLTVS FGVTGYSLPW DQIGYWAVKI VTGVPEAIPL VGSSLVELLR GSVSVGQSTL TRFYSLHTFV LPLLTAVLML MHFLMIRKQG ISGPL* // ID AB086179_59 STANDARD; PRT; 161 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : petD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55380.1 FT PROTEIN_NAME : cytochrome b/f complex subunit IV FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 3/2 FT EDITING : 16 V(gTt) -> A(gCt) FT EDITING : 30 L(cTt) -> P(cCt) FT EDITING : 36 S(TCt) -> L(CTt) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 38 H(Cat) -> Y(Tat) FT EDITING : 40 S(tCt) -> F(tTt) FT EDITING : 41 L(TTa) -> P(CCa) FT EDITING : 72 L(cTt) -> P(cCt) FT EDITING : 85 S(tCt) -> F(tTt) FT EDITING : 86 *(Taa) -> Q(Caa) FT EDITING : 88 P(cCc) -> L(cTc) FT EDITING : 89 C(Tgt) -> R(Cgt) FT EDITING : 105 L(cTt) -> P(cCt) FT EDITING : 117 A(gCt) -> V(gTt) FT EDITING : 121 *(Taa) -> Q(Caa) FT EDITING : 123 S(Tcg) -> P(Ccg) FT EDITING : 133 F(ttT) -> F(ttC) FT EDITING : 134 P(CCg) -> L(TTg) FT EDITING : 161 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 483 NT; CD 1 atgggagtaa caaagaaacc cgatttaagt gatcctgtat taagggTtaa CD 51 attagctaaa ggtatgggac ataattatta tggagaacTt gcttggccta CD 101 atgatTCttC aCatatctCt TTagtagtaa ttttaggtac tattgcatgt CD 151 actgtcggtt tagccgtctt agaaccttct atgattggtg aaccggcaaa CD 201 tccatttgct acccTtctag aaatattgcc tgaatggtat ttctttcctg CD 251 tatCtTaaat acCcTgtaca gtacctaata aactattagg tgttcttcta CD 301 atggctgcag tacTtgcggg attattaaca gtaccttttt tagaaaatgC CD 351 taataaattt TaaaatTcgt ttcgtcgtcc agtagctaca acaattttTC CD 401 Cgattggtac tgcagtagct atttggctgg gaattggggc agctctacct CD 451 attgataaat cattaacttt aggtctttct Caa FT EDITED CDNA CD 1 atgggagtaa caaagaaacc cgatttaagt gatcctgtat taagggCtaa CD 51 attagctaaa ggtatgggac ataattatta tggagaacCt gcttggccta CD 101 atgatCTttT aTatatctTt CCagtagtaa ttttaggtac tattgcatgt CD 151 actgtcggtt tagccgtctt agaaccttct atgattggtg aaccggcaaa CD 201 tccatttgct acccCtctag aaatattgcc tgaatggtat ttctttcctg CD 251 tatTtCaaat acTcCgtaca gtacctaata aactattagg tgttcttcta CD 301 atggctgcag tacCtgcggg attattaaca gtaccttttt tagaaaatgT CD 351 taataaattt CaaaatCcgt ttcgtcgtcc agtagctaca acaattttCT CD 401 Tgattggtac tgcagtagct atttggctgg gaattggggc agctctacct CD 451 attgataaat cattaacttt aggtctttct Taa SQ SEQUENCE 161 AA; MGVTKKPDLS DPVLRAKLAK GMGHNYYGEP AWPNDLLYIF PVVILGTIAC TVGLAVLEPS MIGEPANPFA TPLEILPEWY FFPVFQILRT VPNKLLGVLL MAAVPAGLLT VPFLENVNKF QNPFRRPVAT TIFLIGTAVA IWLGIGAALP IDKSLTLGLS * // ID AB086179_60 STANDARD; PRT; 341 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpoA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55381.1 FT PROTEIN_NAME : RNA polymerase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 96875 - 97897 FT DIRECTIONS : negative FT EDITING : 31 C(Tgc) -> R(Cgc) FT EDITING : 35 P(Cct) -> S(Tct) FT EDITING : 50 *(Tga) -> R(Cga) FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 88 S(tCa) -> L(tTa) FT EDITING : 96 P(cCt) -> L(cTt) FT EDITING : 104 *(Taa) -> Q(Caa) FT EDITING : 170 S(tCt) -> F(tTt) FT EDITING : 176 S(tCt) -> F(tTt) FT EDITING : 196 *(Taa) -> Q(Caa) FT EDITING : 209 P(cCc) -> L(cTc) FT EDITING : 211 F(TTt) -> P(CCt) FT EDITING : 225 S(tCa) -> L(tTa) FT EDITING : 226 S(tCt) -> F(tTt) FT EDITING : 285 G(ggC) -> G(ggT) FT EDITING : 297 F(Ttt) -> L(Ctt) FT EDITING : 298 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1023 NT; CD 1 atgattcaaa atgaaatacc aatccctgct gaagcgctgc aatggaagtg CD 51 catcgaatct aaaatcgaca gtgagcgtct tcactatggt Tgctttgcta CD 101 taCctccact tagaccaggt caagctaata ccgttggaat tgctataTga CD 151 agagcctCac tcggagaaat agaggggaca tgtattacat atgtaaaatt CD 201 tgaaaaagtg acacatgaat attctaccat aatggggatt caggaatcag CD 251 tacatgatat ttCaataaat ttaaaagaaa ttgtacCtaa gagtaattct CD 301 tataaaactT aagaagcatc tatttctatt cttgggccta aaagagtaac CD 351 tgctgaagac attgtattac catcctccgt cgaggtaatt gatgctacgc CD 401 aacacatagc caccataact aaagctgttt attttaatat taaattggga CD 451 ataagaaaag accgtggata tcgtatagaa aatcctgtaa agtatgaaga CD 501 tggaaattCt gctgtcaacg ctgcttCtac gcctattaga aatgctaatt CD 551 atagtgttca ttcttttgaa aatgagaagg aaaaaTaaga aatacttttt CD 601 attgaagtat ggactaatgg aagtcCcacc TTtaaagaag cacttcgtga CD 651 agcttctcaa agtttaatta attCatCtat tccccttttg catgagaaaa CD 701 aggaacggga gaatcgtaaa ctcgaaaata aagatgaata taatgtgctt CD 751 cgttcttgct tctcattgac taatatagga gaagtaagga aagaaatttc CD 801 attcaaacat atatttattg atcaactaga attacctgcg agagcatata CD 851 atggCctcaa aaaggttgat gtacatacta tatcagacTt ttCaaattat CD 901 agtcaagaag atttgatgaa gataaaaaac tttgggaaga agtctattca CD 951 acaagtagta gaggctttac aaaaacattt tgcaatacat ttaccaaaaa CD 1001 ataaattttc tattaatgat taa FT EDITED CDNA CD 1 atgattcaaa atgaaatacc aatccctgct gaagcgctgc aatggaagtg CD 51 catcgaatct aaaatcgaca gtgagcgtct tcactatggt Cgctttgcta CD 101 taTctccact tagaccaggt caagctaata ccgttggaat tgctataCga CD 151 agagcctTac tcggagaaat agaggggaca tgtattacat atgtaaaatt CD 201 tgaaaaagtg acacatgaat attctaccat aatggggatt caggaatcag CD 251 tacatgatat ttTaataaat ttaaaagaaa ttgtacTtaa gagtaattct CD 301 tataaaactC aagaagcatc tatttctatt cttgggccta aaagagtaac CD 351 tgctgaagac attgtattac catcctccgt cgaggtaatt gatgctacgc CD 401 aacacatagc caccataact aaagctgttt attttaatat taaattggga CD 451 ataagaaaag accgtggata tcgtatagaa aatcctgtaa agtatgaaga CD 501 tggaaattTt gctgtcaacg ctgcttTtac gcctattaga aatgctaatt CD 551 atagtgttca ttcttttgaa aatgagaagg aaaaaCaaga aatacttttt CD 601 attgaagtat ggactaatgg aagtcTcacc CCtaaagaag cacttcgtga CD 651 agcttctcaa agtttaatta attTatTtat tccccttttg catgagaaaa CD 701 aggaacggga gaatcgtaaa ctcgaaaata aagatgaata taatgtgctt CD 751 cgttcttgct tctcattgac taatatagga gaagtaagga aagaaatttc CD 801 attcaaacat atatttattg atcaactaga attacctgcg agagcatata CD 851 atggTctcaa aaaggttgat gtacatacta tatcagacCt ttTaaattat CD 901 agtcaagaag atttgatgaa gataaaaaac tttgggaaga agtctattca CD 951 acaagtagta gaggctttac aaaaacattt tgcaatacat ttaccaaaaa CD 1001 ataaattttc tattaatgat taa SQ SEQUENCE 341 AA; MIQNEIPIPA EALQWKCIES KIDSERLHYG RFAISPLRPG QANTVGIAIR RALLGEIEGT CITYVKFEKV THEYSTIMGI QESVHDILIN LKEIVLKSNS YKTQEASISI LGPKRVTAED IVLPSSVEVI DATQHIATIT KAVYFNIKLG IRKDRGYRIE NPVKYEDGNF AVNAAFTPIR NANYSVHSFE NEKEKQEILF IEVWTNGSLT PKEALREASQ SLINLFIPLL HEKKERENRK LENKDEYNVL RSCFSLTNIG EVRKEISFKH IFIDQLELPA RAYNGLKKVD VHTISDLLNY SQEDLMKIKN FGKKSIQQVV EALQKHFAIH LPKNKFSIND * // ID AB086179_61 STANDARD; PRT; 131 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps11 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55382.1 FT PROTEIN_NAME : ribosomal protein S11 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 97935 - 98327 FT DIRECTIONS : negative FT EDITING : 41 *(Taa) -> Q(Caa) FT EDITING : 47 F(tTt) -> S(tCt) FT EDITING : 82 *(Taa) -> Q(Caa) FT EDITING : 118 L(cTg) -> P(cCg) FT CODON_START : 1 CL CDNALEN 393 NT; CD 1 atggcaaaat ctataagaaa aataaattta cgtaaaggta aacgtagaat CD 51 acctagggga gttactcata tccaagccag ttttaataat acaattatta CD 101 ctgttacaga tgtacgcgga Taagtggttt cttggtcttT tgcgggtgct CD 151 tgtggattca aaggtacaaa gaaaagtaca ccttttgctg ctcagactgc CD 201 agcagaaaat gctattcgta ttttaattga tcagggtatg aaaTaagcag CD 251 aagttatgat tagtggtcct ggtcctggaa gagatacagc attacgagct CD 301 attcgtagga gtggtgtagt acttagttat gtacgtgacg taacccctat CD 351 acTgcataat ggatgtaggc ctcctaagaa gagacgtgta taa FT EDITED CDNA CD 1 atggcaaaat ctataagaaa aataaattta cgtaaaggta aacgtagaat CD 51 acctagggga gttactcata tccaagccag ttttaataat acaattatta CD 101 ctgttacaga tgtacgcgga Caagtggttt cttggtcttC tgcgggtgct CD 151 tgtggattca aaggtacaaa gaaaagtaca ccttttgctg ctcagactgc CD 201 agcagaaaat gctattcgta ttttaattga tcagggtatg aaaCaagcag CD 251 aagttatgat tagtggtcct ggtcctggaa gagatacagc attacgagct CD 301 attcgtagga gtggtgtagt acttagttat gtacgtgacg taacccctat CD 351 acCgcataat ggatgtaggc ctcctaagaa gagacgtgta taa SQ SEQUENCE 131 AA; MAKSIRKINL RKGKRRIPRG VTHIQASFNN TIITVTDVRG QVVSWSSAGA CGFKGTKKST PFAAQTAAEN AIRILIDQGM KQAEVMISGP GPGRDTALRA IRRSGVVLSY VRDVTPIPHN GCRPPKKRRV * // ID AB086179_62 STANDARD; PRT; 38 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl36 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55383.1 FT PROTEIN_NAME : ribosomal protein L36 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 98472 - 98585 FT DIRECTIONS : negative FT EDITING : 15 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 114 NT; CD 1 atgaagattc gtgcttctgt tcgcaaaatt tgtgagaatt gtTgattaat CD 51 ccgtaggcga agacgagtca tggtggtttg ttccaatcct aaacataaac CD 101 agaaacaagg ataa FT EDITED CDNA CD 1 atgaagattc gtgcttctgt tcgcaaaatt tgtgagaatt gtCgattaat CD 51 ccgtaggcga agacgagtca tggtggtttg ttccaatcct aaacataaac CD 101 agaaacaagg ataa SQ SEQUENCE 38 AA; MKIRASVRKI CENCRLIRRR RRVMVVCSNP KHKQKQG* // ID AB086179_63 STANDARD; PRT; 79 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : infA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55384.1 FT PROTEIN_NAME : initiation factor 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 98683 - 98919 FT DIRECTIONS : negative FT EDITING : 13 A(gCt) -> V(gTt) FT EDITING : 46 *(Tga) -> R(Cga) FT EDITING : 66 C(Tgt) -> R(Cgt) FT CODON_START : 1 CL CDNALEN 237 NT; CD 1 atggagaaac aaaatttgat tgatatggaa ggtgttgCta ctgaatcact CD 51 ccccaatgct atgtttcgag tttgtctaga taatggatgc caagtcttaa CD 101 ctcacatttc aggaaaaatt cgacgtaatt atataTgaat attaccggga CD 151 gatagagtaa aagtagaatt aagtccttat gatctgacta aaggaTgtat CD 201 aacttatcga cttcgtacta aatcttcaaa tccttaa FT EDITED CDNA CD 1 atggagaaac aaaatttgat tgatatggaa ggtgttgTta ctgaatcact CD 51 ccccaatgct atgtttcgag tttgtctaga taatggatgc caagtcttaa CD 101 ctcacatttc aggaaaaatt cgacgtaatt atataCgaat attaccggga CD 151 gatagagtaa aagtagaatt aagtccttat gatctgacta aaggaCgtat CD 201 aacttatcga cttcgtacta aatcttcaaa tccttaa SQ SEQUENCE 79 AA; MEKQNLIDME GVVTESLPNA MFRVCLDNGC QVLTHISGKI RRNYIRILPG DRVKVELSPY DLTKGRITYR LRTKSSNP* // ID AB086179_64 STANDARD; PRT; 133 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps8 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55385.1 FT PROTEIN_NAME : ribosomal protein S8 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 99068 - 99466 FT DIRECTIONS : negative FT EDITING : 31 P(cCg) -> L(cTg) FT EDITING : 66 *(Tga) -> R(Cga) FT EDITING : 89 P(Ccc) -> S(Tcc) FT EDITING : 105 T(aCt) -> I(aTt) FT EDITING : 107 P(Cca) -> S(Tca) FT EDITING : 110 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 399 NT; CD 1 atgggtaacg atattattgc taatatgatt accgctataa ggaatgctaa CD 51 tctgggaaga gcagaaacag ttgaagtacc agctactaat cCgactagaa CD 101 acattgcaaa aattctttta cgagaaggtt ttatagaaag ttttagcgaa CD 151 caccaagaaa ataaaaattc ttttttgatc tttattctga aatacTgagg CD 201 aaaaaaacga aaaccatata taactacttt gagacgtatt agtaagcctg CD 251 gtttaagaat ttacCccaat tatcaagaaa ttccgagagt tttaggtggt CD 301 acgggaattg ttaCtttaCc aacttctTga ggaattatta cggatcggga CD 351 agctcggcag aagcaagttg gaggagaaat tttgtgttat gtctggtaa FT EDITED CDNA CD 1 atgggtaacg atattattgc taatatgatt accgctataa ggaatgctaa CD 51 tctgggaaga gcagaaacag ttgaagtacc agctactaat cTgactagaa CD 101 acattgcaaa aattctttta cgagaaggtt ttatagaaag ttttagcgaa CD 151 caccaagaaa ataaaaattc ttttttgatc tttattctga aatacCgagg CD 201 aaaaaaacga aaaccatata taactacttt gagacgtatt agtaagcctg CD 251 gtttaagaat ttacTccaat tatcaagaaa ttccgagagt tttaggtggt CD 301 acgggaattg ttaTtttaTc aacttctCga ggaattatta cggatcggga CD 351 agctcggcag aagcaagttg gaggagaaat tttgtgttat gtctggtaa SQ SEQUENCE 133 AA; MGNDIIANMI TAIRNANLGR AETVEVPATN LTRNIAKILL REGFIESFSE HQENKNSFLI FILKYRGKKR KPYITTLRRI SKPGLRIYSN YQEIPRVLGG TGIVILSTSR GIITDREARQ KQVGGEILCY VW* // ID AB086179_65 STANDARD; PRT; 123 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl14 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55386.1 FT PROTEIN_NAME : ribosomal protein L14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 99721 - 100089 FT DIRECTIONS : negative FT EDITING : 48 S(Tct) -> P(Cct) FT EDITING : 104 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 369 NT; CD 1 atgattcaac cccaaactta tttaaatgta gcagacaaca gtggagctcg CD 51 aaaactgatg tgtattcgaa ttctaggagc tagtaatcgt aaatatggca CD 101 atattggtga cataattatt gctgtaacta aggaagcggt aTctaatatg CD 151 cctctaaaaa aatcagaagt agttagagct gtaattgtac gtacttgtaa CD 201 agaagttaga cgtgataatg gaatgaccat aagatttgat gacaatgtag CD 251 ctgctacaac taatcaagag ggaaatccta aaggaactcg agtttttggt CD 301 ccagttgctT gagaatcaag aggatataat tttactaaga taattccact CD 351 agctcctgaa gtgttataa FT EDITED CDNA CD 1 atgattcaac cccaaactta tttaaatgta gcagacaaca gtggagctcg CD 51 aaaactgatg tgtattcgaa ttctaggagc tagtaatcgt aaatatggca CD 101 atattggtga cataattatt gctgtaacta aggaagcggt aCctaatatg CD 151 cctctaaaaa aatcagaagt agttagagct gtaattgtac gtacttgtaa CD 201 agaagttaga cgtgataatg gaatgaccat aagatttgat gacaatgtag CD 251 ctgctacaac taatcaagag ggaaatccta aaggaactcg agtttttggt CD 301 ccagttgctC gagaatcaag aggatataat tttactaaga taattccact CD 351 agctcctgaa gtgttataa SQ SEQUENCE 123 AA; MIQPQTYLNV ADNSGARKLM CIRILGASNR KYGNIGDIII AVTKEAVPNM PLKKSEVVRA VIVRTCKEVR RDNGMTIRFD DNVAATTNQE GNPKGTRVFG PVARESRGYN FTKIIPLAPE VL* // ID AB086179_66 STANDARD; PRT; 137 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl16 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55387.1 FT PROTEIN_NAME : ribosomal protein L16 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 4/0 FT EDITING : 13 H(caT) -> H(caC) FT EDITING : 29 F(tTt) -> S(tCt) FT EDITING : 35 *(Taa) -> Q(Caa) FT EDITING : 104 H(Cat) -> Y(Tat) FT EDITING : 110 L(cTa) -> P(cCa) FT CODON_START : 1 CL CDNALEN 411 NT; CD 1 atgcttagtc ccaaaagagt aaaatttcgt aaacaacaTa gaggaagaat CD 51 gaaaggaata tctactaggg gtaatcagat ttgttTtgga aaatttgctc CD 101 ctTaagcact tgaacctgct tggattacat ctagacaaat agaagcggga CD 151 cgacgggcaa ttagtcgtta tgctcgtcgt ggtggaaaaa tatggatacg CD 201 catatttcct gacaaaccag taactatgcg acctgcagaa acacgtatgg CD 251 gttcgggaaa gggttcccct gaattttggg tatccgttgt taaaccaaat CD 301 aggatacttC atgagatagg tggagtacTa gaagatattg ctaaggcagc CD 351 tataagaata gctgcataca agatgcctat acgtactcaa ttcattattc CD 401 tacatctgta g FT EDITED CDNA CD 1 atgcttagtc ccaaaagagt aaaatttcgt aaacaacaCa gaggaagaat CD 51 gaaaggaata tctactaggg gtaatcagat ttgttCtgga aaatttgctc CD 101 ctCaagcact tgaacctgct tggattacat ctagacaaat agaagcggga CD 151 cgacgggcaa ttagtcgtta tgctcgtcgt ggtggaaaaa tatggatacg CD 201 catatttcct gacaaaccag taactatgcg acctgcagaa acacgtatgg CD 251 gttcgggaaa gggttcccct gaattttggg tatccgttgt taaaccaaat CD 301 aggatacttT atgagatagg tggagtacCa gaagatattg ctaaggcagc CD 351 tataagaata gctgcataca agatgcctat acgtactcaa ttcattattc CD 401 tacatctgta g SQ SEQUENCE 137 AA; MLSPKRVKFR KQHRGRMKGI STRGNQICSG KFAPQALEPA WITSRQIEAG RRAISRYARR GGKIWIRIFP DKPVTMRPAE TRMGSGKGSP EFWVSVVKPN RILYEIGGVP EDIAKAAIRI AAYKMPIRTQ FIILHL* // ID AB086179_67 STANDARD; PRT; 219 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55388.1 FT PROTEIN_NAME : ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 101887 - 102543 FT DIRECTIONS : negative FT EDITING : 151 P(cCt) -> L(cTt) FT EDITING : 186 S(tCa) -> L(tTa) FT EDITING : 190 *(Tga) -> R(Cga) FT EDITING : 201 *(Taa) -> Q(Caa) FT EDITING : 202 I(aTc) -> T(aCc) FT EDITING : 214 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 657 NT; CD 1 atgggacaaa aaattaatcc acttggtttt cgacttgggg ttacgcagaa CD 51 tcactgttcc cattggtttg caaaacctaa taattattac aaacttcttg CD 101 aagaagatga aaaaatgcgt aattgtattt ataattatgt gcgtaagcat CD 151 ataaaaagtt cgtcaaatta tggaggaatt gcacgcattg aaattgaaag CD 201 aaagacagat ttaattcaaa ttgaaatata tacaggattt cctgcccttc CD 251 ttgttgaaag tcgtggtcga ggcattgaag aattaaaagc agatgtacaa CD 301 actgtattga atcttgggaa taggaagctt cgcatggctc taaccgaagt CD 351 ggaagaacca tatacagaac ccaatattct tgcggaatat attgctttac CD 401 aattagaaaa cagagttgct tttagaagaa ctatgaagaa agcgattgaa CD 451 cCtacaagaa agacaagtgt gaaaggtata aagatacaga ttgcaggacg CD 501 tcttaatgga gctgaaatag ctcgtgtcga gtgggctaga gaaggtagag CD 551 ttccatCaca aactattTga gctcaaataa attattgtta ttacccagct CD 601 TaaaTcattt atggagtatt aggaataaag gtatggatat Ctcaaacgga CD 651 agaatga FT EDITED CDNA CD 1 atgggacaaa aaattaatcc acttggtttt cgacttgggg ttacgcagaa CD 51 tcactgttcc cattggtttg caaaacctaa taattattac aaacttcttg CD 101 aagaagatga aaaaatgcgt aattgtattt ataattatgt gcgtaagcat CD 151 ataaaaagtt cgtcaaatta tggaggaatt gcacgcattg aaattgaaag CD 201 aaagacagat ttaattcaaa ttgaaatata tacaggattt cctgcccttc CD 251 ttgttgaaag tcgtggtcga ggcattgaag aattaaaagc agatgtacaa CD 301 actgtattga atcttgggaa taggaagctt cgcatggctc taaccgaagt CD 351 ggaagaacca tatacagaac ccaatattct tgcggaatat attgctttac CD 401 aattagaaaa cagagttgct tttagaagaa ctatgaagaa agcgattgaa CD 451 cTtacaagaa agacaagtgt gaaaggtata aagatacaga ttgcaggacg CD 501 tcttaatgga gctgaaatag ctcgtgtcga gtgggctaga gaaggtagag CD 551 ttccatTaca aactattCga gctcaaataa attattgtta ttacccagct CD 601 CaaaCcattt atggagtatt aggaataaag gtatggatat Ttcaaacgga CD 651 agaatga SQ SEQUENCE 219 AA; MGQKINPLGF RLGVTQNHCS HWFAKPNNYY KLLEEDEKMR NCIYNYVRKH IKSSSNYGGI ARIEIERKTD LIQIEIYTGF PALLVESRGR GIEELKADVQ TVLNLGNRKL RMALTEVEEP YTEPNILAEY IALQLENRVA FRRTMKKAIE LTRKTSVKGI KIQIAGRLNG AEIARVEWAR EGRVPLQTIR AQINYCYYPA QTIYGVLGIK VWIFQTEE* // ID AB086179_68 STANDARD; PRT; 120 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl22 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55389.1 FT PROTEIN_NAME : ribosomal protein L22 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 102592 - 102951 FT DIRECTIONS : negative FT EDITING : 60 F(Ttc) -> L(Ctc) FT CODON_START : 1 CL CDNALEN 360 NT; CD 1 atgaaaacta attactcgaa tttggagacg caagctttag ctaagcatat CD 51 acgtatttcc gcttctaagg taagaagagt tattaatgaa attcgtggtc CD 101 gtttgtatga acaagcacct atgatactag aattcatgct atatagagct CD 151 tgttatcccg tatcacaatt actttctTtc gcagcagcaa atgccagcca CD 201 taatttaggt ttaaataagg ctgattcagt tactagtgaa gtcaaagtag CD 251 atgaaggaac tatgttaaag agatttgaac ctagagctca gggacgtggt CD 301 taccctatac ataaacctac ctctcatata actattgtaa tcaaaaaaaa CD 351 atctacatag FT EDITED CDNA CD 1 atgaaaacta attactcgaa tttggagacg caagctttag ctaagcatat CD 51 acgtatttcc gcttctaagg taagaagagt tattaatgaa attcgtggtc CD 101 gtttgtatga acaagcacct atgatactag aattcatgct atatagagct CD 151 tgttatcccg tatcacaatt actttctCtc gcagcagcaa atgccagcca CD 201 taatttaggt ttaaataagg ctgattcagt tactagtgaa gtcaaagtag CD 251 atgaaggaac tatgttaaag agatttgaac ctagagctca gggacgtggt CD 301 taccctatac ataaacctac ctctcatata actattgtaa tcaaaaaaaa CD 351 atctacatag SQ SEQUENCE 120 AA; MKTNYSNLET QALAKHIRIS ASKVRRVINE IRGRLYEQAP MILEFMLYRA CYPVSQLLSL AAANASHNLG LNKADSVTSE VKVDEGTMLK RFEPRAQGRG YPIHKPTSHI TIVIKKKST* // ID AB086179_69 STANDARD; PRT; 93 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps19 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55390.1 FT PROTEIN_NAME : ribosomal protein S19 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 102970 - 103248 FT DIRECTIONS : negative FT EDITING : 15 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 279 NT; CD 1 atgacacgtt tacttaaaaa aggtcctttt gtggcttatc attCactgga CD 51 gaaaatagag gatcttaata taaagagaga aaaaaaaata atagtaactt CD 101 ggtcccgtgc atcaacaatt gtacctacaa tgattggtca tactattgct CD 151 gtttataatg ggcaggaaca tttacccatt tatataacag atcgtatggt CD 201 aggtcataaa ttaggtgaat ttgcacttac tagagttttt aaaggacatg CD 251 cgaagagtga taaaaaatct cgtcgttaa FT EDITED CDNA CD 1 atgacacgtt tacttaaaaa aggtcctttt gtggcttatc attTactgga CD 51 gaaaatagag gatcttaata taaagagaga aaaaaaaata atagtaactt CD 101 ggtcccgtgc atcaacaatt gtacctacaa tgattggtca tactattgct CD 151 gtttataatg ggcaggaaca tttacccatt tatataacag atcgtatggt CD 201 aggtcataaa ttaggtgaat ttgcacttac tagagttttt aaaggacatg CD 251 cgaagagtga taaaaaatct cgtcgttaa SQ SEQUENCE 93 AA; MTRLLKKGPF VAYHLLEKIE DLNIKREKKI IVTWSRASTI VPTMIGHTIA VYNGQEHLPI YITDRMVGHK LGEFALTRVF KGHAKSDKKS RR* // ID AB086179_70 STANDARD; PRT; 278 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55391.1 FT PROTEIN_NAME : ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 133/0 FT EDITING : 26 *(Tga) -> R(Cga) FT EDITING : 52 *(Tga) -> R(Cga) FT EDITING : 75 S(tCt) -> F(tTt) FT EDITING : 85 S(Tcc) -> P(Ccc) FT EDITING : 87 C(Tgt) -> R(Cgt) FT EDITING : 105 P(cCa) -> L(cTa) FT EDITING : 144 A(gCa) -> V(gTa) FT EDITING : 203 *(Tga) -> R(Cga) FT EDITING : 227 L(cTc) -> P(cCc) FT EDITING : 231 S(Tct) -> P(Cct) FT EDITING : 232 Y(Tat) -> H(Cat) FT CODON_START : 1 CL CDNALEN 834 NT; CD 1 atggtcatcc gttcatacag agcctacacc ctaggaacac gaaatcgatc CD 51 cgtttttgaa ttcgaaaaaa aagttTgatc taaacctcag aaaaaattaa CD 101 cctttagaca acactgtaaa aaaggtcgta ataatagagg cattattaca CD 151 agcTgacata gaggaggcgg acataaacgt atatatcgta aaattgattt CD 201 tcttcgagat aagaaggata tttCtggaag aattgctact atagaatatg CD 251 atTccaacTg taatacattt atatgtctta cctattacga agatggtgaa CD 301 aagaaatata ttcCatatcc tcaaggaatg agaattgggg atagtgtagt CD 351 gtctagtact gaagctccta tttcaatagg aaatgcctta cctttgacca CD 401 atatgccttt aggtacagct atacataatg Cagaaataac acctggaaaa CD 451 ggtggacaat tagcaagagc agctggtgct gtagcaaaaa tcattgcaaa CD 501 agaaggtcga ttggctacat taagattacc ttctggagag gttcggctaa CD 551 tatctcaaaa atgtttagca actattggac aagtaggtaa ttctgatgct CD 601 aataatTgaa ccataggaaa agctggatct aaacgttggc tgggtaaacg CD 651 acccaaagta agaggagtag ttatgaaccT catagatcat TctTatggag CD 701 gtggtgaagg acgagctccg attggtagaa aaaaaccatt aaccccttgg CD 751 ggccatcctg cacttggaag aaaaactcga agaaataaaa aatacagtga CD 801 tattttaatc gttcgtcgcc gtaagaataa ttag FT EDITED CDNA CD 1 atggtcatcc gttcatacag agcctacacc ctaggaacac gaaatcgatc CD 51 cgtttttgaa ttcgaaaaaa aagttCgatc taaacctcag aaaaaattaa CD 101 cctttagaca acactgtaaa aaaggtcgta ataatagagg cattattaca CD 151 agcCgacata gaggaggcgg acataaacgt atatatcgta aaattgattt CD 201 tcttcgagat aagaaggata tttTtggaag aattgctact atagaatatg CD 251 atCccaacCg taatacattt atatgtctta cctattacga agatggtgaa CD 301 aagaaatata ttcTatatcc tcaaggaatg agaattgggg atagtgtagt CD 351 gtctagtact gaagctccta tttcaatagg aaatgcctta cctttgacca CD 401 atatgccttt aggtacagct atacataatg Tagaaataac acctggaaaa CD 451 ggtggacaat tagcaagagc agctggtgct gtagcaaaaa tcattgcaaa CD 501 agaaggtcga ttggctacat taagattacc ttctggagag gttcggctaa CD 551 tatctcaaaa atgtttagca actattggac aagtaggtaa ttctgatgct CD 601 aataatCgaa ccataggaaa agctggatct aaacgttggc tgggtaaacg CD 651 acccaaagta agaggagtag ttatgaaccC catagatcat CctCatggag CD 701 gtggtgaagg acgagctccg attggtagaa aaaaaccatt aaccccttgg CD 751 ggccatcctg cacttggaag aaaaactcga agaaataaaa aatacagtga CD 801 tattttaatc gttcgtcgcc gtaagaataa ttag SQ SEQUENCE 278 AA; MVIRSYRAYT LGTRNRSVFE FEKKVRSKPQ KKLTFRQHCK KGRNNRGIIT SRHRGGGHKR IYRKIDFLRD KKDIFGRIAT IEYDPNRNTF ICLTYYEDGE KKYILYPQGM RIGDSVVSST EAPISIGNAL PLTNMPLGTA IHNVEITPGK GGQLARAAGA VAKIIAKEGR LATLRLPSGE VRLISQKCLA TIGQVGNSDA NNRTIGKAGS KRWLGKRPKV RGVVMNPIDH PHGGGEGRAP IGRKKPLTPW GHPALGRKTR RNKKYSDILI VRRRKNN* // ID AB086179_71 STANDARD; PRT; 92 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl23 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55392.1 FT PROTEIN_NAME : ribosomal protein L23 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 104799 - 105074 FT DIRECTIONS : negative FT EDITING : 21 *(Taa) -> Q(Caa) FT EDITING : 43 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 276 NT; CD 1 atggataaag tgaaataccc agttcttaca gaaaaaacta ttcgtctact CD 51 agaaagaaat Taatactgtt tcgatgttga tttaaaggct agcaaaaccg CD 101 aaataaaaca atggatacaa gatttttCta aggtaaaggt ggtagccatg CD 151 aatagtcatc gacctccaaa aaagaagaaa cggataggtc ctgtactggg CD 201 atatccggta cgttataaac gaatgattat cacacttgaa tcaaattatt CD 251 ccattccact attcttaaac aaataa FT EDITED CDNA CD 1 atggataaag tgaaataccc agttcttaca gaaaaaacta ttcgtctact CD 51 agaaagaaat Caatactgtt tcgatgttga tttaaaggct agcaaaaccg CD 101 aaataaaaca atggatacaa gatttttTta aggtaaaggt ggtagccatg CD 151 aatagtcatc gacctccaaa aaagaagaaa cggataggtc ctgtactggg CD 201 atatccggta cgttataaac gaatgattat cacacttgaa tcaaattatt CD 251 ccattccact attcttaaac aaataa SQ SEQUENCE 92 AA; MDKVKYPVLT EKTIRLLERN QYCFDVDLKA SKTEIKQWIQ DFFKVKVVAM NSHRPPKKKK RIGPVLGYPV RYKRMIITLE SNYSIPLFLN K* // ID AB086179_72 STANDARD; PRT; 501 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55393.1 FT PROTEIN_NAME : NADH dehydrogenase ND2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 242/0 FT EDITING : 89 P(Ccg) -> S(Tcg) FT EDITING : 120 T(aCa) -> I(aTa) FT EDITING : 145 F(tTc) -> S(tCc) FT EDITING : 157 *(Tga) -> R(Cga) FT EDITING : 158 F(tTc) -> S(tCc) FT EDITING : 167 P(cCt) -> L(cTt) FT EDITING : 174 P(Ccc) -> S(Tcc) FT EDITING : 180 S(tCt) -> F(tTt) FT EDITING : 197 L(Ctt) -> F(Ttt) FT EDITING : 294 S(tCt) -> F(tTt) FT EDITING : 310 L(tTg) -> S(tCg) FT EDITING : 335 H(Cac) -> Y(Tac) FT EDITING : 341 L(Ctt) -> F(Ttt) FT EDITING : 368 S(tCa) -> L(tTa) FT EDITING : 373 L(cTt) -> P(cCt) FT EDITING : 379 P(cCt) -> L(cTt) FT EDITING : 399 P(cCt) -> L(cTt) FT EDITING : 402 S(tCt) -> F(tTt) FT EDITING : 454 L(tTg) -> S(tCg) FT EDITING : 476 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 atgaaattag attttggttc atttttatca gatggaagta gtattttacc CD 51 agaatgtatt ttaatttcta gtttaattat cattctattg atagatctaa CD 101 cctctgaaaa aaagacatat tggttatatt tcatttcatt aacaagtttg CD 151 atcataagta taactgtcct gttatttcaa ttaaaggaag aacctatttt CD 201 tagtttctca ggcagttttc aaacagacgg ttttaatgga atattccgaa CD 251 tctctattgc atttCcgtca cttctatgta ttcccttatc tatggaatat CD 301 atgaaatgta caaaaatggc gattactgaa tctttaattt ttttgttaac CD 351 agctactaCa ggaggaatgt ttttatgcgg tgctaatgat ttaataataa CD 401 tatttattac tctagaatgt ttaagtttat cctTctattt attatccgga CD 451 tatactaaga aagatgtaTg atTcaatgaa gctgctatga agtatttacC CD 501 tatgggtgga gcaagttctC ccattctggc ttatggttCt tcatggttat CD 551 acggtttatc tggggggaaa atccaacttc aagagattCt taatggtctt CD 601 ataaacacac aaatgtataa ctctacaagt atttcgatcg tgcttatatt CD 651 tattattgca ggaatcgcat tcaaactttc tttagtacct tttcatcaat CD 701 ggactcctga tgtatatgaa ggagccccta cctcagtcat tgctttcttt CD 751 tctgttactt caaaaatagc cggtttagct ttagctacta gaatcttcaa CD 801 cacagttttt ttttcatcac tgaacgagtg gcatctaatt ctagaaataa CD 851 tagctattct aagtatgatc ttaggtaatt Ctattgctat aacgcaaaca CD 901 agtatgaaac gtatgcttgc atattcttTg ataagtcaaa ttggatattt CD 951 tatgattgga gtaattgcgg gagactctaa tgggtatgca agcatgataa CD 1001 ctCacatgct attctacatt Cttatgaatc taggaacttt tgcttgtatt CD 1051 acattattcg gtttacgcac tggaacggac aacattcggg attatgcagg CD 1101 gtCatataaa aaagatcTtc tattggcatc ttttcCtgct ttatctttat CD 1151 tatccttagg aggtattcct cccttagctg ggtttttcgg aaaacCttac CD 1201 ctctCttggt gtgggtggaa agcgggtcta tacttatcag tctccgtagg CD 1251 acttttcaca agtgtaatct ctatatatta ctatttacga atagtcaaat CD 1301 tgattgtgac taaggaaaac gaagaaacaa cttcttatat tcggaagtat CD 1351 aaaacttctt Tgaattattt agtatcaaaa agtcctattg aatttagtat CD 1401 cattatatgt gtaataggat caacctCttc gggaatagtg attaaccccg CD 1451 tcattgctat tgttgaaaaa acaatatctc taagtagttt tattaataac CD 1501 taa FT EDITED CDNA CD 1 atgaaattag attttggttc atttttatca gatggaagta gtattttacc CD 51 agaatgtatt ttaatttcta gtttaattat cattctattg atagatctaa CD 101 cctctgaaaa aaagacatat tggttatatt tcatttcatt aacaagtttg CD 151 atcataagta taactgtcct gttatttcaa ttaaaggaag aacctatttt CD 201 tagtttctca ggcagttttc aaacagacgg ttttaatgga atattccgaa CD 251 tctctattgc atttTcgtca cttctatgta ttcccttatc tatggaatat CD 301 atgaaatgta caaaaatggc gattactgaa tctttaattt ttttgttaac CD 351 agctactaTa ggaggaatgt ttttatgcgg tgctaatgat ttaataataa CD 401 tatttattac tctagaatgt ttaagtttat cctCctattt attatccgga CD 451 tatactaaga aagatgtaCg atCcaatgaa gctgctatga agtatttacT CD 501 tatgggtgga gcaagttctT ccattctggc ttatggttTt tcatggttat CD 551 acggtttatc tggggggaaa atccaacttc aagagattTt taatggtctt CD 601 ataaacacac aaatgtataa ctctacaagt atttcgatcg tgcttatatt CD 651 tattattgca ggaatcgcat tcaaactttc tttagtacct tttcatcaat CD 701 ggactcctga tgtatatgaa ggagccccta cctcagtcat tgctttcttt CD 751 tctgttactt caaaaatagc cggtttagct ttagctacta gaatcttcaa CD 801 cacagttttt ttttcatcac tgaacgagtg gcatctaatt ctagaaataa CD 851 tagctattct aagtatgatc ttaggtaatt Ttattgctat aacgcaaaca CD 901 agtatgaaac gtatgcttgc atattcttCg ataagtcaaa ttggatattt CD 951 tatgattgga gtaattgcgg gagactctaa tgggtatgca agcatgataa CD 1001 ctTacatgct attctacatt Tttatgaatc taggaacttt tgcttgtatt CD 1051 acattattcg gtttacgcac tggaacggac aacattcggg attatgcagg CD 1101 gtTatataaa aaagatcCtc tattggcatc ttttcTtgct ttatctttat CD 1151 tatccttagg aggtattcct cccttagctg ggtttttcgg aaaacTttac CD 1201 ctctTttggt gtgggtggaa agcgggtcta tacttatcag tctccgtagg CD 1251 acttttcaca agtgtaatct ctatatatta ctatttacga atagtcaaat CD 1301 tgattgtgac taaggaaaac gaagaaacaa cttcttatat tcggaagtat CD 1351 aaaacttctt Cgaattattt agtatcaaaa agtcctattg aatttagtat CD 1401 cattatatgt gtaataggat caacctTttc gggaatagtg attaaccccg CD 1451 tcattgctat tgttgaaaaa acaatatctc taagtagttt tattaataac CD 1501 taa SQ SEQUENCE 501 AA; MKLDFGSFLS DGSSILPECI LISSLIIILL IDLTSEKKTY WLYFISLTSL IISITVLLFQ LKEEPIFSFS GSFQTDGFNG IFRISIAFSS LLCIPLSMEY MKCTKMAITE SLIFLLTATI GGMFLCGAND LIIIFITLEC LSLSSYLLSG YTKKDVRSNE AAMKYLLMGG ASSSILAYGF SWLYGLSGGK IQLQEIFNGL INTQMYNSTS ISIVLIFIIA GIAFKLSLVP FHQWTPDVYE GAPTSVIAFF SVTSKIAGLA LATRIFNTVF FSSLNEWHLI LEIIAILSMI LGNFIAITQT SMKRMLAYSS ISQIGYFMIG VIAGDSNGYA SMITYMLFYI FMNLGTFACI TLFGLRTGTD NIRDYAGLYK KDPLLASFLA LSLLSLGGIP PLAGFFGKLY LFWCGWKAGL YLSVSVGLFT SVISIYYYLR IVKLIVTKEN EETTSYIRKY KTSSNYLVSK SPIEFSIIIC VIGSTFSGIV INPVIAIVEK TISLSSFINN * // ID AB086179_73 STANDARD; PRT; 156 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps7 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55394.1 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 110206 - 110673 FT DIRECTIONS : negative FT EDITING : 21 *(Tga) -> R(Cga) FT EDITING : 71 S(Tct) -> P(Cct) FT EDITING : 86 *(Taa) -> Q(Caa) FT EDITING : 108 F(tTt) -> S(tCt) FT EDITING : 124 S(tCa) -> L(tTa) FT EDITING : 127 V(gTt) -> A(gCt) FT CODON_START : 1 CL CDNALEN 468 NT; CD 1 atgtcgcgcc gaggtactac agagaaacaa atcgaaaaac ctgatccaat CD 51 ttatcgtaac Tgattggtta acttgttggt taatcgtatc ttgaggaatg CD 101 gaaaaaaatc attggcttat cgaattcttt atggagccat gagaaatatt CD 151 agacgagcaa cgaagaaaaa tccattatcc gtattacgtc aagcagtacg CD 201 tagagtaact Tctaatgtta cggtaaaagc acgacgtgta ggtggttcga CD 251 cctatTaagt ccccattgaa atagaatctt cacaaggaaa agcgcttgct CD 301 attcgttggt tattagtggc atTtaaaaaa cgtccaggtc gaaatatggc CD 351 ttttaaattg agttacgaat CaatagatgT tgctagggat aatggaaatg CD 401 ctgtgcgtaa aagagaggaa actcatagaa tggcagaggc taatagagct CD 451 ttcgctcatt ttcgctaa FT EDITED CDNA CD 1 atgtcgcgcc gaggtactac agagaaacaa atcgaaaaac ctgatccaat CD 51 ttatcgtaac Cgattggtta acttgttggt taatcgtatc ttgaggaatg CD 101 gaaaaaaatc attggcttat cgaattcttt atggagccat gagaaatatt CD 151 agacgagcaa cgaagaaaaa tccattatcc gtattacgtc aagcagtacg CD 201 tagagtaact Cctaatgtta cggtaaaagc acgacgtgta ggtggttcga CD 251 cctatCaagt ccccattgaa atagaatctt cacaaggaaa agcgcttgct CD 301 attcgttggt tattagtggc atCtaaaaaa cgtccaggtc gaaatatggc CD 351 ttttaaattg agttacgaat TaatagatgC tgctagggat aatggaaatg CD 401 ctgtgcgtaa aagagaggaa actcatagaa tggcagaggc taatagagct CD 451 ttcgctcatt ttcgctaa SQ SEQUENCE 156 AA; MSRRGTTEKQ IEKPDPIYRN RLVNLLVNRI LRNGKKSLAY RILYGAMRNI RRATKKNPLS VLRQAVRRVT PNVTVKARRV GGSTYQVPIE IESSQGKALA IRWLLVASKK RPGRNMAFKL SYELIDAARD NGNAVRKREE THRMAEANRA FAHFR* // ID AB086179_74 STANDARD; PRT; 733 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhF FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55396.1 FT PROTEIN_NAME : NADH dehydrogenase ND5 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 123299 - 125497 FT DIRECTIONS : negative FT EDITING : 27 P(cCt) -> L(cTt) FT EDITING : 46 S(tCa) -> L(tTa) FT EDITING : 70 *(Taa) -> Q(Caa) FT EDITING : 75 R(Cgg) -> W(Tgg) FT EDITING : 83 S(tCg) -> L(tTg) FT EDITING : 91 L(cTa) -> P(cCa) FT EDITING : 125 L(Ctt) -> F(Ttt) FT EDITING : 128 P(cCt) -> L(cTt) FT EDITING : 183 C(Tgc) -> R(Cgc) FT EDITING : 194 S(tCa) -> L(tTa) FT EDITING : 209 S(tCt) -> F(tTt) FT EDITING : 223 L(cTt) -> P(cCt) FT EDITING : 259 F(TTT) -> P(CCC) FT EDITING : 282 L(cTc) -> P(cCc) FT EDITING : 291 T(aCg) -> M(aTg) FT EDITING : 303 S(tCa) -> L(tTa) FT EDITING : 311 S(tCt) -> F(tTt) FT EDITING : 322 L(CTg) -> S(TCg) FT EDITING : 334 P(cCa) -> L(cTa) FT EDITING : 344 S(tCt) -> F(tTt) FT EDITING : 346 F(Ttt) -> L(Ctt) FT EDITING : 355 S(tCa) -> L(tTa) FT EDITING : 366 P(Cct) -> S(Tct) FT EDITING : 374 C(Tgt) -> R(Cgt) FT EDITING : 379 *(Taa) -> Q(Caa) FT EDITING : 399 P(CCg) -> L(TTg) FT EDITING : 403 P(cCt) -> L(cTt) FT EDITING : 410 L(cTt) -> P(cCt) FT EDITING : 427 H(Cac) -> Y(Tac) FT EDITING : 445 H(Cac) -> Y(Tac) FT EDITING : 463 S(tCt) -> F(tTt) FT EDITING : 492 S(tCa) -> L(tTa) FT EDITING : 550 S(tCa) -> L(tTa) FT EDITING : 634 L(cTt) -> P(cCt) FT CODON_START : 1 CL CDNALEN 2199 NT; CD 1 atgcaactta tatatcaatg tgcttggatt gtccctctgt gtccacttat CD 51 atcttctatt ctaataggat taggattacC tttttttgag aagtctacaa CD 101 aaagtattcg tcgtatatgt gctattagtt gtatctCatc attaagtgta CD 151 gctacagtca tttgctacaa tctctcctac gaacaaatca tagataattc CD 201 gatctatTaa tactcatggt caCggatctc aaatggagat atcgtttCgg CD 251 aattcggtta tttaattgat cTattaactt gtataatgtt ggtactagtt CD 301 actagtgtag ccattatagt tatgatttat agtgatggtt acatgtctca CD 351 cgatgaagga tatgttaggt ttCttgttta tcCtagtctt ttcactgcgt CD 401 ctatgttagg attagtactt agccctaatt taatacaaat ttatattttt CD 451 tgggaattag taggaatgtg ttcttattta ttaataggtt tttggtttac CD 501 tagacccagt gcagctaacg cctgtcaaaa agcttttatt actaatTgca CD 551 taggagattt tggattacta ttaggaattt Caggtttcta ttggataact CD 601 ggtagtttcg aatttgaaaa tttgtCtaaa ggatttaagg atttacttat CD 651 taataatgaa gttagtcTtt tctttgctat cttatgtgct tcctttctat CD 701 ttctaggtcc ggtagcaaaa tctgcacaat ttccactcca cgtatggttg CD 751 cctgatgcta tggaaggacc cacaTTTatt tcggctctga tccatgcagc CD 801 tactatggta gcagcaggaa tctatctcgt agctagaatg tttcTccttt CD 851 ttgaaacttt acctttcgtt aCgagtgtaa tttcctggac aggtgcagta CD 901 actgcttCat taggggctac tttagccttc tCtcaaaaag atcttaaaag CD 951 aggtttagct tatCTgacaa tgtctcaact aggttatatg atgttagctc CD 1001 Caggtatagg ttcctataga gctggtttgt CtcacTttat aacacatgct CD 1051 tattctaagg cttCattatt tctcggatca ggatcagtaa ttcatCctat CD 1101 ggaacctatt gttggatatT gtcccgacga aagtTaaaat atgattttta CD 1151 tgggtggatt gaggaagcat atgccaatta caggaacaac ttttCCgtta CD 1201 ggtacacCtt ctttatgtgg tattccacTt ttcgcttgtt tctggtccaa CD 1251 agatgagatt attgcggata gttggttaCa ctcccctttt attggatgga CD 1301 tagccttgct cacagcgggt ttaacttcct ttCacatgtt tcgcatctac CD 1351 tttttaacgt tcgaaggtga gtttagagct aattcttCta aagaaaatac CD 1401 tcctgtttct tctgtttctt tatggggaga attcagattt gaggaatttg CD 1451 gtgaaaaaaa agcagattct gtttCacaaa ttgtcgaaaa aagttctcca CD 1501 aaagagtttt ttcgattcgt acaaagtaat cgagaatcaa gtgaaacaca CD 1551 aataggaaat tatctatctg cttacccatc aaaagaacca atccattttt CD 1601 tatatcccaa agaatcagat tatactatgc taattccttt acttatatCa CD 1651 tcaataccca ctttacttat cggttttata ggagctcctc ttcctaatgg CD 1701 acaattaggt tccgatctat tatctcattg gttgaattca tttggaaatt CD 1751 tatctccgga aagattatct gaaaattggt tggaattcat tgaagacgca CD 1801 attacttcaa ttagtatagc ttcttttgga atattctccg ccttcatctt CD 1851 atatggaccg gcctctatct tccctagaga tttagaaaag aaaatagaac CD 1901 Ttcaactaaa aggtgtttgg ggttttttca tcaattatat gtataactgg CD 1951 tctcagtacc gaggttacat agatcaatac tataataaga ttttcgttga CD 2001 aggtacaaga atacttgctt atgcttcatc cttctttgat agatggataa CD 2051 tagatggaat tgttaatggc actggcatct caagcttctc cggaggtgag CD 2101 ggaatgagat acggagaagg aggaagagta tcttcctatt tatttggatt CD 2151 agtttttggt atgactatct tgttagctgt aatactttta ataatataa FT EDITED CDNA CD 1 atgcaactta tatatcaatg tgcttggatt gtccctctgt gtccacttat CD 51 atcttctatt ctaataggat taggattacT tttttttgag aagtctacaa CD 101 aaagtattcg tcgtatatgt gctattagtt gtatctTatc attaagtgta CD 151 gctacagtca tttgctacaa tctctcctac gaacaaatca tagataattc CD 201 gatctatCaa tactcatggt caTggatctc aaatggagat atcgtttTgg CD 251 aattcggtta tttaattgat cCattaactt gtataatgtt ggtactagtt CD 301 actagtgtag ccattatagt tatgatttat agtgatggtt acatgtctca CD 351 cgatgaagga tatgttaggt ttTttgttta tcTtagtctt ttcactgcgt CD 401 ctatgttagg attagtactt agccctaatt taatacaaat ttatattttt CD 451 tgggaattag taggaatgtg ttcttattta ttaataggtt tttggtttac CD 501 tagacccagt gcagctaacg cctgtcaaaa agcttttatt actaatCgca CD 551 taggagattt tggattacta ttaggaattt Taggtttcta ttggataact CD 601 ggtagtttcg aatttgaaaa tttgtTtaaa ggatttaagg atttacttat CD 651 taataatgaa gttagtcCtt tctttgctat cttatgtgct tcctttctat CD 701 ttctaggtcc ggtagcaaaa tctgcacaat ttccactcca cgtatggttg CD 751 cctgatgcta tggaaggacc cacaCCCatt tcggctctga tccatgcagc CD 801 tactatggta gcagcaggaa tctatctcgt agctagaatg tttcCccttt CD 851 ttgaaacttt acctttcgtt aTgagtgtaa tttcctggac aggtgcagta CD 901 actgcttTat taggggctac tttagccttc tTtcaaaaag atcttaaaag CD 951 aggtttagct tatTCgacaa tgtctcaact aggttatatg atgttagctc CD 1001 Taggtatagg ttcctataga gctggtttgt TtcacCttat aacacatgct CD 1051 tattctaagg cttTattatt tctcggatca ggatcagtaa ttcatTctat CD 1101 ggaacctatt gttggatatC gtcccgacga aagtCaaaat atgattttta CD 1151 tgggtggatt gaggaagcat atgccaatta caggaacaac ttttTTgtta CD 1201 ggtacacTtt ctttatgtgg tattccacCt ttcgcttgtt tctggtccaa CD 1251 agatgagatt attgcggata gttggttaTa ctcccctttt attggatgga CD 1301 tagccttgct cacagcgggt ttaacttcct ttTacatgtt tcgcatctac CD 1351 tttttaacgt tcgaaggtga gtttagagct aattcttTta aagaaaatac CD 1401 tcctgtttct tctgtttctt tatggggaga attcagattt gaggaatttg CD 1451 gtgaaaaaaa agcagattct gtttTacaaa ttgtcgaaaa aagttctcca CD 1501 aaagagtttt ttcgattcgt acaaagtaat cgagaatcaa gtgaaacaca CD 1551 aataggaaat tatctatctg cttacccatc aaaagaacca atccattttt CD 1601 tatatcccaa agaatcagat tatactatgc taattccttt acttatatTa CD 1651 tcaataccca ctttacttat cggttttata ggagctcctc ttcctaatgg CD 1701 acaattaggt tccgatctat tatctcattg gttgaattca tttggaaatt CD 1751 tatctccgga aagattatct gaaaattggt tggaattcat tgaagacgca CD 1801 attacttcaa ttagtatagc ttcttttgga atattctccg ccttcatctt CD 1851 atatggaccg gcctctatct tccctagaga tttagaaaag aaaatagaac CD 1901 Ctcaactaaa aggtgtttgg ggttttttca tcaattatat gtataactgg CD 1951 tctcagtacc gaggttacat agatcaatac tataataaga ttttcgttga CD 2001 aggtacaaga atacttgctt atgcttcatc cttctttgat agatggataa CD 2051 tagatggaat tgttaatggc actggcatct caagcttctc cggaggtgag CD 2101 ggaatgagat acggagaagg aggaagagta tcttcctatt tatttggatt CD 2151 agtttttggt atgactatct tgttagctgt aatactttta ataatataa SQ SEQUENCE 733 AA; MQLIYQCAWI VPLCPLISSI LIGLGLLFFE KSTKSIRRIC AISCILSLSV ATVICYNLSY EQIIDNSIYQ YSWSWISNGD IVLEFGYLID PLTCIMLVLV TSVAIIVMIY SDGYMSHDEG YVRFFVYLSL FTASMLGLVL SPNLIQIYIF WELVGMCSYL LIGFWFTRPS AANACQKAFI TNRIGDFGLL LGILGFYWIT GSFEFENLFK GFKDLLINNE VSPFFAILCA SFLFLGPVAK SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGIYLVARM FPLFETLPFV MSVISWTGAV TALLGATLAF FQKDLKRGLA YSTMSQLGYM MLALGIGSYR AGLFHLITHA YSKALLFLGS GSVIHSMEPI VGYRPDESQN MIFMGGLRKH MPITGTTFLL GTLSLCGIPP FACFWSKDEI IADSWLYSPF IGWIALLTAG LTSFYMFRIY FLTFEGEFRA NSFKENTPVS SVSLWGEFRF EEFGEKKADS VLQIVEKSSP KEFFRFVQSN RESSETQIGN YLSAYPSKEP IHFLYPKESD YTMLIPLLIL SIPTLLIGFI GAPLPNGQLG SDLLSHWLNS FGNLSPERLS ENWLEFIEDA ITSISIASFG IFSAFILYGP ASIFPRDLEK KIEPQLKGVW GFFINYMYNW SQYRGYIDQY YNKIFVEGTR ILAYASSFFD RWIIDGIVNG TGISSFSGGE GMRYGEGGRV SSYLFGLVFG MTILLAVILL II* // ID AB086179_75 STANDARD; PRT; 119 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl21 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55397.1 FT PROTEIN_NAME : ribosomal protein L21 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 125882 - 126238 FT DIRECTIONS : positive FT EDITING : 15 *(Tga) -> R(Cga) FT EDITING : 53 L(tTg) -> S(tCg) FT EDITING : 60 L(CTc) -> S(TCc) FT EDITING : 61 R(Cgg) -> W(Tgg) FT EDITING : 92 *(Tga) -> R(Cga) FT EDITING : 103 *(Tga) -> R(Cga) FT EDITING : 104 S(tCt) -> F(tTt) FT EDITING : 108 P(Ccc) -> S(Tcc) FT EDITING : 109 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 atgaatacat atgcaataat tgataccgga ggtgagcaac tcTgagttga CD 51 accaggaaga ttttatgata tgcgtcactt tactttacta aatccgagta CD 101 ttttagattc aaatactaaa gtattaatct atcgagtatt aatgattcat CD 151 catgaatTga atatcgctct tggagatCTc Cggttagaag atgcaacaat CD 201 taaaggaaga gttttacatt ctcactttaa agacaaaatt acaatttaca CD 251 aaatgcgttc taagaaaaag atgTgacgta aattaggata tcgattaaat CD 301 ttagccTgat Ctgtggtgga tCccaCttgt ttcgatggaa aagaattcta CD 351 caaataa FT EDITED CDNA CD 1 atgaatacat atgcaataat tgataccgga ggtgagcaac tcCgagttga CD 51 accaggaaga ttttatgata tgcgtcactt tactttacta aatccgagta CD 101 ttttagattc aaatactaaa gtattaatct atcgagtatt aatgattcat CD 151 catgaatCga atatcgctct tggagatTCc Tggttagaag atgcaacaat CD 201 taaaggaaga gttttacatt ctcactttaa agacaaaatt acaatttaca CD 251 aaatgcgttc taagaaaaag atgCgacgta aattaggata tcgattaaat CD 301 ttagccCgat Ttgtggtgga tTccaTttgt ttcgatggaa aagaattcta CD 351 caaataa SQ SEQUENCE 119 AA; MNTYAIIDTG GEQLRVEPGR FYDMRHFTLL NPSILDSNTK VLIYRVLMIH HESNIALGDS WLEDATIKGR VLHSHFKDKI TIYKMRSKKK MRRKLGYRLN LARFVVDSIC FDGKEFYK* // ID AB086179_76 STANDARD; PRT; 70 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rpl32 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55398.1 FT PROTEIN_NAME : ribosomal protein L32 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 126400 - 126609 FT DIRECTIONS : positive FT EDITING : 34 L(Cta) -> L(Tta) FT EDITING : 57 F(tTc) -> S(tCc) FT CODON_START : 1 CL CDNALEN 210 NT; CD 1 atggcagttc cgaagaagcg tacttctaaa tcaaaaagaa agattcgtaa CD 51 aactgtgtgg agagaaaagg ctaataaggc cgcaaaaaaa gctttctccC CD 101 tagcacgttt aattttaagt ggtcgttcaa agagtttttg ttacacagta CD 151 aataataagt cttccgaatT ctctgaatct acatctattg atgaatcaga CD 201 tgattcatga FT EDITED CDNA CD 1 atggcagttc cgaagaagcg tacttctaaa tcaaaaagaa agattcgtaa CD 51 aactgtgtgg agagaaaagg ctaataaggc cgcaaaaaaa gctttctccT CD 101 tagcacgttt aattttaagt ggtcgttcaa agagtttttg ttacacagta CD 151 aataataagt cttccgaatC ctctgaatct acatctattg atgaatcaga CD 201 tgattcatga SQ SEQUENCE 70 AA; MAVPKKRTSK SKRKIRKTVW REKANKAAKK AFSLARLILS GRSKSFCYTV NNKSSESSES TSIDESDDS* // ID AB086179_77 STANDARD; PRT; 289 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ORF288 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55399.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 126778 - 127644 FT DIRECTIONS : positive FT EDITING : 9 P(cCa) -> L(cTa) FT EDITING : 21 *(Tga) -> R(Cga) FT EDITING : 48 S(tCa) -> L(tTa) FT EDITING : 71 P(Cca) -> S(Tca) FT EDITING : 82 S(tCa) -> L(tTa) FT EDITING : 86 T(aCa) -> I(aTa) FT EDITING : 103 S(tCt) -> F(tTt) FT EDITING : 116 L(cTt) -> P(cCt) FT EDITING : 128 S(tCa) -> L(tTa) FT EDITING : 176 S(tCg) -> L(tTg) FT EDITING : 230 S(tCa) -> L(tTa) FT EDITING : 245 P(cCc) -> L(cTc) FT EDITING : 274 P(cCt) -> L(cTt) FT EDITING : 280 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 867 NT; CD 1 atgagccaac ttatttttat tcctcCatta atttcacttt tagtaactaa CD 51 gggaaagatt Tgatttttga ataattttga atcagtctta gctttaagtt CD 101 tacactacgg tattctcgta ttagctttgc ctatatttat ttCattatac CD 151 aaagctaaga aacaaccttg cagtatcttg ttaaaagtaa ctacagaacc CD 201 aataatatta Ccagcttatg ctactacgtt ttccactgct ttttCagcaa CD 251 ttactaCaaa cgctttattt ggactaatca ttgcttggat tttggttaaa CD 301 tatgaatCta ctggaaaaga aactttagat gctatagttg accttcTttt CD 351 tgctcttccc gcttcagtag gaggcctcac ttCaatgact gtatatagtg CD 401 atagaggctg gatgggtcca atttgttctg gattaggttt aaaaatagtt CD 451 tttagtcgtc taggagttcc tatggctacg atcttcgtat cattaccttt CD 501 tgtagtacgt accatacaac cagtttCgca agatgtagaa gaagaattag CD 551 aagaagctgc ttggtgtata ggtgcatcac cttggacgac tttttgtcaa CD 601 atctcactcc cacttctaac tccttcatta ttaacaggaa cagctttagg CD 651 tttctcaaga gctatagggg aatatggttc aatagtttCa atagcatgta CD 701 atattcctat gaaagattta gtaatttccg tacCcatttt tcaaaaactt CD 751 gaacaatatg attatcaagg tgctattgtt gtagcaacca tagtattaat CD 801 agcttctttc ggtggattac Ctataattaa taaagttTaa ttatggaaac CD 851 aaaatttgag taaatga FT EDITED CDNA CD 1 atgagccaac ttatttttat tcctcTatta atttcacttt tagtaactaa CD 51 gggaaagatt Cgatttttga ataattttga atcagtctta gctttaagtt CD 101 tacactacgg tattctcgta ttagctttgc ctatatttat ttTattatac CD 151 aaagctaaga aacaaccttg cagtatcttg ttaaaagtaa ctacagaacc CD 201 aataatatta Tcagcttatg ctactacgtt ttccactgct ttttTagcaa CD 251 ttactaTaaa cgctttattt ggactaatca ttgcttggat tttggttaaa CD 301 tatgaatTta ctggaaaaga aactttagat gctatagttg accttcCttt CD 351 tgctcttccc gcttcagtag gaggcctcac ttTaatgact gtatatagtg CD 401 atagaggctg gatgggtcca atttgttctg gattaggttt aaaaatagtt CD 451 tttagtcgtc taggagttcc tatggctacg atcttcgtat cattaccttt CD 501 tgtagtacgt accatacaac cagtttTgca agatgtagaa gaagaattag CD 551 aagaagctgc ttggtgtata ggtgcatcac cttggacgac tttttgtcaa CD 601 atctcactcc cacttctaac tccttcatta ttaacaggaa cagctttagg CD 651 tttctcaaga gctatagggg aatatggttc aatagtttTa atagcatgta CD 701 atattcctat gaaagattta gtaatttccg tacTcatttt tcaaaaactt CD 751 gaacaatatg attatcaagg tgctattgtt gtagcaacca tagtattaat CD 801 agcttctttc ggtggattac Ttataattaa taaagttCaa ttatggaaac CD 851 aaaatttgag taaatga SQ SEQUENCE 289 AA; MSQLIFIPLL ISLLVTKGKI RFLNNFESVL ALSLHYGILV LALPIFILLY KAKKQPCSIL LKVTTEPIIL SAYATTFSTA FLAITINALF GLIIAWILVK YEFTGKETLD AIVDLPFALP ASVGGLTLMT VYSDRGWMGP ICSGLGLKIV FSRLGVPMAT IFVSLPFVVR TIQPVLQDVE EELEEAAWCI GASPWTTFCQ ISLPLLTPSL LTGTALGFSR AIGEYGSIVL IACNIPMKDL VISVLIFQKL EQYDYQGAIV VATIVLIASF GGLLIINKVQ LWKQNLSK* // ID AB086179_78 STANDARD; PRT; 340 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ccsA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55400.1 FT PROTEIN_NAME : putative cytochrome-c synthesis associated FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 128424 - 129443 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 14 P(Cct) -> S(Tct) FT EDITING : 60 R(Cgg) -> W(Tgg) FT EDITING : 63 P(Cct) -> S(Tct) FT EDITING : 131 S(tCa) -> L(tTa) FT EDITING : 161 S(tCa) -> L(tTa) FT EDITING : 238 *(Taa) -> Q(Caa) FT EDITING : 239 *(Tag) -> Q(Cag) FT EDITING : 253 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 1020 NT; CD 1 aCgatattaa taaatctaga acatatatta gctcatattC ctttctttct CD 51 tccttttctc gcaactttgg ttttttgggg aagaattgtt tgtatagaca CD 101 ataaaagaat aggttcttta ggtaataaaa gcataataat cgcttatatt CD 151 tgtataacgg ggcttctact gactcgcCgg ttccatCcta gacacttact CD 201 gctaagtaat ctatatgaat cttttatgtt tctttcatgg agtttttgtt CD 251 tgattcacat agtttcagaa atcggaagta aaaatgattg gttaggtatc CD 301 atcattgtac tgattgctat gttaacccat ggttttgcta ctgtgggtct CD 351 ccccatagag atgcaacaat ctacagtttt agtacctgcc tCacaatctc CD 401 attggttaat aatgcacgta agtatgatga tacctagtta tgccactctt CD 451 ccatgtggat ctttattagt aatagctttg tCaattacta cgttaaataa CD 501 aaataaaaat tttcctatat taaaatttaa cgtaaattca tttatttggt CD 551 ctctaatttt ggaaaagaaa ttttatttag gaggaagtgg tggagatata CD 601 agtagtagga atagcagtag tggtaatggg agtgataatg atagtaataa CD 651 taataataat aaaaagactt ttcattcgct atctatagat tgtcgtaaat CD 701 tgcaattaac tTaaTagttg gattattgga gttatcgaat tattagttta CD 751 ggttcttCgt ttttaactat aggtattctc tctggagcag tatgggttaa CD 801 tgaagcttgg ggatcttact ggagttggga tcctaaggaa acttgggctt CD 851 taattacttg gcttctatct gcaattcata tacatatcag aatgattagg CD 901 ggttggcagg gtgaaaaacc agcaattata gcgtcttcag gatcttctat CD 951 agtttggttt cgctacttag gagtcaactc ccctgaaaaa ggtttgcata CD 1001 gttatggctg gttaaattga FT EDITED CDNA CD 1 aTgatattaa taaatctaga acatatatta gctcatattT ctttctttct CD 51 tccttttctc gcaactttgg ttttttgggg aagaattgtt tgtatagaca CD 101 ataaaagaat aggttcttta ggtaataaaa gcataataat cgcttatatt CD 151 tgtataacgg ggcttctact gactcgcTgg ttccatTcta gacacttact CD 201 gctaagtaat ctatatgaat cttttatgtt tctttcatgg agtttttgtt CD 251 tgattcacat agtttcagaa atcggaagta aaaatgattg gttaggtatc CD 301 atcattgtac tgattgctat gttaacccat ggttttgcta ctgtgggtct CD 351 ccccatagag atgcaacaat ctacagtttt agtacctgcc tTacaatctc CD 401 attggttaat aatgcacgta agtatgatga tacctagtta tgccactctt CD 451 ccatgtggat ctttattagt aatagctttg tTaattacta cgttaaataa CD 501 aaataaaaat tttcctatat taaaatttaa cgtaaattca tttatttggt CD 551 ctctaatttt ggaaaagaaa ttttatttag gaggaagtgg tggagatata CD 601 agtagtagga atagcagtag tggtaatggg agtgataatg atagtaataa CD 651 taataataat aaaaagactt ttcattcgct atctatagat tgtcgtaaat CD 701 tgcaattaac tCaaCagttg gattattgga gttatcgaat tattagttta CD 751 ggttcttTgt ttttaactat aggtattctc tctggagcag tatgggttaa CD 801 tgaagcttgg ggatcttact ggagttggga tcctaaggaa acttgggctt CD 851 taattacttg gcttctatct gcaattcata tacatatcag aatgattagg CD 901 ggttggcagg gtgaaaaacc agcaattata gcgtcttcag gatcttctat CD 951 agtttggttt cgctacttag gagtcaactc ccctgaaaaa ggtttgcata CD 1001 gttatggctg gttaaattga SQ SEQUENCE 340 AA; MILINLEHIL AHISFFLPFL ATLVFWGRIV CIDNKRIGSL GNKSIIIAYI CITGLLLTRW FHSRHLLLSN LYESFMFLSW SFCLIHIVSE IGSKNDWLGI IIVLIAMLTH GFATVGLPIE MQQSTVLVPA LQSHWLIMHV SMMIPSYATL PCGSLLVIAL LITTLNKNKN FPILKFNVNS FIWSLILEKK FYLGGSGGDI SSRNSSSGNG SDNDSNNNNN KKTFHSLSID CRKLQLTQQL DYWSYRIISL GSLFLTIGIL SGAVWVNEAW GSYWSWDPKE TWALITWLLS AIHIHIRMIR GWQGEKPAII ASSGSSIVWF RYLGVNSPEK GLHSYGWLN* // ID AB086179_79 STANDARD; PRT; 502 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55401.2 FT PROTEIN_NAME : NADH dehydrogenase ND4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 129713 - 131218 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 12 P(cCt) -> L(cTt) FT EDITING : 20 S(tCa) -> L(tTa) FT EDITING : 33 *(Tga) -> R(Cga) FT EDITING : 46 P(cCa) -> L(cTa) FT EDITING : 49 H(Cat) -> Y(Tat) FT EDITING : 73 F(Ttc) -> L(Ctc) FT EDITING : 99 S(tCa) -> L(tTa) FT EDITING : 102 S(TCa) -> L(CTa) FT EDITING : 114 S(tCc) -> F(tTc) FT EDITING : 129 S(tCt) -> F(tTt) FT EDITING : 135 S(tCa) -> L(tTa) FT EDITING : 137 S(tCt) -> F(tTt) FT EDITING : 178 P(cCa) -> L(cTa) FT EDITING : 179 S(tCa) -> L(tTa) FT EDITING : 206 L(cTt) -> P(cCt) FT EDITING : 242 Y(Tat) -> H(Cat) FT EDITING : 261 S(tCa) -> L(tTa) FT EDITING : 273 Y(Tat) -> H(Cat) FT EDITING : 293 S(tCa) -> L(tTa) FT EDITING : 295 F(tTc) -> S(tCc) FT EDITING : 308 L(tTa) -> S(tCa) FT EDITING : 309 L(tTg) -> S(tCg) FT EDITING : 322 P(Cct) -> S(Tct) FT EDITING : 333 S(tCa) -> L(tTa) FT EDITING : 334 *(Taa) -> Q(Caa) FT EDITING : 345 P(cCc) -> L(cTc) FT EDITING : 348 P(Cca) -> S(Tca) FT EDITING : 375 S(tCt) -> F(tTt) FT EDITING : 402 S(tCa) -> L(tTa) FT EDITING : 439 *(Taa) -> Q(Caa) FT EDITING : 479 L(cTc) -> P(cCc) FT EDITING : 483 P(cCa) -> L(cTa) FT EDITING : 492 F(tTt) -> S(tCt) FT CODON_START : 1 CL CDNALEN 1506 NT; CD 1 aCgagcaact ttccctggct aactataatc gttcCtctac ctatatctgc CD 51 aggcttatCa atacctctac ttcctaataa aggtaataga attattTgat CD 101 ggtatacatt aggtatctgt ttggtagaat ttcttcCaat aactCatatt CD 151 ttttgcaact atttccactt cgacaatcaa tttattgaat taaaagaaga CD 201 ttataactgg ataaatTtcc tagattttca ttggagatta gggattgatg CD 251 gactgtccat tgggcttatt ttattaacag gatttataac tacttCagcc CD 301 accTCagcag cttggccaat tactcggaat cccagattat Cctatttttt CD 351 gatgttagcg atgtatagtg gtcaagtagg attatCtgct agtcaagaca CD 401 tttCactttC ttttttcatg tgggaactag aattaattcc agtttattta CD 451 cttctatcta tgtggggggg aaagagacgt ctatatgcag ctacgaagtt CD 501 cattttgtat accgcaggta gttctgtctt tcCatCaatg ggagctttaa CD 551 ctatgggact ttacggatct gacggtccta ccttagactt tgaaaattta CD 601 gctaatagat cttaccTtat aggattagaa ataattctgt atttaggctt CD 651 ttttatagct tacgcagtga aactacccat ggttccgtta catacttggt CD 701 taccggatac tcatggagaa gcgTattata gtacatgtat gcttttagcc CD 751 ggaattctac taaaaatggg tggatatgga tCaattcgaa ttaatatgga CD 801 attattatct cacgctTatt ctatatttgc tccatggtta gtagtaatag CD 851 gagctattca aattgtttat tcagcttCaa cttTccttag tcaacttaac CD 901 ttaaaaagaa gaattgctta ttTatTggtc tctcacatgg gttttgtact CD 951 tatcggaatt ggtCctacaa cagatatagg tgttaatgga gctatttCaT CD 1001 aaatgatttc tcatggatta atcggtgctg cacCcttctt tCcagcagga CD 1051 gtaacttacg atagaacacg tactcttttt cttaatcaaa tgggaggaat CD 1101 agctacttct ataccgaaaa tttCtacaat gttcagtagt ttttcaatgg CD 1151 cttctctagc attaccaggg ttaagtggtt tcgtagcaga attaatgatt CD 1201 ttttCaggaa tagttagtag tcaaaatttt tcctttcttt ttaaagtagt CD 1251 cattattatt gtagcagcta ctggaataat attaacccca atttatttgt CD 1301 tatcgatgtt acgaTaaatg ttttatggat atagaattat aaaaaattta CD 1351 acttcatatg ttacggatgc tggaccaaga gaaattttca tctttatttg CD 1401 tctattcttc cctattatag gcatcggttt ttatcTcaaa ttggttcCat CD 1451 ccctatcgaa tagtaaagtt gagtTtatta tatcaggaaa cttctcttct CD 1501 aaataa FT EDITED CDNA CD 1 aTgagcaact ttccctggct aactataatc gttcTtctac ctatatctgc CD 51 aggcttatTa atacctctac ttcctaataa aggtaataga attattCgat CD 101 ggtatacatt aggtatctgt ttggtagaat ttcttcTaat aactTatatt CD 151 ttttgcaact atttccactt cgacaatcaa tttattgaat taaaagaaga CD 201 ttataactgg ataaatCtcc tagattttca ttggagatta gggattgatg CD 251 gactgtccat tgggcttatt ttattaacag gatttataac tacttTagcc CD 301 accCTagcag cttggccaat tactcggaat cccagattat Tctatttttt CD 351 gatgttagcg atgtatagtg gtcaagtagg attatTtgct agtcaagaca CD 401 tttTactttT ttttttcatg tgggaactag aattaattcc agtttattta CD 451 cttctatcta tgtggggggg aaagagacgt ctatatgcag ctacgaagtt CD 501 cattttgtat accgcaggta gttctgtctt tcTatTaatg ggagctttaa CD 551 ctatgggact ttacggatct gacggtccta ccttagactt tgaaaattta CD 601 gctaatagat cttaccCtat aggattagaa ataattctgt atttaggctt CD 651 ttttatagct tacgcagtga aactacccat ggttccgtta catacttggt CD 701 taccggatac tcatggagaa gcgCattata gtacatgtat gcttttagcc CD 751 ggaattctac taaaaatggg tggatatgga tTaattcgaa ttaatatgga CD 801 attattatct cacgctCatt ctatatttgc tccatggtta gtagtaatag CD 851 gagctattca aattgtttat tcagcttTaa cttCccttag tcaacttaac CD 901 ttaaaaagaa gaattgctta ttCatCggtc tctcacatgg gttttgtact CD 951 tatcggaatt ggtTctacaa cagatatagg tgttaatgga gctatttTaC CD 1001 aaatgatttc tcatggatta atcggtgctg cacTcttctt tTcagcagga CD 1051 gtaacttacg atagaacacg tactcttttt cttaatcaaa tgggaggaat CD 1101 agctacttct ataccgaaaa tttTtacaat gttcagtagt ttttcaatgg CD 1151 cttctctagc attaccaggg ttaagtggtt tcgtagcaga attaatgatt CD 1201 ttttTaggaa tagttagtag tcaaaatttt tcctttcttt ttaaagtagt CD 1251 cattattatt gtagcagcta ctggaataat attaacccca atttatttgt CD 1301 tatcgatgtt acgaCaaatg ttttatggat atagaattat aaaaaattta CD 1351 acttcatatg ttacggatgc tggaccaaga gaaattttca tctttatttg CD 1401 tctattcttc cctattatag gcatcggttt ttatcCcaaa ttggttcTat CD 1451 ccctatcgaa tagtaaagtt gagtCtatta tatcaggaaa cttctcttct CD 1501 aaataa SQ SEQUENCE 502 AA; MSNFPWLTII VLLPISAGLL IPLLPNKGNR IIRWYTLGIC LVEFLLITYI FCNYFHFDNQ FIELKEDYNW INLLDFHWRL GIDGLSIGLI LLTGFITTLA TLAAWPITRN PRLFYFLMLA MYSGQVGLFA SQDILLFFFM WELELIPVYL LLSMWGGKRR LYAATKFILY TAGSSVFLLM GALTMGLYGS DGPTLDFENL ANRSYPIGLE IILYLGFFIA YAVKLPMVPL HTWLPDTHGE AHYSTCMLLA GILLKMGGYG LIRINMELLS HAHSIFAPWL VVIGAIQIVY SALTSLSQLN LKRRIAYSSV SHMGFVLIGI GSTTDIGVNG AILQMISHGL IGAALFFSAG VTYDRTRTLF LNQMGGIATS IPKIFTMFSS FSMASLALPG LSGFVAELMI FLGIVSSQNF SFLFKVVIII VAATGIILTP IYLLSMLRQM FYGYRIIKNL TSYVTDAGPR EIFIFICLFF PIIGIGFYPK LVLSLSNSKV ESIISGNFSS K* // ID AB086179_80 STANDARD; PRT; 82 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : psaC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55402.1 FT PROTEIN_NAME : photosystem I 9 kDa protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 131356 - 131601 FT DIRECTIONS : negative FT EDITING : 4 P(Ccc) -> S(Tcc) FT EDITING : 16 *(Taa) -> Q(Caa) FT EDITING : 22 L(cTt) -> P(cCt) FT EDITING : 26 S(tCa) -> L(tTa) FT EDITING : 38 *(Taa) -> Q(Caa) FT EDITING : 59 L(cTa) -> P(cCa) FT EDITING : 63 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 246 NT; CD 1 atggcacatC ccgtaaaaat ttatgataca tgtattggtt gcactTaatg CD 51 tgtaagggct tgtcTtacag atgtttCaga aatgataagc tgggatggat CD 101 gtaaggctaa tTaaatagct tctgctccta gaacagaaga ctgtgtaggt CD 151 tgcaaaagat gtgaatccgc ttgtcTaaca gatttttCga gtgtacgtgt CD 201 ttatctgggg tccgaaacga cacgtagtat gggtctagct tattaa FT EDITED CDNA CD 1 atggcacatT ccgtaaaaat ttatgataca tgtattggtt gcactCaatg CD 51 tgtaagggct tgtcCtacag atgtttTaga aatgataagc tgggatggat CD 101 gtaaggctaa tCaaatagct tctgctccta gaacagaaga ctgtgtaggt CD 151 tgcaaaagat gtgaatccgc ttgtcCaaca gatttttTga gtgtacgtgt CD 201 ttatctgggg tccgaaacga cacgtagtat gggtctagct tattaa SQ SEQUENCE 82 AA; MAHSVKIYDT CIGCTQCVRA CPTDVLEMIS WDGCKANQIA SAPRTEDCVG CKRCESACPT DFLSVRVYLG SETTRSMGLA Y* // ID AB086179_82 STANDARD; PRT; 201 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhG FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55404.1 FT PROTEIN_NAME : NADH dehydrogenase ND6 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 132390 - 132992 FT DIRECTIONS : negative FT EDITING : 14 S(tCt) -> F(tTt) FT EDITING : 15 L(Ctt) -> F(Ttt) FT EDITING : 32 P(cCt) -> L(cTt) FT EDITING : 81 A(gCt) -> V(gTt) FT EDITING : 113 P(cCa) -> L(cTa) FT EDITING : 114 S(tCa) -> L(tTa) FT EDITING : 161 P(cCt) -> L(cTt) FT EDITING : 162 P(cCt) -> L(cTt) FT EDITING : 166 P(cCt) -> L(cTt) FT EDITING : 173 V(gTt) -> A(gCt) FT CODON_START : 1 CL CDNALEN 603 NT; CD 1 gtgaacataa taaatctacc tgaactaaat tacgaagttt CtCttgtttt CD 51 tatagaatta ggtcttatat ttggaagttt aggagtagta tttcCtacta CD 101 atatagttta ttccgctttt ctattaggat tggttttcgt ttgcatatct CD 151 tttttatatc tcctactaga tgcggatttt gtagctactg cgcagatttt CD 201 gatctatgtg ggagccgtta atattttaat tgtatttgct gCtatgttaa CD 251 taaataaacc acaatctctt caatttttac catcttggac tgtaggagat CD 301 accattactt taatcctttg tacaagtctt tttttccCat Caatctccat CD 351 gattttgagt atatcatggt caaatatatt ttcgattgca caatcaaata CD 401 aaattggaga acaagtttta aaaagtagtg ttcaaggtat tgggtcttct CD 451 ttactaattg attttttact tccatttgaa cCtcCttcta tagttcCttt CD 501 agttgcttta ataggagTta ttactatagc tcgtagagag aagaaggtta CD 551 aactacagaa aaatcgaacg ttacaagtta ctaaagattc tttcatttta CD 601 tga FT EDITED CDNA CD 1 gtgaacataa taaatctacc tgaactaaat tacgaagttt TtTttgtttt CD 51 tatagaatta ggtcttatat ttggaagttt aggagtagta tttcTtacta CD 101 atatagttta ttccgctttt ctattaggat tggttttcgt ttgcatatct CD 151 tttttatatc tcctactaga tgcggatttt gtagctactg cgcagatttt CD 201 gatctatgtg ggagccgtta atattttaat tgtatttgct gTtatgttaa CD 251 taaataaacc acaatctctt caatttttac catcttggac tgtaggagat CD 301 accattactt taatcctttg tacaagtctt tttttccTat Taatctccat CD 351 gattttgagt atatcatggt caaatatatt ttcgattgca caatcaaata CD 401 aaattggaga acaagtttta aaaagtagtg ttcaaggtat tgggtcttct CD 451 ttactaattg attttttact tccatttgaa cTtcTttcta tagttcTttt CD 501 agttgcttta ataggagCta ttactatagc tcgtagagag aagaaggtta CD 551 aactacagaa aaatcgaacg ttacaagtta ctaaagattc tttcatttta CD 601 tga SQ SEQUENCE 201 AA; VNIINLPELN YEVFFVFIEL GLIFGSLGVV FLTNIVYSAF LLGLVFVCIS FLYLLLDADF VATAQILIYV GAVNILIVFA VMLINKPQSL QFLPSWTVGD TITLILCTSL FFLLISMILS ISWSNIFSIA QSNKIGEQVL KSSVQGIGSS LLIDFLLPFE LLSIVLLVAL IGAITIARRE KKVKLQKNRT LQVTKDSFIL * // ID AB086179_83 STANDARD; PRT; 184 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55405.1 FT PROTEIN_NAME : NADH dehydrogenase 18 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 133113 - 133664 FT DIRECTIONS : negative FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 52 *(Tga) -> R(Cga) FT EDITING : 132 C(Tgt) -> R(Cgt) FT EDITING : 135 S(tCg) -> L(tTg) FT EDITING : 139 *(Tag) -> Q(Cag) FT EDITING : 142 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 552 NT; CD 1 atgttttcta tggtgaatgg atttcggaat tatagtcaac aagcgataca CD 51 ggcctcgaga tacatcggtc agggttttat tgtcacctCa gatcacatga CD 101 atcgtttacc gatgacgatt caataccctt acgagaaatt agttccatca CD 151 gaaTgatttc gtggacgtat tcactttgaa tttgataaat gtatagcttg CD 201 tgaggtatgt gtccgtgtat gtccaatcaa tttacctgta gttgattgga CD 251 aattcaagaa agatataaag aagaaacaat taaaaagtta tagtattgat CD 301 tttggagttt gtatcttttg tggaaattgc gttgaatatt gtcccacgaa CD 351 ctgtttgtcg atgactgagg aatatgaact ttcaacctat gatTgtcatg CD 401 aatCgaatta tgacTagatt gcttCaggac gtttacctat atctataatt CD 451 gaagatcgta caattgaaag tatttcaagt ttcgattttt catccaaaaa CD 501 aattatggaa gaacattcta aatcaagaac tgttactaaa tttttagatt CD 551 ga FT EDITED CDNA CD 1 atgttttcta tggtgaatgg atttcggaat tatagtcaac aagcgataca CD 51 ggcctcgaga tacatcggtc agggttttat tgtcacctTa gatcacatga CD 101 atcgtttacc gatgacgatt caataccctt acgagaaatt agttccatca CD 151 gaaCgatttc gtggacgtat tcactttgaa tttgataaat gtatagcttg CD 201 tgaggtatgt gtccgtgtat gtccaatcaa tttacctgta gttgattgga CD 251 aattcaagaa agatataaag aagaaacaat taaaaagtta tagtattgat CD 301 tttggagttt gtatcttttg tggaaattgc gttgaatatt gtcccacgaa CD 351 ctgtttgtcg atgactgagg aatatgaact ttcaacctat gatCgtcatg CD 401 aatTgaatta tgacCagatt gcttTaggac gtttacctat atctataatt CD 451 gaagatcgta caattgaaag tatttcaagt ttcgattttt catccaaaaa CD 501 aattatggaa gaacattcta aatcaagaac tgttactaaa tttttagatt CD 551 ga SQ SEQUENCE 184 AA; MFSMVNGFRN YSQQAIQASR YIGQGFIVTL DHMNRLPMTI QYPYEKLVPS ERFRGRIHFE FDKCIACEVC VRVCPINLPV VDWKFKKDIK KKQLKSYSID FGVCIFCGNC VEYCPTNCLS MTEEYELSTY DRHELNYDQI ALGRLPISII EDRTIESISS FDFSSKKIME EHSKSRTVTK FLD* // ID AB086179_84 STANDARD; PRT; 367 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55406.1 FT PROTEIN_NAME : NADH dehydrogenase ND1 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 186/1 FT EDITING : 35 P(cCc) -> L(cTc) FT EDITING : 89 T(aCt) -> I(aTt) FT EDITING : 103 L(cTa) -> P(cCa) FT EDITING : 147 S(tCt) -> F(tTt) FT EDITING : 159 S(tCt) -> F(tTt) FT EDITING : 160 S(tCa) -> L(tTa) FT EDITING : 167 V(gTt) -> A(gCt) FT EDITING : 168 *(Taa) -> Q(Caa) FT EDITING : 175 S(Tct) -> P(Cct) FT EDITING : 182 L(CTt) -> S(TCt) FT EDITING : 185 L(Tta) -> L(Cta) FT EDITING : 213 L(cTt) -> P(cCt) FT EDITING : 231 S(Tct) -> P(Cct) FT EDITING : 241 S(tCa) -> L(tTa) FT EDITING : 321 S(tCc) -> F(tTc) FT EDITING : 356 S(tCa) -> L(tTa) FT EDITING : 357 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1101 NT; CD 1 atggtgttca atatgaatct taaagagcaa gccatgagtt tgttctatga CD 51 atcaggattt ccaaaagatt tttttagttt cttatggatt acagcttcta CD 101 ttcCcattct tgtatcagga gttgtaatag gagtattagt cattgtatgg CD 151 cttgaaagaa aaatatctgc aggaatacaa caacgtattg gacctgaata CD 201 tgcaggtcct ctaggaataa ttcaagcttt agcagatgga acgaaactat CD 251 tactaaaaga ggataCtatt ccatctagag gagatgcttt gctatttagt CD 301 attggacTag ctatcgtagt catacctgtt ctcctaagtt acttagtaat CD 351 tccttttggc cataacatta ttttggctga tcttaatata ggtgtatttt CD 401 tttggattgc tgtttccagt atcgctcctc tgggactctC tatggcaggg CD 451 tatggatcaa ataataaata ttcttCttCa ggtggtcttc gagctgtggT CD 501 tTaagctatt agttatgaaa ttTctttagc tttatgtgtg ttaCTtatat CD 551 ctTtactatc taacagttta agtacagttg atatagttga aatacagtcc CD 601 aaatttggtt tttggggttg gaatgtctgg cgccaacTta taggttttat CD 651 agcttttctc attgcctcat tagctgaatg tgagagattg Tctttcgatt CD 701 taccagaagc agaagaggaa tCagttgcag gctatcaaac tgagtattca CD 751 ggtattaaat ttggtttatt ctatgttgct tcttacctaa acttattagt CD 801 atcctcactg tttgtaacag ttctttattt gggtggatgg aacttgtcca CD 851 ttccatttct accaaatttc ccttatttag aatggaaatt tactgctgag CD 901 actagtgagg ttatcaatgt aattataggg attattatta cattagctaa CD 951 agcctattca tCcttattca tttccattgt gacgagatgg accttaccca CD 1001 gagtaagaat ggatcaatta ttaaatcttg gttggaaatt tcttctgcct CD 1051 attgctctag gtaattCatC attgacagct tcttttcaac ttatcgcgta CD 1101 a FT EDITED CDNA CD 1 atggtgttca atatgaatct taaagagcaa gccatgagtt tgttctatga CD 51 atcaggattt ccaaaagatt tttttagttt cttatggatt acagcttcta CD 101 ttcTcattct tgtatcagga gttgtaatag gagtattagt cattgtatgg CD 151 cttgaaagaa aaatatctgc aggaatacaa caacgtattg gacctgaata CD 201 tgcaggtcct ctaggaataa ttcaagcttt agcagatgga acgaaactat CD 251 tactaaaaga ggataTtatt ccatctagag gagatgcttt gctatttagt CD 301 attggacCag ctatcgtagt catacctgtt ctcctaagtt acttagtaat CD 351 tccttttggc cataacatta ttttggctga tcttaatata ggtgtatttt CD 401 tttggattgc tgtttccagt atcgctcctc tgggactctT tatggcaggg CD 451 tatggatcaa ataataaata ttcttTttTa ggtggtcttc gagctgtggC CD 501 tCaagctatt agttatgaaa ttCctttagc tttatgtgtg ttaTCtatat CD 551 ctCtactatc taacagttta agtacagttg atatagttga aatacagtcc CD 601 aaatttggtt tttggggttg gaatgtctgg cgccaacCta taggttttat CD 651 agcttttctc attgcctcat tagctgaatg tgagagattg Cctttcgatt CD 701 taccagaagc agaagaggaa tTagttgcag gctatcaaac tgagtattca CD 751 ggtattaaat ttggtttatt ctatgttgct tcttacctaa acttattagt CD 801 atcctcactg tttgtaacag ttctttattt gggtggatgg aacttgtcca CD 851 ttccatttct accaaatttc ccttatttag aatggaaatt tactgctgag CD 901 actagtgagg ttatcaatgt aattataggg attattatta cattagctaa CD 951 agcctattca tTcttattca tttccattgt gacgagatgg accttaccca CD 1001 gagtaagaat ggatcaatta ttaaatcttg gttggaaatt tcttctgcct CD 1051 attgctctag gtaattTatT attgacagct tcttttcaac ttatcgcgta CD 1101 a SQ SEQUENCE 367 AA; MVFNMNLKEQ AMSLFYESGF PKDFFSFLWI TASILILVSG VVIGVLVIVW LERKISAGIQ QRIGPEYAGP LGIIQALADG TKLLLKEDII PSRGDALLFS IGPAIVVIPV LLSYLVIPFG HNIILADLNI GVFFWIAVSS IAPLGLFMAG YGSNNKYSFL GGLRAVAQAI SYEIPLALCV LSISLLSNSL STVDIVEIQS KFGFWGWNVW RQPIGFIAFL IASLAECERL PFDLPEAEEE LVAGYQTEYS GIKFGLFYVA SYLNLLVSSL FVTVLYLGGW NLSIPFLPNF PYLEWKFTAE TSEVINVIIG IIITLAKAYS FLFISIVTRW TLPRVRMDQL LNLGWKFLLP IALGNLLLTA SFQLIA* // ID AB086179_85 STANDARD; PRT; 394 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhH FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55407.2 FT PROTEIN_NAME : NADH dehydrogenase 49 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 135734 - 136915 FT DIRECTIONS : negative FT EDITING : 32 P(cCa) -> L(cTa) FT EDITING : 42 L(cTt) -> P(cCt) FT EDITING : 75 I(aTc) -> T(aCc) FT EDITING : 110 C(Tgc) -> R(Cgc) FT EDITING : 128 *(Taa) -> Q(Caa) FT EDITING : 130 L(cTt) -> P(cCt) FT EDITING : 147 V(gTt) -> A(gCt) FT EDITING : 157 S(tCt) -> F(tTt) FT EDITING : 167 L(Ctg) -> L(Ttg) FT EDITING : 168 L(cTt) -> P(cCt) FT EDITING : 169 H(Cat) -> Y(Tat) FT EDITING : 182 S(tCt) -> F(tTt) FT EDITING : 202 *(Tga) -> R(Cga) FT EDITING : 209 T(aCt) -> I(aTt) FT EDITING : 215 T(aCa) -> I(aTa) FT EDITING : 230 *(Taa) -> Q(Caa) FT EDITING : 234 C(Tgt) -> R(Cgt) FT EDITING : 260 C(Tgt) -> R(Cgt) FT EDITING : 290 S(tCa) -> L(tTa) FT EDITING : 293 *(Tga) -> R(Cga) FT EDITING : 295 L(ctC) -> L(ctT) FT EDITING : 341 P(cCa) -> L(cTa) FT EDITING : 349 L(cTt) -> P(cCt) FT EDITING : 393 C(Tgt) -> R(Cgt) FT CODON_START : 1 CL CDNALEN 1182 NT; CD 1 atgaccatgc ttgctgcaaa ggcagatcct atgacactta gtatgggtcc CD 51 tcatcaccca tcaatgcatg gtgttcttcg acttatagtt actcCagatg CD 101 gtgaaaatgt tactgattgt gaacTtatat taggttattt gcatagagga CD 151 atggaaaaaa ttgctgaaaa tagaacaatt gttcaatatc ttccttatgt CD 201 aacacggtgg gattatttag ctaTcatgtt tacggaggca ataacggtaa CD 251 atgcgccgga aaagttgacg aatattcaag tacctaagag agctagctat CD 301 ataagaataa ttatgctaga gttaagtTgc atagcttctc atttgttgtg CD 351 gctcggacct ttcatggctg atatcggtgc aTaaacacTt ttcttttata CD 401 ttcttagaga aagagaaatg atatatgatt tatttgaggT tgctactggg CD 451 atgagaatga tgcataattC ttttcgtatt ggaggagtag ctgtagatCt CD 501 gcTtCatggt tgggtagata aatgtttgga tttctgtgac tattCttcac CD 551 taaaggtaga tgaatatgaa agacttatta catataattc gatatttctg CD 601 aaaTgagtag agggagtagg tactaCtagt agagaagaag ctaCaaattg CD 651 gggtttatca ggacttatgt tacgagcttc aggggttTaa tgggatcttT CD 701 gtaaagtaga tcattacgaa tgttatgatg aattagactg gcaagttcaa CD 751 agtcagacag aaggagattc attagctTgt tatttagtga gaattgggga CD 801 aatgagagaa tctgtcaaga ttattcagca agctttaaaa gtaattccgg CD 851 gaggacctta tgaaaattCa gaagctTgac gactCaatca aggaaaagac CD 901 tcggaatgga atgattttga atatcaattt attagtaaaa agccttctcc CD 951 tacttttaaa ttaccaaaac aggagcatta tataagagta gaagctccta CD 1001 aaggagaatt aggtatttat cCaattggag atgatagcgt ttttcTttgg CD 1051 agatggaaga ttcgtccacc tggttttatc aatctgcaaa ttcttcctca CD 1101 attagttaaa ggaatgaaat tggcagatat catgacaatt ttaggtagta CD 1151 tagatattat tatgggagag gttgatTgtt aa FT EDITED CDNA CD 1 atgaccatgc ttgctgcaaa ggcagatcct atgacactta gtatgggtcc CD 51 tcatcaccca tcaatgcatg gtgttcttcg acttatagtt actcTagatg CD 101 gtgaaaatgt tactgattgt gaacCtatat taggttattt gcatagagga CD 151 atggaaaaaa ttgctgaaaa tagaacaatt gttcaatatc ttccttatgt CD 201 aacacggtgg gattatttag ctaCcatgtt tacggaggca ataacggtaa CD 251 atgcgccgga aaagttgacg aatattcaag tacctaagag agctagctat CD 301 ataagaataa ttatgctaga gttaagtCgc atagcttctc atttgttgtg CD 351 gctcggacct ttcatggctg atatcggtgc aCaaacacCt ttcttttata CD 401 ttcttagaga aagagaaatg atatatgatt tatttgaggC tgctactggg CD 451 atgagaatga tgcataattT ttttcgtatt ggaggagtag ctgtagatTt CD 501 gcCtTatggt tgggtagata aatgtttgga tttctgtgac tattTttcac CD 551 taaaggtaga tgaatatgaa agacttatta catataattc gatatttctg CD 601 aaaCgagtag agggagtagg tactaTtagt agagaagaag ctaTaaattg CD 651 gggtttatca ggacttatgt tacgagcttc aggggttCaa tgggatcttC CD 701 gtaaagtaga tcattacgaa tgttatgatg aattagactg gcaagttcaa CD 751 agtcagacag aaggagattc attagctCgt tatttagtga gaattgggga CD 801 aatgagagaa tctgtcaaga ttattcagca agctttaaaa gtaattccgg CD 851 gaggacctta tgaaaattTa gaagctCgac gactTaatca aggaaaagac CD 901 tcggaatgga atgattttga atatcaattt attagtaaaa agccttctcc CD 951 tacttttaaa ttaccaaaac aggagcatta tataagagta gaagctccta CD 1001 aaggagaatt aggtatttat cTaattggag atgatagcgt ttttcCttgg CD 1051 agatggaaga ttcgtccacc tggttttatc aatctgcaaa ttcttcctca CD 1101 attagttaaa ggaatgaaat tggcagatat catgacaatt ttaggtagta CD 1151 tagatattat tatgggagag gttgatCgtt aa SQ SEQUENCE 394 AA; MTMLAAKADP MTLSMGPHHP SMHGVLRLIV TLDGENVTDC EPILGYLHRG MEKIAENRTI VQYLPYVTRW DYLATMFTEA ITVNAPEKLT NIQVPKRASY IRIIMLELSR IASHLLWLGP FMADIGAQTP FFYILREREM IYDLFEAATG MRMMHNFFRI GGVAVDLPYG WVDKCLDFCD YFSLKVDEYE RLITYNSIFL KRVEGVGTIS REEAINWGLS GLMLRASGVQ WDLRKVDHYE CYDELDWQVQ SQTEGDSLAR YLVRIGEMRE SVKIIQQALK VIPGGPYENL EARRLNQGKD SEWNDFEYQF ISKKPSPTFK LPKQEHYIRV EAPKGELGIY LIGDDSVFPW RWKIRPPGFI NLQILPQLVK GMKLADIMTI LGSIDIIMGE VDR* // ID AB086179_87 STANDARD; PRT; 474 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ORF473 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55408.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 137666 - 139087 FT DIRECTIONS : negative FT EDITING : 129 P(cCt) -> L(cTt) FT EDITING : 239 *(Tga) -> R(Cga) FT EDITING : 275 *(Taa) -> Q(Caa) FT EDITING : 389 S(tCa) -> L(tTa) FT EDITING : 440 *(Tga) -> R(Cga) FT EDITING : 459 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 1422 NT; CD 1 atgaataaat gttatctcaa atatttatta caatcttgga ccccccgtta CD 51 ttctattaga agtaatacta gaaatttttt acaagagata cttagtttca CD 101 acgaaccaca aaatttgaca gaaagtaact ggaaacgatg gttacaatgt CD 151 ttcaatcgat ataatttacc tttacaaatg tggtataaaa tatcaccaca CD 201 gcaatggaaa agtcaggtta gtaaacactg gaaagataga aatcattttt CD 251 ctaaaaattc tcatcggaaa aaccagagtt tacttcttta taaacaaaag CD 301 gaattttatt ctatatttgc ttcagattct tcttcaagat acactagaga CD 351 gattgagaga cttaataaac gttatagatg taaccCtttt ctttatagct CD 401 atctcgatca tacaaaaagt ttaaacatga gaagatttcc tgtgtggcga CD 451 agtgaagaaa gagaaactat attgaataat cgtattaaag aaatacgtaa CD 501 ttttcattta ttcaataatg aaaggaataa cgaaaattct attaattctt CD 551 taggaaaaga aaaaaatctt ttttttagat ctaatttagt tttgtggtta CD 601 gttccagaat ttctaggaaa gaagaatata cacaaaacag aattcatacc CD 651 agttttttat ccttctttag tcagggagag aggtgaaaaa actattcaaa CD 701 atagaaaatc acttTgagaa agggaacgtc atgaatctat tcgtcaatgg CD 751 agatgggaat ctaaagattt agaagaaaga ttcaaagaat tgggagatat CD 801 ggcttctgtt atgactttta ttTaaaataa gaaaaatatt atttcacttt CD 851 ctgttaagat gcgtgaagat ttagatctat ttcgtctcct ctttcgtaga CD 901 gatataggtt taaatagatt aacaattaat tcggaacatc gtttaccgcg CD 951 agtattagat gatgaaatct taatgtgtaa aatcataact actctactaa CD 1001 agtttaaatc tagatttcaa gaaagattag atttcaatat ttttgatgaa CD 1051 tctatatcac ggatacgaaa atttgaaagt gaaaggaaaa ccatttccaa CD 1101 gtcgttcagt cttgaagaaa tattgcttcc gaagcgttgt aaagaattaa CD 1151 gaatattaaa ttcttCatat tcaaagtatg atatcaatga agaagcgaaa CD 1201 tttgatgaag ggtctttagg aaaaaatagg gggagtaacg agaagttggt CD 1251 aaggataaat gaggaattta atacaaatgt aaatcaaagt attaaacgtt CD 1301 ttctctggcc tagttatTga ttggaagatc tagcttgcat gaatagattt CD 1351 tggtttaata ctagtaatgg aagtTgattc tccatgctaa gaattcgtct CD 1401 ctatcttcta attcatgatt aa FT EDITED CDNA CD 1 atgaataaat gttatctcaa atatttatta caatcttgga ccccccgtta CD 51 ttctattaga agtaatacta gaaatttttt acaagagata cttagtttca CD 101 acgaaccaca aaatttgaca gaaagtaact ggaaacgatg gttacaatgt CD 151 ttcaatcgat ataatttacc tttacaaatg tggtataaaa tatcaccaca CD 201 gcaatggaaa agtcaggtta gtaaacactg gaaagataga aatcattttt CD 251 ctaaaaattc tcatcggaaa aaccagagtt tacttcttta taaacaaaag CD 301 gaattttatt ctatatttgc ttcagattct tcttcaagat acactagaga CD 351 gattgagaga cttaataaac gttatagatg taaccTtttt ctttatagct CD 401 atctcgatca tacaaaaagt ttaaacatga gaagatttcc tgtgtggcga CD 451 agtgaagaaa gagaaactat attgaataat cgtattaaag aaatacgtaa CD 501 ttttcattta ttcaataatg aaaggaataa cgaaaattct attaattctt CD 551 taggaaaaga aaaaaatctt ttttttagat ctaatttagt tttgtggtta CD 601 gttccagaat ttctaggaaa gaagaatata cacaaaacag aattcatacc CD 651 agttttttat ccttctttag tcagggagag aggtgaaaaa actattcaaa CD 701 atagaaaatc acttCgagaa agggaacgtc atgaatctat tcgtcaatgg CD 751 agatgggaat ctaaagattt agaagaaaga ttcaaagaat tgggagatat CD 801 ggcttctgtt atgactttta ttCaaaataa gaaaaatatt atttcacttt CD 851 ctgttaagat gcgtgaagat ttagatctat ttcgtctcct ctttcgtaga CD 901 gatataggtt taaatagatt aacaattaat tcggaacatc gtttaccgcg CD 951 agtattagat gatgaaatct taatgtgtaa aatcataact actctactaa CD 1001 agtttaaatc tagatttcaa gaaagattag atttcaatat ttttgatgaa CD 1051 tctatatcac ggatacgaaa atttgaaagt gaaaggaaaa ccatttccaa CD 1101 gtcgttcagt cttgaagaaa tattgcttcc gaagcgttgt aaagaattaa CD 1151 gaatattaaa ttcttTatat tcaaagtatg atatcaatga agaagcgaaa CD 1201 tttgatgaag ggtctttagg aaaaaatagg gggagtaacg agaagttggt CD 1251 aaggataaat gaggaattta atacaaatgt aaatcaaagt attaaacgtt CD 1301 ttctctggcc tagttatCga ttggaagatc tagcttgcat gaatagattt CD 1351 tggtttaata ctagtaatgg aagtCgattc tccatgctaa gaattcgtct CD 1401 ctatcttcta attcatgatt aa SQ SEQUENCE 474 AA; MNKCYLKYLL QSWTPRYSIR SNTRNFLQEI LSFNEPQNLT ESNWKRWLQC FNRYNLPLQM WYKISPQQWK SQVSKHWKDR NHFSKNSHRK NQSLLLYKQK EFYSIFASDS SSRYTREIER LNKRYRCNLF LYSYLDHTKS LNMRRFPVWR SEERETILNN RIKEIRNFHL FNNERNNENS INSLGKEKNL FFRSNLVLWL VPEFLGKKNI HKTEFIPVFY PSLVRERGEK TIQNRKSLRE RERHESIRQW RWESKDLEER FKELGDMASV MTFIQNKKNI ISLSVKMRED LDLFRLLFRR DIGLNRLTIN SEHRLPRVLD DEILMCKIIT TLLKFKSRFQ ERLDFNIFDE SISRIRKFES ERKTISKSFS LEEILLPKRC KELRILNSLY SKYDINEEAK FDEGSLGKNR GSNEKLVRIN EEFNTNVNQS IKRFLWPSYR LEDLACMNRF WFNTSNGSRF SMLRIRLYLL IHD* // ID AB086179_88 STANDARD; PRT; 1032 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ORF1031 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55409.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 139569 - 142664 FT DIRECTIONS : negative FT EDITING : 26 P(cCg) -> L(cTg) FT EDITING : 36 P(Ccc) -> S(Tcc) FT EDITING : 71 *(Taa) -> Q(Caa) FT EDITING : 75 L(ctT) -> L(ctC) FT EDITING : 103 S(tCt) -> F(tTt) FT EDITING : 130 *(Taa) -> Q(Caa) FT EDITING : 168 S(tCt) -> F(tTt) FT EDITING : 218 S(tCt) -> F(tTt) FT EDITING : 348 *(Taa) -> Q(Caa) FT EDITING : 408 *(Taa) -> Q(Caa) FT EDITING : 470 P(cCt) -> L(cTt) FT EDITING : 537 *(Tga) -> R(Cga) FT EDITING : 566 S(tCt) -> F(tTt) FT EDITING : 618 C(Tgt) -> R(Cgt) FT EDITING : 672 L(Ctt) -> F(Ttt) FT EDITING : 680 L(Tta) -> L(Cta) FT EDITING : 813 *(Taa) -> Q(Caa) FT EDITING : 819 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 3096 NT; CD 1 atgataacaa gcattacctt actgttttct atattatggg ctcaaatatt CD 51 atcatggata agtatatcgg gtcctcCgat tttatttgga ctatattacg CD 101 gatttCccat aacattacct atgggccctt ctcagatttt atctatcaga CD 151 gcttttttat tagaaggaaa tcttagtggt ttaatggcct tgggtggttc CD 201 gactctagga Taattaataa tactTatatc aatattctat tcgcctcttt CD 251 atataatgct actaaaacct catgcaataa ctttaattac tttaccatat CD 301 gttttatCtt attggtacga aataaaagat ctttcagatt atcaaccttt CD 351 acgccctata acatcactta atgatactgg aattattTaa atatttctga CD 401 atagttttct ctttcaaata tttaatccca ttcttttacc aagtcccgtg CD 451 ttaacaagat tagtaaaact ttttttattt cgttatagcc ataattcatt CD 501 ctCtgttata agtctcttct gtggttggtt gggtggtaat attttgctta CD 551 taaatttaag taagtttctt ctaattcgta taaaaaataa ttcatctaca CD 601 ctttatctct tagtcaaacg tcttatttat cgaactttta gtattattat CD 651 ttCtgttgct tgtttatcat acttaggtaa atttccagta cctttctcta CD 701 tgaaaaaatc aagtgatgaa tcttcattaa atgaatggaa agctgagaga CD 751 ttatcatggt tatataaacc atggcctact tctctcttta attatcgtaa CD 801 atggaatcga ccgttacgat atattgaaaa tagtcggttt agtaataaga CD 851 gtcccgtaaa aagaaatgta tctcaatatt tttttgatgt atgtttgaat CD 901 gatgggagac aaagaatatc tttcacatct ttacctagtt tttcaatttt CD 951 tgaaaaaaat ttgaaaaact acttaaacgt ttcgagaatt tcctcctcat CD 1001 ctgatgtttt ttatcaggag tggattaata cgaagaaaga aTaaaaagat CD 1051 gatttgtata gcgaagtaga agaaagaatt aaagctttag acaatggatt CD 1101 ttctttagag catgctatag aaaaaagaat aggattttct agtattaata CD 1151 aagaagatat tcctaataaa acttatgatc cttttttaga tggagaattc CD 1201 cgcggaaaag ttgcagtatc aTaatcacct ttacttctga cggggaagtc CD 1251 ctacgggtta accaagacac aaaagttact ccatttatcg aggaagaata CD 1301 ataaattaaa attttggatt tctaataaat ggcgaaagtt ggaacgtaag CD 1351 gatctaccat tgccttggga accactaacc caagatgctc gtcgagtttt CD 1401 gattttacCt attaaaggat tgaggaataa gaaatctaag atagactcac CD 1451 agagaaatga tttttcaaaa gaacaaggag taatagctct aaatgaagaa CD 1501 aatatttctc ccgaattctc agcaaagact aacaatacaa actttttacg CD 1551 agaaaaagca attcgaaaat cacatattaa ttgggaactt gttttaaatc CD 1601 tctctctcTg acaaagaatt ttatacttta attatttgga gaaggttaaa CD 1651 tgggagacga ttaaaaattc ttggaaagat ttaatatcgg gtaactCtac CD 1701 tgaagtcaaa aatattggtt ctttagtgat gaaaataatg aaaatccatc CD 1751 aggaatctcc acttcaagaa tttcataaag aggtacctcg ctggacttcg CD 1801 aaactgaaaa atgataaatt tgatgttata gctattggag ttactgatat CD 1851 tTgtcaaaga aaagtaagaa atttaggtta tcttattaag gggagagaaa CD 1901 agagaagaaa gattgtaaga cgtttttcac aacaatcaga ttttcgtcgg CD 1951 aaactcataa agggatctat gcgtgctaga agacgcaaaa ctttgatatg CD 2001 gaaaatttta caaCttaaaa cacattctcc tttttttTta aaaataacgg CD 2051 aaaaacccgc tttgtttcga tctacggaaa ttatggaaga tatagatgta CD 2101 aaagggactt ttctaaatac tataggaatt gaaaaattaa tatctttgtt CD 2151 aagtgagaga ggagttgcta tcaaaggaac aaaagccgat cgccttgcaa CD 2201 tagcaaatag atgggatttt ccattagctc aatggggaag aagttggtta CD 2251 ttaattattc aatcgtatct taggaaatat gtggtactac ctatattaat CD 2301 aatactaaaa aatattagtc gtttatttct attacaagtt cctgaatgga CD 2351 atgaagattg gaatgaatgg agtgaggaga ttcatataaa atgcacttat CD 2401 gatgggactg aagtttcaga aagggaatta ccagaaTaat ggcttaggga CD 2451 tggtcCtcag ataaaaataa tttatccttt tcatttaaaa ccttggcata CD 2501 attctaagtt caaagaaaag gggaatagaa atatggaacc taattttcct CD 2551 catactcaga acaaaggaaa agaaacatca gataataaag catatagatt CD 2601 acaaaaaaac aagaaattta aatatagttt tttaacagct tggggatttc CD 2651 aaactaactt accttttggt aatataaaga aacaaccttc tttttggaaa CD 2701 ccagttatta aagaattgaa aaagagatgg aaaagagaga ttctctcaaa CD 2751 aactgctaat ttttatgaac tttattacaa tatatcgcta ctatacagaa CD 2801 aatccgatat ttctaataga tttaaaattt ttgcagaatt tgatattcaa CD 2851 acagatgaac gtatgaatca tgaaatatct aaaattcaag tcaatagtga CD 2901 atccggtgga gctagtgtta cggatgatgg aattaaaaga gaatcacctc CD 2951 taggtattac tcttaattct gaaaattcaa atttcagtga aaatgaagat CD 3001 tttctgtggg aaattccagt tgaatctaga tataaaactg cgaaaaacat CD 3051 taagaaatta gaaagtttag tcgtatctaa gaataatcta acttga FT EDITED CDNA CD 1 atgataacaa gcattacctt actgttttct atattatggg ctcaaatatt CD 51 atcatggata agtatatcgg gtcctcTgat tttatttgga ctatattacg CD 101 gatttTccat aacattacct atgggccctt ctcagatttt atctatcaga CD 151 gcttttttat tagaaggaaa tcttagtggt ttaatggcct tgggtggttc CD 201 gactctagga Caattaataa tactCatatc aatattctat tcgcctcttt CD 251 atataatgct actaaaacct catgcaataa ctttaattac tttaccatat CD 301 gttttatTtt attggtacga aataaaagat ctttcagatt atcaaccttt CD 351 acgccctata acatcactta atgatactgg aattattCaa atatttctga CD 401 atagttttct ctttcaaata tttaatccca ttcttttacc aagtcccgtg CD 451 ttaacaagat tagtaaaact ttttttattt cgttatagcc ataattcatt CD 501 ctTtgttata agtctcttct gtggttggtt gggtggtaat attttgctta CD 551 taaatttaag taagtttctt ctaattcgta taaaaaataa ttcatctaca CD 601 ctttatctct tagtcaaacg tcttatttat cgaactttta gtattattat CD 651 ttTtgttgct tgtttatcat acttaggtaa atttccagta cctttctcta CD 701 tgaaaaaatc aagtgatgaa tcttcattaa atgaatggaa agctgagaga CD 751 ttatcatggt tatataaacc atggcctact tctctcttta attatcgtaa CD 801 atggaatcga ccgttacgat atattgaaaa tagtcggttt agtaataaga CD 851 gtcccgtaaa aagaaatgta tctcaatatt tttttgatgt atgtttgaat CD 901 gatgggagac aaagaatatc tttcacatct ttacctagtt tttcaatttt CD 951 tgaaaaaaat ttgaaaaact acttaaacgt ttcgagaatt tcctcctcat CD 1001 ctgatgtttt ttatcaggag tggattaata cgaagaaaga aCaaaaagat CD 1051 gatttgtata gcgaagtaga agaaagaatt aaagctttag acaatggatt CD 1101 ttctttagag catgctatag aaaaaagaat aggattttct agtattaata CD 1151 aagaagatat tcctaataaa acttatgatc cttttttaga tggagaattc CD 1201 cgcggaaaag ttgcagtatc aCaatcacct ttacttctga cggggaagtc CD 1251 ctacgggtta accaagacac aaaagttact ccatttatcg aggaagaata CD 1301 ataaattaaa attttggatt tctaataaat ggcgaaagtt ggaacgtaag CD 1351 gatctaccat tgccttggga accactaacc caagatgctc gtcgagtttt CD 1401 gattttacTt attaaaggat tgaggaataa gaaatctaag atagactcac CD 1451 agagaaatga tttttcaaaa gaacaaggag taatagctct aaatgaagaa CD 1501 aatatttctc ccgaattctc agcaaagact aacaatacaa actttttacg CD 1551 agaaaaagca attcgaaaat cacatattaa ttgggaactt gttttaaatc CD 1601 tctctctcCg acaaagaatt ttatacttta attatttgga gaaggttaaa CD 1651 tgggagacga ttaaaaattc ttggaaagat ttaatatcgg gtaactTtac CD 1701 tgaagtcaaa aatattggtt ctttagtgat gaaaataatg aaaatccatc CD 1751 aggaatctcc acttcaagaa tttcataaag aggtacctcg ctggacttcg CD 1801 aaactgaaaa atgataaatt tgatgttata gctattggag ttactgatat CD 1851 tCgtcaaaga aaagtaagaa atttaggtta tcttattaag gggagagaaa CD 1901 agagaagaaa gattgtaaga cgtttttcac aacaatcaga ttttcgtcgg CD 1951 aaactcataa agggatctat gcgtgctaga agacgcaaaa ctttgatatg CD 2001 gaaaatttta caaTttaaaa cacattctcc tttttttCta aaaataacgg CD 2051 aaaaacccgc tttgtttcga tctacggaaa ttatggaaga tatagatgta CD 2101 aaagggactt ttctaaatac tataggaatt gaaaaattaa tatctttgtt CD 2151 aagtgagaga ggagttgcta tcaaaggaac aaaagccgat cgccttgcaa CD 2201 tagcaaatag atgggatttt ccattagctc aatggggaag aagttggtta CD 2251 ttaattattc aatcgtatct taggaaatat gtggtactac ctatattaat CD 2301 aatactaaaa aatattagtc gtttatttct attacaagtt cctgaatgga CD 2351 atgaagattg gaatgaatgg agtgaggaga ttcatataaa atgcacttat CD 2401 gatgggactg aagtttcaga aagggaatta ccagaaCaat ggcttaggga CD 2451 tggtcTtcag ataaaaataa tttatccttt tcatttaaaa ccttggcata CD 2501 attctaagtt caaagaaaag gggaatagaa atatggaacc taattttcct CD 2551 catactcaga acaaaggaaa agaaacatca gataataaag catatagatt CD 2601 acaaaaaaac aagaaattta aatatagttt tttaacagct tggggatttc CD 2651 aaactaactt accttttggt aatataaaga aacaaccttc tttttggaaa CD 2701 ccagttatta aagaattgaa aaagagatgg aaaagagaga ttctctcaaa CD 2751 aactgctaat ttttatgaac tttattacaa tatatcgcta ctatacagaa CD 2801 aatccgatat ttctaataga tttaaaattt ttgcagaatt tgatattcaa CD 2851 acagatgaac gtatgaatca tgaaatatct aaaattcaag tcaatagtga CD 2901 atccggtgga gctagtgtta cggatgatgg aattaaaaga gaatcacctc CD 2951 taggtattac tcttaattct gaaaattcaa atttcagtga aaatgaagat CD 3001 tttctgtggg aaattccagt tgaatctaga tataaaactg cgaaaaacat CD 3051 taagaaatta gaaagtttag tcgtatctaa gaataatcta acttga SQ SEQUENCE 1032 AA; MITSITLLFS ILWAQILSWI SISGPLILFG LYYGFSITLP MGPSQILSIR AFLLEGNLSG LMALGGSTLG QLIILISIFY SPLYIMLLKP HAITLITLPY VLFYWYEIKD LSDYQPLRPI TSLNDTGIIQ IFLNSFLFQI FNPILLPSPV LTRLVKLFLF RYSHNSFFVI SLFCGWLGGN ILLINLSKFL LIRIKNNSST LYLLVKRLIY RTFSIIIFVA CLSYLGKFPV PFSMKKSSDE SSLNEWKAER LSWLYKPWPT SLFNYRKWNR PLRYIENSRF SNKSPVKRNV SQYFFDVCLN DGRQRISFTS LPSFSIFEKN LKNYLNVSRI SSSSDVFYQE WINTKKEQKD DLYSEVEERI KALDNGFSLE HAIEKRIGFS SINKEDIPNK TYDPFLDGEF RGKVAVSQSP LLLTGKSYGL TKTQKLLHLS RKNNKLKFWI SNKWRKLERK DLPLPWEPLT QDARRVLILL IKGLRNKKSK IDSQRNDFSK EQGVIALNEE NISPEFSAKT NNTNFLREKA IRKSHINWEL VLNLSLRQRI LYFNYLEKVK WETIKNSWKD LISGNFTEVK NIGSLVMKIM KIHQESPLQE FHKEVPRWTS KLKNDKFDVI AIGVTDIRQR KVRNLGYLIK GREKRRKIVR RFSQQSDFRR KLIKGSMRAR RRKTLIWKIL QFKTHSPFFL KITEKPALFR STEIMEDIDV KGTFLNTIGI EKLISLLSER GVAIKGTKAD RLAIANRWDF PLAQWGRSWL LIIQSYLRKY VVLPILIILK NISRLFLLQV PEWNEDWNEW SEEIHIKCTY DGTEVSEREL PEQWLRDGLQ IKIIYPFHLK PWHNSKFKEK GNRNMEPNFP HTQNKGKETS DNKAYRLQKN KKFKYSFLTA WGFQTNLPFG NIKKQPSFWK PVIKELKKRW KREILSKTAN FYELYYNISL LYRKSDISNR FKIFAEFDIQ TDERMNHEIS KIQVNSESGG ASVTDDGIKR ESPLGITLNS ENSNFSENED FLWEIPVESR YKTAKNIKKL ESLVVSKNNL T* // ID AB086179_89 STANDARD; PRT; 472 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : chlN FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55410.1 FT PROTEIN_NAME : protochlorophyllide reductase 48 kDa chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 142902 - 144317 FT DIRECTIONS : negative FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 32 *(Taa) -> Q(Caa) FT EDITING : 50 F(ttC) -> F(ttT) FT EDITING : 60 L(Ctt) -> F(Ttt) FT EDITING : 65 H(Cat) -> Y(Tat) FT EDITING : 70 S(tCa) -> L(tTa) FT EDITING : 85 S(tCa) -> L(tTa) FT EDITING : 101 T(aCt) -> I(aTt) FT EDITING : 111 T(aCa) -> I(aTa) FT EDITING : 143 S(tCt) -> F(tTt) FT EDITING : 145 *(Taa) -> Q(Caa) FT EDITING : 151 P(cCa) -> L(cTa) FT EDITING : 152 V(gTt) -> A(gCt) FT EDITING : 254 L(cTt) -> P(cCt) FT EDITING : 255 P(CCt) -> F(TTt) FT EDITING : 256 S(tCa) -> L(tTa) FT EDITING : 258 *(Tga) -> R(Cga) FT EDITING : 277 L(cTa) -> P(cCa) FT EDITING : 325 S(tCt) -> F(tTt) FT EDITING : 326 S(tCt) -> F(tTt) FT EDITING : 353 L(cTa) -> P(cCa) FT EDITING : 364 P(cCa) -> L(cTa) FT EDITING : 366 P(cCt) -> L(cTt) FT EDITING : 379 L(TTg) -> P(CCg) FT EDITING : 429 *(Taa) -> Q(Caa) FT EDITING : 440 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 1416 NT; CD 1 atgtcaatcc aaatatctga aactctcact tttgaatgcg aaacaggtaa CD 51 ttaccatact ttttgtccta ttagttgtgt agcttggtCa tacTaaaaaa CD 101 tagaagatag ttttttttta gtgataggta caaaaacatg tggttatttC CD 151 ttacaaaacg ctcttggtgt tatgattCtt gcagaaccac gtCatgctat CD 201 ggcagaatCa gaagagggag atatttcagc tcaattaaat gattatgaag CD 251 aatCaaaaag actttgtttt caaataaaga aggatagaaa tcctagtgtt CD 301 aCtatatgga tcggtacctg tacgactgaa aCaataaaga tggatttgga CD 351 aggaatggca ccgaaattag aagtggaact tggagtacca attgtagtag CD 401 caagagcaaa tggattagat tatgcttCta ctTaaggaga agataccgta CD 451 cCagTtgcta tggcccaccg ttgcccagaa cgagatttgt tgattgatga CD 501 aaataaagtt atacaaaatc aaactataca aaatattttt tctctttttt CD 551 ctcaaaaaaa gaaagaggaa actttgaaat atctagaatt gaaaaatcat CD 601 cctccattag ttctcttcgg atccctaccc tctactgtag cttctcaact CD 651 tagcttagaa ttgaagcgtc aatctattca agtatctggt tggttaccga CD 701 ctcagagata taccgatctt ccatcactag gtgatggagt ttatgtttgt CD 751 ggtgttaatc TtCCttCaag cTgaacagca accactttga tacgacgtcg CD 801 gaaatgcaaa ttaattggag caccttttcT aattggtcct gatggaacac CD 851 gtgcttggat tgaaaaaata agttctgttt ttgggatcaa gaccaaaggt CD 901 ttggaggaga gggaacaaca ggtatggcaa agtttgaaga attatcttaa CD 951 cctagtgcgt ggaaaatccg tttCttCtat gggagataat cttttagaaa CD 1001 tatctttagc aagattttta attcgatgcg gaatgattgt ttatgaaatt CD 1051 ggtattcTat atatggataa gaggtatcaa gctgctgaac CagcacCttt CD 1101 aagaaatacg tgtagagaga tgtgtacacc tatgTTgaga attgttgaga CD 1151 aacctgataa ttataatcag atacaacgta tgcgtgagtt gcaaccagat CD 1201 ttagccataa ctggaatggc tcatgctaat ccattagaag ctagaggaat CD 1251 taacacaaaa tggtcagttg aatttacttt tgctTaaatt catggattta CD 1301 ctaatgccaa agatgtgcCt gaacttgtga cccgtccttt acgacgtaac CD 1351 aatagtttag aagatttggg ttggacaaat ttaataaaga aagacaataa CD 1401 aataaaagta atttaa FT EDITED CDNA CD 1 atgtcaatcc aaatatctga aactctcact tttgaatgcg aaacaggtaa CD 51 ttaccatact ttttgtccta ttagttgtgt agcttggtTa tacCaaaaaa CD 101 tagaagatag ttttttttta gtgataggta caaaaacatg tggttatttT CD 151 ttacaaaacg ctcttggtgt tatgattTtt gcagaaccac gtTatgctat CD 201 ggcagaatTa gaagagggag atatttcagc tcaattaaat gattatgaag CD 251 aatTaaaaag actttgtttt caaataaaga aggatagaaa tcctagtgtt CD 301 aTtatatgga tcggtacctg tacgactgaa aTaataaaga tggatttgga CD 351 aggaatggca ccgaaattag aagtggaact tggagtacca attgtagtag CD 401 caagagcaaa tggattagat tatgcttTta ctCaaggaga agataccgta CD 451 cTagCtgcta tggcccaccg ttgcccagaa cgagatttgt tgattgatga CD 501 aaataaagtt atacaaaatc aaactataca aaatattttt tctctttttt CD 551 ctcaaaaaaa gaaagaggaa actttgaaat atctagaatt gaaaaatcat CD 601 cctccattag ttctcttcgg atccctaccc tctactgtag cttctcaact CD 651 tagcttagaa ttgaagcgtc aatctattca agtatctggt tggttaccga CD 701 ctcagagata taccgatctt ccatcactag gtgatggagt ttatgtttgt CD 751 ggtgttaatc CtTTttTaag cCgaacagca accactttga tacgacgtcg CD 801 gaaatgcaaa ttaattggag caccttttcC aattggtcct gatggaacac CD 851 gtgcttggat tgaaaaaata agttctgttt ttgggatcaa gaccaaaggt CD 901 ttggaggaga gggaacaaca ggtatggcaa agtttgaaga attatcttaa CD 951 cctagtgcgt ggaaaatccg tttTttTtat gggagataat cttttagaaa CD 1001 tatctttagc aagattttta attcgatgcg gaatgattgt ttatgaaatt CD 1051 ggtattcCat atatggataa gaggtatcaa gctgctgaac TagcacTttt CD 1101 aagaaatacg tgtagagaga tgtgtacacc tatgCCgaga attgttgaga CD 1151 aacctgataa ttataatcag atacaacgta tgcgtgagtt gcaaccagat CD 1201 ttagccataa ctggaatggc tcatgctaat ccattagaag ctagaggaat CD 1251 taacacaaaa tggtcagttg aatttacttt tgctCaaatt catggattta CD 1301 ctaatgccaa agatgtgcTt gaacttgtga cccgtccttt acgacgtaac CD 1351 aatagtttag aagatttggg ttggacaaat ttaataaaga aagacaataa CD 1401 aataaaagta atttaa SQ SEQUENCE 472 AA; MSIQISETLT FECETGNYHT FCPISCVAWL YQKIEDSFFL VIGTKTCGYF LQNALGVMIF AEPRYAMAEL EEGDISAQLN DYEELKRLCF QIKKDRNPSV IIWIGTCTTE IIKMDLEGMA PKLEVELGVP IVVARANGLD YAFTQGEDTV LAAMAHRCPE RDLLIDENKV IQNQTIQNIF SLFSQKKKEE TLKYLELKNH PPLVLFGSLP STVASQLSLE LKRQSIQVSG WLPTQRYTDL PSLGDGVYVC GVNPFLSRTA TTLIRRRKCK LIGAPFPIGP DGTRAWIEKI SSVFGIKTKG LEEREQQVWQ SLKNYLNLVR GKSVFFMGDN LLEISLARFL IRCGMIVYEI GIPYMDKRYQ AAELALLRNT CREMCTPMPR IVEKPDNYNQ IQRMRELQPD LAITGMAHAN PLEARGINTK WSVEFTFAQI HGFTNAKDVL ELVTRPLRRN NSLEDLGWTN LIKKDNKIKV I* // ID AB086179_90 STANDARD; PRT; 291 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : chlL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC55411.1 FT PROTEIN_NAME : protochlorophyllide reductase Fe protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 144372 - 145244 FT DIRECTIONS : negative FT EDITING : 20 I(aTt) -> T(aCt) FT EDITING : 24 L(tTg) -> S(tCg) FT EDITING : 49 F(tTt) -> S(tCt) FT EDITING : 58 L(tTa) -> S(tCa) FT EDITING : 86 A(gCt) -> V(gTt) FT EDITING : 124 L(tTa) -> S(tCa) FT EDITING : 133 A(gCg) -> V(gTg) FT EDITING : 134 A(gCt) -> V(gTt) FT EDITING : 135 P(cCa) -> L(cTa) FT EDITING : 156 A(gCt) -> V(gTt) FT EDITING : 158 R(Cgt) -> C(Tgt) FT EDITING : 171 P(Cca) -> S(Tca) FT EDITING : 177 L(tTa) -> S(tCa) FT EDITING : 203 L(tTa) -> S(tCa) FT EDITING : 204 P(cCc) -> L(cTc) FT EDITING : 219 L(tTa) -> S(tCa) FT CODON_START : 1 CL CDNALEN 873 NT; CD 1 gtgaaaatag cagtttatgg gaaaggtgga attggtaaat cgacaacaag CD 51 ttgtaataTt tctattgctt Tggcaaggcg tggaaaacgt gttttgcaaa CD 101 ttggatgtga tcctaaacat gatagtactt ttaccttgac tggttTtcta CD 151 atacccacca ttatagatac ttTacaatct aaagattatc attatgaaga CD 201 cgtttggcct gaagatgtaa tttataaagg ttatggaggg gtagattgcg CD 251 tagaagCtgg aggaccacct gcaggagccg gatgtggagg gtatgtcgta CD 301 ggagaaacgg ttaaattatt aaaagaatta aatgcttttt atgaatatga CD 351 tattatttta tttgatgttt Taggggatgt tgtttgtggt ggtttcgCgg CD 401 CtcCattaaa ttatgcagat tattgtatta tcattacgga taacggattt CD 451 gatgctttat ttgcagCtaa cCgtattgct gcctctgtaa gagaaaaggc CD 501 tcgtacacat Ccattacgat tagcaggttT agttggaaat cgcacatcta CD 551 aaagagatct cattaataga tatgtagaag cttgtccaat gccagtatta CD 601 gaagtatTac Ccctcattga agacattcga gtatctcgag tgaaaggaaa CD 651 aacctTattt gaaatggttg aatttcaacc atttcttaac tatgtctgtg CD 701 aattctattt gaatatagca gatcaaattt tgtctcaacc tgaaggtgtt CD 751 ataccaaaag aaattccaga tcgggaatta ttcagtttac tttccgattt CD 801 ctatttgaat ccgactaaca atgaaagaga gaataaaaat caagaaactt CD 851 tgcttgattt catgattatt tga FT EDITED CDNA CD 1 gtgaaaatag cagtttatgg gaaaggtgga attggtaaat cgacaacaag CD 51 ttgtaataCt tctattgctt Cggcaaggcg tggaaaacgt gttttgcaaa CD 101 ttggatgtga tcctaaacat gatagtactt ttaccttgac tggttCtcta CD 151 atacccacca ttatagatac ttCacaatct aaagattatc attatgaaga CD 201 cgtttggcct gaagatgtaa tttataaagg ttatggaggg gtagattgcg CD 251 tagaagTtgg aggaccacct gcaggagccg gatgtggagg gtatgtcgta CD 301 ggagaaacgg ttaaattatt aaaagaatta aatgcttttt atgaatatga CD 351 tattatttta tttgatgttt Caggggatgt tgtttgtggt ggtttcgTgg CD 401 TtcTattaaa ttatgcagat tattgtatta tcattacgga taacggattt CD 451 gatgctttat ttgcagTtaa cTgtattgct gcctctgtaa gagaaaaggc CD 501 tcgtacacat Tcattacgat tagcaggttC agttggaaat cgcacatcta CD 551 aaagagatct cattaataga tatgtagaag cttgtccaat gccagtatta CD 601 gaagtatCac Tcctcattga agacattcga gtatctcgag tgaaaggaaa CD 651 aacctCattt gaaatggttg aatttcaacc atttcttaac tatgtctgtg CD 701 aattctattt gaatatagca gatcaaattt tgtctcaacc tgaaggtgtt CD 751 ataccaaaag aaattccaga tcgggaatta ttcagtttac tttccgattt CD 801 ctatttgaat ccgactaaca atgaaagaga gaataaaaat caagaaactt CD 851 tgcttgattt catgattatt tga SQ SEQUENCE 291 AA; VKIAVYGKGG IGKSTTSCNT SIASARRGKR VLQIGCDPKH DSTFTLTGSL IPTIIDTSQS KDYHYEDVWP EDVIYKGYGG VDCVEVGGPP AGAGCGGYVV GETVKLLKEL NAFYEYDIIL FDVSGDVVCG GFVVLLNYAD YCIIITDNGF DALFAVNCIA ASVREKARTH SLRLAGSVGN RTSKRDLINR YVEACPMPVL EVSLLIEDIR VSRVKGKTSF EMVEFQPFLN YVCEFYLNIA DQILSQPEGV IPKEIPDREL FSLLSDFYLN PTNNERENKN QETLLDFMII * // ID AB086179_91 STANDARD; PRT; 156 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : rps7 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55412.1 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 157993 - 158460 FT DIRECTIONS : positive FT EDITING : 21 *(Tga) -> R(Cga) FT EDITING : 71 S(Tct) -> P(Cct) FT EDITING : 86 *(Taa) -> Q(Caa) FT EDITING : 108 F(tTt) -> S(tCt) FT EDITING : 124 S(tCa) -> L(tTa) FT EDITING : 127 V(gTt) -> A(gCt) FT CODON_START : 1 CL CDNALEN 468 NT; CD 1 atgtcgcgcc gaggtactac agagaaacaa atcgaaaaac ctgatccaat CD 51 ttatcgtaac Tgattggtta acttgttggt taatcgtatc ttgaggaatg CD 101 gaaaaaaatc attggcttat cgaattcttt atggagccat gagaaatatt CD 151 agacgagcaa cgaagaaaaa tccattatcc gtattacgtc aagcagtacg CD 201 tagagtaact Tctaatgtta cggtaaaagc acgacgtgta ggtggttcga CD 251 cctatTaagt ccccattgaa atagaatctt cacaaggaaa agcgcttgct CD 301 attcgttggt tattagtggc atTtaaaaaa cgtccaggtc gaaatatggc CD 351 ttttaaattg agttacgaat CaatagatgT tgctagggat aatggaaatg CD 401 ctgtgcgtaa aagagaggaa actcatagaa tggcagaggc taatagagct CD 451 ttcgctcatt ttcgctaa FT EDITED CDNA CD 1 atgtcgcgcc gaggtactac agagaaacaa atcgaaaaac ctgatccaat CD 51 ttatcgtaac Cgattggtta acttgttggt taatcgtatc ttgaggaatg CD 101 gaaaaaaatc attggcttat cgaattcttt atggagccat gagaaatatt CD 151 agacgagcaa cgaagaaaaa tccattatcc gtattacgtc aagcagtacg CD 201 tagagtaact Cctaatgtta cggtaaaagc acgacgtgta ggtggttcga CD 251 cctatCaagt ccccattgaa atagaatctt cacaaggaaa agcgcttgct CD 301 attcgttggt tattagtggc atCtaaaaaa cgtccaggtc gaaatatggc CD 351 ttttaaattg agttacgaat TaatagatgC tgctagggat aatggaaatg CD 401 ctgtgcgtaa aagagaggaa actcatagaa tggcagaggc taatagagct CD 451 ttcgctcatt ttcgctaa SQ SEQUENCE 156 AA; MSRRGTTEKQ IEKPDPIYRN RLVNLLVNRI LRNGKKSLAY RILYGAMRNI RRATKKNPLS VLRQAVRRVT PNVTVKARRV GGSTYQVPIE IESSQGKALA IRWLLVASKK RPGRNMAFKL SYELIDAARD NGNAVRKREE THRMAEANRA FAHFR* // ID AB086179_92 STANDARD; PRT; 501 AA. AC AB086179; DT Tue Jul 21 07:00:05 2009 DE Anthoceros formosae chloroplast DNA, complete genome. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 31 (2), 716-721 (2003) RL PUBMED 12527781 FT Full length CDS FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC55413.1 FT PROTEIN_NAME : NADH dehydrogenase ND2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 242/0 FT EDITING : 89 P(Ccg) -> S(Tcg) FT EDITING : 120 T(aCa) -> I(aTa) FT EDITING : 145 F(tTc) -> S(tCc) FT EDITING : 157 *(Tga) -> R(Cga) FT EDITING : 158 F(tTc) -> S(tCc) FT EDITING : 167 P(cCt) -> L(cTt) FT EDITING : 174 P(Ccc) -> S(Tcc) FT EDITING : 180 S(tCt) -> F(tTt) FT EDITING : 197 L(Ctt) -> F(Ttt) FT EDITING : 294 S(tCt) -> F(tTt) FT EDITING : 310 L(tTg) -> S(tCg) FT EDITING : 335 H(Cac) -> Y(Tac) FT EDITING : 341 L(Ctt) -> F(Ttt) FT EDITING : 368 S(tCa) -> L(tTa) FT EDITING : 373 L(cTt) -> P(cCt) FT EDITING : 379 P(cCt) -> L(cTt) FT EDITING : 399 P(cCt) -> L(cTt) FT EDITING : 402 S(tCt) -> F(tTt) FT EDITING : 454 L(tTg) -> S(tCg) FT EDITING : 476 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 atgaaattag attttggttc atttttatca gatggaagta gtattttacc CD 51 agaatgtatt ttaatttcta gtttaattat cattctattg atagatctaa CD 101 cctctgaaaa aaagacatat tggttatatt tcatttcatt aacaagtttg CD 151 atcataagta taactgtcct gttatttcaa ttaaaggaag aacctatttt CD 201 tagtttctca ggcagttttc aaacagacgg ttttaatgga atattccgaa CD 251 tctctattgc atttCcgtca cttctatgta ttcccttatc tatggaatat CD 301 atgaaatgta caaaaatggc gattactgaa tctttaattt ttttgttaac CD 351 agctactaCa ggaggaatgt ttttatgcgg tgctaatgat ttaataataa CD 401 tatttattac tctagaatgt ttaagtttat cctTctattt attatccgga CD 451 tatactaaga aagatgtaTg atTcaatgaa gctgctatga agtatttacC CD 501 tatgggtgga gcaagttctC ccattctggc ttatggttCt tcatggttat CD 551 acggtttatc tggggggaaa atccaacttc aagagattCt taatggtctt CD 601 ataaacacac aaatgtataa ctctacaagt atttcgatcg tgcttatatt CD 651 tattattgca ggaatcgcat tcaaactttc tttagtacct tttcatcaat CD 701 ggactcctga tgtatatgaa ggagccccta cctcagtcat tgctttcttt CD 751 tctgttactt caaaaatagc cggtttagct ttagctacta gaatcttcaa CD 801 cacagttttt ttttcatcac tgaacgagtg gcatctaatt ctagaaataa CD 851 tagctattct aagtatgatc ttaggtaatt Ctattgctat aacgcaaaca CD 901 agtatgaaac gtatgcttgc atattcttTg ataagtcaaa ttggatattt CD 951 tatgattgga gtaattgcgg gagactctaa tgggtatgca agcatgataa CD 1001 ctCacatgct attctacatt Cttatgaatc taggaacttt tgcttgtatt CD 1051 acattattcg gtttacgcac tggaacggac aacattcggg attatgcagg CD 1101 gtCatataaa aaagatcTtc tattggcatc ttttcCtgct ttatctttat CD 1151 tatccttagg aggtattcct cccttagctg ggtttttcgg aaaacCttac CD 1201 ctctCttggt gtgggtggaa agcgggtcta tacttatcag tctccgtagg CD 1251 acttttcaca agtgtaatct ctatatatta ctatttacga atagtcaaat CD 1301 tgattgtgac taaggaaaac gaagaaacaa cttcttatat tcggaagtat CD 1351 aaaacttctt Tgaattattt agtatcaaaa agtcctattg aatttagtat CD 1401 cattatatgt gtaataggat caacctCttc gggaatagtg attaaccccg CD 1451 tcattgctat tgttgaaaaa acaatatctc taagtagttt tattaataac CD 1501 taa FT EDITED CDNA CD 1 atgaaattag attttggttc atttttatca gatggaagta gtattttacc CD 51 agaatgtatt ttaatttcta gtttaattat cattctattg atagatctaa CD 101 cctctgaaaa aaagacatat tggttatatt tcatttcatt aacaagtttg CD 151 atcataagta taactgtcct gttatttcaa ttaaaggaag aacctatttt CD 201 tagtttctca ggcagttttc aaacagacgg ttttaatgga atattccgaa CD 251 tctctattgc atttTcgtca cttctatgta ttcccttatc tatggaatat CD 301 atgaaatgta caaaaatggc gattactgaa tctttaattt ttttgttaac CD 351 agctactaTa ggaggaatgt ttttatgcgg tgctaatgat ttaataataa CD 401 tatttattac tctagaatgt ttaagtttat cctCctattt attatccgga CD 451 tatactaaga aagatgtaCg atCcaatgaa gctgctatga agtatttacT CD 501 tatgggtgga gcaagttctT ccattctggc ttatggttTt tcatggttat CD 551 acggtttatc tggggggaaa atccaacttc aagagattTt taatggtctt CD 601 ataaacacac aaatgtataa ctctacaagt atttcgatcg tgcttatatt CD 651 tattattgca ggaatcgcat tcaaactttc tttagtacct tttcatcaat CD 701 ggactcctga tgtatatgaa ggagccccta cctcagtcat tgctttcttt CD 751 tctgttactt caaaaatagc cggtttagct ttagctacta gaatcttcaa CD 801 cacagttttt ttttcatcac tgaacgagtg gcatctaatt ctagaaataa CD 851 tagctattct aagtatgatc ttaggtaatt Ttattgctat aacgcaaaca CD 901 agtatgaaac gtatgcttgc atattcttCg ataagtcaaa ttggatattt CD 951 tatgattgga gtaattgcgg gagactctaa tgggtatgca agcatgataa CD 1001 ctTacatgct attctacatt Tttatgaatc taggaacttt tgcttgtatt CD 1051 acattattcg gtttacgcac tggaacggac aacattcggg attatgcagg CD 1101 gtTatataaa aaagatcCtc tattggcatc ttttcTtgct ttatctttat CD 1151 tatccttagg aggtattcct cccttagctg ggtttttcgg aaaacTttac CD 1201 ctctTttggt gtgggtggaa agcgggtcta tacttatcag tctccgtagg CD 1251 acttttcaca agtgtaatct ctatatatta ctatttacga atagtcaaat CD 1301 tgattgtgac taaggaaaac gaagaaacaa cttcttatat tcggaagtat CD 1351 aaaacttctt Cgaattattt agtatcaaaa agtcctattg aatttagtat CD 1401 cattatatgt gtaataggat caacctTttc gggaatagtg attaaccccg CD 1451 tcattgctat tgttgaaaaa acaatatctc taagtagttt tattaataac CD 1501 taa SQ SEQUENCE 501 AA; MKLDFGSFLS DGSSILPECI LISSLIIILL IDLTSEKKTY WLYFISLTSL IISITVLLFQ LKEEPIFSFS GSFQTDGFNG IFRISIAFSS LLCIPLSMEY MKCTKMAITE SLIFLLTATI GGMFLCGAND LIIIFITLEC LSLSSYLLSG YTKKDVRSNE AAMKYLLMGG ASSSILAYGF SWLYGLSGGK IQLQEIFNGL INTQMYNSTS ISIVLIFIIA GIAFKLSLVP FHQWTPDVYE GAPTSVIAFF SVTSKIAGLA LATRIFNTVF FSSLNEWHLI LEIIAILSMI LGNFIAITQT SMKRMLAYSS ISQIGYFMIG VIAGDSNGYA SMITYMLFYI FMNLGTFACI TLFGLRTGTD NIRDYAGLYK KDPLLASFLA LSLLSLGGIP PLAGFFGKLY LFWCGWKAGL YLSVSVGLFT SVISIYYYLR IVKLIVTKEN EETTSYIRKY KTSSNYLVSK SPIEFSIIIC VIGSTFSGIV INPVIAIVEK TISLSSFINN * // ID AB098210_1 STANDARD; PRT; 223 AA. AC AB098210; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rps2 gene for ribosomal protein S2, partial OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : rps2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77547.1 FT PROTEIN_NAME : ribosomal protein S2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 667 FT DIRECTIONS : positive FT EDITING : 45 T(aCa) -> I(aTa) FT EDITING : 83 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 667 NT; CD 1 atgacaagaa gatattggaa cataaatttg gaagagatga tggaggcagg CD 51 agttcatttt ggtcatggta ctaggaaatg gaatcctaaa atggcgcctt CD 101 atatttctgc aaagcgtaag ggtattcata ttaCaaatct tactagaact CD 151 gctcgttttt tatcagaagc ttgtgattta gtttttgacg cagcaagtag CD 201 gggaaaacaa ttcttaattg ttggtaccaa aaataaagca gctgattCag CD 251 tagagtgggc tgcaataagg gcccggtgtc attatgttaa taaaaaatgg CD 301 cttggcggta tgttaacgaa ttggtccact accgaaacaa gacttcataa CD 351 gttcagggac ttgagaatgg aacaaaaaac agggagactc aaccgtctcc CD 401 cgaaaagaga tgctgctatg ttgaaaagac aattatctcg cttgcaaaca CD 451 tatctgggcg ggattaaata tatgacaggg gtacccgata ttgtaatcat CD 501 cgttgatcag cacgaagaat atacggccct gcgagagtgt attactttag CD 551 gaattccaac aatttgttta accgatacaa attgtgaccc cgatctcgca CD 601 gatatttcaa ttccagcgaa tgatgacgcc atatcctcaa tccgattaat CD 651 tcttaacaaa ttagtat FT EDITED CDNA CD 1 atgacaagaa gatattggaa cataaatttg gaagagatga tggaggcagg CD 51 agttcatttt ggtcatggta ctaggaaatg gaatcctaaa atggcgcctt CD 101 atatttctgc aaagcgtaag ggtattcata ttaTaaatct tactagaact CD 151 gctcgttttt tatcagaagc ttgtgattta gtttttgacg cagcaagtag CD 201 gggaaaacaa ttcttaattg ttggtaccaa aaataaagca gctgattTag CD 251 tagagtgggc tgcaataagg gcccggtgtc attatgttaa taaaaaatgg CD 301 cttggcggta tgttaacgaa ttggtccact accgaaacaa gacttcataa CD 351 gttcagggac ttgagaatgg aacaaaaaac agggagactc aaccgtctcc CD 401 cgaaaagaga tgctgctatg ttgaaaagac aattatctcg cttgcaaaca CD 451 tatctgggcg ggattaaata tatgacaggg gtacccgata ttgtaatcat CD 501 cgttgatcag cacgaagaat atacggccct gcgagagtgt attactttag CD 551 gaattccaac aatttgttta accgatacaa attgtgaccc cgatctcgca CD 601 gatatttcaa ttccagcgaa tgatgacgcc atatcctcaa tccgattaat CD 651 tcttaacaaa ttagtat SQ SEQUENCE 223 AA; MTRRYWNINL EEMMEAGVHF GHGTRKWNPK MAPYISAKRK GIHIINLTRT ARFLSEACDL VFDAASRGKQ FLIVGTKNKA ADLVEWAAIR ARCHYVNKKW LGGMLTNWST TETRLHKFRD LRMEQKTGRL NRLPKRDAAM LKRQLSRLQT YLGGIKYMTG VPDIVIIVDQ HEEYTALREC ITLGIPTICL TDTNCDPDLA DISIPANDDA ISSIRLILNK LVX // ID AB098211_1 STANDARD; PRT; 101 AA. AC AB098211; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rps14 gene for ribosomal protein S14, complete OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT Full length CDS FT GENE : rps14 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77548.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 303 FT DIRECTIONS : positive FT EDITING : 27 S(tCa) -> L(tTa) FT EDITING : 50 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atggcaagga aaagtttgat tcagagggag aagaagaggc aaaaattgga CD 51 acagaaatat cattcgattc gtcgatcctC aaagaaagaa ataagcaagg CD 101 ttccgtcgtt gagtgacaaa tgggaaattt atggaaagtt acaatcccCa CD 151 ccacggaata gtgcacctac acgccttcat cgacgttgtt ttttgaccgg CD 201 aaggccgaga gctaactatc gagactttgg actatccgga cacatacttc CD 251 gtgaaatggt tcatgcatgt ttgttgccag gagcaacaag atcaagttgg CD 301 taa FT EDITED CDNA CD 1 atggcaagga aaagtttgat tcagagggag aagaagaggc aaaaattgga CD 51 acagaaatat cattcgattc gtcgatcctT aaagaaagaa ataagcaagg CD 101 ttccgtcgtt gagtgacaaa tgggaaattt atggaaagtt acaatcccTa CD 151 ccacggaata gtgcacctac acgccttcat cgacgttgtt ttttgaccgg CD 201 aaggccgaga gctaactatc gagactttgg actatccgga cacatacttc CD 251 gtgaaatggt tcatgcatgt ttgttgccag gagcaacaag atcaagttgg CD 301 taa SQ SEQUENCE 101 AA; MARKSLIQRE KKRQKLEQKY HSIRRSLKKE ISKVPSLSDK WEIYGKLQSL PRNSAPTRLH RRCFLTGRPR ANYRDFGLSG HILREMVHAC LLPGATRSSW * // ID AB098212_1 STANDARD; PRT; 112 AA. AC AB098212; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rpoC2 gene for RNA polymerase beta'' subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoC2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77549.1 FT PROTEIN_NAME : RNA polymerase beta'' subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 336 FT DIRECTIONS : positive FT EDITING : 47 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 336 NT; CD 1 cgaatctctt tggttaataa aatccaacag gtttatcgct cccagggggt CD 51 gcagattcat aataggcatc tagaaattat tgtacgtcaa ataacatcaa CD 101 aagtgttggt ttcagaagat ggaatgtcta atgttttttC acccggagaa CD 151 cttattggat tgttgcgagc agaacgaatg gggcgcgctt tggaagaagc CD 201 gatctgttac cgagtcgtct tattgggaat aacaagagca tctctcaata CD 251 ctcaaagttt catatctgaa gcgagttttc aagaaactgc tcgagtttta CD 301 gcaaaagcgg ctctccgggg tcgtatcgat tggttg FT EDITED CDNA CD 1 cgaatctctt tggttaataa aatccaacag gtttatcgct cccagggggt CD 51 gcagattcat aataggcatc tagaaattat tgtacgtcaa ataacatcaa CD 101 aagtgttggt ttcagaagat ggaatgtcta atgttttttT acccggagaa CD 151 cttattggat tgttgcgagc agaacgaatg gggcgcgctt tggaagaagc CD 201 gatctgttac cgagtcgtct tattgggaat aacaagagca tctctcaata CD 251 ctcaaagttt catatctgaa gcgagttttc aagaaactgc tcgagtttta CD 301 gcaaaagcgg ctctccgggg tcgtatcgat tggttg SQ SEQUENCE 112 AA; RISLVNKIQQ VYRSQGVQIH NRHLEIIVRQ ITSKVLVSED GMSNVFLPGE LIGLLRAERM GRALEEAICY RVVLLGITRA SLNTQSFISE ASFQETARVL AKAALRGRID WL // ID AB098213_1 STANDARD; PRT; 150 AA. AC AB098213; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rpoC1 gene for RNA polymerase beta' subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoC1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77550.1 FT PROTEIN_NAME : RNA polymerase beta' subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 450 FT DIRECTIONS : positive FT EDITING : 21 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 450 NT; CD 1 atgaataata atttttcttc tatgatcgat cgatataaac atcaacagct CD 51 ccgaattgga tCagtttctc ctcaacaaat aagtgcttgg gccactaaaa CD 101 tcctgcctaa tggagagata gttggagagg taacaaaacc ctatactttt CD 151 cattacaaaa ctaacaaacc ggaaaaagat ggattatttt gtgaaagaat CD 201 ttttggtcct ataaaaagcg gaatttgtgc ttgtggaaat tatcgagtaa CD 251 tcggagatga aaaagaagac ccgaaatttt gtgaacaatg cggggtcgaa CD 301 tttgttgatt ctcggatacg aaggtatcaa atgggctata tcaaactcgc CD 351 atgcccagta acccatgtgt ggtatttaaa acgtcttcct agttatattg CD 401 cgaatctttt agataaacct cttaaagaat tagaaggcct agtatactgc FT EDITED CDNA CD 1 atgaataata atttttcttc tatgatcgat cgatataaac atcaacagct CD 51 ccgaattgga tTagtttctc ctcaacaaat aagtgcttgg gccactaaaa CD 101 tcctgcctaa tggagagata gttggagagg taacaaaacc ctatactttt CD 151 cattacaaaa ctaacaaacc ggaaaaagat ggattatttt gtgaaagaat CD 201 ttttggtcct ataaaaagcg gaatttgtgc ttgtggaaat tatcgagtaa CD 251 tcggagatga aaaagaagac ccgaaatttt gtgaacaatg cggggtcgaa CD 301 tttgttgatt ctcggatacg aaggtatcaa atgggctata tcaaactcgc CD 351 atgcccagta acccatgtgt ggtatttaaa acgtcttcct agttatattg CD 401 cgaatctttt agataaacct cttaaagaat tagaaggcct agtatactgc SQ SEQUENCE 150 AA; MNNNFSSMID RYKHQQLRIG LVSPQQISAW ATKILPNGEI VGEVTKPYTF HYKTNKPEKD GLFCERIFGP IKSGICACGN YRVIGDEKED PKFCEQCGVE FVDSRIRRYQ MGYIKLACPV THVWYLKRLP SYIANLLDKP LKELEGLVYC // ID AB098214_1 STANDARD; PRT; 143 AA. AC AB098214; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rpoB gene for RNA polymerase beta subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77551.1 FT PROTEIN_NAME : RNA polymerase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 429 FT DIRECTIONS : positive FT EDITING : 94 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 429 NT; CD 1 gattcggggg ctcttgctat agccgaacgc gagggaaggg tcgtttatac CD 51 caatactgac aagattcttt tagcaggtaa tggagatatt ctaagcattc CD 101 cattagttat atatcaacgt tccaataaaa atacttgtat gcatcaaaaa CD 151 ctccaggttc ctcggggtaa atgcattaaa aagggacaaa ttttagcgga CD 201 tggtgctgct acggttggtg gcgaacttgc tttggggaaa aacgtattag CD 251 tagcttatat gccgtgggag ggttacaatt Ctgaagatgc agtacttatt CD 301 agcgagcgtt tggtatatga agatatttat acttcttttc acatacggaa CD 351 atatgaaatt cagactcatg tgacaagcca aggccctgaa aaagtaacta CD 401 atgaaatacc gcatttagaa gcccattta FT EDITED CDNA CD 1 gattcggggg ctcttgctat agccgaacgc gagggaaggg tcgtttatac CD 51 caatactgac aagattcttt tagcaggtaa tggagatatt ctaagcattc CD 101 cattagttat atatcaacgt tccaataaaa atacttgtat gcatcaaaaa CD 151 ctccaggttc ctcggggtaa atgcattaaa aagggacaaa ttttagcgga CD 201 tggtgctgct acggttggtg gcgaacttgc tttggggaaa aacgtattag CD 251 tagcttatat gccgtgggag ggttacaatt Ttgaagatgc agtacttatt CD 301 agcgagcgtt tggtatatga agatatttat acttcttttc acatacggaa CD 351 atatgaaatt cagactcatg tgacaagcca aggccctgaa aaagtaacta CD 401 atgaaatacc gcatttagaa gcccattta SQ SEQUENCE 143 AA; DSGALAIAER EGRVVYTNTD KILLAGNGDI LSIPLVIYQR SNKNTCMHQK LQVPRGKCIK KGQILADGAA TVGGELALGK NVLVAYMPWE GYNFEDAVLI SERLVYEDIY TSFHIRKYEI QTHVTSQGPE KVTNEIPHLE AHL // ID AB098215_1 STANDARD; PRT; 248 AA. AC AB098215; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rpoB gene for RNA polymerase beta subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77552.1 FT PROTEIN_NAME : RNA polymerase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 744 FT DIRECTIONS : positive FT EDITING : 99 S(tCt) -> F(tTt) FT EDITING : 144 S(tCa) -> L(tTa) FT EDITING : 170 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 744 NT; CD 1 tttaatcaga tacaatttga aggattttgt aggttcattg atcaaggttt CD 51 gacggaagaa ctttataagt ttccaaaaat tgaagataca gatcaagaaa CD 101 ttgaatttca attatttgtg gaaacatatc aattggtcga acccttgata CD 151 aaggaaagag atgctgtgta tgaatcactc acatattctt ctgaattata CD 201 tgtatccgcg ggattaattt ggaaaaacag tagggatatg caagaacaaa CD 251 caatttttat cggaaacatt cctctaatga attccctggg aacttCtata CD 301 gtcaatggaa tatatagaat tgtgatcaat caaatattgc aaagtcccgg CD 351 tatttattac cgatcagaat tggaccataa cggaatttcg gtctataccg CD 401 gcaccataat atcagattgg ggaggaagat Cagaattaga aattgataga CD 451 aaagcaagga tatgggctcg tgtaagtagg aaacaaaaaa tatctattct CD 501 agttctatCa tcagctatgg gtttgaatct aagagaaatt ctagagaatg CD 551 tttgctatcc tgaaattttt ttgtcttttc tgagtgataa ggagagaaaa CD 601 aaaattgggt caaaagaaaa tgccattttg gagttttatc aacaatttgc CD 651 ttgtgtaggt ggcgatccgg tattttctga atccttatgt aaggaattac CD 701 aaaagaaatt ctttcaacaa agatgtgaat taggaaggat tggt FT EDITED CDNA CD 1 tttaatcaga tacaatttga aggattttgt aggttcattg atcaaggttt CD 51 gacggaagaa ctttataagt ttccaaaaat tgaagataca gatcaagaaa CD 101 ttgaatttca attatttgtg gaaacatatc aattggtcga acccttgata CD 151 aaggaaagag atgctgtgta tgaatcactc acatattctt ctgaattata CD 201 tgtatccgcg ggattaattt ggaaaaacag tagggatatg caagaacaaa CD 251 caatttttat cggaaacatt cctctaatga attccctggg aacttTtata CD 301 gtcaatggaa tatatagaat tgtgatcaat caaatattgc aaagtcccgg CD 351 tatttattac cgatcagaat tggaccataa cggaatttcg gtctataccg CD 401 gcaccataat atcagattgg ggaggaagat Tagaattaga aattgataga CD 451 aaagcaagga tatgggctcg tgtaagtagg aaacaaaaaa tatctattct CD 501 agttctatTa tcagctatgg gtttgaatct aagagaaatt ctagagaatg CD 551 tttgctatcc tgaaattttt ttgtcttttc tgagtgataa ggagagaaaa CD 601 aaaattgggt caaaagaaaa tgccattttg gagttttatc aacaatttgc CD 651 ttgtgtaggt ggcgatccgg tattttctga atccttatgt aaggaattac CD 701 aaaagaaatt ctttcaacaa agatgtgaat taggaaggat tggt SQ SEQUENCE 248 AA; FNQIQFEGFC RFIDQGLTEE LYKFPKIEDT DQEIEFQLFV ETYQLVEPLI KERDAVYESL TYSSELYVSA GLIWKNSRDM QEQTIFIGNI PLMNSLGTFI VNGIYRIVIN QILQSPGIYY RSELDHNGIS VYTGTIISDW GGRLELEIDR KARIWARVSR KQKISILVLL SAMGLNLREI LENVCYPEIF LSFLSDKERK KIGSKENAIL EFYQQFACVG GDPVFSESLC KELQKKFFQQ RCELGRIG // ID AB098216_1 STANDARD; PRT; 80 AA. AC AB098216; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rpoA gene for RNA polymerase alpha subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77553.1 FT PROTEIN_NAME : RNA polymerase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 239 FT DIRECTIONS : positive FT EDITING : 34 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 239 NT; CD 1 cacacggttc ctttatcccc ttttaccttt catgataaat tggctaaact CD 51 cataaaaaac aaaaaaaaaa tagcattgaa atcgattttt attgaccaat CD 101 Cagaattgcc ttccaggatc tataattgcc tcaaaatgtc caatatatat CD 151 acattgttgg accttttgaa taacagccaa gaagatctta tgaaaattga CD 201 acattttcgt agcgaagatg taaaacggat attgggcat FT EDITED CDNA CD 1 cacacggttc ctttatcccc ttttaccttt catgataaat tggctaaact CD 51 cataaaaaac aaaaaaaaaa tagcattgaa atcgattttt attgaccaat CD 101 Tagaattgcc ttccaggatc tataattgcc tcaaaatgtc caatatatat CD 151 acattgttgg accttttgaa taacagccaa gaagatctta tgaaaattga CD 201 acattttcgt agcgaagatg taaaacggat attgggcat SQ SEQUENCE 80 AA; HTVPLSPFTF HDKLAKLIKN KKKIALKSIF IDQLELPSRI YNCLKMSNIY TLLDLLNNSQ EDLMKIEHFR SEDVKRILGX // ID AB098217_1 STANDARD; PRT; 76 AA. AC AB098217; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris rpl20 gene for ribosomal protein L20, partial OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : rpl20 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77554.1 FT PROTEIN_NAME : ribosomal protein L20 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 228 FT DIRECTIONS : positive FT EDITING : 50 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 228 NT; CD 1 aagagagatt ttcgtcgttt gtggatcact cggataaacg cagtaattcg CD 51 cgaaagggga gtatcctata gttatagtag attaatacac gatctgtaca CD 101 agagacagtt gcttcttaac cgtaaaatac ttgcacaaat agctatatCa CD 151 aataggaatt gtctttatat gatttcgaac gaaatcataa aggaagtaga CD 201 ttggaaagaa tccaccagaa taatttaa FT EDITED CDNA CD 1 aagagagatt ttcgtcgttt gtggatcact cggataaacg cagtaattcg CD 51 cgaaagggga gtatcctata gttatagtag attaatacac gatctgtaca CD 101 agagacagtt gcttcttaac cgtaaaatac ttgcacaaat agctatatTa CD 151 aataggaatt gtctttatat gatttcgaac gaaatcataa aggaagtaga CD 201 ttggaaagaa tccaccagaa taatttaa SQ SEQUENCE 76 AA; KRDFRRLWIT RINAVIRERG VSYSYSRLIH DLYKRQLLLN RKILAQIAIL NRNCLYMISN EIIKEVDWKE STRII* // ID AB098218_2 STANDARD; PRT; 39 AA. AC AB098218; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris psbF, psbL genes for PSII cytochrome b559 4kDa OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77556.1 FT PROTEIN_NAME : PSII L-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 144 - 260 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AB098219_1 STANDARD; PRT; 82 AA. AC AB098219; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris psbE gene for PSII cytochrome b559 8kDa OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : psbE FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77557.1 FT PROTEIN_NAME : PSII cytochrome b559 8kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 131 - 374 FT DIRECTIONS : positive FT EDITING : 72 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 244 NT; CD 1 atgtctggaa gcacaggaga acgttcgttt gctgatatta ttaccagtat CD 51 tcgatactgg gtcattcata gcattactat accttcccta ttcattgcgg CD 101 gttggttatt tgtcagcacc ggtttagctt acgatgtgtt tggaagccct CD 151 cggccaaacg agtattttac agagagccga caaggaattc cattaataac CD 201 tggccgtttt gatCctttgg aacaactcga tgaatttagt agat FT EDITED CDNA CD 1 atgtctggaa gcacaggaga acgttcgttt gctgatatta ttaccagtat CD 51 tcgatactgg gtcattcata gcattactat accttcccta ttcattgcgg CD 101 gttggttatt tgtcagcacc ggtttagctt acgatgtgtt tggaagccct CD 151 cggccaaacg agtattttac agagagccga caaggaattc cattaataac CD 201 tggccgtttt gatTctttgg aacaactcga tgaatttagt agat SQ SEQUENCE 82 AA; MSGSTGERSF ADIITSIRYW VIHSITIPSL FIAGWLFVST GLAYDVFGSP RPNEYFTESR QGIPLITGRF DSLEQLDEFS RX // ID AB098220_1 STANDARD; PRT; 68 AA. AC AB098220; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris petB gene for cytochrom b6, partial cds. OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : petB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77558.1 FT PROTEIN_NAME : cytochrom b6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 206 FT DIRECTIONS : positive FT EDITING : 56 P(cCa) -> L(cTa) FT CODON_START : 3 CL CDNALEN 206 NT; CD 1 tgaaaatagt aacaggtgtc cctgacgcta ttcctgtaat aggatcaccc CD 51 ttggtcgaat tattgcgcgg aagcgctagt gtgggacaat ctactttgac CD 101 ccgtttttat agtttacaca cttttgtatt gccgcttctt actgccgtat CD 151 ttatgttaat gcactttcCa atgatacgta aacaaggtat ttctgggcct CD 201 ttatag FT EDITED CDNA CD 1 tgaaaatagt aacaggtgtc cctgacgcta ttcctgtaat aggatcaccc CD 51 ttggtcgaat tattgcgcgg aagcgctagt gtgggacaat ctactttgac CD 101 ccgtttttat agtttacaca cttttgtatt gccgcttctt actgccgtat CD 151 ttatgttaat gcactttcTa atgatacgta aacaaggtat ttctgggcct CD 201 ttatag SQ SEQUENCE 68 AA; KIVTGVPDAI PVIGSPLVEL LRGSASVGQS TLTRFYSLHT FVLPLLTAVF MLMHFLMIRK QGISGPL* // ID AB098221_1 STANDARD; PRT; 122 AA. AC AB098221; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhF gene for NADH dehydrogenase ND5 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhF FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77559.1 FT PROTEIN_NAME : NADH dehydrogenase ND5 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 364 FT DIRECTIONS : positive FT EDITING : 53 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 364 NT; CD 1 gttttattgt taagcatagt catggttttt tcaatctacc tgtctattca CD 51 gcaaataaat agcagttctt tttatcaata tgtatggtct tggatcatca CD 101 ataatgattt ttctttagac ttcggatact tgatcgaccc acttacttct CD 151 attatgtCaa tattaatcac tacggttgga attatggttc ttatttatag CD 201 tgataattat atggctcatg atcaaggcta tttgagattt tttgcttata CD 251 tgagtttttt cagtacttcc atgttgggat tagttactag ttcgaatttg CD 301 atacaaattt atattttttg ggaattggtt gggctgtgtt cctatctatt CD 351 aataggattt tggt FT EDITED CDNA CD 1 gttttattgt taagcatagt catggttttt tcaatctacc tgtctattca CD 51 gcaaataaat agcagttctt tttatcaata tgtatggtct tggatcatca CD 101 ataatgattt ttctttagac ttcggatact tgatcgaccc acttacttct CD 151 attatgtTaa tattaatcac tacggttgga attatggttc ttatttatag CD 201 tgataattat atggctcatg atcaaggcta tttgagattt tttgcttata CD 251 tgagtttttt cagtacttcc atgttgggat tagttactag ttcgaatttg CD 301 atacaaattt atattttttg ggaattggtt gggctgtgtt cctatctatt CD 351 aataggattt tggt SQ SEQUENCE 122 AA; VLLLSIVMVF SIYLSIQQIN SSSFYQYVWS WIINNDFSLD FGYLIDPLTS IMLILITTVG IMVLIYSDNY MAHDQGYLRF FAYMSFFSTS MLGLVTSSNL IQIYIFWELV GLCSYLLIGF WX // ID AB098222_1 STANDARD; PRT; 117 AA. AC AB098222; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhD gene for NADH dehydrogenase ND4 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77560.1 FT PROTEIN_NAME : NADH dehydrogenase ND4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 349 FT DIRECTIONS : positive FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 68 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 349 NT; CD 1 aagaaacgtc tgtactcagc tacaaaattt attttgtaca cggcgggggg CD 51 ttctgttttt ctcttaatgg gagttttggg tcttgcttta tatggttcta CD 101 atgaaccaac attaaatttt gaaacatCag ttaatcagtc atatcctgtg CD 151 gttttagaaa taatattcta tattggattt tttattgctt ttgctgtcaa CD 201 atCgcccatt atccccctac acacatggtt accagatacc catggagaag CD 251 cacattacag tacttgtatg cttctagccg gaattttatt aaaaatggga CD 301 gcgtatggat taattcgaat caatatggaa ttattacctc atgcccatt FT EDITED CDNA CD 1 aagaaacgtc tgtactcagc tacaaaattt attttgtaca cggcgggggg CD 51 ttctgttttt ctcttaatgg gagttttggg tcttgcttta tatggttcta CD 101 atgaaccaac attaaatttt gaaacatTag ttaatcagtc atatcctgtg CD 151 gttttagaaa taatattcta tattggattt tttattgctt ttgctgtcaa CD 201 atTgcccatt atccccctac acacatggtt accagatacc catggagaag CD 251 cacattacag tacttgtatg cttctagccg gaattttatt aaaaatggga CD 301 gcgtatggat taattcgaat caatatggaa ttattacctc atgcccatt SQ SEQUENCE 117 AA; KKRLYSATKF ILYTAGGSVF LLMGVLGLAL YGSNEPTLNF ETLVNQSYPV VLEIIFYIGF FIAFAVKLPI IPLHTWLPDT HGEAHYSTCM LLAGILLKMG AYGLIRINME LLPHAHX // ID AB098223_2 STANDARD; PRT; 152 AA. AC AB098223; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris psaC, ndhD genes for PSI 9 kDa protein, NADH OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77562.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 254 - 707 FT DIRECTIONS : positive FT EDITING : 1 T(aCt) -> I(aTt) FT EDITING : 129 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 454 NT; CD 1 aCtacgaatt attttccttg gttaacaata attgtagttt ttccaatatt CD 51 tgcgggttcc ttaattttct ttcttcccca taaaggaaat agggtaatta CD 101 ggtggtatac gatatgtata tgtattttag aactccttct aacgacttat CD 151 gcattttgtt atcatttcca atcggatgat ccattaatcc aactagtgga CD 201 ggattataaa tggatcaatt tttttgattt ccattggaga ttaggaatag CD 251 atggactttc tataggaccc attttattaa caggatttat cactacttta CD 301 gctactttag cggcttggcc agttactcga gattctcgat tattccattt CD 351 tctcatgtta gcaatgtaca gtggtcaaat tggatCattt tcgtctcggg CD 401 accttttact ttttttcatc atgtgggagt tagaattaat tcctgtttat CD 451 ctac FT EDITED CDNA CD 1 aTtacgaatt attttccttg gttaacaata attgtagttt ttccaatatt CD 51 tgcgggttcc ttaattttct ttcttcccca taaaggaaat agggtaatta CD 101 ggtggtatac gatatgtata tgtattttag aactccttct aacgacttat CD 151 gcattttgtt atcatttcca atcggatgat ccattaatcc aactagtgga CD 201 ggattataaa tggatcaatt tttttgattt ccattggaga ttaggaatag CD 251 atggactttc tataggaccc attttattaa caggatttat cactacttta CD 301 gctactttag cggcttggcc agttactcga gattctcgat tattccattt CD 351 tctcatgtta gcaatgtaca gtggtcaaat tggatTattt tcgtctcggg CD 401 accttttact ttttttcatc atgtgggagt tagaattaat tcctgtttat CD 451 ctac SQ SEQUENCE 152 AA; ITNYFPWLTI IVVFPIFAGS LIFFLPHKGN RVIRWYTICI CILELLLTTY AFCYHFQSDD PLIQLVEDYK WINFFDFHWR LGIDGLSIGP ILLTGFITTL ATLAAWPVTR DSRLFHFLML AMYSGQIGLF SSRDLLLFFI MWELELIPVY LX // ID AB098224_1 STANDARD; PRT; 232 AA. AC AB098224; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhB gene for NADH dehydrogenase ND2 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77563.1 FT PROTEIN_NAME : NADH dehydrogenase ND2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 694 FT DIRECTIONS : positive FT EDITING : 23 S(tCa) -> L(tTa) FT EDITING : 129 P(cCa) -> L(cTa) FT EDITING : 169 H(Cat) -> Y(Tat) FT EDITING : 177 S(tCa) -> L(tTa) FT EDITING : 219 P(cCa) -> L(cTa) FT EDITING : 222 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 694 NT; CD 1 gatggaagtt tgattttccc agaatgtatc ctaatttttg gcctaattct CD 51 tcttctgatg atcgattCaa cctctgatca aaaagatata ccttggttat CD 101 atttcatctc ttcaacaagt ttagtaatga gcataacggc cctattgttc CD 151 cgatggagag aagaacctat gattagcttt tcgggaaatt tccaaacgaa CD 201 caatttcaac gaaatctttc aatttcttat tttactatgt tcaactctat CD 251 gtattcctct atccgtagag tacattgaat gtacagaaat ggctataaca CD 301 gagtttctct tattcgtatt aacagctact ctagggggaa tgtttttatg CD 351 cggtgctaac gatttaataa ctatctttgt agcccCagaa tgtttcagtt CD 401 tatgctccta cctattatct ggatatacca agaaagatgt acggtctaat CD 451 gaggctacta tgaaatattt actcatgggt ggggcaagct cttctattct CD 501 ggttCatggt ttctcttggc tatatggttC atccggggga gagattgagc CD 551 ttcaagaaat agtaaacggt cttatcaata cacaaatgta taactcccca CD 601 ggaatttcaa ttgcgctcat attcattacc gtaggaattg ggttcaagct CD 651 ttcccCagcc ccttCtcatc aatggactcc tgacgtatac gaag FT EDITED CDNA CD 1 gatggaagtt tgattttccc agaatgtatc ctaatttttg gcctaattct CD 51 tcttctgatg atcgattTaa cctctgatca aaaagatata ccttggttat CD 101 atttcatctc ttcaacaagt ttagtaatga gcataacggc cctattgttc CD 151 cgatggagag aagaacctat gattagcttt tcgggaaatt tccaaacgaa CD 201 caatttcaac gaaatctttc aatttcttat tttactatgt tcaactctat CD 251 gtattcctct atccgtagag tacattgaat gtacagaaat ggctataaca CD 301 gagtttctct tattcgtatt aacagctact ctagggggaa tgtttttatg CD 351 cggtgctaac gatttaataa ctatctttgt agcccTagaa tgtttcagtt CD 401 tatgctccta cctattatct ggatatacca agaaagatgt acggtctaat CD 451 gaggctacta tgaaatattt actcatgggt ggggcaagct cttctattct CD 501 ggttTatggt ttctcttggc tatatggttT atccggggga gagattgagc CD 551 ttcaagaaat agtaaacggt cttatcaata cacaaatgta taactcccca CD 601 ggaatttcaa ttgcgctcat attcattacc gtaggaattg ggttcaagct CD 651 ttcccTagcc ccttTtcatc aatggactcc tgacgtatac gaag SQ SEQUENCE 232 AA; DGSLIFPECI LIFGLILLLM IDLTSDQKDI PWLYFISSTS LVMSITALLF RWREEPMISF SGNFQTNNFN EIFQFLILLC STLCIPLSVE YIECTEMAIT EFLLFVLTAT LGGMFLCGAN DLITIFVALE CFSLCSYLLS GYTKKDVRSN EATMKYLLMG GASSSILVYG FSWLYGLSGG EIELQEIVNG LINTQMYNSP GISIALIFIT VGIGFKLSLA PFHQWTPDVY EX // ID AB098225_1 STANDARD; PRT; 75 AA. AC AB098225; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhB gene for NADH dehydrogenase ND2 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : ndhB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77564.1 FT PROTEIN_NAME : NADH dehydrogenase ND2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 225 FT DIRECTIONS : positive FT EDITING : 58 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 ctccttacaa gcgttgtttc tatctactat tatctaaaaa taataaagtt CD 51 attaatgact ggacgaaacc aagaaataac ccctcacgtg cgaaattata CD 101 gaagatcccc tttaagatca aacaattcca tcgaattgag tatgattgta CD 151 tgtgtgatag catctactat acCaggaata tcaatgaacc caattattgc CD 201 aattgctcag gatagccttt tttag FT EDITED CDNA CD 1 ctccttacaa gcgttgtttc tatctactat tatctaaaaa taataaagtt CD 51 attaatgact ggacgaaacc aagaaataac ccctcacgtg cgaaattata CD 101 gaagatcccc tttaagatca aacaattcca tcgaattgag tatgattgta CD 151 tgtgtgatag catctactat acTaggaata tcaatgaacc caattattgc CD 201 aattgctcag gatagccttt tttag SQ SEQUENCE 75 AA; LLTSVVSIYY YLKIIKLLMT GRNQEITPHV RNYRRSPLRS NNSIELSMIV CVIASTILGI SMNPIIAIAQ DSLF* // ID AB098226_1 STANDARD; PRT; 158 AA. AC AB098226; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhB gene for NADH dehydrogenase ND2 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77565.1 FT PROTEIN_NAME : NADH dehydrogenase ND2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 473 FT DIRECTIONS : positive FT EDITING : 18 S(tCa) -> L(tTa) FT EDITING : 20 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 473 NT; CD 1 tctcccactc cagtcgttgc ttttctttct gttacttcga aagtagctgc CD 51 ttCagcttCa gccactcgaa ttttcgatat tcctttttat ttctcatcaa CD 101 acgaatggca tcttcttctg gaaatcctag ctattcttag catgatattg CD 151 ggaaatctca ttgctattac tcaaacaagc atgaaacgta tgcttgcata CD 201 ttcgtccata ggccaaatcg gatatgtaat tattggaata attgttggag CD 251 actcaaatga tggatatgca agcatgataa cttatatgct gttctatatc CD 301 tccatgaatc taggaacttt tgcttgcatt gtattatttg gtctacgtac CD 351 cggaactgat aacattcgag attatgcagg attatacaca aaagatcctt CD 401 ttttggctct ctctttagcc ctatgtctct tatccctagg aggtcttcct CD 451 ccactagcag gttttttcgg aaa FT EDITED CDNA CD 1 tctcccactc cagtcgttgc ttttctttct gttacttcga aagtagctgc CD 51 ttTagcttTa gccactcgaa ttttcgatat tcctttttat ttctcatcaa CD 101 acgaatggca tcttcttctg gaaatcctag ctattcttag catgatattg CD 151 ggaaatctca ttgctattac tcaaacaagc atgaaacgta tgcttgcata CD 201 ttcgtccata ggccaaatcg gatatgtaat tattggaata attgttggag CD 251 actcaaatga tggatatgca agcatgataa cttatatgct gttctatatc CD 301 tccatgaatc taggaacttt tgcttgcatt gtattatttg gtctacgtac CD 351 cggaactgat aacattcgag attatgcagg attatacaca aaagatcctt CD 401 ttttggctct ctctttagcc ctatgtctct tatccctagg aggtcttcct CD 451 ccactagcag gttttttcgg aaa SQ SEQUENCE 158 AA; SPTPVVAFLS VTSKVAALAL ATRIFDIPFY FSSNEWHLLL EILAILSMIL GNLIAITQTS MKRMLAYSSI GQIGYVIIGI IVGDSNDGYA SMITYMLFYI SMNLGTFACI VLFGLRTGTD NIRDYAGLYT KDPFLALSLA LCLLSLGGLP PLAGFFGX // ID AB098227_1 STANDARD; PRT; 165 AA. AC AB098227; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhA gene for NADH dehydrogenase ND1 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77566.1 FT PROTEIN_NAME : NADH dehydrogenase ND1 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 494 FT DIRECTIONS : positive FT EDITING : 98 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 494 NT; CD 1 ttggaatcct taaaagaagt ctatgggatc atatggatgc ttttccctat CD 51 tttgactctt gtattaggaa tcacaatagg tgtactagta attgtttggt CD 101 tagaaagaga aatatctgca ggaatacaac aacgtatcgg acctgaatat CD 151 gctggccctt taggaattct tcaagctcta gcagatggga caaaactact CD 201 tttgaaagag aaccttattc catctacagg agatactcgt ttattcagta CD 251 tcggaccatc catagcagta atatccatct ttctaagtta ttCagtaatt CD 301 ccttttggtg atcaccttgt tctagccgat cttagtattg gtgttttttt CD 351 ctggattgcc atttcaagta ttgctcccgt tggacttctt atgtcgggat CD 401 atggatcaaa taataaatat tcttttttag gtggtctacg ggcagctgct CD 451 caatcaatta gttatgaaat accattagct ctatgtgtgt tatc FT EDITED CDNA CD 1 ttggaatcct taaaagaagt ctatgggatc atatggatgc ttttccctat CD 51 tttgactctt gtattaggaa tcacaatagg tgtactagta attgtttggt CD 101 tagaaagaga aatatctgca ggaatacaac aacgtatcgg acctgaatat CD 151 gctggccctt taggaattct tcaagctcta gcagatggga caaaactact CD 201 tttgaaagag aaccttattc catctacagg agatactcgt ttattcagta CD 251 tcggaccatc catagcagta atatccatct ttctaagtta ttTagtaatt CD 301 ccttttggtg atcaccttgt tctagccgat cttagtattg gtgttttttt CD 351 ctggattgcc atttcaagta ttgctcccgt tggacttctt atgtcgggat CD 401 atggatcaaa taataaatat tcttttttag gtggtctacg ggcagctgct CD 451 caatcaatta gttatgaaat accattagct ctatgtgtgt tatc SQ SEQUENCE 165 AA; LESLKEVYGI IWMLFPILTL VLGITIGVLV IVWLEREISA GIQQRIGPEY AGPLGILQAL ADGTKLLLKE NLIPSTGDTR LFSIGPSIAV ISIFLSYLVI PFGDHLVLAD LSIGVFFWIA ISSIAPVGLL MSGYGSNNKY SFLGGLRAAA QSISYEIPLA LCVLS // ID AB098228_1 STANDARD; PRT; 178 AA. AC AB098228; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris ndhA gene for NADH dehydrogenase ND1 subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : ndhA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77567.1 FT PROTEIN_NAME : NADH dehydrogenase ND1 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 534 FT DIRECTIONS : positive FT EDITING : 172 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 534 NT; CD 1 aacagtttaa gtacagttga tatagtggaa gcgcagtcaa aatatggctt CD 51 ttgggggtgg aatttgtggc gtcaacccat cgggtttatc gtttttctaa CD 101 tttcttctct agccgagtgt gaaagattac cttttgattt accagaagca CD 151 gaagaagaat tagtagcagg gtatcaaacc gaatattcag gtatcaaatt CD 201 tggtttattt tacattgctt catatctgaa tctactagtt tcttcattat CD 251 ttgtaacagt tctttatttg ggaggttgga atctttctat tccgtacata CD 301 tttgttcctg agctatttgg cataaataaa aggggtaaag tctttggaac CD 351 actaattggt atctttatca cattagccaa aacttatttg tttttgttca CD 401 ttcctattgc aacaagatgg actttaccga ggctgagaat ggaccaacta CD 451 ttaaatcttg ggtggaaatt tcttttacct atttctctag gtaatctatt CD 501 attgacaacc tcgtCccaac ttctttcact gtaa FT EDITED CDNA CD 1 aacagtttaa gtacagttga tatagtggaa gcgcagtcaa aatatggctt CD 51 ttgggggtgg aatttgtggc gtcaacccat cgggtttatc gtttttctaa CD 101 tttcttctct agccgagtgt gaaagattac cttttgattt accagaagca CD 151 gaagaagaat tagtagcagg gtatcaaacc gaatattcag gtatcaaatt CD 201 tggtttattt tacattgctt catatctgaa tctactagtt tcttcattat CD 251 ttgtaacagt tctttatttg ggaggttgga atctttctat tccgtacata CD 301 tttgttcctg agctatttgg cataaataaa aggggtaaag tctttggaac CD 351 actaattggt atctttatca cattagccaa aacttatttg tttttgttca CD 401 ttcctattgc aacaagatgg actttaccga ggctgagaat ggaccaacta CD 451 ttaaatcttg ggtggaaatt tcttttacct atttctctag gtaatctatt CD 501 attgacaacc tcgtTccaac ttctttcact gtaa SQ SEQUENCE 178 AA; NSLSTVDIVE AQSKYGFWGW NLWRQPIGFI VFLISSLAEC ERLPFDLPEA EEELVAGYQT EYSGIKFGLF YIASYLNLLV SSLFVTVLYL GGWNLSIPYI FVPELFGINK RGKVFGTLIG IFITLAKTYL FLFIPIATRW TLPRLRMDQL LNLGWKFLLP ISLGNLLLTT SFQLLSL* // ID AB098229_1 STANDARD; PRT; 47 AA. AC AB098229; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris atpF gene for ATP synthase I subunit, partial OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : atpF FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77568.1 FT PROTEIN_NAME : ATP synthase I subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 141 FT DIRECTIONS : positive FT EDITING : 31 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 141 NT; CD 1 atgaaaaacg taaccgattc tttcgtttct ttgggccact ggccatctgc CD 51 cgggagtttc gggtttaata ccgatatttt agcaacaaat cCaataaatc CD 101 taagtgtagt gcttggtgta ttgatttttt ttggaaaggg a FT EDITED CDNA CD 1 atgaaaaacg taaccgattc tttcgtttct ttgggccact ggccatctgc CD 51 cgggagtttc gggtttaata ccgatatttt agcaacaaat cTaataaatc CD 101 taagtgtagt gcttggtgta ttgatttttt ttggaaaggg a SQ SEQUENCE 47 AA; MKNVTDSFVS LGHWPSAGSF GFNTDILATN LINLSVVLGV LIFFGKG // ID AB098230_1 STANDARD; PRT; 170 AA. AC AB098230; DT Tue Jul 21 07:00:07 2009 DE Nicotiana sylvestris atpA gene for ATP synthase alpha subunit, OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : atpA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77569.1 FT PROTEIN_NAME : ATP synthase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 509 FT DIRECTIONS : positive FT EDITING : 87 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 509 NT; CD 1 gcagtagcca cagatacgat cctcaatcaa caaggtcaaa atgtaatatg CD 51 tgtttatgta gctattgggc aaaaagcatc ttctgtggcc caggtcgtaa CD 101 ctactttaca ggaaagggga gcgatggaat acactattgt ggtagccgaa CD 151 acggcagatt cccctgctac attacaatac cttgctcctt atacaggagc CD 201 agctctggct gaatatttta tgtatcgtga acgacacact ttaatcattt CD 251 atgatgatcC ctccaaacaa gcgcaagctt atcgccaaat gtctcttcta CD 301 ttacgaagac cgcccggtcg tgaagcttat ccaggagatg ttttttattt CD 351 gcattcacgc cttttggaaa gagccgctaa attaagttct agtttaggtg CD 401 aaggaagtat gaccgcctta ccaatagttg aaacccaatc gggagatgtt CD 451 tcggcttata ttcctactaa tgtaatttcc attactgatg gacaaatctt CD 501 cttatccgc FT EDITED CDNA CD 1 gcagtagcca cagatacgat cctcaatcaa caaggtcaaa atgtaatatg CD 51 tgtttatgta gctattgggc aaaaagcatc ttctgtggcc caggtcgtaa CD 101 ctactttaca ggaaagggga gcgatggaat acactattgt ggtagccgaa CD 151 acggcagatt cccctgctac attacaatac cttgctcctt atacaggagc CD 201 agctctggct gaatatttta tgtatcgtga acgacacact ttaatcattt CD 251 atgatgatcT ctccaaacaa gcgcaagctt atcgccaaat gtctcttcta CD 301 ttacgaagac cgcccggtcg tgaagcttat ccaggagatg ttttttattt CD 351 gcattcacgc cttttggaaa gagccgctaa attaagttct agtttaggtg CD 401 aaggaagtat gaccgcctta ccaatagttg aaacccaatc gggagatgtt CD 451 tcggcttata ttcctactaa tgtaatttcc attactgatg gacaaatctt CD 501 cttatccgc SQ SEQUENCE 170 AA; AVATDTILNQ QGQNVICVYV AIGQKASSVA QVVTTLQERG AMEYTIVVAE TADSPATLQY LAPYTGAALA EYFMYRERHT LIIYDDLSKQ AQAYRQMSLL LRRPPGREAY PGDVFYLHSR LLERAAKLSS SLGEGSMTAL PIVETQSGDV SAYIPTNVIS ITDGQIFLSA // ID AB098231_1 STANDARD; PRT; 237 AA. AC AB098231; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rps2 gene for ribosomal protein S2, OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT Full length CDS FT GENE : rps2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77570.1 FT PROTEIN_NAME : ribosomal protein S2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 711 FT DIRECTIONS : positive FT EDITING : 45 T(aCa) -> I(aTa) FT EDITING : 83 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 711 NT; CD 1 atgacaagaa gatattggaa cataaatttg gaagagatga tggaggcagg CD 51 agttcatttt ggtcatggta ctaggaaatg gaatcctaaa atggcgcctt CD 101 atatctctgc aaagcgtaag ggtattcata ttaCaaatct tactagaact CD 151 gctcgttttt tatcagaagc ttgtgattta gtttttgacg cagcaagtag CD 201 gggaaaacaa ttcttaattg ttggtaccaa aaataaagca gctgattCag CD 251 tagagtgggc tgcaataagg gcccggtgtc attatgttaa taaaaaatgg CD 301 cttggcggta tgttaacgaa ttggtccact accgaaacaa gacttcataa CD 351 gttcagggac ttgagaatgg aacaaaaaac agggagactc aaccgtctcc CD 401 cgaaaagaga tgcagctatg ttgaaaagac aattatctcg cttgcaaaca CD 451 tatctgggcg ggattaaata tatgacaggg gtacccgata ttgtaatcat CD 501 cgttgatcag cacgaagaat atacggccct gcgagagtgt attactttag CD 551 gaattccaac aatttattta accgatacaa attgtgaccc cgatctcgca CD 601 gatatttcaa ttccagcgaa tgatgacgcc atatcctcaa tccgattaat CD 651 tcttaacaaa ttagtattcg caatttgtga gggtcgttct agctatataa CD 701 gaaatccttg a FT EDITED CDNA CD 1 atgacaagaa gatattggaa cataaatttg gaagagatga tggaggcagg CD 51 agttcatttt ggtcatggta ctaggaaatg gaatcctaaa atggcgcctt CD 101 atatctctgc aaagcgtaag ggtattcata ttaTaaatct tactagaact CD 151 gctcgttttt tatcagaagc ttgtgattta gtttttgacg cagcaagtag CD 201 gggaaaacaa ttcttaattg ttggtaccaa aaataaagca gctgattTag CD 251 tagagtgggc tgcaataagg gcccggtgtc attatgttaa taaaaaatgg CD 301 cttggcggta tgttaacgaa ttggtccact accgaaacaa gacttcataa CD 351 gttcagggac ttgagaatgg aacaaaaaac agggagactc aaccgtctcc CD 401 cgaaaagaga tgcagctatg ttgaaaagac aattatctcg cttgcaaaca CD 451 tatctgggcg ggattaaata tatgacaggg gtacccgata ttgtaatcat CD 501 cgttgatcag cacgaagaat atacggccct gcgagagtgt attactttag CD 551 gaattccaac aatttattta accgatacaa attgtgaccc cgatctcgca CD 601 gatatttcaa ttccagcgaa tgatgacgcc atatcctcaa tccgattaat CD 651 tcttaacaaa ttagtattcg caatttgtga gggtcgttct agctatataa CD 701 gaaatccttg a SQ SEQUENCE 237 AA; MTRRYWNINL EEMMEAGVHF GHGTRKWNPK MAPYISAKRK GIHIINLTRT ARFLSEACDL VFDAASRGKQ FLIVGTKNKA ADLVEWAAIR ARCHYVNKKW LGGMLTNWST TETRLHKFRD LRMEQKTGRL NRLPKRDAAM LKRQLSRLQT YLGGIKYMTG VPDIVIIVDQ HEEYTALREC ITLGIPTIYL TDTNCDPDLA DISIPANDDA ISSIRLILNK LVFAICEGRS SYIRNP* // ID AB098232_1 STANDARD; PRT; 100 AA. AC AB098232; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rps14 gene for ribosomal protein S14, OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : rps14 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77571.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 300 FT DIRECTIONS : positive FT EDITING : 27 S(tCa) -> L(tTa) FT EDITING : 50 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 300 NT; CD 1 atggcaagga aaagtttgat tcagagggag aagaagaggc aaaaattgga CD 51 acagaaatat cattcgattc gtcgatcctC aaaaaaagaa ataagcaagg CD 101 ttccgtcgtt gagtgacaaa tgggaaattt atggaaagtt acaatcccCa CD 151 ccacggaata gtgcacctac acgccttcat cgacgttgtt ttttgaccgg CD 201 aaggccgaga gctaactatc gggactttgg actatccgga cacatacttc CD 251 gtgaaatggt tcatgcatgt ttgttgccag gagcaacaag atcaagttgg FT EDITED CDNA CD 1 atggcaagga aaagtttgat tcagagggag aagaagaggc aaaaattgga CD 51 acagaaatat cattcgattc gtcgatcctT aaaaaaagaa ataagcaagg CD 101 ttccgtcgtt gagtgacaaa tgggaaattt atggaaagtt acaatcccTa CD 151 ccacggaata gtgcacctac acgccttcat cgacgttgtt ttttgaccgg CD 201 aaggccgaga gctaactatc gggactttgg actatccgga cacatacttc CD 251 gtgaaatggt tcatgcatgt ttgttgccag gagcaacaag atcaagttgg SQ SEQUENCE 100 AA; MARKSLIQRE KKRQKLEQKY HSIRRSLKKE ISKVPSLSDK WEIYGKLQSL PRNSAPTRLH RRCFLTGRPR ANYRDFGLSG HILREMVHAC LLPGATRSSW // ID AB098233_1 STANDARD; PRT; 110 AA. AC AB098233; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rpoC2 gene for RNA polymerase beta'' OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoC2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77572.1 FT PROTEIN_NAME : RNA polymerase beta'' subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 329 FT DIRECTIONS : positive FT EDITING : 46 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 329 NT; CD 1 atctctttgg ttaataaaat ccaacaggtt tatcgctccc agggggtgca CD 51 gattcataat aggcatatag aaattattgt acgtcaaata acatcaaaag CD 101 tgttggtttc agaagatgga atgtctaatg ttttttCacc cggagaactt CD 151 attggattgt tgcgagcaga acgaatgggg cgcgctttgg aagaagcgat CD 201 ctgttaccga gtcgtcttat tgggaataac aagagcatct ctcaatactc CD 251 aaagtttcat atctgaagcg agttttcaag agactgctcg agttttagca CD 301 aaagcggctc ttcggggtcg tatcgattg FT EDITED CDNA CD 1 atctctttgg ttaataaaat ccaacaggtt tatcgctccc agggggtgca CD 51 gattcataat aggcatatag aaattattgt acgtcaaata acatcaaaag CD 101 tgttggtttc agaagatgga atgtctaatg ttttttTacc cggagaactt CD 151 attggattgt tgcgagcaga acgaatgggg cgcgctttgg aagaagcgat CD 201 ctgttaccga gtcgtcttat tgggaataac aagagcatct ctcaatactc CD 251 aaagtttcat atctgaagcg agttttcaag agactgctcg agttttagca CD 301 aaagcggctc ttcggggtcg tatcgattg SQ SEQUENCE 110 AA; ISLVNKIQQV YRSQGVQIHN RHIEIIVRQI TSKVLVSEDG MSNVFLPGEL IGLLRAERMG RALEEAICYR VVLLGITRAS LNTQSFISEA SFQETARVLA KAALRGRIDX // ID AB098234_1 STANDARD; PRT; 150 AA. AC AB098234; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rpoC1 gene for RNA polymerase beta' OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoC1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77573.1 FT PROTEIN_NAME : RNA polymerase beta' subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 449 FT DIRECTIONS : positive FT EDITING : 21 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 449 NT; CD 1 atgaataata atttttcttc tatgatcgat cgatataaac atcaacagct CD 51 ccgaattgga tCagtttctc ctcaacaaat aagtgcttgg gccactaaaa CD 101 tcctgcctaa tggagagata gttggagagg taacaaaacc ctatactttt CD 151 cattacaaaa ctaacaaacc ggaaaaagat ggattatttt gtgaaagaat CD 201 ttttggtcct ataaaaagcg gaatttgtgc ttgtggaaat tatcgagtaa CD 251 tcggagatga aaaagaagac ccgaaatttt gtgaacaatg cggggtcgaa CD 301 tttgttgatt ctcggatacg aaggtatcaa atgggctata tcaaactcgc CD 351 atgcccagta acccatgtgt ggtatttaaa acgtcttcct agttatattg CD 401 cgaatctttt agataaacct cttaaagaat tagaaggcct agtatactg FT EDITED CDNA CD 1 atgaataata atttttcttc tatgatcgat cgatataaac atcaacagct CD 51 ccgaattgga tTagtttctc ctcaacaaat aagtgcttgg gccactaaaa CD 101 tcctgcctaa tggagagata gttggagagg taacaaaacc ctatactttt CD 151 cattacaaaa ctaacaaacc ggaaaaagat ggattatttt gtgaaagaat CD 201 ttttggtcct ataaaaagcg gaatttgtgc ttgtggaaat tatcgagtaa CD 251 tcggagatga aaaagaagac ccgaaatttt gtgaacaatg cggggtcgaa CD 301 tttgttgatt ctcggatacg aaggtatcaa atgggctata tcaaactcgc CD 351 atgcccagta acccatgtgt ggtatttaaa acgtcttcct agttatattg CD 401 cgaatctttt agataaacct cttaaagaat tagaaggcct agtatactg SQ SEQUENCE 150 AA; MNNNFSSMID RYKHQQLRIG LVSPQQISAW ATKILPNGEI VGEVTKPYTF HYKTNKPEKD GLFCERIFGP IKSGICACGN YRVIGDEKED PKFCEQCGVE FVDSRIRRYQ MGYIKLACPV THVWYLKRLP SYIANLLDKP LKELEGLVYX // ID AB098235_1 STANDARD; PRT; 146 AA. AC AB098235; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rpoB gene for RNA polymerase beta OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77574.1 FT PROTEIN_NAME : RNA polymerase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 437 FT DIRECTIONS : positive FT EDITING : 94 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 437 NT; CD 1 gattcggggg ctcttgctat agccgaacgc gagggaaggg tcgtttatac CD 51 caatactgac aagattcttt tagcaggtaa tggagatatt ctaagcattc CD 101 cattagttat atatcaacgt tccaataaaa atacttgtat gcatcaaaaa CD 151 ctccaggttc ctcggggtaa atgcattaaa aagggacaaa ttttagcgga CD 201 tggtgctgct acggttggtg gcgaacttgc tttggggaaa aacgtattag CD 251 tagcttatat gccgtgggag ggttacaatt Ctgaagatgc agtacttatt CD 301 agcgagcgtt tggtatatga agatatttat acttcttttc acatacggaa CD 351 atatgaaatt cagactcatg tgacaagcca aggccctgaa aaagtaacta CD 401 atgaaatacc gcatttagaa gcccatttac tccgcaa FT EDITED CDNA CD 1 gattcggggg ctcttgctat agccgaacgc gagggaaggg tcgtttatac CD 51 caatactgac aagattcttt tagcaggtaa tggagatatt ctaagcattc CD 101 cattagttat atatcaacgt tccaataaaa atacttgtat gcatcaaaaa CD 151 ctccaggttc ctcggggtaa atgcattaaa aagggacaaa ttttagcgga CD 201 tggtgctgct acggttggtg gcgaacttgc tttggggaaa aacgtattag CD 251 tagcttatat gccgtgggag ggttacaatt Ttgaagatgc agtacttatt CD 301 agcgagcgtt tggtatatga agatatttat acttcttttc acatacggaa CD 351 atatgaaatt cagactcatg tgacaagcca aggccctgaa aaagtaacta CD 401 atgaaatacc gcatttagaa gcccatttac tccgcaa SQ SEQUENCE 146 AA; DSGALAIAER EGRVVYTNTD KILLAGNGDI LSIPLVIYQR SNKNTCMHQK LQVPRGKCIK KGQILADGAA TVGGELALGK NVLVAYMPWE GYNFEDAVLI SERLVYEDIY TSFHIRKYEI QTHVTSQGPE KVTNEIPHLE AHLLRX // ID AB098236_1 STANDARD; PRT; 129 AA. AC AB098236; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rpoB gene for RNA polymerase beta OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77575.1 FT PROTEIN_NAME : RNA polymerase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 385 FT DIRECTIONS : positive FT EDITING : 3 S(tCt) -> F(tTt) FT EDITING : 48 S(tCa) -> L(tTa) FT EDITING : 74 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 385 NT; CD 1 ggaacttCta tagtcaatgg aatatataga attgtgatca atcaaatatt CD 51 gcaaagtccc ggtatttatt accgatcaga attggaccat aacggaattt CD 101 cggtctatac cggcaccata atatcagatt ggggaggaag atCagaatta CD 151 gaaattgata gaaaagcaag gatatgggct cgtgtaagta ggaaacaaaa CD 201 aatatctatt ctagttctat Catcagctat gggtttgaat ctaagagaaa CD 251 ttctagaaaa tgtttgctat cctgaaattt ttttgtcttt tctgagtgat CD 301 aaggagagaa aaaaaattgg gtcaaaagaa aatgccattt tggagtttta CD 351 tcaacaattt gcttgtgtag gtggcgatcc ggtat FT EDITED CDNA CD 1 ggaacttTta tagtcaatgg aatatataga attgtgatca atcaaatatt CD 51 gcaaagtccc ggtatttatt accgatcaga attggaccat aacggaattt CD 101 cggtctatac cggcaccata atatcagatt ggggaggaag atTagaatta CD 151 gaaattgata gaaaagcaag gatatgggct cgtgtaagta ggaaacaaaa CD 201 aatatctatt ctagttctat Tatcagctat gggtttgaat ctaagagaaa CD 251 ttctagaaaa tgtttgctat cctgaaattt ttttgtcttt tctgagtgat CD 301 aaggagagaa aaaaaattgg gtcaaaagaa aatgccattt tggagtttta CD 351 tcaacaattt gcttgtgtag gtggcgatcc ggtat SQ SEQUENCE 129 AA; GTFIVNGIYR IVINQILQSP GIYYRSELDH NGISVYTGTI ISDWGGRLEL EIDRKARIWA RVSRKQKISI LVLLSAMGLN LREILENVCY PEIFLSFLSD KERKKIGSKE NAILEFYQQF ACVGGDPVX // ID AB098237_1 STANDARD; PRT; 78 AA. AC AB098237; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rpoA gene for RNA polymerase alpha OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : rpoA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77576.1 FT PROTEIN_NAME : RNA polymerase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 233 FT DIRECTIONS : positive FT EDITING : 32 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 233 NT; CD 1 tttcctttat ccccttttac ctttcatgat aaattggcta aactcataaa CD 51 aaacaaaaaa aaaatagcat tgaaatcgat ttttattgac caatCagaat CD 101 tgccttccag gatctataat tgcctcaaaa tgtccaatat atatacattg CD 151 ttggaccttt tgaataacag ccaagaagat cttatgaaaa ttgaacattt CD 201 tcgtagcgaa gatgtaaaac agatattggg cat FT EDITED CDNA CD 1 tttcctttat ccccttttac ctttcatgat aaattggcta aactcataaa CD 51 aaacaaaaaa aaaatagcat tgaaatcgat ttttattgac caatTagaat CD 101 tgccttccag gatctataat tgcctcaaaa tgtccaatat atatacattg CD 151 ttggaccttt tgaataacag ccaagaagat cttatgaaaa ttgaacattt CD 201 tcgtagcgaa gatgtaaaac agatattggg cat SQ SEQUENCE 78 AA; FPLSPFTFHD KLAKLIKNKK KIALKSIFID QLELPSRIYN CLKMSNIYTL LDLLNNSQED LMKIEHFRSE DVKQILGX // ID AB098238_1 STANDARD; PRT; 71 AA. AC AB098238; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis rpl20 gene for ribosomal protein L20, OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : rpl20 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77577.1 FT PROTEIN_NAME : ribosomal protein L20 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 213 FT DIRECTIONS : positive FT EDITING : 45 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 213 NT; CD 1 cgtttgtgga tcactcggat aaacgcagta attcgcgaaa ggggagtatc CD 51 ctatagttat agtagattaa tacacgatct gtacaagaga cagttgcttc CD 101 ttaaccgtaa aatacttgca caaatagcta tatCaaatag gaattgtctt CD 151 tatatgattt cgaacgaaat cataaaggaa gtagattgga aagaatccac CD 201 cagaataatt taa FT EDITED CDNA CD 1 cgtttgtgga tcactcggat aaacgcagta attcgcgaaa ggggagtatc CD 51 ctatagttat agtagattaa tacacgatct gtacaagaga cagttgcttc CD 101 ttaaccgtaa aatacttgca caaatagcta tatTaaatag gaattgtctt CD 151 tatatgattt cgaacgaaat cataaaggaa gtagattgga aagaatccac CD 201 cagaataatt taa SQ SEQUENCE 71 AA; RLWITRINAV IRERGVSYSY SRLIHDLYKR QLLLNRKILA QIAILNRNCL YMISNEIIKE VDWKESTRII * // ID AB098239_1 STANDARD; PRT; 39 AA. AC AB098239; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis psbL gene for PSII L-protein, complete OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77578.1 FT PROTEIN_NAME : PSII L-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 145 - 261 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AB098240_1 STANDARD; PRT; 84 AA. AC AB098240; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis psbE gene for PSII cytochrome b559 8 kDa OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT Full length CDS FT GENE : psbE FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77579.1 FT PROTEIN_NAME : PSII cytochrome b559 8 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 252 FT DIRECTIONS : positive FT EDITING : 72 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 252 NT; CD 1 atgtctggaa gcacaggaga acgttcgttt gctgatatta ttaccagtat CD 51 tcgatactgg gtcattcata gcattactat accttcccta ttcattgcgg CD 101 gttggttatt tgtcagcacc ggtttagctt acgatgtgtt tggaagccct CD 151 cggccaaacg agtattttac agagagccga caaggaattc cattaataac CD 201 tggccgtttt gatCctttgg aacaactcga tgaatttagt agatcgtttt CD 251 ag FT EDITED CDNA CD 1 atgtctggaa gcacaggaga acgttcgttt gctgatatta ttaccagtat CD 51 tcgatactgg gtcattcata gcattactat accttcccta ttcattgcgg CD 101 gttggttatt tgtcagcacc ggtttagctt acgatgtgtt tggaagccct CD 151 cggccaaacg agtattttac agagagccga caaggaattc cattaataac CD 201 tggccgtttt gatTctttgg aacaactcga tgaatttagt agatcgtttt CD 251 ag SQ SEQUENCE 84 AA; MSGSTGERSF ADIITSIRYW VIHSITIPSL FIAGWLFVST GLAYDVFGSP RPNEYFTESR QGIPLITGRF DSLEQLDEFS RSF* // ID AB098241_1 STANDARD; PRT; 69 AA. AC AB098241; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis petB gene for cytochrome b6, partial cds. OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : petB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77580.1 FT PROTEIN_NAME : cytochrome b6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 207 FT DIRECTIONS : positive FT EDITING : 57 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 207 NT; CD 1 gtgaaaatag taacaggtgt ccctgacgct attcctgtaa taggatcacc CD 51 cttggtcgaa ttattgcgcg gaagcgctag tgtgggacaa tctactttga CD 101 ctcgttttta tagtttacac acttttgtat tgccgcttct tactgccgta CD 151 tttatgttaa tgcactttcC aatgatacgt aaacaaggta tttctgggcc CD 201 tttatag FT EDITED CDNA CD 1 gtgaaaatag taacaggtgt ccctgacgct attcctgtaa taggatcacc CD 51 cttggtcgaa ttattgcgcg gaagcgctag tgtgggacaa tctactttga CD 101 ctcgttttta tagtttacac acttttgtat tgccgcttct tactgccgta CD 151 tttatgttaa tgcactttcT aatgatacgt aaacaaggta tttctgggcc CD 201 tttatag SQ SEQUENCE 69 AA; VKIVTGVPDA IPVIGSPLVE LLRGSASVGQ STLTRFYSLH TFVLPLLTAV FMLMHFLMIR KQGISGPL* // ID AB098242_1 STANDARD; PRT; 122 AA. AC AB098242; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhF gene for NADH dehydrogenase ND 5 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhF FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77581.1 FT PROTEIN_NAME : NADH dehydrogenase ND 5 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 364 FT DIRECTIONS : positive FT EDITING : 53 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 364 NT; CD 1 gttttattgt taagcatagt catggttttt tcaatctacc tgtctattca CD 51 gcaaataaat agccgttctt tttatcaata tgtatggtct tggatcatca CD 101 ataatgattt ttctttagag ttcggatact tgatcgaccc acttacttct CD 151 attatgtCaa tattaatcac tactgttgga attatggttc ttatttatag CD 201 tgataattat atggctcatg atcaaggcta tttgagattt tttgcttata CD 251 tgagtttttt cagtacttcc atgttgggat tagttactag ttcgaatttg CD 301 atacaaattt atattttttg ggaattggtt gggctgtgtt cctatctatt CD 351 aataggattt tggt FT EDITED CDNA CD 1 gttttattgt taagcatagt catggttttt tcaatctacc tgtctattca CD 51 gcaaataaat agccgttctt tttatcaata tgtatggtct tggatcatca CD 101 ataatgattt ttctttagag ttcggatact tgatcgaccc acttacttct CD 151 attatgtTaa tattaatcac tactgttgga attatggttc ttatttatag CD 201 tgataattat atggctcatg atcaaggcta tttgagattt tttgcttata CD 251 tgagtttttt cagtacttcc atgttgggat tagttactag ttcgaatttg CD 301 atacaaattt atattttttg ggaattggtt gggctgtgtt cctatctatt CD 351 aataggattt tggt SQ SEQUENCE 122 AA; VLLLSIVMVF SIYLSIQQIN SRSFYQYVWS WIINNDFSLE FGYLIDPLTS IMLILITTVG IMVLIYSDNY MAHDQGYLRF FAYMSFFSTS MLGLVTSSNL IQIYIFWELV GLCSYLLIGF WX // ID AB098243_1 STANDARD; PRT; 116 AA. AC AB098243; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhD gene for NADH dehydrogenase ND 4 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77582.1 FT PROTEIN_NAME : NADH dehydrogenase ND 4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 348 FT DIRECTIONS : positive FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 68 S(tCg) -> L(tTg) FT CODON_START : 2 CL CDNALEN 348 NT; CD 1 aaagaaacgt ctgtactcag ctacaaaatt tattttgtac acggcggggg CD 51 gttctgtttt tctcttaatg ggagttttgg gtgttgcttt atatggttct CD 101 aatgaaccaa cattaaattt tgaaacatCa gttaatcagt catatcctgt CD 151 ggttttagaa ataatattct atattggatt ttttattgct tttgctgtca CD 201 aatCgcccat tatcccccta cacacatggt taccagatac ccatggagaa CD 251 gcacattaca gtacttgtat gcttctagcc ggaatcttat taaaaatggg CD 301 agcgtatgga ttaattcgaa tcaatatgga attattacct catgccca FT EDITED CDNA CD 1 aaagaaacgt ctgtactcag ctacaaaatt tattttgtac acggcggggg CD 51 gttctgtttt tctcttaatg ggagttttgg gtgttgcttt atatggttct CD 101 aatgaaccaa cattaaattt tgaaacatTa gttaatcagt catatcctgt CD 151 ggttttagaa ataatattct atattggatt ttttattgct tttgctgtca CD 201 aatTgcccat tatcccccta cacacatggt taccagatac ccatggagaa CD 251 gcacattaca gtacttgtat gcttctagcc ggaatcttat taaaaatggg CD 301 agcgtatgga ttaattcgaa tcaatatgga attattacct catgccca SQ SEQUENCE 116 AA; KKRLYSATKF ILYTAGGSVF LLMGVLGVAL YGSNEPTLNF ETLVNQSYPV VLEIIFYIGF FIAFAVKLPI IPLHTWLPDT HGEAHYSTCM LLAGILLKMG AYGLIRINME LLPHAX // ID AB098244_2 STANDARD; PRT; 157 AA. AC AB098244; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis psaC, ndhD genes for PSI 9 kDa protein, OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77584.1 FT PROTEIN_NAME : putative NADH dehydrogenase ND 4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 246 - 714 FT DIRECTIONS : positive FT EDITING : 137 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 469 NT; CD 1 atggtccaag tgtatcttgt ctttactacg aattattttc cttggttaac CD 51 aataattgta gtttttccaa tatttgcggg ttccttaatt ttctttcttc CD 101 cccataaagg aaatagggta attaggtggt ataccatatg tatatgtatt CD 151 ttagaactcc ttctaacaac ttatgcattt tgttatcatt tccaatcgga CD 201 tgatccatta atccaactag tggaggatta taaatggatc aatttttttg CD 251 atttccattg gagattagga atagatggac tttctatagg acccatttta CD 301 ttaacaggat ttatcactac tttagctact ttagcggctt ggccaattac CD 351 tcgagattct cgattattcc attttctcat gttagcaatg tacagtggtc CD 401 aaattggatC attttcgtct cgggaccttt tacttttttt catcatgtgg CD 451 gagttagaat taattcctg FT EDITED CDNA CD 1 atggtccaag tgtatcttgt ctttactacg aattattttc cttggttaac CD 51 aataattgta gtttttccaa tatttgcggg ttccttaatt ttctttcttc CD 101 cccataaagg aaatagggta attaggtggt ataccatatg tatatgtatt CD 151 ttagaactcc ttctaacaac ttatgcattt tgttatcatt tccaatcgga CD 201 tgatccatta atccaactag tggaggatta taaatggatc aatttttttg CD 251 atttccattg gagattagga atagatggac tttctatagg acccatttta CD 301 ttaacaggat ttatcactac tttagctact ttagcggctt ggccaattac CD 351 tcgagattct cgattattcc attttctcat gttagcaatg tacagtggtc CD 401 aaattggatT attttcgtct cgggaccttt tacttttttt catcatgtgg CD 451 gagttagaat taattcctg SQ SEQUENCE 157 AA; MVQVYLVFTT NYFPWLTIIV VFPIFAGSLI FFLPHKGNRV IRWYTICICI LELLLTTYAF CYHFQSDDPL IQLVEDYKWI NFFDFHWRLG IDGLSIGPIL LTGFITTLAT LAAWPITRDS RLFHFLMLAM YSGQIGLFSS RDLLLFFIMW ELELIPX // ID AB098245_1 STANDARD; PRT; 74 AA. AC AB098245; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhB gene for NADH dehydrogenase ND 2 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : ndhB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77585.1 FT PROTEIN_NAME : NADH dehydrogenase ND 2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 222 FT DIRECTIONS : positive FT EDITING : 57 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 222 NT; CD 1 cttacaagcg ttgtttctat ctactattat ctaaaaataa taaagttatt CD 51 aatgactgga cgaaaccaag aaataacccc tcacgtgcga aattatcgaa CD 101 gatccccttt aagatcaaac aattccatcg aattgagtat gattgtatgt CD 151 gtgatagcat ctactatacC aggaatatca atgaacccga ttattgcaat CD 201 tgctcaggat agcctttttt ag FT EDITED CDNA CD 1 cttacaagcg ttgtttctat ctactattat ctaaaaataa taaagttatt CD 51 aatgactgga cgaaaccaag aaataacccc tcacgtgcga aattatcgaa CD 101 gatccccttt aagatcaaac aattccatcg aattgagtat gattgtatgt CD 151 gtgatagcat ctactatacT aggaatatca atgaacccga ttattgcaat CD 201 tgctcaggat agcctttttt ag SQ SEQUENCE 74 AA; LTSVVSIYYY LKIIKLLMTG RNQEITPHVR NYRRSPLRSN NSIELSMIVC VIASTILGIS MNPIIAIAQD SLF* // ID AB098246_1 STANDARD; PRT; 159 AA. AC AB098246; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhB gene for NADH dehydrogenase ND 2 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77586.1 FT PROTEIN_NAME : NADH dehydrogenase ND 2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 477 FT DIRECTIONS : positive FT EDITING : 7 A(gCc) -> V(gTc) FT CODON_START : 1 CL CDNALEN 477 NT; CD 1 tctcccactc cagtcgttgC ctttctttct gttacttcga aagtagctgc CD 51 ttcagcttca gccactcgaa ttttcgatat tcctttttat ttctcatcaa CD 101 acgaatggca tcttcttctg gaaatcctag ctattcttag catgatattg CD 151 ggaaatctca ttgctattac tcaaacaagc atgaaacgta tgcttgcata CD 201 ttcgtccata ggccaaatcg gatatgtaat tattggaata attgttggag CD 251 actcaaatga tggatatgca agcatgataa cttatatgct gttctatatc CD 301 tccatgaatc taggaacttt tgcttgcatt gtattatttg gtctacgtac CD 351 cggaactgat aacattcgag attatgcagg attatacaca aaagatcctt CD 401 ttttggctct ctctttagcc ctatgtctct tatccctagg aggtcttcct CD 451 ccactagcag gttttttcgg aaaactc FT EDITED CDNA CD 1 tctcccactc cagtcgttgT ctttctttct gttacttcga aagtagctgc CD 51 ttcagcttca gccactcgaa ttttcgatat tcctttttat ttctcatcaa CD 101 acgaatggca tcttcttctg gaaatcctag ctattcttag catgatattg CD 151 ggaaatctca ttgctattac tcaaacaagc atgaaacgta tgcttgcata CD 201 ttcgtccata ggccaaatcg gatatgtaat tattggaata attgttggag CD 251 actcaaatga tggatatgca agcatgataa cttatatgct gttctatatc CD 301 tccatgaatc taggaacttt tgcttgcatt gtattatttg gtctacgtac CD 351 cggaactgat aacattcgag attatgcagg attatacaca aaagatcctt CD 401 ttttggctct ctctttagcc ctatgtctct tatccctagg aggtcttcct CD 451 ccactagcag gttttttcgg aaaactc SQ SEQUENCE 159 AA; SPTPVVVFLS VTSKVAASAS ATRIFDIPFY FSSNEWHLLL EILAILSMIL GNLIAITQTS MKRMLAYSSI GQIGYVIIGI IVGDSNDGYA SMITYMLFYI SMNLGTFACI VLFGLRTGTD NIRDYAGLYT KDPFLALSLA LCLLSLGGLP PLAGFFGKL // ID AB098247_1 STANDARD; PRT; 233 AA. AC AB098247; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhB gene for NADH dehydrogenase ND 2 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77587.1 FT PROTEIN_NAME : NADH dehydrogenase ND 2 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 697 FT DIRECTIONS : positive FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 130 P(cCa) -> L(cTa) FT EDITING : 170 H(Cat) -> Y(Tat) FT EDITING : 178 S(tCa) -> L(tTa) FT EDITING : 220 P(cCa) -> L(cTa) FT EDITING : 223 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 697 NT; CD 1 ttcgatggaa gtttgatttt cccagaatgt atcctaattt ttggcctaat CD 51 tcttcttctg atgatcgatt Caacctctga tcaaaaagat ataccttggt CD 101 tatatttcat ctcttcaaca agtttagtaa tgagcataac ggccctattg CD 151 ttccgatgga gagaagaacc tatgattagc ttttcgggaa atttccaaac CD 201 gaacaatttc aacgaaatct ttcaatttct tattttacta tgttcaactc CD 251 tatgtattcc tctatccgta gagtacattg aatgtacaga aatggctata CD 301 acagagtttc tcttattcgt attaacagct actctagggg gaatgttttt CD 351 atgcggtgct aacgatttaa taactatctt tgtagcccCa gaatgtttca CD 401 gtttatgctc ctacctatta tctggatata ccaagaaaga tgtacggtct CD 451 aatgaggcta ctatgaaata tttactcatg ggtggggcaa gctcttctat CD 501 tctggttCat ggtttctctt ggctatatgg ttCatccggg ggagagattg CD 551 agcttcaaga aatagtaaac ggtcttatca atacacaaat gtataactcc CD 601 ccaggaattt caattgcgct catattcatt accgtaggaa ttgggttcaa CD 651 gctttcccCa gccccttCtc atcaatggac tcctgacgta tacgaag FT EDITED CDNA CD 1 ttcgatggaa gtttgatttt cccagaatgt atcctaattt ttggcctaat CD 51 tcttcttctg atgatcgatt Taacctctga tcaaaaagat ataccttggt CD 101 tatatttcat ctcttcaaca agtttagtaa tgagcataac ggccctattg CD 151 ttccgatgga gagaagaacc tatgattagc ttttcgggaa atttccaaac CD 201 gaacaatttc aacgaaatct ttcaatttct tattttacta tgttcaactc CD 251 tatgtattcc tctatccgta gagtacattg aatgtacaga aatggctata CD 301 acagagtttc tcttattcgt attaacagct actctagggg gaatgttttt CD 351 atgcggtgct aacgatttaa taactatctt tgtagcccTa gaatgtttca CD 401 gtttatgctc ctacctatta tctggatata ccaagaaaga tgtacggtct CD 451 aatgaggcta ctatgaaata tttactcatg ggtggggcaa gctcttctat CD 501 tctggttTat ggtttctctt ggctatatgg ttTatccggg ggagagattg CD 551 agcttcaaga aatagtaaac ggtcttatca atacacaaat gtataactcc CD 601 ccaggaattt caattgcgct catattcatt accgtaggaa ttgggttcaa CD 651 gctttcccTa gccccttTtc atcaatggac tcctgacgta tacgaag SQ SEQUENCE 233 AA; FDGSLIFPEC ILIFGLILLL MIDLTSDQKD IPWLYFISST SLVMSITALL FRWREEPMIS FSGNFQTNNF NEIFQFLILL CSTLCIPLSV EYIECTEMAI TEFLLFVLTA TLGGMFLCGA NDLITIFVAL ECFSLCSYLL SGYTKKDVRS NEATMKYLLM GGASSSILVY GFSWLYGLSG GEIELQEIVN GLINTQMYNS PGISIALIFI TVGIGFKLSL APFHQWTPDV YEX // ID AB098248_1 STANDARD; PRT; 178 AA. AC AB098248; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhA gene for NADH dehydrogenase ND 1 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT GENE : ndhA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77588.1 FT PROTEIN_NAME : NADH dehydrogenase ND 1 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 534 FT DIRECTIONS : positive FT EDITING : 3 S(tCa) -> L(tTa) FT EDITING : 172 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 534 NT; CD 1 aacagttCaa gtacagttga tatagtggaa gcgcagtcaa aatatggttt CD 51 ttgggggtgg aatttgtggc gtcaacccat cgggtttatc gtttttctaa CD 101 tttcttctct agccgagtgt gaaagattac cttttgattt accagaagca CD 151 gaagaagaat tagtagcagg gtatcaaacc gaatattcag gtatcaaatt CD 201 tggtttattt tacattgctt catatctgaa tctactagtt tcttcattat CD 251 ttgtaacagt tctttacttg ggaggttgga atctttctat tccgtacata CD 301 tttgttcctg agctatttgg cataaataaa aagggtaaag tctttggcac CD 351 actaattggt atctttatca cattagccaa aacttatttg tttttgttca CD 401 ttcctattgc aacaagatgg actttaccga ggctgagaat ggaccaacta CD 451 ttaaatcttg ggtggaaatt tcttttacct atttctctag gtaatctatt CD 501 attgacaact tcgtCccaac ttctttcact gtaa FT EDITED CDNA CD 1 aacagttTaa gtacagttga tatagtggaa gcgcagtcaa aatatggttt CD 51 ttgggggtgg aatttgtggc gtcaacccat cgggtttatc gtttttctaa CD 101 tttcttctct agccgagtgt gaaagattac cttttgattt accagaagca CD 151 gaagaagaat tagtagcagg gtatcaaacc gaatattcag gtatcaaatt CD 201 tggtttattt tacattgctt catatctgaa tctactagtt tcttcattat CD 251 ttgtaacagt tctttacttg ggaggttgga atctttctat tccgtacata CD 301 tttgttcctg agctatttgg cataaataaa aagggtaaag tctttggcac CD 351 actaattggt atctttatca cattagccaa aacttatttg tttttgttca CD 401 ttcctattgc aacaagatgg actttaccga ggctgagaat ggaccaacta CD 451 ttaaatcttg ggtggaaatt tcttttacct atttctctag gtaatctatt CD 501 attgacaact tcgtTccaac ttctttcact gtaa SQ SEQUENCE 178 AA; NSLSTVDIVE AQSKYGFWGW NLWRQPIGFI VFLISSLAEC ERLPFDLPEA EEELVAGYQT EYSGIKFGLF YIASYLNLLV SSLFVTVLYL GGWNLSIPYI FVPELFGINK KGKVFGTLIG IFITLAKTYL FLFIPIATRW TLPRLRMDQL LNLGWKFLLP ISLGNLLLTT SFQLLSL* // ID AB098249_1 STANDARD; PRT; 174 AA. AC AB098249; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis ndhA gene for NADH dehydrogenese ND 1 OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77589.1 FT PROTEIN_NAME : NADH dehydrogenese ND 1 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 521 FT DIRECTIONS : positive FT EDITING : 108 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 521 NT; CD 1 gaaatagaaa ctatcaattc tttttccaaa ttggaatcct taaaagaagt CD 51 ctatgggatc atatggatgc ttttccctat ttttactctt gtattaggaa CD 101 tcacaatagg tgtactagta attgtttggt tagaaagaga aatatctgca CD 151 ggaatacaac aacgtatcgg acctgaatat gctggccctt taggaattct CD 201 tcaagctcta gcagatggga caaaactact tttgaaagag aaccttattc CD 251 catctacagg agatactcgt ttattcagta tcggaccatc catagcagta CD 301 atatccatct ttctaagtta ttCagtaatt ccttttggtg atcaccttgt CD 351 tctagccgat cttagtattg gtgttttttt ctggattgcc atttcaagta CD 401 ttgctcccgt tggacttctt atgtcgggat atggatcaaa taataaatat CD 451 tcctttttag gtggtctacg agcagctgct caatcaatta gttatgaaat CD 501 accattagct ctatgtgtgt t FT EDITED CDNA CD 1 gaaatagaaa ctatcaattc tttttccaaa ttggaatcct taaaagaagt CD 51 ctatgggatc atatggatgc ttttccctat ttttactctt gtattaggaa CD 101 tcacaatagg tgtactagta attgtttggt tagaaagaga aatatctgca CD 151 ggaatacaac aacgtatcgg acctgaatat gctggccctt taggaattct CD 201 tcaagctcta gcagatggga caaaactact tttgaaagag aaccttattc CD 251 catctacagg agatactcgt ttattcagta tcggaccatc catagcagta CD 301 atatccatct ttctaagtta ttTagtaatt ccttttggtg atcaccttgt CD 351 tctagccgat cttagtattg gtgttttttt ctggattgcc atttcaagta CD 401 ttgctcccgt tggacttctt atgtcgggat atggatcaaa taataaatat CD 451 tcctttttag gtggtctacg agcagctgct caatcaatta gttatgaaat CD 501 accattagct ctatgtgtgt t SQ SEQUENCE 174 AA; EIETINSFSK LESLKEVYGI IWMLFPIFTL VLGITIGVLV IVWLEREISA GIQQRIGPEY AGPLGILQAL ADGTKLLLKE NLIPSTGDTR LFSIGPSIAV ISIFLSYLVI PFGDHLVLAD LSIGVFFWIA ISSIAPVGLL MSGYGSNNKY SFLGGLRAAA QSISYEIPLA LCVX // ID AB098250_1 STANDARD; PRT; 49 AA. AC AB098250; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis atpF gene for ATP synthase I subunit, OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT C-terminal not determined FT GENE : atpF FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77590.1 FT PROTEIN_NAME : ATP synthase I subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 145 FT DIRECTIONS : positive FT EDITING : 31 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 145 NT; CD 1 atgaaaaacg taaccgattc tttcgtttct ttgggccact ggccatctgc CD 51 cgggagtttc gggtttaata ccgatatttt agcaacaaat cCaataaatc CD 101 taagtgtagt gcttggtgta ttgatttttt ttggaaaggg agtgt FT EDITED CDNA CD 1 atgaaaaacg taaccgattc tttcgtttct ttgggccact ggccatctgc CD 51 cgggagtttc gggtttaata ccgatatttt agcaacaaat cTaataaatc CD 101 taagtgtagt gcttggtgta ttgatttttt ttggaaaggg agtgt SQ SEQUENCE 49 AA; MKNVTDSFVS LGHWPSAGSF GFNTDILATN LINLSVVLGV LIFFGKGVX // ID AB098251_1 STANDARD; PRT; 123 AA. AC AB098251; DT Tue Jul 21 07:00:07 2009 DE Nicotiana tomentosiformis atpA gene for ATP synthase alpha subunit, OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Biol. Evol. 20 (7), 1028-1035 (2003) RL PUBMED 12716996 FT N-terminal not determined FT C-terminal not determined FT GENE : atpA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC77591.1 FT PROTEIN_NAME : ATP synthase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 369 FT DIRECTIONS : positive FT EDITING : 73 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 369 NT; CD 1 gtaatatgtg tttatgtagc tattgggcaa aaagcatctt ctgtggccca CD 51 ggtcgtaact actttacagg aaaggggagc gatggaatac actattgtgg CD 101 tagccgaaac ggcagattcc cctgctacat tacaatacct tgctccttat CD 151 acaggagcag ctctggctga atattttatg tatcgtgaac gacacacttt CD 201 aatcatttat gatgatcCct ccaaacaagc gcaagcttat cgccaaatgt CD 251 ctcttctatt acgaagaccg cccggtcgtg aagcttatcc aggagatgtt CD 301 ttttatttgc attcacgcct tttggaaaga gccgctaaat taagttctag CD 351 tttaggtgaa ggaagtatg FT EDITED CDNA CD 1 gtaatatgtg tttatgtagc tattgggcaa aaagcatctt ctgtggccca CD 51 ggtcgtaact actttacagg aaaggggagc gatggaatac actattgtgg CD 101 tagccgaaac ggcagattcc cctgctacat tacaatacct tgctccttat CD 151 acaggagcag ctctggctga atattttatg tatcgtgaac gacacacttt CD 201 aatcatttat gatgatcTct ccaaacaagc gcaagcttat cgccaaatgt CD 251 ctcttctatt acgaagaccg cccggtcgtg aagcttatcc aggagatgtt CD 301 ttttatttgc attcacgcct tttggaaaga gccgctaaat taagttctag CD 351 tttaggtgaa ggaagtatg SQ SEQUENCE 123 AA; VICVYVAIGQ KASSVAQVVT TLQERGAMEY TIVVAETADS PATLQYLAPY TGAALAEYFM YRERHTLIIY DDLSKQAQAY RQMSLLLRRP PGREAYPGDV FYLHSRLLER AAKLSSSLGE GSM // ID AB158193_1 STANDARD; PRT; 563 AA. AC AB158193; DT Tue Jul 21 07:00:09 2009 DE Hordeum vulgare subsp. vulgare mitochondrial rps2 gene for OS mitochondrion Hordeum vulgare subsp. vulgare (domesticated barley) OC Hordeum vulgare subsp. vulgare RN [1] RL Theor. Appl. Genet. 110 (6), 995-1002 (2005) RL PUBMED 15754209 FT Full length CDS FT GENE : rps2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAD61010.1 FT PROTEIN_NAME : ribosomal protein S2 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1263 - 2951 FT DIRECTIONS : positive FT EDITING : 60 P(cCc) -> L(cTc) FT EDITING : 67 S(tCc) -> F(tTc) FT EDITING : 85 A(gCg) -> V(gTg) FT EDITING : 162 P(cCa) -> L(cTa) FT EDITING : 186 P(Cct) -> S(Tct) FT EDITING : 194 R(Cgt) -> C(Tgt) FT EDITING : 196 S(tCg) -> L(tTg) FT EDITING : 537 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 1689 NT; CD 1 atgacaatgc tttcgatagt ctgtactaaa ttactttgta cgaatgcaca CD 51 tctcggccgt cgggtagctg atcaccattt caaagtctat atccgtggtt CD 101 caagaaatgg aattgctatt ctcgattcag acaagacact gatttgttta CD 151 cgaaacgctc ttcattttat aggatctcCc attcgtcaaa aaggccgttC CD 201 cttcttttta aagaccaatc atttatttat ttatgagata acggaagaaa CD 251 tggCgagcta tttaagaagc tatttaagaa atgtgaattc tcattgtttc CD 301 gatgattctc aatggaagat cggggcgttt ttgaccaatt cttttgcaaa CD 351 taaaaaaaaa ttccgttcaa gaaagaagaa gatcaatttt gggttgaacc CD 401 aacaacctga ttgtgtggtt attctgaatg cagatagaaa gtcttcggtc CD 451 atactggaag ctgatcgatc acaaatacct attcCatcct tagttgattc CD 501 tacgatccca tgggaatcct ataaaagaat cacttatccc atcccagcga CD 551 atgatCctat acagttcgta tatctatttC gtcattCgat catgaaaaca CD 601 gtgattctta aacagaatgc gattagtaga gagacaccac catctcttag CD 651 cagagtcact tttaagacgg tgtccactgg catgcactcc acctcttcac CD 701 cccgaggaag aaaagtgtct cttgtgagac tgaaccccat gagaaccgtt CD 751 tcttcggctg tctttgaatt attagcggca gcccagccct tctttaccaa CD 801 tactactgag agtctacccc agccacaagg gggggctgct caaatagttc CD 851 aggagacgcc agccccacaa gggttcacgg agctccaacc tatacaaggg CD 901 ccagctatac ctttaagttt gcaactcgat tttcaatccc aagctcattt CD 951 tcttgactgt atgacaagac atgcaattgg ggagaataat atgttttata CD 1001 aaattcctgg tcgtctgcat aacccaatat tagaaaatta tggaggtgca CD 1051 ggtccaagta cttcgactcc accgatatta gaaaattatg gaggtgcagg CD 1101 cccaagtact tcgaatccac caatggattt atctccaacc atggatatgg CD 1151 atgtatctcc taccattcat gtacctctta gcaaagagca aatctatttc CD 1201 aatttggtgc atcttgatgc cactaggaaa acctcgggat tatcccaaga CD 1251 gaagcttatg acactagtag agataattta tattaagaaa tcgtcaatac CD 1301 tagcggagct aatggataaa tctggccctc aaaattgcca catcctttgg CD 1351 aatacggatg gtgctggcaa tgccatccga aaaggaaacg gagaagaata CD 1401 tgatgtaaaa accttaaggg agatccttaa aagtttgcga agtaatgagg CD 1451 aattacgtaa aagtcattat ttggggggaa tttggaaaag aaggatttca CD 1501 gacctcccta aagccaaatt aaaactttta agagtggaag atatacccgg CD 1551 gggggatata cgagattctt tgacccagag aatcgggcct gactgggata CD 1601 aattagattC gatgaaccag aaaaacctct ggactgagtg gaaagacttt CD 1651 gagaacccga ccaacctccg gaatcccgag gactggtaa FT EDITED CDNA CD 1 atgacaatgc tttcgatagt ctgtactaaa ttactttgta cgaatgcaca CD 51 tctcggccgt cgggtagctg atcaccattt caaagtctat atccgtggtt CD 101 caagaaatgg aattgctatt ctcgattcag acaagacact gatttgttta CD 151 cgaaacgctc ttcattttat aggatctcTc attcgtcaaa aaggccgttT CD 201 cttcttttta aagaccaatc atttatttat ttatgagata acggaagaaa CD 251 tggTgagcta tttaagaagc tatttaagaa atgtgaattc tcattgtttc CD 301 gatgattctc aatggaagat cggggcgttt ttgaccaatt cttttgcaaa CD 351 taaaaaaaaa ttccgttcaa gaaagaagaa gatcaatttt gggttgaacc CD 401 aacaacctga ttgtgtggtt attctgaatg cagatagaaa gtcttcggtc CD 451 atactggaag ctgatcgatc acaaatacct attcTatcct tagttgattc CD 501 tacgatccca tgggaatcct ataaaagaat cacttatccc atcccagcga CD 551 atgatTctat acagttcgta tatctatttT gtcattTgat catgaaaaca CD 601 gtgattctta aacagaatgc gattagtaga gagacaccac catctcttag CD 651 cagagtcact tttaagacgg tgtccactgg catgcactcc acctcttcac CD 701 cccgaggaag aaaagtgtct cttgtgagac tgaaccccat gagaaccgtt CD 751 tcttcggctg tctttgaatt attagcggca gcccagccct tctttaccaa CD 801 tactactgag agtctacccc agccacaagg gggggctgct caaatagttc CD 851 aggagacgcc agccccacaa gggttcacgg agctccaacc tatacaaggg CD 901 ccagctatac ctttaagttt gcaactcgat tttcaatccc aagctcattt CD 951 tcttgactgt atgacaagac atgcaattgg ggagaataat atgttttata CD 1001 aaattcctgg tcgtctgcat aacccaatat tagaaaatta tggaggtgca CD 1051 ggtccaagta cttcgactcc accgatatta gaaaattatg gaggtgcagg CD 1101 cccaagtact tcgaatccac caatggattt atctccaacc atggatatgg CD 1151 atgtatctcc taccattcat gtacctctta gcaaagagca aatctatttc CD 1201 aatttggtgc atcttgatgc cactaggaaa acctcgggat tatcccaaga CD 1251 gaagcttatg acactagtag agataattta tattaagaaa tcgtcaatac CD 1301 tagcggagct aatggataaa tctggccctc aaaattgcca catcctttgg CD 1351 aatacggatg gtgctggcaa tgccatccga aaaggaaacg gagaagaata CD 1401 tgatgtaaaa accttaaggg agatccttaa aagtttgcga agtaatgagg CD 1451 aattacgtaa aagtcattat ttggggggaa tttggaaaag aaggatttca CD 1501 gacctcccta aagccaaatt aaaactttta agagtggaag atatacccgg CD 1551 gggggatata cgagattctt tgacccagag aatcgggcct gactgggata CD 1601 aattagattT gatgaaccag aaaaacctct ggactgagtg gaaagacttt CD 1651 gagaacccga ccaacctccg gaatcccgag gactggtaa SQ SEQUENCE 563 AA; MTMLSIVCTK LLCTNAHLGR RVADHHFKVY IRGSRNGIAI LDSDKTLICL RNALHFIGSL IRQKGRFFFL KTNHLFIYEI TEEMVSYLRS YLRNVNSHCF DDSQWKIGAF LTNSFANKKK FRSRKKKINF GLNQQPDCVV ILNADRKSSV ILEADRSQIP ILSLVDSTIP WESYKRITYP IPANDSIQFV YLFCHLIMKT VILKQNAISR ETPPSLSRVT FKTVSTGMHS TSSPRGRKVS LVRLNPMRTV SSAVFELLAA AQPFFTNTTE SLPQPQGGAA QIVQETPAPQ GFTELQPIQG PAIPLSLQLD FQSQAHFLDC MTRHAIGENN MFYKIPGRLH NPILENYGGA GPSTSTPPIL ENYGGAGPST SNPPMDLSPT MDMDVSPTIH VPLSKEQIYF NLVHLDATRK TSGLSQEKLM TLVEIIYIKK SSILAELMDK SGPQNCHILW NTDGAGNAIR KGNGEEYDVK TLREILKSLR SNEELRKSHY LGGIWKRRIS DLPKAKLKLL RVEDIPGGDI RDSLTQRIGP DWDKLDLMNQ KNLWTEWKDF ENPTNLRNPE DW* // ID AB193121_2 STANDARD; PRT; 342 AA. AC AB193121; DT Tue Jul 21 07:00:09 2009 DE Takakia lepidozioides rps11, rpoA, petD genes for ribosomal protein OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : rpoA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAD60944.2 FT PROTEIN_NAME : DNA-dependent RNA polymerase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 73 - 1098 FT DIRECTIONS : positive FT EDITING : 35 P(Cct) -> S(Tct) FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 67 S(tCc) -> F(tTc) FT EDITING : 88 S(tCa) -> L(tTa) FT EDITING : 91 S(tCa) -> L(tTa) FT EDITING : 123 S(tCa) -> L(tTa) FT EDITING : 136 T(aCa) -> I(aTa) FT EDITING : 145 S(tCg) -> L(tTg) FT EDITING : 170 S(tCt) -> F(tTt) FT EDITING : 172 A(gCa) -> V(gTa) FT EDITING : 182 A(gCa) -> V(gTa) FT EDITING : 288 P(cCC) -> L(cTT) FT EDITING : 299 P(cCt) -> L(cTt) FT EDITING : 325 S(tCa) -> L(tTa) FT EDITING : 342 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1026 NT; CD 1 atgattcgag atgagatacc gatctccgct caggtactac agtggaggtg CD 51 cgtggaatct agagtagata gtgcgcgtct tcattatagt cgattcgcca CD 101 taCctccatt tagaagcggt caagccagta cagtcggaat tgctatgcgc CD 151 agagcctCac ttggagaggt ggaaggaacg tgtatcacat gtgcagaatC CD 201 caagagagtg acacatgaat attctacaat attaggcatt caagaatcgg CD 251 tacatgacgt ttCaattaac tCaggagaaa ttgtacttag aagcgattct CD 301 tatgaaacac aaaaagcgtt tatatctatt cttggaccta aaaaggtaac CD 351 tgctcaagac atcatatCac cgccttccgt caaaataatt gatactacac CD 401 aatataCagc caccgttact aaagcaattc attCggatat tgaattgaag CD 451 attgagaaag attttggata ccgtatagag gatccaataa aatccgcaga CD 501 tggaaattCt cctgCagatg ccgtgtttat gcctattcga aacgCaaatt CD 551 atagtgttca ttctttcgaa aacggaaacg agacacaaga aatacttttt CD 601 cttgaaatat ggactaatgg aagtgtgact cccaaagaag cactttatga CD 651 agcttctcga agtttaataa atttattcat tcctttttta catgcagaaa CD 701 agaaagaatt catttatgga ttgaaaaata catatgaatc taatatgtct CD 751 tacttctcct ctccctcctt atcagccgat atagacgaaa tgacaaaagg CD 801 agttactttt aaacatatat tcattgacca attggagtta cccgctagag CD 851 cttataactg tcCCaaaaga gttaatgcac atacaatatc agatcCttta CD 901 aattatagtc aagatgattt aatgaaaata aaaaactttg gaaagaaatc CD 951 cgtggaacag gtattggaag cttCacaaaa acgtttttcg ataaatctac CD 1001 caaaaaacaa gctccacttc catCaa FT EDITED CDNA CD 1 atgattcgag atgagatacc gatctccgct caggtactac agtggaggtg CD 51 cgtggaatct agagtagata gtgcgcgtct tcattatagt cgattcgcca CD 101 taTctccatt tagaagcggt caagccagta cagtcggaat tgctatgcgc CD 151 agagcctTac ttggagaggt ggaaggaacg tgtatcacat gtgcagaatT CD 201 caagagagtg acacatgaat attctacaat attaggcatt caagaatcgg CD 251 tacatgacgt ttTaattaac tTaggagaaa ttgtacttag aagcgattct CD 301 tatgaaacac aaaaagcgtt tatatctatt cttggaccta aaaaggtaac CD 351 tgctcaagac atcatatTac cgccttccgt caaaataatt gatactacac CD 401 aatataTagc caccgttact aaagcaattc attTggatat tgaattgaag CD 451 attgagaaag attttggata ccgtatagag gatccaataa aatccgcaga CD 501 tggaaattTt cctgTagatg ccgtgtttat gcctattcga aacgTaaatt CD 551 atagtgttca ttctttcgaa aacggaaacg agacacaaga aatacttttt CD 601 cttgaaatat ggactaatgg aagtgtgact cccaaagaag cactttatga CD 651 agcttctcga agtttaataa atttattcat tcctttttta catgcagaaa CD 701 agaaagaatt catttatgga ttgaaaaata catatgaatc taatatgtct CD 751 tacttctcct ctccctcctt atcagccgat atagacgaaa tgacaaaagg CD 801 agttactttt aaacatatat tcattgacca attggagtta cccgctagag CD 851 cttataactg tcTTaaaaga gttaatgcac atacaatatc agatcTttta CD 901 aattatagtc aagatgattt aatgaaaata aaaaactttg gaaagaaatc CD 951 cgtggaacag gtattggaag cttTacaaaa acgtttttcg ataaatctac CD 1001 caaaaaacaa gctccacttc catTaa SQ SEQUENCE 342 AA; MIRDEIPISA QVLQWRCVES RVDSARLHYS RFAISPFRSG QASTVGIAMR RALLGEVEGT CITCAEFKRV THEYSTILGI QESVHDVLIN LGEIVLRSDS YETQKAFISI LGPKKVTAQD IILPPSVKII DTTQYIATVT KAIHLDIELK IEKDFGYRIE DPIKSADGNF PVDAVFMPIR NVNYSVHSFE NGNETQEILF LEIWTNGSVT PKEALYEASR SLINLFIPFL HAEKKEFIYG LKNTYESNMS YFSSPSLSAD IDEMTKGVTF KHIFIDQLEL PARAYNCLKR VNAHTISDLL NYSQDDLMKI KNFGKKSVEQ VLEALQKRFS INLPKNKLHF H* // ID AB237912_44 STANDARD; PRT; 39 AA. AC AB237912; DT Tue Jul 21 07:00:11 2009 DE Nicotiana sylvestris chloroplast DNA, complete sequence. OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Genet. Genomics 275 (4), 367-373 (2006) RL PUBMED 16435119 FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE46668.1 FT PROTEIN_NAME : PSII L-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 66613 - 66729 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AB237912_90 STANDARD; PRT; 501 AA. AC AB237912; DT Tue Jul 21 07:00:11 2009 DE Nicotiana sylvestris chloroplast DNA, complete sequence. OS chloroplast Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Mol. Genet. Genomics 275 (4), 367-373 (2006) RL PUBMED 16435119 FT Full length CDS FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE46714.1 FT PROTEIN_NAME : NADH dehydrogenase ND4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 117523 - 119025 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 aCgaattatt ttccttggtt aacaataatt gtagtttttc caatatttgc CD 51 gggttcctta attttctttc ttccccataa aggaaatagg gtaattaggt CD 101 ggtatacgat atgtatatgt attttagaac tccttctaac gacttatgca CD 151 ttttgttatc atttccaatc ggatgatcca ttaatccaac tagtggagga CD 201 ttataaatgg atcaattttt ttgatttcca ttggagatta ggaatagatg CD 251 gactttctat aggacccatt ttattaacag gatttatcac tactttagct CD 301 actttagcgg cttggccagt tactcgagat tctcgattat tccattttct CD 351 catgttagca atgtacagtg gtcaaattgg atcattttcg tctcgggacc CD 401 ttttactttt tttcatcatg tgggagttag aattaattcc tgtttatcta CD 451 cttctatgca tgtggggagg aaagaaacgt ctgtactcag ctacaaaatt CD 501 tattttgtac acggcggggg gttctgtttt tctcttaatg ggagttttgg CD 551 gtcttgcttt atatggttct aatgaaccaa cattaaattt tgaaacatca CD 601 gttaatcagt catatcctgt ggttttagaa ataatattct atattggatt CD 651 ttttattgct tttgctgtca aatcgcccat tatcccccta cacacatggt CD 701 taccagatac ccatggagaa gcacattaca gtacttgtat gcttctagcc CD 751 ggaattttat taaaaatggg agcgtatgga ttaattcgaa tcaatatgga CD 801 attattacct catgcccatt ctatattttc tccttggttg atgataatag CD 851 gtacaataca aataatctat gcagctttaa catctcttgg ccaacggaat CD 901 ttaaaaaaaa gaatagccta ttcctctgtc tctcatatgg gtttcataat CD 951 tataggaatt agttctctaa ccgacacggg acttaatgga gcccttttac CD 1001 aaataatatc tcatggattt attggtgctg cacttttttt cttggcggga CD 1051 acgacttatg atagaatccg ccttgtttat cttgacgaaa tgggcggaat CD 1101 agctattcca atgccaaaaa tgttcacgat gttcagtagc ttttcgatgg CD 1151 cttcccttgc attaccaggt atgagtggtt ttgttgccga attgatagta CD 1201 ttttttggaa taattaccgg ccaaaaatat cttttaattc caaaaatact CD 1251 aattactttt gtaatggcaa ttggaatgat attaactcct atttattcat CD 1301 tatctatgtc acgccagatg ttctatggat acaagctatt taatgccccg CD 1351 aaggattctt tttttgattc tggaccgcga gagttatttc tttcgatctc CD 1401 catcttttta cccgtaatag gtattggtat atacccggat ttcgttcttt CD 1451 cattagcagt tgacaaggtc gaagttattc tatctaattt tttttataga CD 1501 taa FT EDITED CDNA CD 1 aTgaattatt ttccttggtt aacaataatt gtagtttttc caatatttgc CD 51 gggttcctta attttctttc ttccccataa aggaaatagg gtaattaggt CD 101 ggtatacgat atgtatatgt attttagaac tccttctaac gacttatgca CD 151 ttttgttatc atttccaatc ggatgatcca ttaatccaac tagtggagga CD 201 ttataaatgg atcaattttt ttgatttcca ttggagatta ggaatagatg CD 251 gactttctat aggacccatt ttattaacag gatttatcac tactttagct CD 301 actttagcgg cttggccagt tactcgagat tctcgattat tccattttct CD 351 catgttagca atgtacagtg gtcaaattgg atcattttcg tctcgggacc CD 401 ttttactttt tttcatcatg tgggagttag aattaattcc tgtttatcta CD 451 cttctatgca tgtggggagg aaagaaacgt ctgtactcag ctacaaaatt CD 501 tattttgtac acggcggggg gttctgtttt tctcttaatg ggagttttgg CD 551 gtcttgcttt atatggttct aatgaaccaa cattaaattt tgaaacatca CD 601 gttaatcagt catatcctgt ggttttagaa ataatattct atattggatt CD 651 ttttattgct tttgctgtca aatcgcccat tatcccccta cacacatggt CD 701 taccagatac ccatggagaa gcacattaca gtacttgtat gcttctagcc CD 751 ggaattttat taaaaatggg agcgtatgga ttaattcgaa tcaatatgga CD 801 attattacct catgcccatt ctatattttc tccttggttg atgataatag CD 851 gtacaataca aataatctat gcagctttaa catctcttgg ccaacggaat CD 901 ttaaaaaaaa gaatagccta ttcctctgtc tctcatatgg gtttcataat CD 951 tataggaatt agttctctaa ccgacacggg acttaatgga gcccttttac CD 1001 aaataatatc tcatggattt attggtgctg cacttttttt cttggcggga CD 1051 acgacttatg atagaatccg ccttgtttat cttgacgaaa tgggcggaat CD 1101 agctattcca atgccaaaaa tgttcacgat gttcagtagc ttttcgatgg CD 1151 cttcccttgc attaccaggt atgagtggtt ttgttgccga attgatagta CD 1201 ttttttggaa taattaccgg ccaaaaatat cttttaattc caaaaatact CD 1251 aattactttt gtaatggcaa ttggaatgat attaactcct atttattcat CD 1301 tatctatgtc acgccagatg ttctatggat acaagctatt taatgccccg CD 1351 aaggattctt tttttgattc tggaccgcga gagttatttc tttcgatctc CD 1401 catcttttta cccgtaatag gtattggtat atacccggat ttcgttcttt CD 1451 cattagcagt tgacaaggtc gaagttattc tatctaattt tttttataga CD 1501 taa SQ SEQUENCE 501 AA; MNYFPWLTII VVFPIFAGSL IFFLPHKGNR VIRWYTICIC ILELLLTTYA FCYHFQSDDP LIQLVEDYKW INFFDFHWRL GIDGLSIGPI LLTGFITTLA TLAAWPVTRD SRLFHFLMLA MYSGQIGSFS SRDLLLFFIM WELELIPVYL LLCMWGGKKR LYSATKFILY TAGGSVFLLM GVLGLALYGS NEPTLNFETS VNQSYPVVLE IIFYIGFFIA FAVKSPIIPL HTWLPDTHGE AHYSTCMLLA GILLKMGAYG LIRINMELLP HAHSIFSPWL MIIGTIQIIY AALTSLGQRN LKKRIAYSSV SHMGFIIIGI SSLTDTGLNG ALLQIISHGF IGAALFFLAG TTYDRIRLVY LDEMGGIAIP MPKMFTMFSS FSMASLALPG MSGFVAELIV FFGIITGQKY LLIPKILITF VMAIGMILTP IYSLSMSRQM FYGYKLFNAP KDSFFDSGPR ELFLSISIFL PVIGIGIYPD FVLSLAVDKV EVILSNFFYR * // ID AB240139_44 STANDARD; PRT; 39 AA. AC AB240139; DT Tue Jul 21 07:00:11 2009 DE Nicotiana tomentosiformis chloroplast DNA, complete sequence. OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Genet. Genomics 275 (4), 367-373 (2006) RL PUBMED 16435119 FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE48018.1 FT PROTEIN_NAME : PSII L-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 66484 - 66600 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AB240139_89 STANDARD; PRT; 501 AA. AC AB240139; DT Tue Jul 21 07:00:11 2009 DE Nicotiana tomentosiformis chloroplast DNA, complete sequence. OS chloroplast Nicotiana tomentosiformis OC Nicotiana tomentosiformis RN [1] RL Mol. Genet. Genomics 275 (4), 367-373 (2006) RL PUBMED 16435119 FT Full length CDS FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE48063.1 FT PROTEIN_NAME : NADH dehydrogenase ND4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 117281 - 118783 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 aCgaattatt ttccttggtt aacaataatt gtagtttttc caatatttgc CD 51 gggttcctta attttctttc ttccccataa aggaaatagg gtaattaggt CD 101 ggtataccat atgtatatgt attttagaac tccttctaac aacttatgca CD 151 ttttgttatc atttccaatc ggatgatcca ttaatccaac tagtggagga CD 201 ttataaatgg atcaattttt ttgatttcca ttggagatta ggaatagatg CD 251 gactttctat aggacccatt ttattaacag gatttatcac tactttagct CD 301 actttagcgg cttggccaat tactcgagat tctcgattat tccattttct CD 351 catgttagca atgtacagtg gtcaaattgg atcattttcg tctcgggacc CD 401 ttttactttt tttcatcatg tgggagttag aattaattcc tgtttatcta CD 451 cttctatgca tgtggggagg aaagaaacgt ctgtactcag ctacaaaatt CD 501 tattttgtac acggcggggg gttctgtttt tctcttaatg ggagttttgg CD 551 gtgttgcttt atatggttct aatgaaccaa cattaaattt tgaaacatca CD 601 gttaatcagt catatcctgt ggttttagaa ataatattct atattggatt CD 651 ttttattgct tttgctgtca aatcgcccat tatcccccta cacacatggt CD 701 taccagatac ccatggagaa gcacattaca gtacttgtat gcttctagcc CD 751 ggaatcttat taaaaatggg agcgtatgga ttaattcgaa tcaatatgga CD 801 attattacct catgcccatt ctatattttc tccttggttg atgataatag CD 851 gtacaataca aataatctat gcagcttcaa catctcttgg ccaacggaat CD 901 ttaaaaaaaa gaatagccta ttcctctgtc tctcatatgg gtttcataat CD 951 tataggaatt agttctctaa ccgatacggg actaaatgga gcccttttac CD 1001 aaataatatc tcatggattt attggtgctg cacttttttt cttagcggga CD 1051 acgacttatg atagaatccg ccttgtttat cttgacgaaa tgggcggaat CD 1101 agctagtcca atgccaaaaa tgttcacgat gttcagtagc ttttcgatgg CD 1151 cttcccttgc attaccaggt atgagtggtt ttgttgccga attgatagta CD 1201 ttttttggaa taattaccgg ccaaaaatat cttttaattc caaaaatact CD 1251 aattactttt gtaatggcaa ttggaatgat attaactcct atttattcat CD 1301 tatctatgtc acgccagatg ttctatggat acaagctatt taatgccccg CD 1351 aaggattctt tttttgattc tggaccgcga gagttatttc tttcgatctc CD 1401 catcttttta cccgtaatag gtattggtat atacccagat ttcgttcttt CD 1451 cattagcagt tgacaaggtc gaagttattc tatctaattt tttttataga CD 1501 taa FT EDITED CDNA CD 1 aTgaattatt ttccttggtt aacaataatt gtagtttttc caatatttgc CD 51 gggttcctta attttctttc ttccccataa aggaaatagg gtaattaggt CD 101 ggtataccat atgtatatgt attttagaac tccttctaac aacttatgca CD 151 ttttgttatc atttccaatc ggatgatcca ttaatccaac tagtggagga CD 201 ttataaatgg atcaattttt ttgatttcca ttggagatta ggaatagatg CD 251 gactttctat aggacccatt ttattaacag gatttatcac tactttagct CD 301 actttagcgg cttggccaat tactcgagat tctcgattat tccattttct CD 351 catgttagca atgtacagtg gtcaaattgg atcattttcg tctcgggacc CD 401 ttttactttt tttcatcatg tgggagttag aattaattcc tgtttatcta CD 451 cttctatgca tgtggggagg aaagaaacgt ctgtactcag ctacaaaatt CD 501 tattttgtac acggcggggg gttctgtttt tctcttaatg ggagttttgg CD 551 gtgttgcttt atatggttct aatgaaccaa cattaaattt tgaaacatca CD 601 gttaatcagt catatcctgt ggttttagaa ataatattct atattggatt CD 651 ttttattgct tttgctgtca aatcgcccat tatcccccta cacacatggt CD 701 taccagatac ccatggagaa gcacattaca gtacttgtat gcttctagcc CD 751 ggaatcttat taaaaatggg agcgtatgga ttaattcgaa tcaatatgga CD 801 attattacct catgcccatt ctatattttc tccttggttg atgataatag CD 851 gtacaataca aataatctat gcagcttcaa catctcttgg ccaacggaat CD 901 ttaaaaaaaa gaatagccta ttcctctgtc tctcatatgg gtttcataat CD 951 tataggaatt agttctctaa ccgatacggg actaaatgga gcccttttac CD 1001 aaataatatc tcatggattt attggtgctg cacttttttt cttagcggga CD 1051 acgacttatg atagaatccg ccttgtttat cttgacgaaa tgggcggaat CD 1101 agctagtcca atgccaaaaa tgttcacgat gttcagtagc ttttcgatgg CD 1151 cttcccttgc attaccaggt atgagtggtt ttgttgccga attgatagta CD 1201 ttttttggaa taattaccgg ccaaaaatat cttttaattc caaaaatact CD 1251 aattactttt gtaatggcaa ttggaatgat attaactcct atttattcat CD 1301 tatctatgtc acgccagatg ttctatggat acaagctatt taatgccccg CD 1351 aaggattctt tttttgattc tggaccgcga gagttatttc tttcgatctc CD 1401 catcttttta cccgtaatag gtattggtat atacccagat ttcgttcttt CD 1451 cattagcagt tgacaaggtc gaagttattc tatctaattt tttttataga CD 1501 taa SQ SEQUENCE 501 AA; MNYFPWLTII VVFPIFAGSL IFFLPHKGNR VIRWYTICIC ILELLLTTYA FCYHFQSDDP LIQLVEDYKW INFFDFHWRL GIDGLSIGPI LLTGFITTLA TLAAWPITRD SRLFHFLMLA MYSGQIGSFS SRDLLLFFIM WELELIPVYL LLCMWGGKKR LYSATKFILY TAGGSVFLLM GVLGVALYGS NEPTLNFETS VNQSYPVVLE IIFYIGFFIA FAVKSPIIPL HTWLPDTHGE AHYSTCMLLA GILLKMGAYG LIRINMELLP HAHSIFSPWL MIIGTIQIIY AASTSLGQRN LKKRIAYSSV SHMGFIIIGI SSLTDTGLNG ALLQIISHGF IGAALFFLAG TTYDRIRLVY LDEMGGIASP MPKMFTMFSS FSMASLALPG MSGFVAELIV FFGIITGQKY LLIPKILITF VMAIGMILTP IYSLSMSRQM FYGYKLFNAP KDSFFDSGPR ELFLSISIFL PVIGIGIYPD FVLSLAVDKV EVILSNFFYR * // ID AB242560_5 STANDARD; PRT; 39 AA. AC AB242560; DT Tue Jul 21 07:00:11 2009 DE Beta vulgaris chloroplast trnP-CCA, trnW-UGG, petG, orf31, psbE, OS chloroplast Beta vulgaris OC Beta vulgaris RN [1] RL Published Only in Database (2005) FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE48707.1 FT PROTEIN_NAME : PSII L protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2744 - 2860 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctttattgg gggctattac tcatttttgt acttgctgtt ttattttcta CD 101 actatttttt caattaa FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctttattgg gggctattac tcatttttgt acttgctgtt ttattttcta CD 101 actatttttt caattaa SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AB254134_2 STANDARD; PRT; 509 AA. AC AB254134; DT Tue Jul 21 07:00:11 2009 DE Takakia lepidozioides chloroplast clpP, psbB, psbT, psbN, psbH, OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE94554.1 FT PROTEIN_NAME : photosystem II 47 kDa protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2215 - 3741 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 5 R(Cgg) -> W(Tgg) FT EDITING : 13 S(tCa) -> L(tTa) FT EDITING : 19 S(tCa) -> L(tTa) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 29 P(cCa) -> L(cTa) FT EDITING : 33 R(Cgg) -> W(Tgg) FT EDITING : 45 S(tCC) -> F(tTT) FT EDITING : 56 R(Cgg) -> W(Tgg) FT EDITING : 75 R(Cgg) -> W(Tgg) FT EDITING : 93 Y(taC) -> Y(taT) FT EDITING : 103 S(tCa) -> L(tTa) FT EDITING : 109 S(tCg) -> L(tTg) FT EDITING : 113 R(Cgg) -> W(Tgg) FT EDITING : 115 R(Cgg) -> W(Tgg) FT EDITING : 118 R(Cgg) -> W(Tgg) FT EDITING : 120 S(tCg) -> L(tTg) FT EDITING : 133 S(tCa) -> L(tTa) FT EDITING : 139 S(tCt) -> F(tTt) FT EDITING : 149 P(cCt) -> L(cTt) FT EDITING : 150 R(Cgt) -> C(Tgt) FT EDITING : 164 P(ccC) -> P(ccT) FT EDITING : 208 P(cCa) -> L(cTa) FT EDITING : 215 S(tCc) -> F(tTc) FT EDITING : 217 P(cCC) -> L(cTT) FT EDITING : 225 S(tCa) -> L(tTa) FT EDITING : 238 S(tCa) -> L(tTa) FT EDITING : 247 L(Ctc) -> F(Ttc) FT EDITING : 280 S(tCc) -> F(tTc) FT EDITING : 298 S(tCa) -> L(tTa) FT EDITING : 311 L(Ctt) -> F(Ttt) FT EDITING : 314 H(Cat) -> Y(Tat) FT EDITING : 330 T(aCg) -> M(aTg) FT EDITING : 340 R(Cgg) -> W(Tgg) FT EDITING : 346 F(ttC) -> F(ttT) FT EDITING : 362 P(CCt) -> F(TTt) FT EDITING : 363 S(tCt) -> F(tTt) FT EDITING : 366 L(Ctt) -> F(Ttt) FT EDITING : 370 S(tCg) -> L(tTg) FT EDITING : 383 S(tCc) -> F(tTc) FT EDITING : 406 P(cCg) -> L(cTg) FT EDITING : 430 S(tCt) -> F(tTt) FT EDITING : 432 S(tCC) -> F(tTT) FT EDITING : 443 S(tCt) -> F(tTt) FT EDITING : 453 S(tCt) -> F(tTt) FT EDITING : 461 P(cCc) -> L(cTc) FT EDITING : 463 S(tCt) -> F(tTt) FT EDITING : 468 R(Cgg) -> W(Tgg) FT EDITING : 474 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 1527 NT; CD 1 aCgggtttac ctCggtatcg cgtccatact gtcgtatCaa atgatcctgg CD 51 ccgttCaatt gccgtacatt Caatgcatac agctcCagtt tccggtCggg CD 101 ctggttctat ggctttatat gaattagctg tttCCgatcc atcggatccc CD 151 gttcttgatc caatgCggag acaaggtatg ttcgttatac ctttcatgac CD 201 tcgtttggga ataacaaagt ctCggggggg ctggagtatt actggagaaa CD 251 ctgtaactaa tgcgggtatt tggagttaCg aaggcgtggc tgcagtgcat CD 301 atcgtatCat ccggcttgtt attttCggcg gctatcCggc atCgggtcta CD 351 tCgggattCg gagttgttcc gtgatgaacg tacggggaaa ccttcttCag CD 401 atttgcctaa gatctCtgga attcatttat ttctctcagg agtccCtCgt CD 451 ttcggatttg gagcattcca tgtaacaggt ttattcggtc cCggaatatg CD 501 ggtatctgat ccttatggat tgactggaaa agtacaacct gtggctccag CD 551 cttggggagc tgagggtttc gatcctttcg ttccaggggg aatagcttct CD 601 caccatatcg cagcaggtat tcCaggtata ttagcaggtt tatCccaccC CD 651 Cagtgtccgt cccccccaac gatCatacaa gggattacgt atggggaatg CD 701 ttgaaactgt ttCatccagt agtattgctg ctgtatttCt cgccgctttc CD 751 gtcgttgccg gaactatgtg gtatggttcc gcagcaactc cagtagaatt CD 801 gtttggtcct actcgttatc aatgggatca aggattttCc caacaagaaa CD 851 tagatcgaag aattcgttcc agcgaagctg aaaaacttaa ttCatcagaa CD 901 gcttggtcca aaattcctga gaaattagct CtttatgatC atatcggtaa CD 951 taacccagct aaggggggat tatttagagc aggtgcgaCg gataatggag CD 1001 acggaatagc tgtcggtCgg ttaggtcatg ctgtcttCag agataaagag CD 1051 ggacatgagc tctttgtacg tcgtatgcct actCCttCtg aaactCttcc CD 1101 agtagtttCg gtagatgaag aaggaattgt tagagccgat gttccatCca CD 1151 gaagagcgga atcaaaatat agtgttgaac aagtaggtgt aactgttgaa CD 1201 ttttatggcg gtgaacCgga tggagtgagt tttagtgatc cagctacggt CD 1251 gaaaaagtat gccagacgtg ctcaattagg tgaaatttCt gaatCCgatc CD 1301 gcgctacttt aaaatcagat ggcgtttCtc gtagtagtcc gagaggttgg CD 1351 ttcacttCtg gtcatgccac atttgctctt cCcttctCtt ttggacatat CD 1401 tCggcatggt gctagaactt Cgtttagaga tgtatttgct ggtattgatc CD 1451 ctgatttaga tgctcaagtt gaattcgggg cattccaaaa actaggagat CD 1501 ccgactacta agagacaagt agtttaa FT EDITED CDNA CD 1 aTgggtttac ctTggtatcg cgtccatact gtcgtatTaa atgatcctgg CD 51 ccgttTaatt gccgtacatt Taatgcatac agctcTagtt tccggtTggg CD 101 ctggttctat ggctttatat gaattagctg tttTTgatcc atcggatccc CD 151 gttcttgatc caatgTggag acaaggtatg ttcgttatac ctttcatgac CD 201 tcgtttggga ataacaaagt ctTggggggg ctggagtatt actggagaaa CD 251 ctgtaactaa tgcgggtatt tggagttaTg aaggcgtggc tgcagtgcat CD 301 atcgtatTat ccggcttgtt attttTggcg gctatcTggc atTgggtcta CD 351 tTgggattTg gagttgttcc gtgatgaacg tacggggaaa ccttcttTag CD 401 atttgcctaa gatctTtgga attcatttat ttctctcagg agtccTtTgt CD 451 ttcggatttg gagcattcca tgtaacaggt ttattcggtc cTggaatatg CD 501 ggtatctgat ccttatggat tgactggaaa agtacaacct gtggctccag CD 551 cttggggagc tgagggtttc gatcctttcg ttccaggggg aatagcttct CD 601 caccatatcg cagcaggtat tcTaggtata ttagcaggtt tatTccaccT CD 651 Tagtgtccgt cccccccaac gatTatacaa gggattacgt atggggaatg CD 701 ttgaaactgt ttTatccagt agtattgctg ctgtatttTt cgccgctttc CD 751 gtcgttgccg gaactatgtg gtatggttcc gcagcaactc cagtagaatt CD 801 gtttggtcct actcgttatc aatgggatca aggattttTc caacaagaaa CD 851 tagatcgaag aattcgttcc agcgaagctg aaaaacttaa ttTatcagaa CD 901 gcttggtcca aaattcctga gaaattagct TtttatgatT atatcggtaa CD 951 taacccagct aaggggggat tatttagagc aggtgcgaTg gataatggag CD 1001 acggaatagc tgtcggtTgg ttaggtcatg ctgtcttTag agataaagag CD 1051 ggacatgagc tctttgtacg tcgtatgcct actTTttTtg aaactTttcc CD 1101 agtagtttTg gtagatgaag aaggaattgt tagagccgat gttccatTca CD 1151 gaagagcgga atcaaaatat agtgttgaac aagtaggtgt aactgttgaa CD 1201 ttttatggcg gtgaacTgga tggagtgagt tttagtgatc cagctacggt CD 1251 gaaaaagtat gccagacgtg ctcaattagg tgaaatttTt gaatTTgatc CD 1301 gcgctacttt aaaatcagat ggcgtttTtc gtagtagtcc gagaggttgg CD 1351 ttcacttTtg gtcatgccac atttgctctt cTcttctTtt ttggacatat CD 1401 tTggcatggt gctagaactt Tgtttagaga tgtatttgct ggtattgatc CD 1451 ctgatttaga tgctcaagtt gaattcgggg cattccaaaa actaggagat CD 1501 ccgactacta agagacaagt agtttaa SQ SEQUENCE 509 AA; MGLPWYRVHT VVLNDPGRLI AVHLMHTALV SGWAGSMALY ELAVFDPSDP VLDPMWRQGM FVIPFMTRLG ITKSWGGWSI TGETVTNAGI WSYEGVAAVH IVLSGLLFLA AIWHWVYWDL ELFRDERTGK PSLDLPKIFG IHLFLSGVLC FGFGAFHVTG LFGPGIWVSD PYGLTGKVQP VAPAWGAEGF DPFVPGGIAS HHIAAGILGI LAGLFHLSVR PPQRLYKGLR MGNVETVLSS SIAAVFFAAF VVAGTMWYGS AATPVELFGP TRYQWDQGFF QQEIDRRIRS SEAEKLNLSE AWSKIPEKLA FYDYIGNNPA KGGLFRAGAM DNGDGIAVGW LGHAVFRDKE GHELFVRRMP TFFETFPVVL VDEEGIVRAD VPFRRAESKY SVEQVGVTVE FYGGELDGVS FSDPATVKKY ARRAQLGEIF EFDRATLKSD GVFRSSPRGW FTFGHATFAL LFFFGHIWHG ARTLFRDVFA GIDPDLDAQV EFGAFQKLGD PTTKRQVV* // ID AB254134_3 STANDARD; PRT; 36 AA. AC AB254134; DT Tue Jul 21 07:00:11 2009 DE Takakia lepidozioides chloroplast clpP, psbB, psbT, psbN, psbH, OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbT FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE94555.1 FT PROTEIN_NAME : photosystem II T-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3874 - 3981 FT DIRECTIONS : positive FT EDITING : 6 H(Cat) -> Y(Tat) FT EDITING : 9 S(tCg) -> L(tTg) FT EDITING : 22 S(tCt) -> F(tTt) FT EDITING : 23 L(Ctc) -> F(Ttc) FT CODON_START : 1 CL CDNALEN 108 NT; CD 1 atggaagcat tggttCatac attttCgttg gtaggtactt taggaataat CD 51 tttttttgct atttCtCtcc gagaaccacc taaagttccg agcaaaggaa CD 101 aaaaataa FT EDITED CDNA CD 1 atggaagcat tggttTatac attttTgttg gtaggtactt taggaataat CD 51 tttttttgct atttTtTtcc gagaaccacc taaagttccg agcaaaggaa CD 101 aaaaataa SQ SEQUENCE 36 AA; MEALVYTFLL VGTLGIIFFA IFFREPPKVP SKGKK* // ID AB254134_5 STANDARD; PRT; 75 AA. AC AB254134; DT Tue Jul 21 07:00:11 2009 DE Takakia lepidozioides chloroplast clpP, psbB, psbT, psbN, psbH, OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbH FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE94557.1 FT PROTEIN_NAME : photosystem II 10 kDa phosphoprotein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 4311 - 4535 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 50 S(tCt) -> F(tTt) FT EDITING : 58 P(cCg) -> L(cTg) FT EDITING : 60 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 aCggctacac agattattga tgatgctcct aaaaccaggg gaaaacgaag CD 51 tggtatagga gatattttga aaccacttaa ttcggaatat ggtaaagtgg CD 101 cccctggatg gggaacaact cctctgatgg gtattgtagt agcactatCt CD 151 gcagtttttc tagttattat tcCggaacCt tataattctt ctgttttact CD 201 agacggagtt cctgtaagtt ggtaa FT EDITED CDNA CD 1 aTggctacac agattattga tgatgctcct aaaaccaggg gaaaacgaag CD 51 tggtatagga gatattttga aaccacttaa ttcggaatat ggtaaagtgg CD 101 cccctggatg gggaacaact cctctgatgg gtattgtagt agcactatTt CD 151 gcagtttttc tagttattat tcTggaacTt tataattctt ctgttttact CD 201 agacggagtt cctgtaagtt ggtaa SQ SEQUENCE 75 AA; MATQIIDDAP KTRGKRSGIG DILKPLNSEY GKVAPGWGTT PLMGIVVALF AVFLVIILEL YNSSVLLDGV PVSW* // ID AB254134_6 STANDARD; PRT; 216 AA. AC AB254134; DT Tue Jul 21 07:00:11 2009 DE Takakia lepidozioides chloroplast clpP, psbB, psbT, psbN, psbH, OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : petB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE94558.1 FT PROTEIN_NAME : cytochrome b6 complex subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 3/0 FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 8 S(tCC) -> F(tTT) FT EDITING : 33 S(tCt) -> F(tTt) FT EDITING : 34 H(Cat) -> Y(Tat) FT EDITING : 36 S(tCg) -> L(tTg) FT EDITING : 41 S(tCg) -> L(tTg) FT EDITING : 45 S(tCg) -> L(tTg) FT EDITING : 52 S(tCt) -> F(tTt) FT EDITING : 54 T(aCg) -> M(aTg) FT EDITING : 56 L(Ctc) -> F(Ttc) FT EDITING : 58 H(Cat) -> Y(Tat) FT EDITING : 68 P(Cct) -> S(Tct) FT EDITING : 95 S(tCa) -> L(tTa) FT EDITING : 97 T(aCg) -> M(aTg) FT EDITING : 99 P(cCg) -> L(cTg) FT EDITING : 102 S(tCt) -> F(tTt) FT EDITING : 106 P(cCt) -> L(cTt) FT EDITING : 122 A(gCa) -> V(gTa) FT EDITING : 124 P(cCa) -> L(cTa) FT EDITING : 131 P(CCt) -> F(TTt) FT EDITING : 140 R(Cgg) -> W(Tgg) FT EDITING : 145 H(Cac) -> Y(Tac) FT EDITING : 161 T(aCa) -> I(aTa) FT EDITING : 165 S(tCg) -> L(tTg) FT EDITING : 180 S(tCg) -> L(tTg) FT EDITING : 191 S(tCa) -> L(tTa) FT EDITING : 193 P(cCt) -> L(cTt) FT EDITING : 194 P(cCt) -> L(cTt) FT EDITING : 198 S(tCt) -> F(tTt) FT EDITING : 199 T(aCg) -> M(aTg) FT EDITING : 200 S(tCa) -> L(tTa) FT EDITING : 204 P(cCa) -> L(cTa) FT EDITING : 215 S(tCa) -> L(tTa) FT EDITING : 216 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 648 NT; CD 1 aCgggtaaag tatacgattg gtCCgaggag cgtctcgaaa tccaggcgat CD 51 tgcagatgat attactagta aatatgtccc gcctcatgtc aatatatCtC CD 101 attgttCggg gggaattact tCgacttgtt tctCggtaca ggtagccacc CD 151 ggttCtgcta CgactCtcta cCatcgtccg accgtaacag aagcttttgc CD 201 cCctgtccaa tatataatga ctgaagtcaa ttttggttgg ctaattcgat CD 251 cagttcatcg atggtcggcg agtatgatgg tttCaatgaC gattcCgcac CD 301 gtatCtcgcg tttatcCtac aggaggtttt aagaaacctc gtgaattaac CD 351 ttgggttact ggtgCaattc Cagctgtatt aacagtttct CCtggtgtaa CD 401 ctggttattc tttgcctCgg gatcaaattg gtCactgggc tgtcaagatc CD 451 gtaactggtg tacccgaagc tattcccgtt aCaggatctc cctCggtaga CD 501 gttattacgc ggaagtgtta gtgtaggtca atctacatCg actcgttttt CD 551 acagtttaca cacttttgta tCacctcCtc Ctactgctgt ttCtaCgtCa CD 601 atgcattttc Caatgattcg taaacaaggt atctcaggtc cttCaCaa FT EDITED CDNA CD 1 aTgggtaaag tatacgattg gtTTgaggag cgtctcgaaa tccaggcgat CD 51 tgcagatgat attactagta aatatgtccc gcctcatgtc aatatatTtT CD 101 attgttTggg gggaattact tTgacttgtt tctTggtaca ggtagccacc CD 151 ggttTtgcta TgactTtcta cTatcgtccg accgtaacag aagcttttgc CD 201 cTctgtccaa tatataatga ctgaagtcaa ttttggttgg ctaattcgat CD 251 cagttcatcg atggtcggcg agtatgatgg tttTaatgaT gattcTgcac CD 301 gtatTtcgcg tttatcTtac aggaggtttt aagaaacctc gtgaattaac CD 351 ttgggttact ggtgTaattc Tagctgtatt aacagtttct TTtggtgtaa CD 401 ctggttattc tttgcctTgg gatcaaattg gtTactgggc tgtcaagatc CD 451 gtaactggtg tacccgaagc tattcccgtt aTaggatctc cctTggtaga CD 501 gttattacgc ggaagtgtta gtgtaggtca atctacatTg actcgttttt CD 551 acagtttaca cacttttgta tTacctcTtc Ttactgctgt ttTtaTgtTa CD 601 atgcattttc Taatgattcg taaacaaggt atctcaggtc cttTaTaa SQ SEQUENCE 216 AA; MGKVYDWFEE RLEIQAIADD ITSKYVPPHV NIFYCLGGIT LTCFLVQVAT GFAMTFYYRP TVTEAFASVQ YIMTEVNFGW LIRSVHRWSA SMMVLMMILH VFRVYLTGGF KKPRELTWVT GVILAVLTVS FGVTGYSLPW DQIGYWAVKI VTGVPEAIPV IGSPLVELLR GSVSVGQSTL TRFYSLHTFV LPLLTAVFML MHFLMIRKQG ISGPL* // ID AB254134_7 STANDARD; PRT; 161 AA. AC AB254134; DT Tue Jul 21 07:00:11 2009 DE Takakia lepidozioides chloroplast clpP, psbB, psbT, psbN, psbH, OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : petD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAE94559.1 FT PROTEIN_NAME : cytochrome b/f complex subunit IV FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 3/2 FT EDITING : 9 S(tCa) -> L(tTa) FT EDITING : 14 S(tCg) -> L(tTg) FT EDITING : 37 S(tCg) -> L(tTg) FT EDITING : 40 S(tCt) -> F(tTt) FT EDITING : 45 P(cCa) -> L(cTa) FT EDITING : 73 P(cCg) -> L(cTg) FT EDITING : 82 S(tCt) -> F(tTt) FT EDITING : 85 S(tCt) -> F(tTt) FT EDITING : 99 P(cCt) -> L(cTt) FT EDITING : 114 P(cCg) -> L(cTg) FT EDITING : 134 P(cCa) -> L(cTa) FT EDITING : 141 P(cCt) -> L(cTt) FT EDITING : 142 R(Cgg) -> W(Tgg) FT EDITING : 157 L(Cta) -> L(Tta) FT EDITING : 161 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 483 NT; CD 1 atgggagtaa caaaaaaacc tgattCaagt gatcctgtat Cgagggctaa CD 51 attagctaaa ggtatgggac ataattatta tggggaaccc gcttggccta CD 101 acgatctttC gtatatttCt ccagtagtga ttcCaggtac tattgcatgt CD 151 actgtaggtc tagcagttct agaaccgtcc atgattggtg aaccggcaaa CD 201 tccatttgca actcctcCgg aaatattacc cgaatggtat ttctCtcctg CD 251 tgtCtcaaat acttcgtaca gtccctaata aattactagg tgttcCttta CD 301 atggctgcag tacctgcggg attattgaca ataccttttc Cggaaaatgt CD 351 gaataaattt cagaatcctt ttcgtcgtcc agtagctaca acagtttttc CD 401 Caatcggtac cgcagtagct cCtCggttgg gtattggggc tgctttacct CD 451 atcgataaat ctttaactCt agggcttttt Cga FT EDITED CDNA CD 1 atgggagtaa caaaaaaacc tgattTaagt gatcctgtat Tgagggctaa CD 51 attagctaaa ggtatgggac ataattatta tggggaaccc gcttggccta CD 101 acgatctttT gtatatttTt ccagtagtga ttcTaggtac tattgcatgt CD 151 actgtaggtc tagcagttct agaaccgtcc atgattggtg aaccggcaaa CD 201 tccatttgca actcctcTgg aaatattacc cgaatggtat ttctTtcctg CD 251 tgtTtcaaat acttcgtaca gtccctaata aattactagg tgttcTttta CD 301 atggctgcag tacctgcggg attattgaca ataccttttc Tggaaaatgt CD 351 gaataaattt cagaatcctt ttcgtcgtcc agtagctaca acagtttttc CD 401 Taatcggtac cgcagtagct cTtTggttgg gtattggggc tgctttacct CD 451 atcgataaat ctttaactTt agggcttttt Tga SQ SEQUENCE 161 AA; MGVTKKPDLS DPVLRAKLAK GMGHNYYGEP AWPNDLLYIF PVVILGTIAC TVGLAVLEPS MIGEPANPFA TPLEILPEWY FFPVFQILRT VPNKLLGVLL MAAVPAGLLT IPFLENVNKF QNPFRRPVAT TVFLIGTAVA LWLGIGAALP IDKSLTLGLF * // ID AB299142_1 STANDARD; PRT; 203 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : rps4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50112.1 FT PROTEIN_NAME : ribosomal protein S4 protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 64 - 672 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 18 S(tCa) -> L(tTa) FT EDITING : 59 H(Cat) -> Y(Tat) FT EDITING : 84 S(tCg) -> L(tTg) FT EDITING : 133 P(ccC) -> P(ccT) FT CODON_START : 1 CL CDNALEN 609 NT; CD 1 aCgtcccgtt accgaggacc tcgtgtgagg gtaatacgtc gtctgggggc CD 51 ttCaccagga ctaactaata aaacacccca gtcaaaatct ggttatatca CD 101 accaatctac atctaataaa aaaatttctc agtatcgtat tcgtttggag CD 151 gaaaaacaaa aattgcgttt tcatCatgga gtaacagagc gacaattact CD 201 caaatatgtt cgtattgcta gaagagctaa aggatcaacg ggtcaagttt CD 251 Cgttacaatt gctggaaatg cgtttagata atgtcatttt tcgattgggt CD 301 atggctccta ctattcctgg agcaagacaa ttggtgaatc atcgacacat CD 351 attggtaaat gatcgtacag taaacatacc aagttttcgt tgtaaaccCc CD 401 aagattttat tactacgaag gatcgacaaa aatctcaagc tgtaataaca CD 451 aaaaatatgg attgctctca gaaatcagaa atgccgaacc atttaactct CD 501 taattcttca caaaaaaggg gattggttaa tcaaataata gatcgtgaat CD 551 caattggttt aaaaataaat gaattgttag ttgtggaata ctattctcgt CD 601 caagcttga FT EDITED CDNA CD 1 aTgtcccgtt accgaggacc tcgtgtgagg gtaatacgtc gtctgggggc CD 51 ttTaccagga ctaactaata aaacacccca gtcaaaatct ggttatatca CD 101 accaatctac atctaataaa aaaatttctc agtatcgtat tcgtttggag CD 151 gaaaaacaaa aattgcgttt tcatTatgga gtaacagagc gacaattact CD 201 caaatatgtt cgtattgcta gaagagctaa aggatcaacg ggtcaagttt CD 251 Tgttacaatt gctggaaatg cgtttagata atgtcatttt tcgattgggt CD 301 atggctccta ctattcctgg agcaagacaa ttggtgaatc atcgacacat CD 351 attggtaaat gatcgtacag taaacatacc aagttttcgt tgtaaaccTc CD 401 aagattttat tactacgaag gatcgacaaa aatctcaagc tgtaataaca CD 451 aaaaatatgg attgctctca gaaatcagaa atgccgaacc atttaactct CD 501 taattcttca caaaaaaggg gattggttaa tcaaataata gatcgtgaat CD 551 caattggttt aaaaataaat gaattgttag ttgtggaata ctattctcgt CD 601 caagcttga SQ SEQUENCE 203 AA; MSRYRGPRVR VIRRLGALPG LTNKTPQSKS GYINQSTSNK KISQYRIRLE EKQKLRFHYG VTERQLLKYV RIARRAKGST GQVLLQLLEM RLDNVIFRLG MAPTIPGARQ LVNHRHILVN DRTVNIPSFR CKPQDFITTK DRQKSQAVIT KNMDCSQKSE MPNHLTLNSS QKRGLVNQII DRESIGLKIN ELLVVEYYSR QA* // ID AB299142_2 STANDARD; PRT; 170 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : ndhJ FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50113.1 FT PROTEIN_NAME : NADH dehydrogenase 30 kD subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2787 - 3296 FT DIRECTIONS : negative FT EDITING : 49 S(tcC) -> S(tcT) FT EDITING : 58 G(ggC) -> G(ggT) FT EDITING : 59 S(tCt) -> F(tTt) FT EDITING : 62 L(ctC) -> L(ctT) FT EDITING : 64 S(tcC) -> S(tcT) FT CODON_START : 1 CL CDNALEN 510 NT; CD 1 atgttagata cttctacgaa taatactact gaaatgcagg gtcgattatc CD 51 tgcttggcta gcgaaacata gattagctca tagacctttg ggtttcgatt CD 101 accaaggtgt agaaacttta caaattagat ctgaggattg gctttcCgta CD 151 gcggtagctt tatatgttta tggCtCtaac tatctCcgtt cCcaatgtgc CD 201 ttatgacgta gcgccagggg gactactagc tagtgtatat cactttacga CD 251 aagtacaaga caatgcagat caacccgaag aggtatgtat aaaagttttt CD 301 gtatcgaggc aaaatcctga aattccatct gttttctgga tctggaaaag CD 351 tgctgatttt caggaacggg aatcttatga tatgttggga atttctcacg CD 401 aaagtcatcc gcatcttaaa cgtatattga tgcccgctag ttggatcggt CD 451 tggcctttac gcaaagatta cattgtacct aatttctatg agctacaaga CD 501 tgcatattga FT EDITED CDNA CD 1 atgttagata cttctacgaa taatactact gaaatgcagg gtcgattatc CD 51 tgcttggcta gcgaaacata gattagctca tagacctttg ggtttcgatt CD 101 accaaggtgt agaaacttta caaattagat ctgaggattg gctttcTgta CD 151 gcggtagctt tatatgttta tggTtTtaac tatctTcgtt cTcaatgtgc CD 201 ttatgacgta gcgccagggg gactactagc tagtgtatat cactttacga CD 251 aagtacaaga caatgcagat caacccgaag aggtatgtat aaaagttttt CD 301 gtatcgaggc aaaatcctga aattccatct gttttctgga tctggaaaag CD 351 tgctgatttt caggaacggg aatcttatga tatgttggga atttctcacg CD 401 aaagtcatcc gcatcttaaa cgtatattga tgcccgctag ttggatcggt CD 451 tggcctttac gcaaagatta cattgtacct aatttctatg agctacaaga CD 501 tgcatattga SQ SEQUENCE 170 AA; MLDTSTNNTT EMQGRLSAWL AKHRLAHRPL GFDYQGVETL QIRSEDWLSV AVALYVYGFN YLRSQCAYDV APGGLLASVY HFTKVQDNAD QPEEVCIKVF VSRQNPEIPS VFWIWKSADF QERESYDMLG ISHESHPHLK RILMPASWIG WPLRKDYIVP NFYELQDAY* // ID AB299142_3 STANDARD; PRT; 260 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : ndhK FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50114.1 FT PROTEIN_NAME : NADH dehydrogenase 27 kD subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3333 - 4112 FT DIRECTIONS : negative FT EDITING : 34 T(aCt) -> I(aTt) FT EDITING : 60 H(Cac) -> Y(Tac) FT EDITING : 64 R(Cgt) -> C(Tgt) FT EDITING : 95 P(cCc) -> L(cTc) FT EDITING : 97 T(aCa) -> I(aTa) FT EDITING : 104 T(aCg) -> M(aTg) FT EDITING : 126 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 780 NT; CD 1 atggtcttag tttccaaata tttaaattgt gaaaataaaa tcgagaattc CD 51 tatgaagcca cttataaatt ctatagagtc atctttactt gatcaaacaa CD 101 Ctccaaattc aattattcta actaccttca atgatttctc aaattgggct CD 151 aggctttcca gtctatggcc acttctcCac ggtactagtC gttgtttcat CD 201 cgaatttgct tcattaatcg gttcgcgatt cgacttcgat cgctacggtt CD 251 tggtaccaag atctagtcct agacaagctg accCcgtaaC aacggctggc CD 301 actgtaacca Cgaaaatggc tccgtctctg gtaagactat acgaacaaat CD 351 gcctgagcct aaatatgtta ttgctaCggg agcatgtacc atcacgggag CD 401 gtatgtttag tacagattct tatagtactg ttcgtggagt agataaattg CD 451 attcctgtag atatttattt acctggttgt ccaccgaaac cagaagctat CD 501 tatagatgct ataataaaac ttcgtaaaaa agtggctcag gagacatatg CD 551 gggatagaac taagcttcga caaggaaata ggtatttgac gttgaatcat CD 601 caatttcagt ttatacctac tcttagtacc gagcgatgtg gtgaacattt CD 651 acaccataag tttccaaaat ctcaacttaa ttcaacttcg gagataactt CD 701 ctaaaacaat tcagaaatat agtgattcag tatcctctcc ggaatatgga CD 751 aatgatgagg aggaattttc ggagaaatga FT EDITED CDNA CD 1 atggtcttag tttccaaata tttaaattgt gaaaataaaa tcgagaattc CD 51 tatgaagcca cttataaatt ctatagagtc atctttactt gatcaaacaa CD 101 Ttccaaattc aattattcta actaccttca atgatttctc aaattgggct CD 151 aggctttcca gtctatggcc acttctcTac ggtactagtT gttgtttcat CD 201 cgaatttgct tcattaatcg gttcgcgatt cgacttcgat cgctacggtt CD 251 tggtaccaag atctagtcct agacaagctg accTcgtaaT aacggctggc CD 301 actgtaacca Tgaaaatggc tccgtctctg gtaagactat acgaacaaat CD 351 gcctgagcct aaatatgtta ttgctaTggg agcatgtacc atcacgggag CD 401 gtatgtttag tacagattct tatagtactg ttcgtggagt agataaattg CD 451 attcctgtag atatttattt acctggttgt ccaccgaaac cagaagctat CD 501 tatagatgct ataataaaac ttcgtaaaaa agtggctcag gagacatatg CD 551 gggatagaac taagcttcga caaggaaata ggtatttgac gttgaatcat CD 601 caatttcagt ttatacctac tcttagtacc gagcgatgtg gtgaacattt CD 651 acaccataag tttccaaaat ctcaacttaa ttcaacttcg gagataactt CD 701 ctaaaacaat tcagaaatat agtgattcag tatcctctcc ggaatatgga CD 751 aatgatgagg aggaattttc ggagaaatga SQ SEQUENCE 260 AA; MVLVSKYLNC ENKIENSMKP LINSIESSLL DQTIPNSIIL TTFNDFSNWA RLSSLWPLLY GTSCCFIEFA SLIGSRFDFD RYGLVPRSSP RQADLVITAG TVTMKMAPSL VRLYEQMPEP KYVIAMGACT ITGGMFSTDS YSTVRGVDKL IPVDIYLPGC PPKPEAIIDA IIKLRKKVAQ ETYGDRTKLR QGNRYLTLNH QFQFIPTLST ERCGEHLHHK FPKSQLNSTS EITSKTIQKY SDSVSSPEYG NDEEEFSEK* // ID AB299142_4 STANDARD; PRT; 121 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : ndhC FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50115.1 FT PROTEIN_NAME : NADH dehydrogenase ND3 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 4103 - 4465 FT DIRECTIONS : negative FT EDITING : 2 F(ttC) -> F(ttT) FT EDITING : 67 S(tCa) -> L(tTa) FT EDITING : 71 T(aCt) -> I(aTt) FT EDITING : 72 F(ttC) -> F(ttT) FT EDITING : 78 S(tCt) -> F(tTt) FT EDITING : 98 S(tCg) -> L(tTg) FT EDITING : 104 S(tCa) -> L(tTa) FT EDITING : 108 S(tCg) -> L(tTg) FT EDITING : 117 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 363 NT; CD 1 atgttCttac ttcccaaaaa cgattctctt tggatttttt tgctaataac CD 51 tagtcttatt cctataacag ctttttctat ttccaaaatt atagcacctg CD 101 ttagtgaggg accagaaaaa tttactagtt atgaatcagg tatagaacca CD 151 atgggagatg cttggatcca attccatatt cgttattaca tgtttgcctC CD 201 agttcttgtt aCtttCgatg tagaaacagt ttCtctctat ccatgggcta CD 251 tgagttttaa tgaattgggt atatctgctt ttatcgaagc gtCgattttc CD 301 gtgtctattt Caatcattgg ttCggtttat gcgtggcgga aaggagcatC CD 351 ggaatggtct tag FT EDITED CDNA CD 1 atgttTttac ttcccaaaaa cgattctctt tggatttttt tgctaataac CD 51 tagtcttatt cctataacag ctttttctat ttccaaaatt atagcacctg CD 101 ttagtgaggg accagaaaaa tttactagtt atgaatcagg tatagaacca CD 151 atgggagatg cttggatcca attccatatt cgttattaca tgtttgcctT CD 201 agttcttgtt aTtttTgatg tagaaacagt ttTtctctat ccatgggcta CD 251 tgagttttaa tgaattgggt atatctgctt ttatcgaagc gtTgattttc CD 301 gtgtctattt Taatcattgg ttTggtttat gcgtggcgga aaggagcatT CD 351 ggaatggtct tag SQ SEQUENCE 121 AA; MFLLPKNDSL WIFLLITSLI PITAFSISKI IAPVSEGPEK FTSYESGIEP MGDAWIQFHI RYYMFALVLV IFDVETVFLY PWAMSFNELG ISAFIEALIF VSILIIGLVY AWRKGALEWS * // ID AB299142_5 STANDARD; PRT; 139 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : atpE FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50116.1 FT PROTEIN_NAME : ATP synthase epsilon subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 8918 - 9334 FT DIRECTIONS : negative FT EDITING : 24 P(cCa) -> L(cTa) FT EDITING : 40 P(cCt) -> L(cTt) FT EDITING : 44 P(cCg) -> L(cTg) FT EDITING : 119 S(tCt) -> F(tTt) FT EDITING : 134 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 417 NT; CD 1 atgaccctaa atcttcgtgt aatggctcct aatcgaattg tttggaattc CD 51 agaagttcaa gagattattc Catctaccaa tagtggtcaa attggcgtat CD 101 tacctaacca tgccccacCt ctcacagcgc Cggatatagg aattataaag CD 151 atacgactta atggacaatg gttcactatg gcgttgatgg gcggttttgc CD 201 tatgatagac aataacagaa tgaccatatt ggtgaatgaa gcggaaaaag CD 251 ctattgagat agatcctcga gaggcccaag atacttttca aatggctcgg CD 301 gacaagctag ctcaagctgg aggtagaaaa caagttattg aagctaattt CD 351 agcctCtaaa agagccaaag cacggttaga agctatcaac gctacttctt CD 401 Cttccgtctc taattaa FT EDITED CDNA CD 1 atgaccctaa atcttcgtgt aatggctcct aatcgaattg tttggaattc CD 51 agaagttcaa gagattattc Tatctaccaa tagtggtcaa attggcgtat CD 101 tacctaacca tgccccacTt ctcacagcgc Tggatatagg aattataaag CD 151 atacgactta atggacaatg gttcactatg gcgttgatgg gcggttttgc CD 201 tatgatagac aataacagaa tgaccatatt ggtgaatgaa gcggaaaaag CD 251 ctattgagat agatcctcga gaggcccaag atacttttca aatggctcgg CD 301 gacaagctag ctcaagctgg aggtagaaaa caagttattg aagctaattt CD 351 agcctTtaaa agagccaaag cacggttaga agctatcaac gctacttctt CD 401 Tttccgtctc taattaa SQ SEQUENCE 139 AA; MTLNLRVMAP NRIVWNSEVQ EIILSTNSGQ IGVLPNHAPL LTALDIGIIK IRLNGQWFTM ALMGGFAMID NNRMTILVNE AEKAIEIDPR EAQDTFQMAR DKLAQAGGRK QVIEANLAFK RAKARLEAIN ATSFSVSN* // ID AB299142_6 STANDARD; PRT; 493 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : atpB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50117.1 FT PROTEIN_NAME : ATP synthase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 9342 - 10820 FT DIRECTIONS : negative FT EDITING : 13 P(cCc) -> L(cTc) FT EDITING : 33 S(tCc) -> F(tTc) FT EDITING : 44 P(Cct) -> S(Tct) FT EDITING : 75 A(gCg) -> V(gTg) FT EDITING : 77 T(aCg) -> M(aTg) FT EDITING : 96 S(tCa) -> L(tTa) FT EDITING : 105 P(cCt) -> L(cTt) FT EDITING : 119 S(tCa) -> L(tTa) FT EDITING : 137 S(tCt) -> F(tTt) FT EDITING : 157 S(tCa) -> L(tTa) FT EDITING : 168 S(tCa) -> L(tTa) FT EDITING : 181 T(aCg) -> M(aTg) FT EDITING : 197 S(tCc) -> F(tTc) FT EDITING : 210 P(cCt) -> L(cTt) FT EDITING : 214 T(aCg) -> M(aTg) FT EDITING : 249 S(tCa) -> L(tTa) FT EDITING : 252 P(cCa) -> L(cTa) FT EDITING : 258 S(tCt) -> F(tTt) FT EDITING : 268 S(tCa) -> L(tTa) FT EDITING : 274 S(tCt) -> F(tTt) FT EDITING : 276 S(tCt) -> F(tTt) FT EDITING : 286 P(cCa) -> L(cTa) FT EDITING : 296 H(Cat) -> Y(Tat) FT EDITING : 300 P(cCg) -> L(cTg) FT EDITING : 307 S(tCg) -> L(tTg) FT EDITING : 321 P(Cca) -> S(Tca) FT EDITING : 326 H(Cat) -> Y(Tat) FT EDITING : 350 P(cCa) -> L(cTa) FT EDITING : 366 S(tCa) -> L(tTa) FT EDITING : 370 P(Cct) -> S(Tct) FT EDITING : 373 P(cCt) -> L(cTt) FT EDITING : 411 S(tCa) -> L(tTa) FT EDITING : 439 S(tCt) -> F(tTt) FT EDITING : 449 P(cCc) -> L(cTc) FT EDITING : 460 P(cCt) -> L(cTt) FT EDITING : 472 S(tCt) -> F(tTt) FT EDITING : 473 H(Cat) -> Y(Tat) FT EDITING : 474 P(cCg) -> L(cTg) FT EDITING : 488 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1479 NT; CD 1 atgaaaacaa atcctcgtgc ttttgggatt tctacacCcg ttgccgagaa CD 51 tgtaggacgt attactcaga ttattggtcc cgtattagat gtaacttCct CD 101 ccccgggtaa gatgcctaat atttacaacC ctctgatagt aaagggccaa CD 151 aatacagctg gtcagggaat taatgttacg tgtgaggtac aacagttatt CD 201 aggaaataat aaggttagag ctgCggctaC gagtgctaca gatggtttga CD 251 tgagaggaat gaaagttatt gatacaggag ctccttCaag tgttccggtt CD 301 ggtgaagcga cccCtggacg aatctttaac gttctcggag aacctgttga CD 351 taattCaggt cctgtagatg ttagtacaac atttcctatt catagatctg CD 401 ctcctgcctC tacacagtta gatacgaaat tatccatttt tgaaacagga CD 451 attaaagtag tagatctttC agctccttat cgccgtggag gaaaaattgg CD 501 atCatttgga ggagctgggg taggaaaaac agtacttatc aCggagctaa CD 551 ttaataatat tgctaaagct catggcggtg tatccgtatC cggtggagtg CD 601 ggagaacgta cccgtgaggg aaatgatcCt tacatggaga Cgaaggaatc CD 651 gaaggtaatt aatgaacaaa acatttcgga atccaaagtt gcactagttt CD 701 atggtcagat gaatgaacca ccaggggctc gtatgagagt cggttCaact CD 751 gctcCaacca tggctgaata ttCtcgagac gttaataagc aagatgtact CD 801 ttCattcatc gacaatattt CtcgttCtgt ccaagcagga tcagaagttt CD 851 ctgctcCatt aggtagaatg ccgtctgctg taggtCatca accaactcCg CD 901 agcacagaga tgggtacttC gcaagaaaga attacttcca caaaagaggg CD 951 atccataacc Ccaattcaag cagttCatgt acctgcagat gatttgactg CD 1001 atccagctcc cgctacgacc ttcgcacacc tagatgcaac tactgtacCa CD 1051 tcgagaggat tagctgccaa aggtatctat ccagccgtag atccctCaga CD 1101 ttcaactCct actatgcCtc aaccctggat cgtgggcgag gaacattacg CD 1151 aaacggcaca aggcgttaag caaacgttgc aacgttataa agaactgcaa CD 1201 gacattatag ctattcttgg actggacgaa tCatcagaag aggaccgttt CD 1251 gaccgtagcg agagcacgga aaattgaacg tttcttatcc caaccttttt CD 1301 tcgtcgcgga ggtatCtaca ggttccccag gtaaatatgt tagtcCcgta CD 1351 gaaacaatta aaggttttca aatgatccCt tccggagaat tggatagtct CD 1401 tcccgaacag gcttCtCatc Cggtaggtaa cattgatgaa gctactgcga CD 1451 aggctgcaac ctCacaggtg gagaattga FT EDITED CDNA CD 1 atgaaaacaa atcctcgtgc ttttgggatt tctacacTcg ttgccgagaa CD 51 tgtaggacgt attactcaga ttattggtcc cgtattagat gtaacttTct CD 101 ccccgggtaa gatgcctaat atttacaacT ctctgatagt aaagggccaa CD 151 aatacagctg gtcagggaat taatgttacg tgtgaggtac aacagttatt CD 201 aggaaataat aaggttagag ctgTggctaT gagtgctaca gatggtttga CD 251 tgagaggaat gaaagttatt gatacaggag ctccttTaag tgttccggtt CD 301 ggtgaagcga cccTtggacg aatctttaac gttctcggag aacctgttga CD 351 taattTaggt cctgtagatg ttagtacaac atttcctatt catagatctg CD 401 ctcctgcctT tacacagtta gatacgaaat tatccatttt tgaaacagga CD 451 attaaagtag tagatctttT agctccttat cgccgtggag gaaaaattgg CD 501 atTatttgga ggagctgggg taggaaaaac agtacttatc aTggagctaa CD 551 ttaataatat tgctaaagct catggcggtg tatccgtatT cggtggagtg CD 601 ggagaacgta cccgtgaggg aaatgatcTt tacatggaga Tgaaggaatc CD 651 gaaggtaatt aatgaacaaa acatttcgga atccaaagtt gcactagttt CD 701 atggtcagat gaatgaacca ccaggggctc gtatgagagt cggttTaact CD 751 gctcTaacca tggctgaata ttTtcgagac gttaataagc aagatgtact CD 801 ttTattcatc gacaatattt TtcgttTtgt ccaagcagga tcagaagttt CD 851 ctgctcTatt aggtagaatg ccgtctgctg taggtTatca accaactcTg CD 901 agcacagaga tgggtacttT gcaagaaaga attacttcca caaaagaggg CD 951 atccataacc Tcaattcaag cagttTatgt acctgcagat gatttgactg CD 1001 atccagctcc cgctacgacc ttcgcacacc tagatgcaac tactgtacTa CD 1051 tcgagaggat tagctgccaa aggtatctat ccagccgtag atccctTaga CD 1101 ttcaactTct actatgcTtc aaccctggat cgtgggcgag gaacattacg CD 1151 aaacggcaca aggcgttaag caaacgttgc aacgttataa agaactgcaa CD 1201 gacattatag ctattcttgg actggacgaa tTatcagaag aggaccgttt CD 1251 gaccgtagcg agagcacgga aaattgaacg tttcttatcc caaccttttt CD 1301 tcgtcgcgga ggtatTtaca ggttccccag gtaaatatgt tagtcTcgta CD 1351 gaaacaatta aaggttttca aatgatccTt tccggagaat tggatagtct CD 1401 tcccgaacag gcttTtTatc Tggtaggtaa cattgatgaa gctactgcga CD 1451 aggctgcaac ctTacaggtg gagaattga SQ SEQUENCE 493 AA; MKTNPRAFGI STLVAENVGR ITQIIGPVLD VTFSPGKMPN IYNSLIVKGQ NTAGQGINVT CEVQQLLGNN KVRAVAMSAT DGLMRGMKVI DTGAPLSVPV GEATLGRIFN VLGEPVDNLG PVDVSTTFPI HRSAPAFTQL DTKLSIFETG IKVVDLLAPY RRGGKIGLFG GAGVGKTVLI MELINNIAKA HGGVSVFGGV GERTREGNDL YMEMKESKVI NEQNISESKV ALVYGQMNEP PGARMRVGLT ALTMAEYFRD VNKQDVLLFI DNIFRFVQAG SEVSALLGRM PSAVGYQPTL STEMGTLQER ITSTKEGSIT SIQAVYVPAD DLTDPAPATT FAHLDATTVL SRGLAAKGIY PAVDPLDSTS TMLQPWIVGE EHYETAQGVK QTLQRYKELQ DIIAILGLDE LSEEDRLTVA RARKIERFLS QPFFVAEVFT GSPGKYVSLV ETIKGFQMIL SGELDSLPEQ AFYLVGNIDE ATAKAATLQV EN* // ID AB299142_8 STANDARD; PRT; 317 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : accD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50119.1 FT PROTEIN_NAME : acetyl-CoA carboxylase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 13428 - 14378 FT DIRECTIONS : positive FT EDITING : 6 R(Cgg) -> W(Tgg) FT EDITING : 31 S(agC) -> S(agT) FT EDITING : 51 R(Cgt) -> C(Tgt) FT EDITING : 88 S(tCa) -> L(tTa) FT EDITING : 94 R(Cgg) -> W(Tgg) FT EDITING : 149 T(aCg) -> M(aTg) FT EDITING : 151 S(tCt) -> F(tTt) FT EDITING : 153 S(tCt) -> F(tTt) FT EDITING : 169 P(cCt) -> L(cTt) FT EDITING : 170 I(atC) -> I(atT) FT EDITING : 198 P(cCa) -> L(cTa) FT EDITING : 206 P(Ccc) -> S(Tcc) FT EDITING : 208 S(tCa) -> L(tTa) FT EDITING : 223 P(cCC) -> L(cTT) FT EDITING : 237 T(aCg) -> M(aTg) FT EDITING : 252 S(tCt) -> F(tTt) FT EDITING : 284 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 951 NT; CD 1 atgtctctaa tgaatCggtt cgaagacaaa cgccgattcg gtggattaat CD 51 cggagctttt attgaaaagg ctactaaagg atatgttctc agCgaaaggg CD 101 aaaaagatcg atatataaaa attgatacta ctaaagggtt atggactcga CD 151 Cgtgacaatt gtgagaacat gctctatgtt agattcctga gacaaaatag CD 201 gcgcatttgt gaagaatgtg ggtatcattt gcaaatgagt agtacagaaa CD 251 gaattgaact ttCaattgat cgtgggactC ggcatcctat ggatgaagac CD 301 atggttgctc gagatgttct tagattttct gatgaagatt cttataagaa CD 351 tcgtgttact ttttatcaga aacgaacggg tttgactgat gctattcaaa CD 401 caggcatagg gaaactagat gggactcctg ttgctcttgg agttaCggat CD 451 tCtcagtCta tgggaggtag tatgggttct gtggtaggtg aaaagattac CD 501 tcgtcCtatC gaatatgcta ccagaaaatc tatgccgtta ataatagtgt CD 551 gttcctccgg aggagcacgc atgcaagaag gaactttaag tcCaatgcaa CD 601 atggctaaga tttctCccgt ttCacaaatc catcaagctc aaaaaaggtt CD 651 attatatata cctattcCCa catatcctac aactggtgga gttactgcta CD 701 gttttggtaC gttaggagac attattattg ctgaacccaa agcatacatt CD 751 gcatCtgcgg gtaaaagagt aatcgaacaa acattacgtc aaaaaatacc CD 801 tgatggtttt caagttgctg aatctttatt tgatcatggt ttactcgatt CD 851 Cgattgttcc acgtaacctc tcgaaaggcg ttttgagtga aatatttgaa CD 901 ctttatggtt cagctccttg taaggaacgt aataattatt attttagata CD 951 a FT EDITED CDNA CD 1 atgtctctaa tgaatTggtt cgaagacaaa cgccgattcg gtggattaat CD 51 cggagctttt attgaaaagg ctactaaagg atatgttctc agTgaaaggg CD 101 aaaaagatcg atatataaaa attgatacta ctaaagggtt atggactcga CD 151 Tgtgacaatt gtgagaacat gctctatgtt agattcctga gacaaaatag CD 201 gcgcatttgt gaagaatgtg ggtatcattt gcaaatgagt agtacagaaa CD 251 gaattgaact ttTaattgat cgtgggactT ggcatcctat ggatgaagac CD 301 atggttgctc gagatgttct tagattttct gatgaagatt cttataagaa CD 351 tcgtgttact ttttatcaga aacgaacggg tttgactgat gctattcaaa CD 401 caggcatagg gaaactagat gggactcctg ttgctcttgg agttaTggat CD 451 tTtcagtTta tgggaggtag tatgggttct gtggtaggtg aaaagattac CD 501 tcgtcTtatT gaatatgcta ccagaaaatc tatgccgtta ataatagtgt CD 551 gttcctccgg aggagcacgc atgcaagaag gaactttaag tcTaatgcaa CD 601 atggctaaga tttctTccgt ttTacaaatc catcaagctc aaaaaaggtt CD 651 attatatata cctattcTTa catatcctac aactggtgga gttactgcta CD 701 gttttggtaT gttaggagac attattattg ctgaacccaa agcatacatt CD 751 gcatTtgcgg gtaaaagagt aatcgaacaa acattacgtc aaaaaatacc CD 801 tgatggtttt caagttgctg aatctttatt tgatcatggt ttactcgatt CD 851 Tgattgttcc acgtaacctc tcgaaaggcg ttttgagtga aatatttgaa CD 901 ctttatggtt cagctccttg taaggaacgt aataattatt attttagata CD 951 a SQ SEQUENCE 317 AA; MSLMNWFEDK RRFGGLIGAF IEKATKGYVL SEREKDRYIK IDTTKGLWTR CDNCENMLYV RFLRQNRRIC EECGYHLQMS STERIELLID RGTWHPMDED MVARDVLRFS DEDSYKNRVT FYQKRTGLTD AIQTGIGKLD GTPVALGVMD FQFMGGSMGS VVGEKITRLI EYATRKSMPL IIVCSSGGAR MQEGTLSLMQ MAKISSVLQI HQAQKRLLYI PILTYPTTGG VTASFGMLGD IIIAEPKAYI AFAGKRVIEQ TLRQKIPDGF QVAESLFDHG LLDLIVPRNL SKGVLSEIFE LYGSAPCKER NNYYFR* // ID AB299142_9 STANDARD; PRT; 37 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psaI FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50120.1 FT PROTEIN_NAME : PSI I-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 14714 - 14824 FT DIRECTIONS : positive FT EDITING : 3 A(gcC) -> A(gcT) FT EDITING : 10 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 111 NT; CD 1 atgacagcCt cttacttacc ttccatttCt gtgcctctag taggtttagt CD 51 ctttccagca attacaatgg cttctttgtt tatatatatc gaacaagacg CD 101 aaatagtata a FT EDITED CDNA CD 1 atgacagcTt cttacttacc ttccatttTt gtgcctctag taggtttagt CD 51 ctttccagca attacaatgg cttctttgtt tatatatatc gaacaagacg CD 101 aaatagtata a SQ SEQUENCE 37 AA; MTASYLPSIF VPLVGLVFPA ITMASLFIYI EQDEIV* // ID AB299142_10 STANDARD; PRT; 185 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : ycf4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50121.1 FT PROTEIN_NAME : photosystem I assembly protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 15194 - 15748 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 43 H(Cac) -> Y(Tac) FT EDITING : 82 R(Cgt) -> C(Tgt) FT EDITING : 86 R(Cgg) -> W(Tgg) FT EDITING : 95 S(tCc) -> F(tTc) FT EDITING : 120 S(tCt) -> F(tTt) FT EDITING : 163 P(cCg) -> L(cTg) FT EDITING : 176 S(tCc) -> F(tTc) FT EDITING : 177 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 555 NT; CD 1 aCgaattggc aatctgaatg gcttcgagta gaacctataa taggttctag CD 51 aagaataagt aatttttgct gggcgtgcat tattccgttg ggtgcattag CD 101 gattcttttc agttggaatt tctagtCact tcggtaaaga tttaataccc CD 151 tttctatcat cccagcaaat tctttttgtc ccacaaggaa ttgtaatgtg CD 201 cttttatggt attgcaggtc tgtttctcag cctctattta tggCgtacaa CD 251 ttttgCggag tgtaggtagt ggctacaacc gatCcgataa acgagaaaaa CD 301 atcgtttgtc tttttcgttg gggattcccc ggagaaaatc gtcgtattcg CD 351 tatccaatCt ctcatgaaag atatccaagc aatacgtatg gagattcggg CD 401 aaggtattta tccccgtcgt atcctttata tgaaaataaa aggtcaacaa CD 451 gatgttcctt taactcgtat tgaggaaaac ttaactcCgg gagaaatgga CD 501 ggaaaaagct gcggagttgg ctcgatCctC gcgcgtatca atcgaaggac CD 551 tctaa FT EDITED CDNA CD 1 aTgaattggc aatctgaatg gcttcgagta gaacctataa taggttctag CD 51 aagaataagt aatttttgct gggcgtgcat tattccgttg ggtgcattag CD 101 gattcttttc agttggaatt tctagtTact tcggtaaaga tttaataccc CD 151 tttctatcat cccagcaaat tctttttgtc ccacaaggaa ttgtaatgtg CD 201 cttttatggt attgcaggtc tgtttctcag cctctattta tggTgtacaa CD 251 ttttgTggag tgtaggtagt ggctacaacc gatTcgataa acgagaaaaa CD 301 atcgtttgtc tttttcgttg gggattcccc ggagaaaatc gtcgtattcg CD 351 tatccaatTt ctcatgaaag atatccaagc aatacgtatg gagattcggg CD 401 aaggtattta tccccgtcgt atcctttata tgaaaataaa aggtcaacaa CD 451 gatgttcctt taactcgtat tgaggaaaac ttaactcTgg gagaaatgga CD 501 ggaaaaagct gcggagttgg ctcgatTctT gcgcgtatca atcgaaggac CD 551 tctaa SQ SEQUENCE 185 AA; MNWQSEWLRV EPIIGSRRIS NFCWACIIPL GALGFFSVGI SSYFGKDLIP FLSSQQILFV PQGIVMCFYG IAGLFLSLYL WCTILWSVGS GYNRFDKREK IVCLFRWGFP GENRRIRIQF LMKDIQAIRM EIREGIYPRR ILYMKIKGQQ DVPLTRIEEN LTLGEMEEKA AELARFLRVS IEGL* // ID AB299142_11 STANDARD; PRT; 511 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : ycf10 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50122.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 15893 - 17425 FT DIRECTIONS : positive FT EDITING : 83 S(tCa) -> L(tTa) FT EDITING : 306 S(tCt) -> F(tTt) FT EDITING : 399 A(gcC) -> A(gcT) FT EDITING : 407 P(cCa) -> L(cTa) FT EDITING : 415 S(tCa) -> L(tTa) FT EDITING : 433 S(tCt) -> F(tTt) FT EDITING : 436 P(cCc) -> L(cTc) FT EDITING : 437 P(cCa) -> L(cTa) FT EDITING : 441 P(cCa) -> L(cTa) FT EDITING : 442 R(Cgt) -> C(Tgt) FT EDITING : 489 R(Cgg) -> W(Tgg) FT EDITING : 508 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1533 NT; CD 1 atgaaatcat actgggcaca aaattcttgt tggttattaa atactccata CD 51 tcgttcctta gagagagctt atagagcgag caaacgaata cgatatataa CD 101 agaaaaatta tatgtgttat aaaggtatga tttcatcttc ggtacggtct CD 151 tggcaagcta taatgctata tatgaatacg aaattcaata attatgtatt CD 201 cataatatat tggagtctct tggaatgtag aattagcatg tatttctCaa CD 251 acttcttgaa taattcaata tttagaatat ttgaaaaaat ttctattttt CD 301 tctccaaaag cagctaatga gtattcgttt tccgtgagtc ttcatcaaca CD 351 tttttggatt ctctcaaatc tttcttttta taaggtttgg aataatctct CD 401 cgaatgtttt ttctttctct cctctccctc tcgattctac cggaaaattc CD 451 gttcaaaaga ctagtagaat ttccaaacga tatagatccg atcagagaag CD 501 tgaaaaggac tttaaagcta aaaacttttc tatttcgagt gattcagttg CD 551 agagggattc gaggaagatt gaacagatga ataagaaatt agcttggatc CD 601 gaagcaactt taaatgattt ggatacttgg aaacggtatc attttctttc CD 651 tgcttcttcc tccgagaaag aagaaacttt agaaaatcct ttttctttct CD 701 ccaattccaa aaattctatt actaccgcaa cagcttatga atctataggt CD 751 cttgtacctc gctccataac ccgtacctta tccggatttc agacagagtt CD 801 gacgggtcaa tcaagttcat tagtacttca agaatttcga gtggctaaat CD 851 atcaagcatt ggcttctcta caatatatgg gatgtttact atttctcccc CD 901 tggggaatct caatttCtct gaaagaatat tttttagaac cttgggttaa CD 951 gatttggtgg aatacatgtc aatcccaaat ttttcttaat tctcttcaag CD 1001 aagaaatagc attgaaacgg cttcaggagg tagaggaact tgtttggtta CD 1051 gataaagtga tggcgaattc ctcgaaagtt cagtcacaag atcttgatgt CD 1101 agaaattcac gaaaaaacaa ttcaattact aaaaacgtac aatggagata CD 1151 gtattcagac tattctacat ttattaacag atattatttg tttcgcCact CD 1201 ttgagtgttt cgtttattcC aggtaaagaa agacttgcta tttCaaattc CD 1251 ttgggttcaa gaattatttt atagcttgag tgatacgatg aaagcttCtt CD 1301 tcattcCccC attaactgat cCaCgtatcg gatttcattc gcctcatggc CD 1351 tgggaaatag ttataggttc cctcttagaa catttaggat tcgctcataa CD 1401 caaacatata atatcctgtt ttgtttcaac ctttccagtc attctagata CD 1451 cagtttctaa atatCggatt tttcgtcatt taaatcgtat atctccctct CD 1501 attgtagcaa cttatcatac gaCgaatgaa taa FT EDITED CDNA CD 1 atgaaatcat actgggcaca aaattcttgt tggttattaa atactccata CD 51 tcgttcctta gagagagctt atagagcgag caaacgaata cgatatataa CD 101 agaaaaatta tatgtgttat aaaggtatga tttcatcttc ggtacggtct CD 151 tggcaagcta taatgctata tatgaatacg aaattcaata attatgtatt CD 201 cataatatat tggagtctct tggaatgtag aattagcatg tatttctTaa CD 251 acttcttgaa taattcaata tttagaatat ttgaaaaaat ttctattttt CD 301 tctccaaaag cagctaatga gtattcgttt tccgtgagtc ttcatcaaca CD 351 tttttggatt ctctcaaatc tttcttttta taaggtttgg aataatctct CD 401 cgaatgtttt ttctttctct cctctccctc tcgattctac cggaaaattc CD 451 gttcaaaaga ctagtagaat ttccaaacga tatagatccg atcagagaag CD 501 tgaaaaggac tttaaagcta aaaacttttc tatttcgagt gattcagttg CD 551 agagggattc gaggaagatt gaacagatga ataagaaatt agcttggatc CD 601 gaagcaactt taaatgattt ggatacttgg aaacggtatc attttctttc CD 651 tgcttcttcc tccgagaaag aagaaacttt agaaaatcct ttttctttct CD 701 ccaattccaa aaattctatt actaccgcaa cagcttatga atctataggt CD 751 cttgtacctc gctccataac ccgtacctta tccggatttc agacagagtt CD 801 gacgggtcaa tcaagttcat tagtacttca agaatttcga gtggctaaat CD 851 atcaagcatt ggcttctcta caatatatgg gatgtttact atttctcccc CD 901 tggggaatct caatttTtct gaaagaatat tttttagaac cttgggttaa CD 951 gatttggtgg aatacatgtc aatcccaaat ttttcttaat tctcttcaag CD 1001 aagaaatagc attgaaacgg cttcaggagg tagaggaact tgtttggtta CD 1051 gataaagtga tggcgaattc ctcgaaagtt cagtcacaag atcttgatgt CD 1101 agaaattcac gaaaaaacaa ttcaattact aaaaacgtac aatggagata CD 1151 gtattcagac tattctacat ttattaacag atattatttg tttcgcTact CD 1201 ttgagtgttt cgtttattcT aggtaaagaa agacttgcta tttTaaattc CD 1251 ttgggttcaa gaattatttt atagcttgag tgatacgatg aaagcttTtt CD 1301 tcattcTccT attaactgat cTaTgtatcg gatttcattc gcctcatggc CD 1351 tgggaaatag ttataggttc cctcttagaa catttaggat tcgctcataa CD 1401 caaacatata atatcctgtt ttgtttcaac ctttccagtc attctagata CD 1451 cagtttctaa atatTggatt tttcgtcatt taaatcgtat atctccctct CD 1501 attgtagcaa cttatcatac gaTgaatgaa taa SQ SEQUENCE 511 AA; MKSYWAQNSC WLLNTPYRSL ERAYRASKRI RYIKKNYMCY KGMISSSVRS WQAIMLYMNT KFNNYVFIIY WSLLECRISM YFLNFLNNSI FRIFEKISIF SPKAANEYSF SVSLHQHFWI LSNLSFYKVW NNLSNVFSFS PLPLDSTGKF VQKTSRISKR YRSDQRSEKD FKAKNFSISS DSVERDSRKI EQMNKKLAWI EATLNDLDTW KRYHFLSASS SEKEETLENP FSFSNSKNSI TTATAYESIG LVPRSITRTL SGFQTELTGQ SSSLVLQEFR VAKYQALASL QYMGCLLFLP WGISIFLKEY FLEPWVKIWW NTCQSQIFLN SLQEEIALKR LQEVEELVWL DKVMANSSKV QSQDLDVEIH EKTIQLLKTY NGDSIQTILH LLTDIICFAT LSVSFILGKE RLAILNSWVQ ELFYSLSDTM KAFFILLLTD LCIGFHSPHG WEIVIGSLLE HLGFAHNKHI ISCFVSTFPV ILDTVSKYWI FRHLNRISPS IVATYHTMNE * // ID AB299142_12 STANDARD; PRT; 322 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : petA FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50123.1 FT PROTEIN_NAME : cytochrome f FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 17634 - 18599 FT DIRECTIONS : positive FT EDITING : 60 R(Cgt) -> C(Tgt) FT EDITING : 81 P(CCt) -> F(TTt) FT EDITING : 111 P(cCt) -> L(cTt) FT EDITING : 113 S(tCa) -> L(tTa) FT EDITING : 164 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 966 NT; CD 1 atgcaaaaaa gaaatattag tcactggatg aggaagtggg tgattcgatc CD 51 ggttccgatc ctgatcgtga tgatgagaat aatagcttgg ccatctattt CD 101 ccgaagcata tccgatttat gcgcagcagg gttacgaaga tcctcgagaa CD 151 gcaactggcc gtattgtatg tgccaatCgt cacttggcta aaaaatccgt CD 201 ggatattgaa gttccacagt ctgtacttcc agacacagtt CCtgaggctg CD 251 ttgttaaaat tccgtatgat atacaagtaa aacaagtcct tgctaatggt CD 301 aaaaaaggag ctttgaatgt aggagctgtt cCtatttCac ctgagggatt CD 351 cgaattagcc cctcccgatc gtatccctcc cgaaatgaag ggaagaatag CD 401 gtaatcttta ttttcaacct tatcgtcccg acaaaagaaa tattcttgta CD 451 ataggtcccg ttcctggtaa aaaatatagt gaaattgtct Ctcccattct CD 501 ttcaccagat cctggtacta ataaagaagc tcacttcttg aaatatccca CD 551 tatatgtggg tggtaataga ggaaggggac aaatctatcc cgatggaagt CD 601 aaaagcaaca atactgttta taacgcttca gccacaggta aagtaagtag CD 651 aatcttacgt aaggaaaaag gtggatatga aataactatt gataatacat CD 701 tagatggtcg tcaagtaatg gatatcgtac ccccaggacc agaacttatt CD 751 atcacggaag gtgagtttat taaggtggat cagcctttaa ctaataatcc CD 801 caatgtaggt ggatttggtc aaggagatgc agaagtagta cttcaagatc CD 851 ctttacgtgt tcaaggtctt ttattattct ttgcatcagt tatattagca CD 901 caaatattct tagtacttaa aaagaaacaa tttgagaaag ttcaattagc CD 951 tgagatgaat ttttag FT EDITED CDNA CD 1 atgcaaaaaa gaaatattag tcactggatg aggaagtggg tgattcgatc CD 51 ggttccgatc ctgatcgtga tgatgagaat aatagcttgg ccatctattt CD 101 ccgaagcata tccgatttat gcgcagcagg gttacgaaga tcctcgagaa CD 151 gcaactggcc gtattgtatg tgccaatTgt cacttggcta aaaaatccgt CD 201 ggatattgaa gttccacagt ctgtacttcc agacacagtt TTtgaggctg CD 251 ttgttaaaat tccgtatgat atacaagtaa aacaagtcct tgctaatggt CD 301 aaaaaaggag ctttgaatgt aggagctgtt cTtatttTac ctgagggatt CD 351 cgaattagcc cctcccgatc gtatccctcc cgaaatgaag ggaagaatag CD 401 gtaatcttta ttttcaacct tatcgtcccg acaaaagaaa tattcttgta CD 451 ataggtcccg ttcctggtaa aaaatatagt gaaattgtct Ttcccattct CD 501 ttcaccagat cctggtacta ataaagaagc tcacttcttg aaatatccca CD 551 tatatgtggg tggtaataga ggaaggggac aaatctatcc cgatggaagt CD 601 aaaagcaaca atactgttta taacgcttca gccacaggta aagtaagtag CD 651 aatcttacgt aaggaaaaag gtggatatga aataactatt gataatacat CD 701 tagatggtcg tcaagtaatg gatatcgtac ccccaggacc agaacttatt CD 751 atcacggaag gtgagtttat taaggtggat cagcctttaa ctaataatcc CD 801 caatgtaggt ggatttggtc aaggagatgc agaagtagta cttcaagatc CD 851 ctttacgtgt tcaaggtctt ttattattct ttgcatcagt tatattagca CD 901 caaatattct tagtacttaa aaagaaacaa tttgagaaag ttcaattagc CD 951 tgagatgaat ttttag SQ SEQUENCE 322 AA; MQKRNISHWM RKWVIRSVPI LIVMMRIIAW PSISEAYPIY AQQGYEDPRE ATGRIVCANC HLAKKSVDIE VPQSVLPDTV FEAVVKIPYD IQVKQVLANG KKGALNVGAV LILPEGFELA PPDRIPPEMK GRIGNLYFQP YRPDKRNILV IGPVPGKKYS EIVFPILSPD PGTNKEAHFL KYPIYVGGNR GRGQIYPDGS KSNNTVYNAS ATGKVSRILR KEKGGYEITI DNTLDGRQVM DIVPPGPELI ITEGEFIKVD QPLTNNPNVG GFGQGDAEVV LQDPLRVQGL LLFFASVILA QIFLVLKKKQ FEKVQLAEMN F* // ID AB299142_13 STANDARD; PRT; 41 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbJ FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50124.1 FT PROTEIN_NAME : photosystem II J-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 19794 - 19916 FT DIRECTIONS : negative FT EDITING : 20 P(cCc) -> L(cTc) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 34 S(tcC) -> S(tcT) FT EDITING : 36 S(tCa) -> L(tTa) FT EDITING : 39 P(Ccc) -> S(Tcc) FT EDITING : 40 L(Cta) -> L(Tta) FT CODON_START : 1 CL CDNALEN 123 NT; CD 1 atggccaata ccaccggaag gattcctctg tggttaatag gtactgtagc CD 51 tggtatccCc gtgatcggtt Cagtaggcat ctttttctat ggctcatact CD 101 cCggatCagg gtcaCccCta tag FT EDITED CDNA CD 1 atggccaata ccaccggaag gattcctctg tggttaatag gtactgtagc CD 51 tggtatccTc gtgatcggtt Tagtaggcat ctttttctat ggctcatact CD 101 cTggatTagg gtcaTccTta tag SQ SEQUENCE 41 AA; MANTTGRIPL WLIGTVAGIL VIGLVGIFFY GSYSGLGSSL * // ID AB299142_14 STANDARD; PRT; 39 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50125.1 FT PROTEIN_NAME : photosystem II L-protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 20030 - 20146 FT DIRECTIONS : negative FT EDITING : 31 P(cCa) -> L(cTa) FT EDITING : 33 P(Cct) -> S(Tct) FT EDITING : 39 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 atgacacaac cgaacccaaa caaacaaagt gtagaattaa accgtaccag CD 51 cctctattgg ggattgttac ttattttcgt actggctgtt cCattcCcta CD 101 atcacttctt taatCaa FT EDITED CDNA CD 1 atgacacaac cgaacccaaa caaacaaagt gtagaattaa accgtaccag CD 51 cctctattgg ggattgttac ttattttcgt actggctgtt cTattcTcta CD 101 atcacttctt taatTaa SQ SEQUENCE 39 AA; MTQPNPNKQS VELNRTSLYW GLLLIFVLAV LFSNHFFN* // ID AB299142_15 STANDARD; PRT; 40 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbF FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50126.1 FT PROTEIN_NAME : photosystem II cytochrome b559 4 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 20169 - 20288 FT DIRECTIONS : negative FT EDITING : 26 L(Ctt) -> F(Ttt) FT EDITING : 28 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 120 NT; CD 1 atgactatag atagaaccta tccaattttc acagttaggt ggttggctgt CD 51 tcacggacta gctgtaccta cagttCtttt ctCaggatcg atatcggcaa CD 101 tgcagtttat ccaacgataa FT EDITED CDNA CD 1 atgactatag atagaaccta tccaattttc acagttaggt ggttggctgt CD 51 tcacggacta gctgtaccta cagttTtttt ctTaggatcg atatcggcaa CD 101 tgcagtttat ccaacgataa SQ SEQUENCE 40 AA; MTIDRTYPIF TVRWLAVHGL AVPTVFFLGS ISAMQFIQR* // ID AB299142_16 STANDARD; PRT; 84 AA. AC AB299142; DT Tue Jul 21 07:00:13 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : psbE FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50127.1 FT PROTEIN_NAME : photosystem II cytochrome b559 8 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 20298 - 20549 FT DIRECTIONS : negative FT EDITING : 20 R(Cgg) -> W(Tgg) FT EDITING : 30 S(tCg) -> L(tTg) FT EDITING : 35 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 252 NT; CD 1 atgtctggga atacgggaga gcgccctttc gccgacatca ttaccagtat CD 51 tcgatatCgg gtgattcata gcatcactat accctcctCg ttcattgcag CD 101 gtCggttatt tgttagcaca ggtttggctt acgatgtgtt tggaagccct CD 151 cggccgaatg aatatttcac ggagagccga caagaggttc ctttaattac CD 201 cggtcgtttc aattcactgg aacaagttga tgaattcact agatcctttt CD 251 ag FT EDITED CDNA CD 1 atgtctggga atacgggaga gcgccctttc gccgacatca ttaccagtat CD 51 tcgatatTgg gtgattcata gcatcactat accctcctTg ttcattgcag CD 101 gtTggttatt tgttagcaca ggtttggctt acgatgtgtt tggaagccct CD 151 cggccgaatg aatatttcac ggagagccga caagaggttc ctttaattac CD 201 cggtcgtttc aattcactgg aacaagttga tgaattcact agatcctttt CD 251 ag SQ SEQUENCE 84 AA; MSGNTGERPF ADIITSIRYW VIHSITIPSL FIAGWLFVST GLAYDVFGSP RPNEYFTESR QEVPLITGRF NSLEQVDEFT RSF* // ID AB303860_1 STANDARD; PRT; 41 AA. AC AB303860; DT Tue Jul 21 07:00:13 2009 DE Beta vulgaris subsp. maritima mitochondrial DNA, region4, atp6 gene OS mitochondrion Beta vulgaris subsp. maritima OC Beta vulgaris subsp. maritima RN [1] RL Genetics 177 (3), 1703-1712 (2007) RL PUBMED 17720920 FT C-terminal not determined FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF93948.1 FT PROTEIN_NAME : F0F1-ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 770 - 890 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 121 NT; CD 1 aCgattacgc ccaacagccc acttgagcaa ttttccattc tcccattgat CD 51 tcctatgaaa ataggaaact tgtatttctc attcacaaat ccatctttgt CD 101 ttatgctgct aactctcagt t FT EDITED CDNA CD 1 aTgattacgc ccaacagccc acttgagcaa ttttccattc tcccattgat CD 51 tcctatgaaa ataggaaact tgtatttctc attcacaaat ccatctttgt CD 101 ttatgctgct aactctcagt t SQ SEQUENCE 41 AA; MITPNSPLEQ FSILPLIPMK IGNLYFSFTN PSLFMLLTLS X // ID AB367138_2 STANDARD; PRT; 32 AA. AC AB367138; DT Tue Jul 21 07:00:14 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : petL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50143.1 FT PROTEIN_NAME : cytochrome b6/f complex subunit VI FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1896 - 1991 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 21 S(tCa) -> L(tTa) FT EDITING : 32 Q(Cag) -> *(Tag) FT CODON_START : 1 CL CDNALEN 96 NT; CD 1 aCgcttacta caatcagcta tttcgcattt ctatttgctg cttcaatttc CD 51 agctttagtt tCatttattg gcttaaacaa aatacaactt attCag FT EDITED CDNA CD 1 aTgcttacta caatcagcta tttcgcattt ctatttgctg cttcaatttc CD 51 agctttagtt tTatttattg gcttaaacaa aatacaactt attTag SQ SEQUENCE 32 AA; MLTTISYFAF LFAASISALV LFIGLNKIQL I* // ID AB367138_3 STANDARD; PRT; 38 AA. AC AB367138; DT Tue Jul 21 07:00:14 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : petG FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50144.1 FT PROTEIN_NAME : cytochrome b6/f complex subunit V FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2117 - 2230 FT DIRECTIONS : positive FT EDITING : 11 S(tCg) -> L(tTg) FT EDITING : 38 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 114 NT; CD 1 atggttgaag ctttgctgtc tggaattgtg tCggggttga ttccaataac CD 51 tctagctgga ttattcgtaa ctgcctattt gcaatatcgg cgtggcgatc CD 101 aattagatct tCga FT EDITED CDNA CD 1 atggttgaag ctttgctgtc tggaattgtg tTggggttga ttccaataac CD 51 tctagctgga ttattcgtaa ctgcctattt gcaatatcgg cgtggcgatc CD 101 aattagatct tTga SQ SEQUENCE 38 AA; MVEALLSGIV LGLIPITLAG LFVTAYLQYR RGDQLDL* // ID AB367138_5 STANDARD; PRT; 66 AA. AC AB367138; DT Tue Jul 21 07:00:14 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : rpl33 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50146.1 FT PROTEIN_NAME : ribosomal protein L33 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3746 - 3943 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 60 H(caC) -> H(caT) FT CODON_START : 1 CL CDNALEN 198 NT; CD 1 aCggctaaga atagagatgt aagagtaacc attactttgg aatgtactag CD 51 ttgtgctcaa aatggtgaaa aaataaaatt aggtgtttct agatatacta CD 101 ctaaaaaaaa tcgtcgtaat acacccactc gattggaatt gaagaaattt CD 151 tgtccttatt gtaataagca tactattcaC aaagaaataa aaaaataa FT EDITED CDNA CD 1 aTggctaaga atagagatgt aagagtaacc attactttgg aatgtactag CD 51 ttgtgctcaa aatggtgaaa aaataaaatt aggtgtttct agatatacta CD 101 ctaaaaaaaa tcgtcgtaat acacccactc gattggaatt gaagaaattt CD 151 tgtccttatt gtaataagca tactattcaT aaagaaataa aaaaataa SQ SEQUENCE 66 AA; MAKNRDVRVT ITLECTSCAQ NGEKIKLGVS RYTTKKNRRN TPTRLELKKF CPYCNKHTIH KEIKK* // ID AB367138_6 STANDARD; PRT; 76 AA. AC AB367138; DT Tue Jul 21 07:00:14 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : rps18 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50147.1 FT PROTEIN_NAME : ribosomal protein S18 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3974 - 4201 FT DIRECTIONS : positive FT EDITING : 67 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 228 NT; CD 1 atgaacaaat ccaagcgatc ttctcgtaga cgtttgccac ccatcagatc CD 51 gggagatatt ttggattata aaaatataaa tttacttcgc agatttatta CD 101 gcgaacaggg aaaaattcta tctagacgaa tgaatagatt aacctcgaaa CD 151 caacaacgct taatgactat tgctattaaa cgagctcggg ttttagcttC CD 201 attacctttt cttaataacg aaaattaa FT EDITED CDNA CD 1 atgaacaaat ccaagcgatc ttctcgtaga cgtttgccac ccatcagatc CD 51 gggagatatt ttggattata aaaatataaa tttacttcgc agatttatta CD 101 gcgaacaggg aaaaattcta tctagacgaa tgaatagatt aacctcgaaa CD 151 caacaacgct taatgactat tgctattaaa cgagctcggg ttttagcttT CD 201 attacctttt cttaataacg aaaattaa SQ SEQUENCE 76 AA; MNKSKRSSRR RLPPIRSGDI LDYKNINLLR RFISEQGKIL SRRMNRLTSK QQRLMTIAIK RARVLALLPF LNNEN* // ID AB367138_8 STANDARD; PRT; 205 AA. AC AB367138; DT Tue Jul 21 07:00:14 2009 DE Takakia lepidozioides chloroplast DNA, partial sequence. OS chloroplast Takakia lepidozioides OC Takakia lepidozioides RN [1] RL Hikobia 14, 171-175 (2004) RL PUBMED 16960353 FT Full length CDS FT GENE : clpP FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAG50149.1 FT PROTEIN_NAME : ATP-dependent Clp protease proteolytic subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 24/2 FT INTRON 122/0 FT EDITING : 20 R(Cgg) -> W(Tgg) FT EDITING : 27 L(ctC) -> L(ctT) FT EDITING : 28 H(Cat) -> Y(Tat) FT EDITING : 35 P(cCa) -> L(cTa) FT EDITING : 45 N(aaC) -> N(aaT) FT EDITING : 47 P(cCc) -> L(cTc) FT EDITING : 88 A(gCa) -> V(gTa) FT EDITING : 106 T(aCc) -> I(aTc) FT EDITING : 107 S(tCa) -> L(tTa) FT EDITING : 142 T(aCg) -> M(aTg) FT EDITING : 195 T(aCa) -> I(aTa) FT EDITING : 199 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 615 NT; CD 1 atgcccattg gtgttccaaa agtgcctttt aggctccccg gagaagaaga CD 51 tgctgttCgg atcgacgtat acaatcgact CCatcgagaa aggttactct CD 101 ttcCaggcca acacgtagat gacgaaatcg cgaaCcaacC cattggtatt CD 151 atgatgtacc tgaatggaga agatgaaagt aaagatatgt atttatatat CD 201 taactctccc ggtggagcag tattagcagg aatatctgtt tatgatgcta CD 251 tgcaatttgt agCaccggat gtacacacaa tttgcatggg attagctgct CD 301 tcaatgggat ctttcaCctC aactggaggg gaaattacta aacgtatagc CD 351 gctaccccac gctagggtaa tgatccatca acctgctagt tcctactacg CD 401 atggacaagc gggagaatgt attaCggaag cagaagaagt attaaaactt CD 451 cgcgactgca ttaccaaggt ctatgtacaa aggacaggca agccattatg CD 501 gatcatttcc gaagatatgg aaagagatgt tttcatgtca gcagaagaag CD 551 caaaagttta tggcattgtt gatttcgtag ctaCagaaac tgcttCaaat CD 601 tctccaacga attaa FT EDITED CDNA CD 1 atgcccattg gtgttccaaa agtgcctttt aggctccccg gagaagaaga CD 51 tgctgttTgg atcgacgtat acaatcgact TTatcgagaa aggttactct CD 101 ttcTaggcca acacgtagat gacgaaatcg cgaaTcaacT cattggtatt CD 151 atgatgtacc tgaatggaga agatgaaagt aaagatatgt atttatatat CD 201 taactctccc ggtggagcag tattagcagg aatatctgtt tatgatgcta CD 251 tgcaatttgt agTaccggat gtacacacaa tttgcatggg attagctgct CD 301 tcaatgggat ctttcaTctT aactggaggg gaaattacta aacgtatagc CD 351 gctaccccac gctagggtaa tgatccatca acctgctagt tcctactacg CD 401 atggacaagc gggagaatgt attaTggaag cagaagaagt attaaaactt CD 451 cgcgactgca ttaccaaggt ctatgtacaa aggacaggca agccattatg CD 501 gatcatttcc gaagatatgg aaagagatgt tttcatgtca gcagaagaag CD 551 caaaagttta tggcattgtt gatttcgtag ctaTagaaac tgcttTaaat CD 601 tctccaacga attaa SQ SEQUENCE 205 AA; MPIGVPKVPF RLPGEEDAVW IDVYNRLYRE RLLFLGQHVD DEIANQLIGI MMYLNGEDES KDMYLYINSP GGAVLAGISV YDAMQFVVPD VHTICMGLAA SMGSFILTGG EITKRIALPH ARVMIHQPAS SYYDGQAGEC IMEAEEVLKL RDCITKVYVQ RTGKPLWIIS EDMERDVFMS AEEAKVYGIV DFVAIETALN SPTN* // ID AM600641_1 STANDARD; PRT; 88 AA. AC AM600641; DT Tue Jul 21 07:01:36 2009 DE Asplenium nidus mitochondrial genes atp9, nad1 (partial), nad4L, OS mitochondrion Asplenium nidus (bird's-nest fern) OC Asplenium nidus RN [1] RL Unpublished FT N-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAM82798.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 9 - 270 FT DIRECTIONS : positive FT EDITING : 55 L(tTa) -> S(tCa) FT EDITING : 87 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 262 NT; CD 1 tcctagtctg tgtacaccgc ctctcccggg aggttggcca cccattttag CD 51 atcttcccag tttccgggga accccaggct caatctggtt tggcataaag CD 101 gttattttat ttccgtttgt atatatatgg gtttgcgcag catttcctcg CD 151 atatcgttat gatTaaccaa cgagacctgg acggaaagtc ttcccgcctt CD 201 tatcattagc tcgggtagtg tttgtatttg gcgttctagt agcctttgac CD 251 cggctacccC aa FT EDITED CDNA CD 1 tcctagtctg tgtacaccgc ctctcccggg aggttggcca cccattttag CD 51 atcttcccag tttccgggga accccaggct caatctggtt tggcataaag CD 101 gttattttat ttccgtttgt atatatatgg gtttgcgcag catttcctcg CD 151 atatcgttat gatCaaccaa cgagacctgg acggaaagtc ttcccgcctt CD 201 tatcattagc tcgggtagtg tttgtatttg gcgttctagt agcctttgac CD 251 cggctacccT aa SQ SEQUENCE 88 AA; S*SVYTASPG RLATHFRSSQ FPGNPRLNLV WHKGYFISVC IYMGLRSISS ISL*STNETW TESLPAFIIS SGSVCIWRSS SL*PATLX // ID AM600641_2 STANDARD; PRT; 101 AA. AC AM600641; DT Tue Jul 21 07:01:36 2009 DE Asplenium nidus mitochondrial genes atp9, nad1 (partial), nad4L, OS mitochondrion Asplenium nidus (bird's-nest fern) OC Asplenium nidus RN [1] RL Unpublished FT Full length CDS FT GENE : nad4L FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAM82799.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 10057 - 10359 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 4 V(gtC) -> V(gtT) FT EDITING : 14 S(tCt) -> F(tTt) FT EDITING : 16 S(tCa) -> L(tTa) FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 29 T(aCt) -> I(aTt) FT EDITING : 32 P(cCg) -> L(cTg) FT EDITING : 33 T(aCg) -> M(aTg) FT EDITING : 34 L(CTa) -> S(TCa) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 39 P(cCa) -> L(cTa) FT EDITING : 47 P(cCg) -> L(cTg) FT EDITING : 53 S(tCg) -> L(tTg) FT EDITING : 59 *(Taa) -> Q(Caa) FT EDITING : 61 L(Ctc) -> F(Ttc) FT EDITING : 63 S(tCa) -> L(tTa) FT EDITING : 70 V(gTt) -> A(gCt) FT EDITING : 85 *(Tga) -> R(Cga) FT EDITING : 95 P(cCt) -> L(cTt) FT EDITING : 101 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatctgg tCaaatattt gacattttcc atgattctct CtctttCagg CD 51 tattCgggga attctcttga atagaagaaa tattaCtatt atgcCgaCgC CD 101 TaattgagtC aatgcCattg gctgttaatt tgaactttcC ggtattttct CD 151 gtctattCgg atgatatgat gggtTaatta CtcgcctCac tagtgttaac CD 201 ggtggcagTt gcggaatccg caattgggct ggccattctg gtggtaactt CD 251 tcTgaattcg cgggaccatt gccgtggaat tccCtaattg catgaagggt CD 301 Cga FT EDITED CDNA CD 1 aTggatctgg tTaaatattt gacattttcc atgattctct TtctttTagg CD 51 tattTgggga attctcttga atagaagaaa tattaTtatt atgcTgaTgT CD 101 CaattgagtT aatgcTattg gctgttaatt tgaactttcT ggtattttct CD 151 gtctattTgg atgatatgat gggtCaatta TtcgcctTac tagtgttaac CD 201 ggtggcagCt gcggaatccg caattgggct ggccattctg gtggtaactt CD 251 tcCgaattcg cgggaccatt gccgtggaat tccTtaattg catgaagggt CD 301 Tga SQ SEQUENCE 101 AA; MDLVKYLTFS MILFLLGIWG ILLNRRNIII MLMSIELMLL AVNLNFLVFS VYLDDMMGQL FALLVLTVAA AESAIGLAIL VVTFRIRGTI AVEFLNCMKG * // ID AM600641_3 STANDARD; PRT; 75 AA. AC AM600641; DT Tue Jul 21 07:01:36 2009 DE Asplenium nidus mitochondrial genes atp9, nad1 (partial), nad4L, OS mitochondrion Asplenium nidus (bird's-nest fern) OC Asplenium nidus RN [1] RL Unpublished FT Full length CDS FT GENE : atp9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAM82800.1 FT PROTEIN_NAME : ATP synthase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 18147 - 18371 FT DIRECTIONS : positive FT EDITING : 2 L(Cta) -> L(Tta) FT EDITING : 37 *(Tga) -> R(Cga) FT EDITING : 44 *(Taa) -> Q(Caa) FT EDITING : 49 V(gTt) -> A(gCt) FT EDITING : 50 T(aCt) -> I(aTt) FT EDITING : 51 S(tCa) -> L(tTa) FT EDITING : 62 S(tCt) -> F(tTt) FT EDITING : 65 T(aCg) -> M(aTg) FT EDITING : 66 T(aCg) -> M(aTg) FT EDITING : 69 S(tCa) -> L(tTa) FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgCtagaag gtgcaaaatt gattggagca ggagcggcta ccatagcctt CD 51 agcaggagca gcagtaggta ttggaaacgt atttagttct ttgataagct CD 101 ctgtggcgTg aaatccatca ttagctaaaT aattattcgg ttatgTtaCt CD 151 tCaggctttg ccttaacgga agctattgcc ctgtCtgctt taaCgaCggc CD 201 cttctCaatt ttattcgtat ttCga FT EDITED CDNA CD 1 atgTtagaag gtgcaaaatt gattggagca ggagcggcta ccatagcctt CD 51 agcaggagca gcagtaggta ttggaaacgt atttagttct ttgataagct CD 101 ctgtggcgCg aaatccatca ttagctaaaC aattattcgg ttatgCtaTt CD 151 tTaggctttg ccttaacgga agctattgcc ctgtTtgctt taaTgaTggc CD 201 cttctTaatt ttattcgtat ttTga SQ SEQUENCE 75 AA; MLEGAKLIGA GAATIALAGA AVGIGNVFSS LISSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI LFVF* // ID AP005672_41 STANDARD; PRT; 101 AA. AC AP005672; DT Tue Jul 21 07:02:08 2009 DE Physcomitrella patens subsp. patens chloroplast DNA, complete OS chloroplast Physcomitrella patens subsp. patens OC Physcomitrella patens subsp. patens RN [1] RL . RL PUBMED 12084583 FT Full length CDS FT GENE : rps14 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC85054.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 40431 - 40733 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggcaaaaa aaagtcttat tgaaagagaa aaaaaaagac aaaaattaga CD 51 aaaaaaatat caagattttc gtcactctat aaaaaaaaaa attaaggaaa CD 101 cttcatcctt agatgaaaaa tgggaatttc aaaaacaatt acaagcttta CD 151 ccacgtaata gcgcacctac aagacttcat cgtcgttgtt ttttaaccgg CD 201 aagacctaga gcaaattatc gtgattttgg cttatctagg catgtattac CD 251 gagaaatggc tcatgcatgt tttttacctg gagtaactaa atctagttgg CD 301 taa FT EDITED CDNA CD 1 aTggcaaaaa aaagtcttat tgaaagagaa aaaaaaagac aaaaattaga CD 51 aaaaaaatat caagattttc gtcactctat aaaaaaaaaa attaaggaaa CD 101 cttcatcctt agatgaaaaa tgggaatttc aaaaacaatt acaagcttta CD 151 ccacgtaata gcgcacctac aagacttcat cgtcgttgtt ttttaaccgg CD 201 aagacctaga gcaaattatc gtgattttgg cttatctagg catgtattac CD 251 gagaaatggc tcatgcatgt tttttacctg gagtaactaa atctagttgg CD 301 taa SQ SEQUENCE 101 AA; MAKKSLIERE KKRQKLEKKY QDFRHSIKKK IKETSSLDEK WEFQKQLQAL PRNSAPTRLH RRCFLTGRPR ANYRDFGLSR HVLREMAHAC FLPGVTKSSW * // ID AP006444_4 STANDARD; PRT; 395 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : nad7 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98848.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 7 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 48/2 FT INTRON 71/2 FT INTRON 227/1 FT INTRON 308/2 FT EDITING : 71 D(gaC) -> D(gaT) FT EDITING : 82 H(Cat) -> Y(Tat) FT EDITING : 84 S(tCa) -> L(tTa) FT EDITING : 106 R(Cgt) -> C(Tgt) FT EDITING : 112 S(tCa) -> L(tTa) FT EDITING : 115 S(tCa) -> L(tTa) FT EDITING : 193 S(tCa) -> L(tTa) FT EDITING : 227 P(Cca) -> S(Tca) FT EDITING : 233 S(tCg) -> L(tTg) FT EDITING : 242 H(Cat) -> Y(Tat) FT EDITING : 245 S(tCg) -> L(tTg) FT EDITING : 247 P(CCt) -> F(TTt) FT EDITING : 257 R(Cgc) -> C(Tgc) FT EDITING : 309 S(tCa) -> L(tTa) FT EDITING : 321 S(tcC) -> S(tcT) FT EDITING : 350 P(ccC) -> P(ccT) FT EDITING : 353 R(Cgt) -> C(Tgt) FT EDITING : 363 S(tCa) -> L(tTa) FT EDITING : 368 S(tCt) -> F(tTt) FT EDITING : 375 P(cCa) -> L(cTa) FT EDITING : 379 V(gtC) -> V(gtT) FT CODON_START : 1 CL CDNALEN 1185 NT; CD 1 atgacgacta ggaaaaggca aatcaaaaat tttacttcga attttggacc CD 51 tcaacatcct gctgctcatg gtgtttcacg attagtattg gaaatgaacg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggatcact ccatagaggg CD 151 actgagaaat taatagagta caaaacttat cttcaagctt taccttattc CD 201 tgatcgttca gaCtatgttt ctatgatggc ccaagaacac gctCattctt CD 251 Cagctgtaga gaaacttttg aattgcgagg taccattacg agctcaatat CD 301 atacgagtgt tattcCgtga aataactcga atttCaaatc attCacttgc CD 351 tttaactact catgctatgg atgtgggagc attaactccg ttcctgtggg CD 401 cttttgagga gcgggagaaa ttgttggaat tctatgaaag agtctcggga CD 451 gccaggatgc atgccagttt catacgacca ggtggagtgg cacaagatct CD 501 gcctcttggc ttatgtcgag atattgattc cttcacacaa caatttgctt CD 551 ctcgtatcga tgaattagaa gagatgtCaa ccggcaaccg tatctggaaa CD 601 caacgattag tggatattgg tactgtcact gcacagcaag caaaggattg CD 651 gggattcagt ggtgtaatgt taagaggtCc aggggtatgc tgggattCgc CD 701 gaagagcagc accttacgat gttCatgacc aatCggatCC tgacgtacca CD 751 gtaggtacca gaggagatCg ctatgatcgt tactgtatcc gtatcgaaga CD 801 gatgcgacaa agtcttcgga tcattgtgca atgtcttaat caaatgccta CD 851 gcggcatgat caaagccgat gatcgtaagc tatgtcctcc atcacgatgt CD 901 cgaatgaaac tatccatgga atcctCaatt caccatttcg aactttatac CD 951 agaaggtttt tcCgtaccag cttcttctac ctataccgca gttgaagcac CD 1001 ctaaaggaga atttggtgtc tttctggtca gtaatggaag caatcgtccC CD 1051 taccgtCgta aaataagagc acccggcttt gcccattCac aaggactcga CD 1101 ttCtatgtcc aaacatcaca tgcCagcaga tgtggtCacc atcataggta CD 1151 ctcaagatat tgtgtttgga gaggtggata gatag FT EDITED CDNA CD 1 atgacgacta ggaaaaggca aatcaaaaat tttacttcga attttggacc CD 51 tcaacatcct gctgctcatg gtgtttcacg attagtattg gaaatgaacg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggatcact ccatagaggg CD 151 actgagaaat taatagagta caaaacttat cttcaagctt taccttattc CD 201 tgatcgttca gaTtatgttt ctatgatggc ccaagaacac gctTattctt CD 251 Tagctgtaga gaaacttttg aattgcgagg taccattacg agctcaatat CD 301 atacgagtgt tattcTgtga aataactcga atttTaaatc attTacttgc CD 351 tttaactact catgctatgg atgtgggagc attaactccg ttcctgtggg CD 401 cttttgagga gcgggagaaa ttgttggaat tctatgaaag agtctcggga CD 451 gccaggatgc atgccagttt catacgacca ggtggagtgg cacaagatct CD 501 gcctcttggc ttatgtcgag atattgattc cttcacacaa caatttgctt CD 551 ctcgtatcga tgaattagaa gagatgtTaa ccggcaaccg tatctggaaa CD 601 caacgattag tggatattgg tactgtcact gcacagcaag caaaggattg CD 651 gggattcagt ggtgtaatgt taagaggtTc aggggtatgc tgggattTgc CD 701 gaagagcagc accttacgat gttTatgacc aatTggatTT tgacgtacca CD 751 gtaggtacca gaggagatTg ctatgatcgt tactgtatcc gtatcgaaga CD 801 gatgcgacaa agtcttcgga tcattgtgca atgtcttaat caaatgccta CD 851 gcggcatgat caaagccgat gatcgtaagc tatgtcctcc atcacgatgt CD 901 cgaatgaaac tatccatgga atcctTaatt caccatttcg aactttatac CD 951 agaaggtttt tcTgtaccag cttcttctac ctataccgca gttgaagcac CD 1001 ctaaaggaga atttggtgtc tttctggtca gtaatggaag caatcgtccT CD 1051 taccgtTgta aaataagagc acccggcttt gcccattTac aaggactcga CD 1101 ttTtatgtcc aaacatcaca tgcTagcaga tgtggtTacc atcataggta CD 1151 ctcaagatat tgtgtttgga gaggtggata gatag SQ SEQUENCE 395 AA; MTTRKRQIKN FTSNFGPQHP AAHGVSRLVL EMNGEVVERA EPHIGSLHRG TEKLIEYKTY LQALPYSDRS DYVSMMAQEH AYSLAVEKLL NCEVPLRAQY IRVLFCEITR ILNHLLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMLTGNRIWK QRLVDIGTVT AQQAKDWGFS GVMLRGSGVC WDLRRAAPYD VYDQLDFDVP VGTRGDCYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC RMKLSMESLI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRCKIRAPGF AHLQGLDFMS KHHMLADVVT IIGTQDIVFG EVDR* // ID AP006444_8 STANDARD; PRT; 159 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : orfB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98852.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 11287 - 11763 FT DIRECTIONS : negative FT EDITING : 101 I(atC) -> I(atT) FT EDITING : 130 S(tCa) -> L(tTa) FT EDITING : 136 I(atC) -> I(atT) FT CODON_START : 1 CL CDNALEN 477 NT; CD 1 atgcctcaac tggataaatt cacttatttt tcacaattct tctggttatg CD 51 ccttttcttc tttactttct atattttcat atgcaatgat ggagatggag CD 101 tacttgggat cagcagaatt ctaaaactac ggaaccaact gctttcacac CD 151 cgggggaaga ccatccagag caaggacccc aacagtttgg aagatctctt CD 201 gagaaaaggt tttagcactg gtgtatccta tatgtatgct agtttattcg CD 251 aagtatccca atggtgtaag gccgtcgact tattgggaaa aaggaggaaa CD 301 atCactttga tctcttgttt cggagaaata agtggctcac gaggaatgga CD 351 aagaaacata ttatataata tatcgaagtc ctctccttCa aatactggaa CD 401 ggtggatCac ttgtaggaat tgtaggaatg acataatgct aatccatgtt CD 451 gtacatggcc aaggaagcat aaaatga FT EDITED CDNA CD 1 atgcctcaac tggataaatt cacttatttt tcacaattct tctggttatg CD 51 ccttttcttc tttactttct atattttcat atgcaatgat ggagatggag CD 101 tacttgggat cagcagaatt ctaaaactac ggaaccaact gctttcacac CD 151 cgggggaaga ccatccagag caaggacccc aacagtttgg aagatctctt CD 201 gagaaaaggt tttagcactg gtgtatccta tatgtatgct agtttattcg CD 251 aagtatccca atggtgtaag gccgtcgact tattgggaaa aaggaggaaa CD 301 atTactttga tctcttgttt cggagaaata agtggctcac gaggaatgga CD 351 aagaaacata ttatataata tatcgaagtc ctctccttTa aatactggaa CD 401 ggtggatTac ttgtaggaat tgtaggaatg acataatgct aatccatgtt CD 451 gtacatggcc aaggaagcat aaaatga SQ SEQUENCE 159 AA; MPQLDKFTYF SQFFWLCLFF FTFYIFICND GDGVLGISRI LKLRNQLLSH RGKTIQSKDP NSLEDLLRKG FSTGVSYMYA SLFEVSQWCK AVDLLGKRRK ITLISCFGEI SGSRGMERNI LYNISKSSPL NTGRWITCRN CRNDIMLIHV VHGQGSIK* // ID AP006444_18 STANDARD; PRT; 191 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : nad9 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98862.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 27364 - 27936 FT DIRECTIONS : negative FT EDITING : 5 S(tCc) -> F(tTc) FT EDITING : 31 S(tCt) -> F(tTt) FT EDITING : 56 S(tCg) -> L(tTg) FT EDITING : 64 H(Cat) -> Y(Tat) FT EDITING : 100 P(Ccg) -> S(Tcg) FT EDITING : 110 R(Cgg) -> W(Tgg) FT EDITING : 133 S(tCa) -> L(tTa) FT EDITING : 147 L(Ctt) -> F(Ttt) FT CODON_START : 1 CL CDNALEN 573 NT; CD 1 atggataacc aatCcatttt caaatatagt tgggagactt tacccaagaa CD 51 atgggtcaaa aaaatggaaa gatcggaaca tgggaataga tCtgatacca CD 101 atacggacta cctatttcaa ttgttgtgct ttctcaaatt gcatacctat CD 151 acaagggttc aagtttCgat cgatatttgc ggagttgatC atccctcccg CD 201 aaaacgaaga tttgaagtgg tctataattt actgagtact cggtataact CD 251 cacgcattcg tgtacaaacc agtgcagacg aagtaacacg aatatctCcg CD 301 gtagtaagtc tatttccatc agccggcCgg tgggagcgag aagtttggga CD 351 tatgtttggt gtttctttca tcaatcatcc ggatctacgc cgtatatCaa CD 401 cagattatgg tttcgagggt catccattac gaaaagacCt tcctctgagt CD 451 ggatatgtgg aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 acccattgag atgacccaag aatttcgcta tttcgatttt gctagtcctt CD 551 gggaacagcg tagcgacgga taa FT EDITED CDNA CD 1 atggataacc aatTcatttt caaatatagt tgggagactt tacccaagaa CD 51 atgggtcaaa aaaatggaaa gatcggaaca tgggaataga tTtgatacca CD 101 atacggacta cctatttcaa ttgttgtgct ttctcaaatt gcatacctat CD 151 acaagggttc aagtttTgat cgatatttgc ggagttgatT atccctcccg CD 201 aaaacgaaga tttgaagtgg tctataattt actgagtact cggtataact CD 251 cacgcattcg tgtacaaacc agtgcagacg aagtaacacg aatatctTcg CD 301 gtagtaagtc tatttccatc agccggcTgg tgggagcgag aagtttggga CD 351 tatgtttggt gtttctttca tcaatcatcc ggatctacgc cgtatatTaa CD 401 cagattatgg tttcgagggt catccattac gaaaagacTt tcctctgagt CD 451 ggatatgtgg aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 acccattgag atgacccaag aatttcgcta tttcgatttt gctagtcctt CD 551 gggaacagcg tagcgacgga taa SQ SEQUENCE 191 AA; MDNQFIFKYS WETLPKKWVK KMERSEHGNR FDTNTDYLFQ LLCFLKLHTY TRVQVLIDIC GVDYPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISS VVSLFPSAGW WEREVWDMFG VSFINHPDLR RILTDYGFEG HPLRKDFPLS GYVEVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG * // ID AP006444_19 STANDARD; PRT; 212 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT N-terminal not determined FT GENE : ccmFN2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98863.1 FT PROTEIN_NAME : cytochrome c biogenesis ccmF FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 31701 - 32336 FT DIRECTIONS : positive FT EDITING : 30 S(tCg) -> L(tTg) FT EDITING : 39 N(aaC) -> N(aaT) FT EDITING : 67 P(cCa) -> L(cTa) FT EDITING : 78 R(Cgg) -> W(Tgg) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 95 R(Cgg) -> W(Tgg) FT EDITING : 101 R(Cgt) -> C(Tgt) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 123 P(cCa) -> L(cTa) FT EDITING : 139 P(Ccc) -> S(Tcc) FT CODON_START : 1 CL CDNALEN 636 NT; CD 1 tctttgctct gggcaggagc gctagtggac acggggaggg agcaggcgaa CD 51 gcgtgtcgtt cgtaatggaa agaaagagac cactacttCg cctctttgtt CD 101 ggaccgccgg cgcgaaCaca gtggtctctg atcaggacca ggaaccaatt CD 151 cgaatttgga tcttgacatg ttggtggttt ttaaccgtag gcatcttgcC CD 201 aggaagttgg tgggcttatc atgaattagg tCggggtggc tggtggtttC CD 251 gggatcccgt agaaaatgct tcttttatgc ctCgggtatt agccacagct CD 301 Cgtattcatt ctgtaatttt accccttctt cattcttgga cctCgtttct CD 351 taatattgtg acttttcCat gctgtgtctt aggaaccttt tcaatacggt CD 401 ccggattgct agctCccgtt catagttttg ctacagatga tacacgagga CD 451 atctttttat ggtggttctt ccttctaatg accggcatat ctatgattct CD 501 tttctaccag atgaagcagc aggcatcggt ccgtagaacg tataaaaaag CD 551 aaatggttgt ggcgcgaagt actcttgtgc atctacgtca ctcggctcgc CD 601 gcgcaacccc gccccgttat gttatggaag aattga FT EDITED CDNA CD 1 tctttgctct gggcaggagc gctagtggac acggggaggg agcaggcgaa CD 51 gcgtgtcgtt cgtaatggaa agaaagagac cactacttTg cctctttgtt CD 101 ggaccgccgg cgcgaaTaca gtggtctctg atcaggacca ggaaccaatt CD 151 cgaatttgga tcttgacatg ttggtggttt ttaaccgtag gcatcttgcT CD 201 aggaagttgg tgggcttatc atgaattagg tTggggtggc tggtggtttT CD 251 gggatcccgt agaaaatgct tcttttatgc ctTgggtatt agccacagct CD 301 Tgtattcatt ctgtaatttt accccttctt cattcttgga cctTgtttct CD 351 taatattgtg acttttcTat gctgtgtctt aggaaccttt tcaatacggt CD 401 ccggattgct agctTccgtt catagttttg ctacagatga tacacgagga CD 451 atctttttat ggtggttctt ccttctaatg accggcatat ctatgattct CD 501 tttctaccag atgaagcagc aggcatcggt ccgtagaacg tataaaaaag CD 551 aaatggttgt ggcgcgaagt actcttgtgc atctacgtca ctcggctcgc CD 601 gcgcaacccc gccccgttat gttatggaag aattga SQ SEQUENCE 212 AA; SLLWAGALVD TGREQAKRVV RNGKKETTTL PLCWTAGANT VVSDQDQEPI RIWILTCWWF LTVGILLGSW WAYHELGWGG WWFWDPVENA SFMPWVLATA CIHSVILPLL HSWTLFLNIV TFLCCVLGTF SIRSGLLASV HSFATDDTRG IFLWWFFLLM TGISMILFYQ MKQQASVRRT YKKEMVVARS TLVHLRHSAR AQPRPVMLWK N* // ID AP006444_20 STANDARD; PRT; 262 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98864.1 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 36626 - 37411 FT DIRECTIONS : negative FT EDITING : 35 P(Cca) -> S(Tca) FT CODON_START : 1 CL CDNALEN 786 NT; CD 1 atgaatcaaa tagggctggt ggcgcagtcc ccacttgacc aatttgagat CD 51 tgtcccattg attcctatga atatcggaaa cttctatttc tcattcacaa CD 101 atCcatcttt gttcatgctg ctaactctga gttttttcct acttctgatt CD 151 cattttatta ctaaaaaggg aggaggaaac ttagtcccaa atgcttggca CD 201 atccttggta gagcttcttt atgatttcgt gctgaacctg gtaaaggaac CD 251 aaataggtgg tctttccgga aatgtgaaac aaatgttttt cccttgcatc CD 301 ttggtcactt ttcttttttt gttattttgt aatcttcagg gtatgatacc CD 351 ttatagcttc acagtgacaa gtcattttct cattactttg gctctctcat CD 401 tttctatttt tattggcatt actatagtgg gatttcaaag acatgggctt CD 451 cattttttca gctttttatt acccgcagga gtcccactgc cgttagcacc CD 501 ttttttagta ctccttgagc taatttctta ttgttttcgc gcattaagct CD 551 taggaatacg tttatttgct aatatgatgg ccggtcatag tttagtaaag CD 601 attttaagtg ggttcgcttg gactatgcta tgtatgaatg agattttcta CD 651 ttttataggg gctcttggtc ctttatttat agttcttgca ttaaccggtc CD 701 tggaattagg tgtagctata ttacaagctt atgtttttac gatcttaatc CD 751 tgtatttact tgaatgatgc tataaatctc cattaa FT EDITED CDNA CD 1 atgaatcaaa tagggctggt ggcgcagtcc ccacttgacc aatttgagat CD 51 tgtcccattg attcctatga atatcggaaa cttctatttc tcattcacaa CD 101 atTcatcttt gttcatgctg ctaactctga gttttttcct acttctgatt CD 151 cattttatta ctaaaaaggg aggaggaaac ttagtcccaa atgcttggca CD 201 atccttggta gagcttcttt atgatttcgt gctgaacctg gtaaaggaac CD 251 aaataggtgg tctttccgga aatgtgaaac aaatgttttt cccttgcatc CD 301 ttggtcactt ttcttttttt gttattttgt aatcttcagg gtatgatacc CD 351 ttatagcttc acagtgacaa gtcattttct cattactttg gctctctcat CD 401 tttctatttt tattggcatt actatagtgg gatttcaaag acatgggctt CD 451 cattttttca gctttttatt acccgcagga gtcccactgc cgttagcacc CD 501 ttttttagta ctccttgagc taatttctta ttgttttcgc gcattaagct CD 551 taggaatacg tttatttgct aatatgatgg ccggtcatag tttagtaaag CD 601 attttaagtg ggttcgcttg gactatgcta tgtatgaatg agattttcta CD 651 ttttataggg gctcttggtc ctttatttat agttcttgca ttaaccggtc CD 701 tggaattagg tgtagctata ttacaagctt atgtttttac gatcttaatc CD 751 tgtatttact tgaatgatgc tataaatctc cattaa SQ SEQUENCE 262 AA; MNQIGLVAQS PLDQFEIVPL IPMNIGNFYF SFTNSSLFML LTLSFFLLLI HFITKKGGGN LVPNAWQSLV ELLYDFVLNL VKEQIGGLSG NVKQMFFPCI LVTFLFLLFC NLQGMIPYSF TVTSHFLITL ALSFSIFIGI TIVGFQRHGL HFFSFLLPAG VPLPLAPFLV LLELISYCFR ALSLGIRLFA NMMAGHSLVK ILSGFAWTML CMNEIFYFIG ALGPLFIVLA LTGLELGVAI LQAYVFTILI CIYLNDAINL H* // ID AP006444_21 STANDARD; PRT; 193 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : orf25 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98865.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 41309 - 41887 FT DIRECTIONS : negative FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 46 I(atC) -> I(atT) FT EDITING : 72 S(tCg) -> L(tTg) FT EDITING : 83 P(cCt) -> L(cTt) FT EDITING : 84 P(CCg) -> L(TTg) FT EDITING : 132 S(tCa) -> L(tTa) FT EDITING : 139 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 579 NT; CD 1 atgagattga gttcgacgaa tatggatgct agaaagatgt tatttgctgc CD 51 tattctatct atttgtgcat taagttcgaa gaagatctCa atctataatg CD 101 aagaaatgat agtagctctt tgttttatag gctttatCat attcagtcgt CD 151 aagagtttag gtacgacttt caaagcgact ctcgacggga gaatccaggc CD 201 tattcaggaa gaatCgcagc aattccccaa tcctaacgaa gtagttcCtC CD 251 Cggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgt CD 301 ggcaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgtt aagtCagcaa CD 401 cacttacaaa tgccaCttct tcccgtcgca tccgttttca ggacgatcta CD 451 gtcacaaagt tttacacctt agtgggtaat caatttgcct actcttctat CD 501 ctcgaaagca gaaagagtag aattcattcg agagagcttg gtggtcttaa CD 551 gaatggttcg gggggggggt ttctcttaa FT EDITED CDNA CD 1 atgagattga gttcgacgaa tatggatgct agaaagatgt tatttgctgc CD 51 tattctatct atttgtgcat taagttcgaa gaagatctTa atctataatg CD 101 aagaaatgat agtagctctt tgttttatag gctttatTat attcagtcgt CD 151 aagagtttag gtacgacttt caaagcgact ctcgacggga gaatccaggc CD 201 tattcaggaa gaatTgcagc aattccccaa tcctaacgaa gtagttcTtT CD 251 Tggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgt CD 301 ggcaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgtt aagtTagcaa CD 401 cacttacaaa tgccaTttct tcccgtcgca tccgttttca ggacgatcta CD 451 gtcacaaagt tttacacctt agtgggtaat caatttgcct actcttctat CD 501 ctcgaaagca gaaagagtag aattcattcg agagagcttg gtggtcttaa CD 551 gaatggttcg gggggggggt ttctcttaa SQ SEQUENCE 193 AA; MRLSSTNMDA RKMLFAAILS ICALSSKKIL IYNEEMIVAL CFIGFIIFSR KSLGTTFKAT LDGRIQAIQE ELQQFPNPNE VVLLESNEQQ RLLRISLRIC GTVVESLPMA RCAPKCEKTV QALLCRNLNV KLATLTNAIS SRRIRFQDDL VTKFYTLVGN QFAYSSISKA ERVEFIRESL VVLRMVRGGG FS* // ID AP006444_22 STANDARD; PRT; 101 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : nad4L FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98866.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 42122 - 42424 FT DIRECTIONS : negative FT EDITING : 3 P(cCt) -> L(cTt) FT EDITING : 14 S(tCt) -> F(tTt) FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 29 P(cCt) -> L(cTt) FT EDITING : 32 S(tCa) -> L(tTa) FT EDITING : 34 P(Cca) -> S(Tca) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 44 S(tCg) -> L(tTg) FT EDITING : 53 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atggatcCta tcaaatattt cacattttct atgattattt Ctattttagg CD 51 tattCgggga atcctcctta atagacgaaa tattcCtatt atgtCaatgC CD 101 caattgaatC aatgttatta gctgtgaatt Cgaacttttt ggtattttcc CD 151 gtttcttCgg atgatatgat gggtcaagta tttgcttcat tggttccaac CD 201 ggtggcagct gcggaatccg ctattgggtt agccattttc gttataactt CD 251 tccgagtccg agggactatt gctgtagaat ttattaatag cattcaaggt CD 301 taa FT EDITED CDNA CD 1 atggatcTta tcaaatattt cacattttct atgattattt Ttattttagg CD 51 tattTgggga atcctcctta atagacgaaa tattcTtatt atgtTaatgT CD 101 caattgaatT aatgttatta gctgtgaatt Tgaacttttt ggtattttcc CD 151 gtttcttTgg atgatatgat gggtcaagta tttgcttcat tggttccaac CD 201 ggtggcagct gcggaatccg ctattgggtt agccattttc gttataactt CD 251 tccgagtccg agggactatt gctgtagaat ttattaatag cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDLIKYFTFS MIIFILGIWG ILLNRRNILI MLMSIELMLL AVNLNFLVFS VSLDDMMGQV FASLVPTVAA AESAIGLAIF VITFRVRGTI AVEFINSIQG * // ID AP006444_26 STANDARD; PRT; 149 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : rps7 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98870.1 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 49925 - 50371 FT DIRECTIONS : negative FT EDITING : 111 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 447 NT; CD 1 atggggggct tggatggtga gcaaaaacta ttgatcaaga agttggtcaa CD 51 ttttcgcatg aaagaaggta aaagaacgag agttcgtgct attgtttatc CD 101 aaacttttca tcgcccagct cgaactgaac gcgatgtaat caaacttatg CD 151 gttgacgccg tagagaatat aaagcccata tgcgaagtag caaaagtagg CD 201 agtagcgggt actatttatg atgtccctgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggatccttg aagcagcttt caaacgacgt CD 301 ataagctaca ggataagctt agagaaatgt tCatttgctg agatactgga CD 351 tgcttaccaa aagaggggaa gtgcacgtag gaaaagggag aatcttcatg CD 401 gactggcttc caccaatcga agtttcgcgc atttcagatg gtggtaa FT EDITED CDNA CD 1 atggggggct tggatggtga gcaaaaacta ttgatcaaga agttggtcaa CD 51 ttttcgcatg aaagaaggta aaagaacgag agttcgtgct attgtttatc CD 101 aaacttttca tcgcccagct cgaactgaac gcgatgtaat caaacttatg CD 151 gttgacgccg tagagaatat aaagcccata tgcgaagtag caaaagtagg CD 201 agtagcgggt actatttatg atgtccctgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggatccttg aagcagcttt caaacgacgt CD 301 ataagctaca ggataagctt agagaaatgt tTatttgctg agatactgga CD 351 tgcttaccaa aagaggggaa gtgcacgtag gaaaagggag aatcttcatg CD 401 gactggcttc caccaatcga agtttcgcgc atttcagatg gtggtaa SQ SEQUENCE 149 AA; MGGLDGEQKL LIKKLVNFRM KEGKRTRVRA IVYQTFHRPA RTERDVIKLM VDAVENIKPI CEVAKVGVAG TIYDVPGIVA RDRQQTLAIR WILEAAFKRR ISYRISLEKC LFAEILDAYQ KRGSARRKRE NLHGLASTNR SFAHFRWW* // ID AP006444_31 STANDARD; PRT; 678 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT N-terminal not determined FT GENE : matR FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98875.1 FT PROTEIN_NAME : maturase-related protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 59777 - 61810 FT DIRECTIONS : positive FT EDITING : 129 P(cCa) -> L(cTa) FT EDITING : 158 S(tCg) -> L(tTg) FT EDITING : 582 S(tCc) -> F(tTc) FT EDITING : 589 P(cCt) -> L(cTt) FT EDITING : 596 R(Cgc) -> C(Tgc) FT EDITING : 608 H(Cac) -> Y(Tac) FT EDITING : 631 P(cCc) -> L(cTc) FT EDITING : 637 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 2034 NT; CD 1 agaaagaaag aagggttgaa gtttagaccg ctcacagtag ttctacctat CD 51 agaaaagatc atgaaagagg cgatcagaat ggtactcgaa tccatttacg CD 101 atcccgagtt tccagacaca tcgcatttcc gctcgggtca aggctgccac CD 151 tcggtcctaa gacggatcaa agaagagtgg ggaatctctc gctggttttt CD 201 agaattcgac atcaggaagt gttttcacac catcgatcga catcgactca CD 251 tccaaatttt gaaggaagag atcgacgatc ccaagttctt ttactccatt CD 301 cataaagtct tttccgccgg acgactcgta ggagttgaga ggggccctta CD 351 ctccgtccca cacagtgtac tactatcggc cctacCaggc aacatctacc CD 401 tacacaagct cgatcaggag atagggagga tccgacagaa gtatgaaatt CD 451 ccgattgttc agagagtcag atCggttcta ttaaggacag gtcgtcgtat CD 501 tgatgaccaa gaaaaccctg gagaagaagc aagcttcaac gctccccaag CD 551 acaacagagc catcattgtg gggagcgtta agagcatgca acgcaaagcg CD 601 gcctttcatt cccttgtttc gtcgtggcac acccccccca caagcaccct CD 651 ccggctcagg ggggaccaga aaaggccttt cgttttcccc ccttcgtcgg CD 701 cccttgccgt cttccttaac aagccctcga gccttctttg cgccgccttc CD 751 ctcatagaag ccgccgggtt gaccccgaag gccgaattct atggtggaga CD 801 acgctgtaat aataattggg ccatgagaga ccttcttaag tattgcaaaa CD 851 gaaagggcct gctgatagag ctgggcgggg aggcgatact agttatcagg CD 901 tcagagagag gcctggcccg taagcaggcc cccttaaaaa cccattactt CD 951 aataaggatt tgttacgcgc gatatgccga cgacttacta ctgggaatcg CD 1001 tgggtgccgt agagcttctc atagaaatac aaaaacgtat cgcccatttc CD 1051 ctacaatccg gcctgaacct ttgggtaggc tccgcaggat caacaacaat CD 1101 agctgcacgg agtacggtag aattcctcgg tacggtcatt cgggaagtcc CD 1151 ctccgaggac gactcccata caatttttgc gagagctgga aaagcgtcta CD 1201 cgggtaaagc accgtatcca tataactgct tgccacctac gctccgccat CD 1251 ccattcaaag tttaggaatc taggtgatag tatcccgatc aaacagctga CD 1301 cgaaggggat gagcaaaaca gggagtctac aggacggggt tcaactagcg CD 1351 gagactcttg gaacagctgg agtcagaagt ccccaagtta gcgtattatg CD 1401 ggggaccgtc aagcacatcc ggcaaggcgt tcctcggggg atctcgttct CD 1451 tgcatagctc aggtcggagc aacgcgtcat cggacgttca acaggtagtc CD 1501 tcacgatcgg gcactcatgc ccgtaagttg tcattgtata ctcccccggg CD 1551 tcggaaggcg gcgggggagg gaggaggaca ctgggcggga tctatcagca CD 1601 gcgaattccc cgtaaagata gaggcaccta taaaaaagat actccgaagg CD 1651 cttcgggatc gaggtatcat tagccgaaga agaccctggc caatccacgt CD 1701 ggcctgcttg acgaacgtca gcgacgaaga catcgtaaat tggtCcgcgg CD 1751 gcatcgcgat aagtcCtctg tcctactaca ggtgcCgcga caacctttac CD 1801 caagtccgaa cgattgtcga cCaccagatt cgctggtctg caatattcac CD 1851 cctagcccac aagcacaaat cctcggcgcg gaatataatc cCcaagtact CD 1901 ccaaagactC aaatattgta aatcaagaag gtggtaagat ccttgcagag CD 1951 ttccccaaca gcatagagct tgggaagctc ggacccggtc aagacctgaa CD 2001 caagaaggaa cactcaacta ctagtctagt ctag FT EDITED CDNA CD 1 agaaagaaag aagggttgaa gtttagaccg ctcacagtag ttctacctat CD 51 agaaaagatc atgaaagagg cgatcagaat ggtactcgaa tccatttacg CD 101 atcccgagtt tccagacaca tcgcatttcc gctcgggtca aggctgccac CD 151 tcggtcctaa gacggatcaa agaagagtgg ggaatctctc gctggttttt CD 201 agaattcgac atcaggaagt gttttcacac catcgatcga catcgactca CD 251 tccaaatttt gaaggaagag atcgacgatc ccaagttctt ttactccatt CD 301 cataaagtct tttccgccgg acgactcgta ggagttgaga ggggccctta CD 351 ctccgtccca cacagtgtac tactatcggc cctacTaggc aacatctacc CD 401 tacacaagct cgatcaggag atagggagga tccgacagaa gtatgaaatt CD 451 ccgattgttc agagagtcag atTggttcta ttaaggacag gtcgtcgtat CD 501 tgatgaccaa gaaaaccctg gagaagaagc aagcttcaac gctccccaag CD 551 acaacagagc catcattgtg gggagcgtta agagcatgca acgcaaagcg CD 601 gcctttcatt cccttgtttc gtcgtggcac acccccccca caagcaccct CD 651 ccggctcagg ggggaccaga aaaggccttt cgttttcccc ccttcgtcgg CD 701 cccttgccgt cttccttaac aagccctcga gccttctttg cgccgccttc CD 751 ctcatagaag ccgccgggtt gaccccgaag gccgaattct atggtggaga CD 801 acgctgtaat aataattggg ccatgagaga ccttcttaag tattgcaaaa CD 851 gaaagggcct gctgatagag ctgggcgggg aggcgatact agttatcagg CD 901 tcagagagag gcctggcccg taagcaggcc cccttaaaaa cccattactt CD 951 aataaggatt tgttacgcgc gatatgccga cgacttacta ctgggaatcg CD 1001 tgggtgccgt agagcttctc atagaaatac aaaaacgtat cgcccatttc CD 1051 ctacaatccg gcctgaacct ttgggtaggc tccgcaggat caacaacaat CD 1101 agctgcacgg agtacggtag aattcctcgg tacggtcatt cgggaagtcc CD 1151 ctccgaggac gactcccata caatttttgc gagagctgga aaagcgtcta CD 1201 cgggtaaagc accgtatcca tataactgct tgccacctac gctccgccat CD 1251 ccattcaaag tttaggaatc taggtgatag tatcccgatc aaacagctga CD 1301 cgaaggggat gagcaaaaca gggagtctac aggacggggt tcaactagcg CD 1351 gagactcttg gaacagctgg agtcagaagt ccccaagtta gcgtattatg CD 1401 ggggaccgtc aagcacatcc ggcaaggcgt tcctcggggg atctcgttct CD 1451 tgcatagctc aggtcggagc aacgcgtcat cggacgttca acaggtagtc CD 1501 tcacgatcgg gcactcatgc ccgtaagttg tcattgtata ctcccccggg CD 1551 tcggaaggcg gcgggggagg gaggaggaca ctgggcggga tctatcagca CD 1601 gcgaattccc cgtaaagata gaggcaccta taaaaaagat actccgaagg CD 1651 cttcgggatc gaggtatcat tagccgaaga agaccctggc caatccacgt CD 1701 ggcctgcttg acgaacgtca gcgacgaaga catcgtaaat tggtTcgcgg CD 1751 gcatcgcgat aagtcTtctg tcctactaca ggtgcTgcga caacctttac CD 1801 caagtccgaa cgattgtcga cTaccagatt cgctggtctg caatattcac CD 1851 cctagcccac aagcacaaat cctcggcgcg gaatataatc cTcaagtact CD 1901 ccaaagactT aaatattgta aatcaagaag gtggtaagat ccttgcagag CD 1951 ttccccaaca gcatagagct tgggaagctc ggacccggtc aagacctgaa CD 2001 caagaaggaa cactcaacta ctagtctagt ctag SQ SEQUENCE 678 AA; RKKEGLKFRP LTVVLPIEKI MKEAIRMVLE SIYDPEFPDT SHFRSGQGCH SVLRRIKEEW GISRWFLEFD IRKCFHTIDR HRLIQILKEE IDDPKFFYSI HKVFSAGRLV GVERGPYSVP HSVLLSALLG NIYLHKLDQE IGRIRQKYEI PIVQRVRLVL LRTGRRIDDQ ENPGEEASFN APQDNRAIIV GSVKSMQRKA AFHSLVSSWH TPPTSTLRLR GDQKRPFVFP PSSALAVFLN KPSSLLCAAF LIEAAGLTPK AEFYGGERCN NNWAMRDLLK YCKRKGLLIE LGGEAILVIR SERGLARKQA PLKTHYLIRI CYARYADDLL LGIVGAVELL IEIQKRIAHF LQSGLNLWVG SAGSTTIAAR STVEFLGTVI REVPPRTTPI QFLRELEKRL RVKHRIHITA CHLRSAIHSK FRNLGDSIPI KQLTKGMSKT GSLQDGVQLA ETLGTAGVRS PQVSVLWGTV KHIRQGVPRG ISFLHSSGRS NASSDVQQVV SRSGTHARKL SLYTPPGRKA AGEGGGHWAG SISSEFPVKI EAPIKKILRR LRDRGIISRR RPWPIHVACL TNVSDEDIVN WFAGIAISLL SYYRCCDNLY QVRTIVDYQI RWSAIFTLAH KHKSSARNII LKYSKDLNIV NQEGGKILAE FPNSIELGKL GPGQDLNKKE HSTTSLV* // ID AP006444_38 STANDARD; PRT; 443 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : ccmFC FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98883.1 FT PROTEIN_NAME : cytochrome c biogenesis ccmF FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 261/0 FT EDITING : 17 P(cCt) -> L(cTt) FT EDITING : 35 P(Ccc) -> S(Tcc) FT EDITING : 49 P(cCt) -> L(cTt) FT EDITING : 52 S(tCa) -> L(tTa) FT EDITING : 54 P(Cct) -> S(Tct) FT EDITING : 112 R(Cgt) -> C(Tgt) FT EDITING : 136 R(Cgt) -> C(Tgt) FT EDITING : 139 L(Ctc) -> F(Ttc) FT EDITING : 297 S(tCt) -> F(tTt) FT EDITING : 391 S(tCg) -> L(tTg) FT EDITING : 416 R(Cgg) -> W(Tgg) FT EDITING : 443 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1329 NT; CD 1 atggtccaac tacataactt tttctttttt attcttttta tggtcgtgcC CD 51 ttgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttCccacggg tgcccctttt tccaatggta ctataattcc tattcCtatc CD 151 tcttCattcC ctcttttggt ctatctacat tccaggaaaa tcatacgctc CD 201 catggacgga gcaaaaagtg gagtcttggt cagagcaagt cgccctattc CD 251 tattaccaga cataattggg agaagctcat ccgaaactag agctagaaag CD 301 gccttatttt ttttcgttcc cgttcttcat ttcCgtcttc tcgaatccaa CD 351 gggggacttc tcatatttag aatctttctg cggtgtgctc tgtttactat CD 401 tctttCgtac tttcCtcttt ttagcacgcg ataggtcagc gaagcgtgag CD 451 cgggcgcgga gaaggaaagg ccaaacactt cggccgaacg ggaatgagca CD 501 acgacgaaat gacaagatga ggtgctccgg gcacccccat ttagatttag CD 551 aaagaagggt cgaaggtttt gggcctctag ctttccccgt cccccctgag CD 601 ttgggtggtg cttgtgtggg gggcgtgcca ccagaaatcg ggcttgaagc CD 651 tctcgcctta ccaaggagcc gacagctgat ggctatggct gttggtcacg CD 701 actactacca aaaggttcca atgaagatga atatttcaca tggaggagtg CD 751 tgcatctgta tgttgggtgt tcttctgtcg aacacaaaga agatacagtt CD 801 cactcaacga ttgcctttgg gttccgaact ccatatgggg aaggagcgtt CD 851 gttgtttgcg aggtctcgat catttacatg gacccacttC tcattccatt CD 901 tgtgggaatt tgatgatcta taaaccgtcc ctaacgaacg atcggctcat CD 951 gtttgagcat gatgaatcac ttcatgccga cctcttgcta ataaactttc CD 1001 cggcctcata taagaatgga aaacttgagc attttctgca ttggtggatg CD 1051 aagaatcgca aacataataa tttttggtta accatgttcc cagaaaaaag CD 1101 atactttcga gaaaggacga gcacggctga agtggctata catacaaatc CD 1151 tatttacgga tctatatgct tCgattggaa ctggaagttc cagaacagga CD 1201 ggttggtata ccaccataat gaaactgcct tttatttttt ttattCggat CD 1251 aggatttatg ttggcttcgt tgggaggctt gcctagtttg ttacgtcagc CD 1301 tccaaaagga taagttgcgt tggaatCga FT EDITED CDNA CD 1 atggtccaac tacataactt tttctttttt attcttttta tggtcgtgcT CD 51 ttgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttTccacggg tgcccctttt tccaatggta ctataattcc tattcTtatc CD 151 tcttTattcT ctcttttggt ctatctacat tccaggaaaa tcatacgctc CD 201 catggacgga gcaaaaagtg gagtcttggt cagagcaagt cgccctattc CD 251 tattaccaga cataattggg agaagctcat ccgaaactag agctagaaag CD 301 gccttatttt ttttcgttcc cgttcttcat ttcTgtcttc tcgaatccaa CD 351 gggggacttc tcatatttag aatctttctg cggtgtgctc tgtttactat CD 401 tctttTgtac tttcTtcttt ttagcacgcg ataggtcagc gaagcgtgag CD 451 cgggcgcgga gaaggaaagg ccaaacactt cggccgaacg ggaatgagca CD 501 acgacgaaat gacaagatga ggtgctccgg gcacccccat ttagatttag CD 551 aaagaagggt cgaaggtttt gggcctctag ctttccccgt cccccctgag CD 601 ttgggtggtg cttgtgtggg gggcgtgcca ccagaaatcg ggcttgaagc CD 651 tctcgcctta ccaaggagcc gacagctgat ggctatggct gttggtcacg CD 701 actactacca aaaggttcca atgaagatga atatttcaca tggaggagtg CD 751 tgcatctgta tgttgggtgt tcttctgtcg aacacaaaga agatacagtt CD 801 cactcaacga ttgcctttgg gttccgaact ccatatgggg aaggagcgtt CD 851 gttgtttgcg aggtctcgat catttacatg gacccacttT tcattccatt CD 901 tgtgggaatt tgatgatcta taaaccgtcc ctaacgaacg atcggctcat CD 951 gtttgagcat gatgaatcac ttcatgccga cctcttgcta ataaactttc CD 1001 cggcctcata taagaatgga aaacttgagc attttctgca ttggtggatg CD 1051 aagaatcgca aacataataa tttttggtta accatgttcc cagaaaaaag CD 1101 atactttcga gaaaggacga gcacggctga agtggctata catacaaatc CD 1151 tatttacgga tctatatgct tTgattggaa ctggaagttc cagaacagga CD 1201 ggttggtata ccaccataat gaaactgcct tttatttttt ttattTggat CD 1251 aggatttatg ttggcttcgt tgggaggctt gcctagtttg ttacgtcagc CD 1301 tccaaaagga taagttgcgt tggaatTga SQ SEQUENCE 443 AA; MVQLHNFFFF ILFMVVLCGT AAPVLLKWFV SRDVSTGAPF SNGTIIPILI SLFSLLVYLH SRKIIRSMDG AKSGVLVRAS RPILLPDIIG RSSSETRARK ALFFFVPVLH FCLLESKGDF SYLESFCGVL CLLFFCTFFF LARDRSAKRE RARRRKGQTL RPNGNEQRRN DKMRCSGHPH LDLERRVEGF GPLAFPVPPE LGGACVGGVP PEIGLEALAL PRSRQLMAMA VGHDYYQKVP MKMNISHGGV CICMLGVLLS NTKKIQFTQR LPLGSELHMG KERCCLRGLD HLHGPTFHSI CGNLMIYKPS LTNDRLMFEH DESLHADLLL INFPASYKNG KLEHFLHWWM KNRKHNNFWL TMFPEKRYFR ERTSTAEVAI HTNLFTDLYA LIGTGSSRTG GWYTTIMKLP FIFFIWIGFM LASLGGLPSL LRQLQKDKLR WN* // ID AP006444_40 STANDARD; PRT; 266 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : cox3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98885.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 96486 - 97283 FT DIRECTIONS : positive FT EDITING : 38 P(Cca) -> S(Tca) FT EDITING : 82 P(cCt) -> L(cTt) FT EDITING : 86 S(tCt) -> F(tTt) FT EDITING : 104 S(tCt) -> F(tTt) FT EDITING : 105 S(tCt) -> F(tTt) FT EDITING : 138 P(cCt) -> L(cTt) FT EDITING : 141 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 798 NT; CD 1 atgattgaat ctcagaggca ttcttatcat ttggtagatc caagtccatg CD 51 gcctatttcg ggttcactcg gagctttggc aaccaccgta ggaggtgtga CD 101 tgtacatgca cCcatttcaa gggggtgcaa gacttctaag tttgggcctc CD 151 atatttctcc tatataccat gttcgtatgg tggcgcgatg ttctacgtga CD 201 atccacgttg gaaggacatc ataccaaagt cgtacaatta ggacCtcgat CD 251 atggttCtat tctgttcatc gtatcggagg ttatgttctt ttttgctttt CD 301 ttttgggctt CttCtcattc ttctttggca cctgcggtag agatcggagg CD 351 tatttggccc ccaaaaggga ttggggtttt agatccttgg gaaatccctt CD 401 ttcttaatac ccCtattctc cCttcatccg gagctgccgt aacttgggct CD 451 catcatgcta tactcgcggg gaaggaaaaa cgagcagttt atgctttagt CD 501 agctaccgtt ttactggctc tagtatttac tggctttcaa ggaatggaat CD 551 attatcaagc acccttcact atttcggata gtatttatgg ttctaccttt CD 601 ttcttagcaa caggctttca tggttttcat gtgattatag gtactctttt CD 651 cttgattata tgtggtattc ggcaatatct tggtcatctg acgaaggagc CD 701 atcacgttgg ctttgaagca gctgcatggt actggcattt tgtagacgtg CD 751 gtttggttat tcctatttgt ctctatctat tggtggggag gtatatga FT EDITED CDNA CD 1 atgattgaat ctcagaggca ttcttatcat ttggtagatc caagtccatg CD 51 gcctatttcg ggttcactcg gagctttggc aaccaccgta ggaggtgtga CD 101 tgtacatgca cTcatttcaa gggggtgcaa gacttctaag tttgggcctc CD 151 atatttctcc tatataccat gttcgtatgg tggcgcgatg ttctacgtga CD 201 atccacgttg gaaggacatc ataccaaagt cgtacaatta ggacTtcgat CD 251 atggttTtat tctgttcatc gtatcggagg ttatgttctt ttttgctttt CD 301 ttttgggctt TttTtcattc ttctttggca cctgcggtag agatcggagg CD 351 tatttggccc ccaaaaggga ttggggtttt agatccttgg gaaatccctt CD 401 ttcttaatac ccTtattctc cTttcatccg gagctgccgt aacttgggct CD 451 catcatgcta tactcgcggg gaaggaaaaa cgagcagttt atgctttagt CD 501 agctaccgtt ttactggctc tagtatttac tggctttcaa ggaatggaat CD 551 attatcaagc acccttcact atttcggata gtatttatgg ttctaccttt CD 601 ttcttagcaa caggctttca tggttttcat gtgattatag gtactctttt CD 651 cttgattata tgtggtattc ggcaatatct tggtcatctg acgaaggagc CD 701 atcacgttgg ctttgaagca gctgcatggt actggcattt tgtagacgtg CD 751 gtttggttat tcctatttgt ctctatctat tggtggggag gtatatga SQ SEQUENCE 266 AA; MIESQRHSYH LVDPSPWPIS GSLGALATTV GGVMYMHSFQ GGARLLSLGL IFLLYTMFVW WRDVLRESTL EGHHTKVVQL GLRYGFILFI VSEVMFFFAF FWAFFHSSLA PAVEIGGIWP PKGIGVLDPW EIPFLNTLIL LSSGAAVTWA HHAILAGKEK RAVYALVATV LLALVFTGFQ GMEYYQAPFT ISDSIYGSTF FLATGFHGFH VIIGTLFLII CGIRQYLGHL TKEHHVGFEA AAWYWHFVDV VWLFLFVSIY WWGGI* // ID AP006444_47 STANDARD; PRT; 382 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : ccmFN1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98892.1 FT PROTEIN_NAME : cytochrome c biogenesis ccmF FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 106649 - 107794 FT DIRECTIONS : negative FT EDITING : 13 P(cCg) -> L(cTg) FT EDITING : 33 P(cCt) -> L(cTt) FT EDITING : 46 S(tCg) -> L(tTg) FT EDITING : 51 P(Cct) -> S(Tct) FT EDITING : 86 R(Cgg) -> W(Tgg) FT EDITING : 88 P(cCa) -> L(cTa) FT EDITING : 95 L(Ctt) -> F(Ttt) FT EDITING : 124 F(ttC) -> F(ttT) FT EDITING : 236 P(CCt) -> F(TTt) FT EDITING : 259 S(tCa) -> L(tTa) FT EDITING : 263 P(cCa) -> L(cTa) FT EDITING : 268 S(tCa) -> L(tTa) FT EDITING : 318 R(Cgc) -> C(Tgc) FT EDITING : 326 R(Cgt) -> C(Tgt) FT CODON_START : 1 CL CDNALEN 1146 NT; CD 1 atgtcaatat atgaattctt tcattattcg ttatttcCgg gtcttttcgt CD 51 tgcattcact tacaacaaga aacaaccacc agcgtttggt gcagcacCtg CD 101 cattttggtg cattcttctt tctttccttg gtctttCgtt ctgtcatatt CD 151 Cctaataact tatccaatta caacgtatta accgctaatg cacctttctt CD 201 ttatcaaatc tcaggaacat ggtctaatca tgagggtagt attttattat CD 251 ggtgtCggat ccCaaatttt tatggatttt ttCtttgtta ccggggtcga CD 301 ccccaaagcc ataatgtctt aaaacaagga ggccataggg aaagtctttt CD 351 tttttttttt ttctcgaact tCgtgaagaa ctcaatttta tctctccctc CD 401 gttacgaaca agaaagtggt ttgaaaaatc agttgtacac tcccttcgtt CD 451 ctacgaaccc ttgttgattc tgaacttcgt ttgcgaagga accggacttt CD 501 tgacggacca gccctttttt atgcgccgct tgatcctgaa aggaaaatga CD 551 gctttgctcc tctggacgct tggcgctccc gtggttcgcg agaaggaaaa CD 601 aggactcatc ctttgttgca tctggcacga gatgataaag agagagcttc CD 651 gtctatcgat gaacagcgaa ttgacggagc tcttggcatt gctttgtttt CD 701 tctctCCttt cctatcagcg agttccgatc cttttgttcg aaatttcttt CD 751 gtttgtaccg aaccgcttgc agaatCaaat cctgttcCac aagatcctat CD 801 atCagctata catcctcctt gcatttatgc cggggacgtc gccagtgcgg CD 851 agggctttgg cttatgtaga tcaaaaatga tgaatgggat tgtggcactc CD 901 cactcgccgc caatgcggaa ggatgccgcc gaaaagaatg gaacgctgct CD 951 tCgctctgct ggatgcgtcg gatccCgtat aacaagcgag ctttttaccc CD 1001 tcaaattcaa acatgtgggc gcaaaatgct atcctgctct attgttacgt CD 1051 agcaatagaa gcccgctcat gctgcttcgg cggcgctttt tcgccttctc CD 1101 ttcgttctgg acaggagcga gaagccactc gactaaaagg tactga FT EDITED CDNA CD 1 atgtcaatat atgaattctt tcattattcg ttatttcTgg gtcttttcgt CD 51 tgcattcact tacaacaaga aacaaccacc agcgtttggt gcagcacTtg CD 101 cattttggtg cattcttctt tctttccttg gtctttTgtt ctgtcatatt CD 151 Tctaataact tatccaatta caacgtatta accgctaatg cacctttctt CD 201 ttatcaaatc tcaggaacat ggtctaatca tgagggtagt attttattat CD 251 ggtgtTggat ccTaaatttt tatggatttt ttTtttgtta ccggggtcga CD 301 ccccaaagcc ataatgtctt aaaacaagga ggccataggg aaagtctttt CD 351 tttttttttt ttctcgaact tTgtgaagaa ctcaatttta tctctccctc CD 401 gttacgaaca agaaagtggt ttgaaaaatc agttgtacac tcccttcgtt CD 451 ctacgaaccc ttgttgattc tgaacttcgt ttgcgaagga accggacttt CD 501 tgacggacca gccctttttt atgcgccgct tgatcctgaa aggaaaatga CD 551 gctttgctcc tctggacgct tggcgctccc gtggttcgcg agaaggaaaa CD 601 aggactcatc ctttgttgca tctggcacga gatgataaag agagagcttc CD 651 gtctatcgat gaacagcgaa ttgacggagc tcttggcatt gctttgtttt CD 701 tctctTTttt cctatcagcg agttccgatc cttttgttcg aaatttcttt CD 751 gtttgtaccg aaccgcttgc agaatTaaat cctgttcTac aagatcctat CD 801 atTagctata catcctcctt gcatttatgc cggggacgtc gccagtgcgg CD 851 agggctttgg cttatgtaga tcaaaaatga tgaatgggat tgtggcactc CD 901 cactcgccgc caatgcggaa ggatgccgcc gaaaagaatg gaacgctgct CD 951 tTgctctgct ggatgcgtcg gatccTgtat aacaagcgag ctttttaccc CD 1001 tcaaattcaa acatgtgggc gcaaaatgct atcctgctct attgttacgt CD 1051 agcaatagaa gcccgctcat gctgcttcgg cggcgctttt tcgccttctc CD 1101 ttcgttctgg acaggagcga gaagccactc gactaaaagg tactga SQ SEQUENCE 382 AA; MSIYEFFHYS LFLGLFVAFT YNKKQPPAFG AALAFWCILL SFLGLLFCHI SNNLSNYNVL TANAPFFYQI SGTWSNHEGS ILLWCWILNF YGFFFCYRGR PQSHNVLKQG GHRESLFFFF FSNFVKNSIL SLPRYEQESG LKNQLYTPFV LRTLVDSELR LRRNRTFDGP ALFYAPLDPE RKMSFAPLDA WRSRGSREGK RTHPLLHLAR DDKERASSID EQRIDGALGI ALFFSFFLSA SSDPFVRNFF VCTEPLAELN PVLQDPILAI HPPCIYAGDV ASAEGFGLCR SKMMNGIVAL HSPPMRKDAA EKNGTLLCSA GCVGSCITSE LFTLKFKHVG AKCYPALLLR SNRSPLMLLR RRFFAFSSFW TGARSHSTKR Y* // ID AP006444_48 STANDARD; PRT; 75 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : atp9 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98893.1 FT PROTEIN_NAME : ATPase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 112435 - 112659 FT DIRECTIONS : positive FT EDITING : 7 S(tCa) -> L(tTa) FT EDITING : 17 S(tCa) -> L(tTa) FT EDITING : 45 S(tCa) -> L(tTa) FT EDITING : 64 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gtgcaaaatC aataggtgcc ggagctgcta caattgcttC CD 51 agcgggagct gctatcggta ttggaaacgt cttcagttct ttgatccatt CD 101 ctgtggcgcg aaatccatca ttggctaaac aatCatttgg ttatgccatt CD 151 ttgggctttg ctctaaccga agctattgca ttgtttgccc Caatgatggc CD 201 ctttttgatc ttattcgtat tctga FT EDITED CDNA CD 1 atgttagaag gtgcaaaatT aataggtgcc ggagctgcta caattgcttT CD 51 agcgggagct gctatcggta ttggaaacgt cttcagttct ttgatccatt CD 101 ctgtggcgcg aaatccatca ttggctaaac aatTatttgg ttatgccatt CD 151 ttgggctttg ctctaaccga agctattgca ttgtttgccc Taatgatggc CD 201 ctttttgatc ttattcgtat tctga SQ SEQUENCE 75 AA; MLEGAKLIGA GAATIALAGA AIGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI LFVF* // ID AP006444_50 STANDARD; PRT; 119 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : nad3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98895.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 114042 - 114398 FT DIRECTIONS : positive FT EDITING : 2 S(tCa) -> L(tTa) FT EDITING : 8 S(tCt) -> F(tTt) FT EDITING : 27 P(cCa) -> L(cTa) FT EDITING : 49 S(tCc) -> F(tTc) FT EDITING : 70 P(CCt) -> F(TTt) FT EDITING : 83 P(Cct) -> S(Tct) FT EDITING : 84 P(cCc) -> L(cTc) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 117 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 atgtCagaat ttgcaccaat ttCtatctat ttagtgatta gtctgctagt CD 51 ttctttgatc ctactcggtg ttccttttcC atttgcttcc aatagttcta CD 101 cctacccaga aaaattgtcg gcctacgaat gtggtttcga tccttCcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatcttgttt caattttatt CD 201 tttaatcCCt gatctggaag tcaccttttt ctttccttgg gcagtaCctc CD 251 Ccaacaagat tgatttgttt ggattttggt ccatgatggc ctttttattt CD 301 attttgacga ttggatttct ctatgaatgg aaaaggggtg cttCggatCg CD 351 ggagtaa FT EDITED CDNA CD 1 atgtTagaat ttgcaccaat ttTtatctat ttagtgatta gtctgctagt CD 51 ttctttgatc ctactcggtg ttccttttcT atttgcttcc aatagttcta CD 101 cctacccaga aaaattgtcg gcctacgaat gtggtttcga tccttTcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatcttgttt caattttatt CD 201 tttaatcTTt gatctggaag tcaccttttt ctttccttgg gcagtaTctc CD 251 Tcaacaagat tgatttgttt ggattttggt ccatgatggc ctttttattt CD 301 attttgacga ttggatttct ctatgaatgg aaaaggggtg cttTggatTg CD 351 ggagtaa SQ SEQUENCE 119 AA; MLEFAPIFIY LVISLLVSLI LLGVPFLFAS NSSTYPEKLS AYECGFDPFG DARSRFDIRF YLVSILFLIF DLEVTFFFPW AVSLNKIDLF GFWSMMAFLF ILTIGFLYEW KRGALDWE* // ID AP006444_51 STANDARD; PRT; 126 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : rps12 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98896.1 FT PROTEIN_NAME : ribosomal protein S12 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 114446 - 114823 FT DIRECTIONS : positive FT EDITING : 35 P(cCg) -> L(cTg) FT EDITING : 49 P(cCa) -> L(cTa) FT EDITING : 66 H(Cac) -> Y(Tac) FT EDITING : 74 S(tCg) -> L(tTg) FT EDITING : 90 S(tCg) -> L(tTg) FT EDITING : 95 S(tCC) -> F(tTT) FT CODON_START : 1 CL CDNALEN 378 NT; CD 1 atgcctacgt ttaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt tggataaatg tccccagaag ctaggagcat CD 101 gccCgcgtgt ttcaacgaga acaccgaaaa aaccgaattc cgctcCacgt CD 151 aagatagcca aagtacggtt gagcaatcga catgatatat ttgctCacat CD 201 tccgggcgaa ggtcataatt Cgcaggaaca ttcgcaggtg ttaataagag CD 251 gaggtagagt gaaagattCg ccaggtgtaa aatCCcattg tattcgagga CD 301 gtaaaggatt tgatgggaat tccgggtcga agaagaggca gatcaaaata CD 351 tggtgcagaa aaacccaaat cgatatga FT EDITED CDNA CD 1 atgcctacgt ttaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt tggataaatg tccccagaag ctaggagcat CD 101 gccTgcgtgt ttcaacgaga acaccgaaaa aaccgaattc cgctcTacgt CD 151 aagatagcca aagtacggtt gagcaatcga catgatatat ttgctTacat CD 201 tccgggcgaa ggtcataatt Tgcaggaaca ttcgcaggtg ttaataagag CD 251 gaggtagagt gaaagattTg ccaggtgtaa aatTTcattg tattcgagga CD 301 gtaaaggatt tgatgggaat tccgggtcga agaagaggca gatcaaaata CD 351 tggtgcagaa aaacccaaat cgatatga SQ SEQUENCE 126 AA; MPTFNQLIRH GREEKRRTDR TRALDKCPQK LGACLRVSTR TPKKPNSALR KIAKVRLSNR HDIFAYIPGE GHNLQEHSQV LIRGGRVKDL PGVKFHCIRG VKDLMGIPGR RRGRSKYGAE KPKSI* // ID AP006444_52 STANDARD; PRT; 207 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : ccmB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98897.1 FT PROTEIN_NAME : cytochrome c biogenesis ccmB FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 115015 - 115635 FT DIRECTIONS : positive FT EDITING : 6 L(Ctt) -> F(Ttt) FT EDITING : 10 H(Cat) -> Y(Tat) FT EDITING : 15 P(Ccc) -> S(Tcc) FT EDITING : 24 P(cCa) -> L(cTa) FT EDITING : 27 S(tCg) -> L(tTg) FT EDITING : 29 I(atC) -> I(atT) FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 46 S(tCc) -> F(tTc) FT EDITING : 50 P(CCg) -> L(TTg) FT EDITING : 52 R(Cgg) -> W(Tgg) FT EDITING : 53 I(atC) -> I(atT) FT EDITING : 54 P(Cct) -> S(Tct) FT EDITING : 55 P(cCg) -> L(cTg) FT EDITING : 58 P(Cct) -> S(Tct) FT EDITING : 60 P(cCt) -> L(cTt) FT EDITING : 61 P(Ccc) -> S(Tcc) FT EDITING : 65 P(CCt) -> F(TTt) FT EDITING : 96 R(Cgg) -> W(Tgg) FT EDITING : 102 R(Cgt) -> C(Tgt) FT EDITING : 113 S(tCg) -> L(tTg) FT EDITING : 123 R(Cgg) -> W(Tgg) FT EDITING : 127 P(CCa) -> L(TTa) FT EDITING : 142 R(Cgt) -> C(Tgt) FT EDITING : 143 S(tCg) -> L(tTg) FT EDITING : 156 S(tCg) -> L(tTg) FT EDITING : 159 P(CCa) -> L(TTa) FT EDITING : 162 S(tCa) -> L(tTa) FT EDITING : 171 S(tCt) -> F(tTt) FT EDITING : 172 R(Cgt) -> C(Tgt) FT EDITING : 184 S(tCa) -> L(tTa) FT EDITING : 185 S(tCg) -> L(tTg) FT EDITING : 189 S(tCc) -> F(tTc) FT EDITING : 190 S(tCt) -> F(tTt) FT EDITING : 192 F(ttC) -> F(ttT) FT EDITING : 199 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 621 NT; CD 1 atgagacgac tttttCttga actatatCat aaactgatct tcCcctccac CD 51 accaatcacg agtttttctc CattcctctC gtatatCgtc gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttCat gtcattCcca tttaggtCCg CD 151 attCggatCC ctcCgttgtt tCcttttcCt Cccgcacctt ttCCtcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt acttattgct CD 251 tgccaaagat cctacttcta caattggtgg gtcacCgggt tattcaaata CD 301 agtCgtgttt tctgtggttt tcccatgtta caactttCgt accaattcgg CD 351 tcgatccgga atggatCggt taaacattCC attagggagc ctggtcttga CD 401 ctcttctgtg tggtattcat tctCgttCgg ctcttggaat cacatccagc CD 451 agtggttgga acagctCgca aaatCCaacc acttCaccta ctttattgcc CD 501 cctaaccgtt tCtCgtacct ctattgaaac agaatggttt catgttcttt CD 551 CatCgattgg ttattCctCt ctgttCgtat ctctttttcc aatttCggtc CD 601 tcgattagtt tacaagatta a FT EDITED CDNA CD 1 atgagacgac tttttTttga actatatTat aaactgatct tcTcctccac CD 51 accaatcacg agtttttctc TattcctctT gtatatTgtc gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttTat gtcattTcca tttaggtTTg CD 151 attTggatTT ctcTgttgtt tTcttttcTt Tccgcacctt ttTTtcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt acttattgct CD 251 tgccaaagat cctacttcta caattggtgg gtcacTgggt tattcaaata CD 301 agtTgtgttt tctgtggttt tcccatgtta caactttTgt accaattcgg CD 351 tcgatccgga atggatTggt taaacattTT attagggagc ctggtcttga CD 401 ctcttctgtg tggtattcat tctTgttTgg ctcttggaat cacatccagc CD 451 agtggttgga acagctTgca aaatTTaacc acttTaccta ctttattgcc CD 501 cctaaccgtt tTtTgtacct ctattgaaac agaatggttt catgttcttt CD 551 TatTgattgg ttattTctTt ctgttTgtat ctctttttcc aatttTggtc CD 601 tcgattagtt tacaagatta a SQ SEQUENCE 207 AA; MRRLFFELYY KLIFSSTPIT SFSLFLLYIV VTPLMLGFEK DFLCHFHLGL IWISLLFSFL SAPFFRNEKE DGTLELYYLS TYCLPKILLL QLVGHWVIQI SCVFCGFPML QLLYQFGRSG MDWLNILLGS LVLTLLCGIH SCLALGITSS SGWNSLQNLT TLPTLLPLTV FCTSIETEWF HVLLLIGYFF LFVSLFPILV SISLQD* // ID AP006444_59 STANDARD; PRT; 508 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : atp1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98904.1 FT PROTEIN_NAME : ATPase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 135659 - 137182 FT DIRECTIONS : negative FT EDITING : 5 P(ccC) -> P(ccT) FT EDITING : 393 S(tCa) -> L(tTa) FT EDITING : 431 P(cCg) -> L(cTg) FT EDITING : 472 P(cCa) -> L(cTa) FT EDITING : 495 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1524 NT; CD 1 atggaattat ctccCagagc tgcggaacta acgaatctat tcgaaagtcg CD 51 aattaggaac ttttacgcga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacaagttt atggattgaa cgagattcaa CD 151 gctggggaaa tggttctttt tgccaacggt gtgaaaggaa tggccttgaa CD 201 tcttgagaat gagaatgtcg ggattgttgt ctttggtggt gataccgcta CD 251 taaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttccc CD 301 gcgggaaagg ctatgctagg gcgtgtggtc gacgcgatgg gagtacctat CD 351 tgatggaaga ggggctctaa gcgatcacga gcaaagacgt gtcgaagtga CD 401 aagcccctgg gattcttgaa cgtaaatcag tgcacgagcc tatgcaaaca CD 451 gggttaaaag cggtagatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttctaatc ggggaccgac aaactggaaa aacgactatt gctatcgata CD 551 ccatattaaa ccaaaagcaa ataaactcaa gggccacctc tgagagtgag CD 601 acaatgtatt gtgtctatgt agcgattgga cagaaacgct cgactgtggg CD 651 acaattaatt caaactcttg aagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctctgcaatt tttggcccca CD 751 tattccgggt gtgccatggg ggaatatttc cgcgataatg gaatgcacgc CD 801 attaataatc tatgatgatc ttagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggtgat CD 901 gttttctatt tacattcccg tctcttagaa agagcggcta aacgatcgga CD 951 ccagacaggt gcaggtagct tgaccgcctt acccgtcatt gaaacacaag CD 1001 ctggagacgt atcggcctat attcccacca atgtgatctc cattactgat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtc ggcttatctg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtatgc ggtagttCaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgcctttgc tcaatttggc tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct gacagaagta cCgaaacaac CD 1301 cacaatatgc accacttcca attgaaaaac aaatactagt catttatgca CD 1351 gctgtcaatg gattctgtga tcgaatgcca ctagacagaa tctctcaata CD 1401 tgagaaagcc attcCaaata gtgtcaaacc tgaattacta caagccctta CD 1451 aaggtggatt aactaacgaa agaaaaatgg aacCagatgc tttcttaaaa CD 1501 gaaagagctt tagctttaat ttag FT EDITED CDNA CD 1 atggaattat ctccTagagc tgcggaacta acgaatctat tcgaaagtcg CD 51 aattaggaac ttttacgcga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacaagttt atggattgaa cgagattcaa CD 151 gctggggaaa tggttctttt tgccaacggt gtgaaaggaa tggccttgaa CD 201 tcttgagaat gagaatgtcg ggattgttgt ctttggtggt gataccgcta CD 251 taaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttccc CD 301 gcgggaaagg ctatgctagg gcgtgtggtc gacgcgatgg gagtacctat CD 351 tgatggaaga ggggctctaa gcgatcacga gcaaagacgt gtcgaagtga CD 401 aagcccctgg gattcttgaa cgtaaatcag tgcacgagcc tatgcaaaca CD 451 gggttaaaag cggtagatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttctaatc ggggaccgac aaactggaaa aacgactatt gctatcgata CD 551 ccatattaaa ccaaaagcaa ataaactcaa gggccacctc tgagagtgag CD 601 acaatgtatt gtgtctatgt agcgattgga cagaaacgct cgactgtggg CD 651 acaattaatt caaactcttg aagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctctgcaatt tttggcccca CD 751 tattccgggt gtgccatggg ggaatatttc cgcgataatg gaatgcacgc CD 801 attaataatc tatgatgatc ttagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggtgat CD 901 gttttctatt tacattcccg tctcttagaa agagcggcta aacgatcgga CD 951 ccagacaggt gcaggtagct tgaccgcctt acccgtcatt gaaacacaag CD 1001 ctggagacgt atcggcctat attcccacca atgtgatctc cattactgat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtc ggcttatctg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtatgc ggtagttTaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgcctttgc tcaatttggc tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct gacagaagta cTgaaacaac CD 1301 cacaatatgc accacttcca attgaaaaac aaatactagt catttatgca CD 1351 gctgtcaatg gattctgtga tcgaatgcca ctagacagaa tctctcaata CD 1401 tgagaaagcc attcTaaata gtgtcaaacc tgaattacta caagccctta CD 1451 aaggtggatt aactaacgaa agaaaaatgg aacTagatgc tttcttaaaa CD 1501 gaaagagctt tagctttaat ttag SQ SEQUENCE 508 AA; MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGR GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GDRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSLKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV LKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA ILNSVKPELL QALKGGLTNE RKMELDAFLK ERALALI* // ID AP006444_61 STANDARD; PRT; 350 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : rpl2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98906.1 FT PROTEIN_NAME : ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 306/2 FT EDITING : 12 F(ttC) -> F(ttT) FT EDITING : 71 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1050 NT; CD 1 atgagaccag ggagagcaag agcacttaga caattCactt tgagtacagg CD 51 aaagtctgct ggtaggaatt cctcagggcg tattacggtt tttcaccgag CD 101 ggggtggctc gaagcgattg ctgcgaagaa ttgatctgaa acgaagcact CD 151 tcctctatgg gcattgtaga gagtatagaa tatgacccta atcgttcttc CD 201 tcagatcgct cCagtacgat ggatcaaggg gggctgccag aaaaaaatga CD 251 acacgatcga ggagttagct ccgccgcgca agatcctcga acctaccacg CD 301 aacaccatca gcggcctctt ttcgttctct ttcctgcccg ggaaggtgga CD 351 tcaaagaaag gtagcttgct tctctcctgg actgatggcc gcttatgtag CD 401 tggtcggcct tcctaccgga atgcctcctt tgtcttcgta taagagcgcc CD 451 tttgctagta agggcgcagg aagcacaaaa actttagtga aggacgtctt CD 501 cttctctgcc ttctcctctc caaaggccaa gagagagact gcatcccttg CD 551 ccttcgctag ctcttttggt ttcccaagga tagcggtagc tggggttcct CD 601 accgctttct tcgctccgcg aatgagacag aaagtgagag gaaaaagcac CD 651 gttctctctt tgcgaggtcc gaaagtggag aacgcatagc attctctggg CD 701 cacataggat caaaggtaaa gcagggcttt cttggcagag ttttaggcgg CD 751 caagatactt tagggcttgt tggagctgct gggcataaca aatcgaagcc CD 801 gaagacggat caaggtagct tgcctgccaa gccgataggc gaaagggcga CD 851 agcaactcaa agctctccgg ggtttgaggg cgaaggatgg agcgtgcaaa CD 901 gtcgatcgtg cacctgtcac ttatataata gccagtcatc aattagaagc CD 951 aggcaaaatg gtgatgaatt gcgattggtc caaaccttcg accagctcct CD 1001 tctcgcaatc cgcccagaat gaccatccta agcccttatt cactgtgtga FT EDITED CDNA CD 1 atgagaccag ggagagcaag agcacttaga caattTactt tgagtacagg CD 51 aaagtctgct ggtaggaatt cctcagggcg tattacggtt tttcaccgag CD 101 ggggtggctc gaagcgattg ctgcgaagaa ttgatctgaa acgaagcact CD 151 tcctctatgg gcattgtaga gagtatagaa tatgacccta atcgttcttc CD 201 tcagatcgct cTagtacgat ggatcaaggg gggctgccag aaaaaaatga CD 251 acacgatcga ggagttagct ccgccgcgca agatcctcga acctaccacg CD 301 aacaccatca gcggcctctt ttcgttctct ttcctgcccg ggaaggtgga CD 351 tcaaagaaag gtagcttgct tctctcctgg actgatggcc gcttatgtag CD 401 tggtcggcct tcctaccgga atgcctcctt tgtcttcgta taagagcgcc CD 451 tttgctagta agggcgcagg aagcacaaaa actttagtga aggacgtctt CD 501 cttctctgcc ttctcctctc caaaggccaa gagagagact gcatcccttg CD 551 ccttcgctag ctcttttggt ttcccaagga tagcggtagc tggggttcct CD 601 accgctttct tcgctccgcg aatgagacag aaagtgagag gaaaaagcac CD 651 gttctctctt tgcgaggtcc gaaagtggag aacgcatagc attctctggg CD 701 cacataggat caaaggtaaa gcagggcttt cttggcagag ttttaggcgg CD 751 caagatactt tagggcttgt tggagctgct gggcataaca aatcgaagcc CD 801 gaagacggat caaggtagct tgcctgccaa gccgataggc gaaagggcga CD 851 agcaactcaa agctctccgg ggtttgaggg cgaaggatgg agcgtgcaaa CD 901 gtcgatcgtg cacctgtcac ttatataata gccagtcatc aattagaagc CD 951 aggcaaaatg gtgatgaatt gcgattggtc caaaccttcg accagctcct CD 1001 tctcgcaatc cgcccagaat gaccatccta agcccttatt cactgtgtga SQ SEQUENCE 350 AA; MRPGRARALR QFTLSTGKSA GRNSSGRITV FHRGGGSKRL LRRIDLKRST SSMGIVESIE YDPNRSSQIA LVRWIKGGCQ KKMNTIEELA PPRKILEPTT NTISGLFSFS FLPGKVDQRK VACFSPGLMA AYVVVGLPTG MPPLSSYKSA FASKGAGSTK TLVKDVFFSA FSSPKAKRET ASLAFASSFG FPRIAVAGVP TAFFAPRMRQ KVRGKSTFSL CEVRKWRTHS ILWAHRIKGK AGLSWQSFRR QDTLGLVGAA GHNKSKPKTD QGSLPAKPIG ERAKQLKALR GLRAKDGACK VDRAPVTYII ASHQLEAGKM VMNCDWSKPS TSSFSQSAQN DHPKPLFTV* // ID AP006444_62 STANDARD; PRT; 270 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT N-terminal not determined FT GENE : orfX FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98907.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 143241 - 144050 FT DIRECTIONS : positive FT EDITING : 9 H(Cat) -> Y(Tat) FT EDITING : 12 S(tCg) -> L(tTg) FT EDITING : 25 R(Cgg) -> W(Tgg) FT EDITING : 41 P(Ccg) -> S(Tcg) FT EDITING : 46 S(tCt) -> F(tTt) FT EDITING : 47 P(cCa) -> L(cTa) FT EDITING : 50 S(tCa) -> L(tTa) FT EDITING : 113 L(Ctc) -> F(Ttc) FT EDITING : 114 H(Cat) -> Y(Tat) FT EDITING : 118 S(tCt) -> F(tTt) FT EDITING : 119 R(Cgc) -> C(Tgc) FT EDITING : 128 P(CCt) -> F(TTt) FT EDITING : 129 P(Ccc) -> S(Tcc) FT EDITING : 130 R(Cgg) -> W(Tgg) FT EDITING : 139 P(cCa) -> L(cTa) FT EDITING : 161 H(Cat) -> Y(Tat) FT EDITING : 169 S(tCg) -> L(tTg) FT EDITING : 172 P(Cca) -> S(Tca) FT EDITING : 188 P(cCa) -> L(cTa) FT EDITING : 207 P(Ccg) -> S(Tcg) FT EDITING : 209 L(Ctc) -> F(Ttc) FT EDITING : 214 S(tCc) -> F(tTc) FT EDITING : 223 I(atC) -> I(atT) FT EDITING : 226 R(Cgt) -> C(Tgt) FT EDITING : 241 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 810 NT; CD 1 attacttata tatcctatga atttCatttc gcatCggaaa cgattctagg CD 51 agaagttcga atccgttccg ttCggatatt gatcggtctt ggtttgacat CD 101 ggtttacgtg ttactggttc Ccggaagagt taatatCtcC attagcgtCa CD 151 ccctttctta ccctgccttt tgactcgtat tttgtttgta cacaattaac CD 201 ggaggccttt tcgacattta ttgcaacgtc ttcaatagca tgctcttatt CD 251 tcgtctttcc tttaataagt tatcaaattt ggtgcttttt gatccccagt CD 301 tgctatggag aacaaaggac gaaatacaat cgattcCtcC atttaagtgg CD 351 ttCtCgcttc ttcttgttcc tgttcctaac tCCtCccCgg gtcgttccca CD 401 atgtttggca ctttcCatac ttcgtgggtg caacatcaac aaattcgctc CD 451 atgatcaagt tacaacctaa gatctatgac Catattatgt taactgttcg CD 501 tatttCgttc attCcatcgg tatgctccca ggtacctgta attgtgatct CD 551 gtttgccaga acCaaggggt ctttctttgg aaaccttcac gaacaatcgt CD 601 cgttttttga tggtttttCc gcttCtcaca gctgctcttt Ccacacctcc CD 651 ggatatctgg tgccaaatCg tcgccCgttt ccttatttct ttgataatag CD 701 agttggctat ttttgtggca tCgattgtac aagttcgtga agagggctgg CD 751 acgagtggaa tgagggagag cggctcgatc gagaaaaaaa agaagagtag CD 801 ccccccctag FT EDITED CDNA CD 1 attacttata tatcctatga atttTatttc gcatTggaaa cgattctagg CD 51 agaagttcga atccgttccg ttTggatatt gatcggtctt ggtttgacat CD 101 ggtttacgtg ttactggttc Tcggaagagt taatatTtcT attagcgtTa CD 151 ccctttctta ccctgccttt tgactcgtat tttgtttgta cacaattaac CD 201 ggaggccttt tcgacattta ttgcaacgtc ttcaatagca tgctcttatt CD 251 tcgtctttcc tttaataagt tatcaaattt ggtgcttttt gatccccagt CD 301 tgctatggag aacaaaggac gaaatacaat cgattcTtcT atttaagtgg CD 351 ttTtTgcttc ttcttgttcc tgttcctaac tTTtTccTgg gtcgttccca CD 401 atgtttggca ctttcTatac ttcgtgggtg caacatcaac aaattcgctc CD 451 atgatcaagt tacaacctaa gatctatgac Tatattatgt taactgttcg CD 501 tatttTgttc attTcatcgg tatgctccca ggtacctgta attgtgatct CD 551 gtttgccaga acTaaggggt ctttctttgg aaaccttcac gaacaatcgt CD 601 cgttttttga tggtttttTc gcttTtcaca gctgctcttt Tcacacctcc CD 651 ggatatctgg tgccaaatTg tcgccTgttt ccttatttct ttgataatag CD 701 agttggctat ttttgtggca tTgattgtac aagttcgtga agagggctgg CD 751 acgagtggaa tgagggagag cggctcgatc gagaaaaaaa agaagagtag CD 801 ccccccctag SQ SEQUENCE 270 AA; ITYISYEFYF ALETILGEVR IRSVWILIGL GLTWFTCYWF SEELIFLLAL PFLTLPFDSY FVCTQLTEAF STFIATSSIA CSYFVFPLIS YQIWCFLIPS CYGEQRTKYN RFFYLSGFCF FLFLFLTFSW VVPNVWHFLY FVGATSTNSL MIKLQPKIYD YIMLTVRILF ISSVCSQVPV IVICLPELRG LSLETFTNNR RFLMVFSLFT AALFTPPDIW CQIVACFLIS LIIELAIFVA LIVQVREEGW TSGMRESGSI EKKKKSSPP* // ID AP006444_63 STANDARD; PRT; 496 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : nad4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98908.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 154/2 FT INTRON 326/1 FT INTRON 467/0 FT EDITING : 10 S(tCt) -> F(tTt) FT EDITING : 25 T(aCt) -> I(aTt) FT EDITING : 26 P(cCt) -> L(cTt) FT EDITING : 36 P(cCg) -> L(cTg) FT EDITING : 42 L(Ctg) -> L(Ttg) FT EDITING : 53 P(cCt) -> L(cTt) FT EDITING : 55 P(cCt) -> L(cTt) FT EDITING : 56 R(Cgg) -> W(Tgg) FT EDITING : 66 S(tCt) -> F(tTt) FT EDITING : 106 S(tCa) -> L(tTa) FT EDITING : 121 T(aCa) -> I(aTa) FT EDITING : 126 R(Cgt) -> C(Tgt) FT EDITING : 135 R(Cgc) -> C(Tgc) FT EDITING : 146 P(CCc) -> F(TTc) FT EDITING : 150 P(cCa) -> L(cTa) FT EDITING : 203 S(tCa) -> L(tTa) FT EDITING : 220 S(tCt) -> F(tTt) FT EDITING : 223 S(tCt) -> F(tTt) FT EDITING : 256 P(cCt) -> L(cTt) FT EDITING : 262 H(Cac) -> Y(Tac) FT EDITING : 279 S(tCt) -> F(tTt) FT EDITING : 299 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1488 NT; CD 1 atgttagaac atttctgtga atgctattCt aatctaagtg gtcttattct CD 51 gtgtcctgtg ctaggaagca ttaCtcCtct tttcattcca aattcaagaa CD 101 tacgacCgat acgattaatt ggtCtgtgtg cctctcttat tacttttttg CD 151 tattctcCtg ttcCtCggat acaattcgac tcttctacgg ccaaatCtca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc aatttttatt CD 251 tgggtataga cggtatctct ttattcttcg tgatattgac cacatttctg CD 301 atccctattt gcatttCagt gggttggtct ggtatgagaa gttatgggaa CD 351 agagtatatt aCagcatttt taattCgtga atttctaatg atcgccgtgt CD 401 tcCgcatgct ggatcttcta ctattctatg tttttCCcga aagcgtgcCa CD 451 atccctatgt tcattattat aggagtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctttatac tttacttgga tctcttttta CD 551 tgctattagc tattctgttg attcttttcc aaacaggaac caccgattta CD 601 caaatatCat taaccacaga atttagtgag cggcgccaaa tctttctatg CD 651 gattgcttCt ttcgcctCtt tcgccgtcaa agtgcctatg gtaccagttc CD 701 atatttggtt acccgaagct catgtagagg cacctacggc aggatccgtc CD 751 atcttggcag gaattcCttt aaaatttgga accCacgggt ttttaagatt CD 801 ttcaataccc atgtttcccg aagcgacact ttgttCtact cctttcattt CD 851 atactttaag cgcgattgct ataatatata cttccttgac cacttCaaga CD 901 cagatcgatc taaagaagat cattgcttac tcctcagtag cccatatgaa CD 951 tctggtgact attggtatgt ttagtccgaa catacaggga attggaggta CD 1001 gtattctacc gatgttaagt catggactgg ttccttcagc cctttttcta CD 1051 tgtgttggtg ttctatatga ccgacataag actcgacttg ttagatatta CD 1101 cggaggttta gtgagcacca tgccgaatct ctctaccatt ttcttttctt CD 1151 ttactttggc caatatgagt tcacctggta ctagcagctt tatcggggaa CD 1201 tttcccatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 agcagcgctt gggatgattt taggtgcggc ctattccctt tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacccg atttcctcca taaattctcc CD 1351 gattcaaatg gcagagaagt ttccatattt ataccttttc ttgttggact CD 1401 cgttcggatg ggtgttcacc ccaaagtgtt cccggactgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggcaaat ttcattga FT EDITED CDNA CD 1 atgttagaac atttctgtga atgctattTt aatctaagtg gtcttattct CD 51 gtgtcctgtg ctaggaagca ttaTtcTtct tttcattcca aattcaagaa CD 101 tacgacTgat acgattaatt ggtTtgtgtg cctctcttat tacttttttg CD 151 tattctcTtg ttcTtTggat acaattcgac tcttctacgg ccaaatTtca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc aatttttatt CD 251 tgggtataga cggtatctct ttattcttcg tgatattgac cacatttctg CD 301 atccctattt gcatttTagt gggttggtct ggtatgagaa gttatgggaa CD 351 agagtatatt aTagcatttt taattTgtga atttctaatg atcgccgtgt CD 401 tcTgcatgct ggatcttcta ctattctatg tttttTTcga aagcgtgcTa CD 451 atccctatgt tcattattat aggagtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctttatac tttacttgga tctcttttta CD 551 tgctattagc tattctgttg attcttttcc aaacaggaac caccgattta CD 601 caaatatTat taaccacaga atttagtgag cggcgccaaa tctttctatg CD 651 gattgcttTt ttcgcctTtt tcgccgtcaa agtgcctatg gtaccagttc CD 701 atatttggtt acccgaagct catgtagagg cacctacggc aggatccgtc CD 751 atcttggcag gaattcTttt aaaatttgga accTacgggt ttttaagatt CD 801 ttcaataccc atgtttcccg aagcgacact ttgttTtact cctttcattt CD 851 atactttaag cgcgattgct ataatatata cttccttgac cacttTaaga CD 901 cagatcgatc taaagaagat cattgcttac tcctcagtag cccatatgaa CD 951 tctggtgact attggtatgt ttagtccgaa catacaggga attggaggta CD 1001 gtattctacc gatgttaagt catggactgg ttccttcagc cctttttcta CD 1051 tgtgttggtg ttctatatga ccgacataag actcgacttg ttagatatta CD 1101 cggaggttta gtgagcacca tgccgaatct ctctaccatt ttcttttctt CD 1151 ttactttggc caatatgagt tcacctggta ctagcagctt tatcggggaa CD 1201 tttcccatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 agcagcgctt gggatgattt taggtgcggc ctattccctt tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacccg atttcctcca taaattctcc CD 1351 gattcaaatg gcagagaagt ttccatattt ataccttttc ttgttggact CD 1401 cgttcggatg ggtgttcacc ccaaagtgtt cccggactgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggcaaat ttcattga SQ SEQUENCE 496 AA; MLEHFCECYF NLSGLILCPV LGSIILLFIP NSRIRLIRLI GLCASLITFL YSLVLWIQFD SSTAKFQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL IPICILVGWS GMRSYGKEYI IAFLICEFLM IAVFCMLDLL LFYVFFESVL IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL QILLTTEFSE RRQIFLWIAF FAFFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGILLKFG TYGFLRFSIP MFPEATLCFT PFIYTLSAIA IIYTSLTTLR QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE FPILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH* // ID AP006444_66 STANDARD; PRT; 206 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : nad6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98911.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 164882 - 165499 FT DIRECTIONS : positive FT EDITING : 9 P(cCt) -> L(cTt) FT EDITING : 18 A(gCa) -> V(gTa) FT EDITING : 30 P(CCc) -> F(TTc) FT EDITING : 32 P(cCa) -> L(cTa) FT EDITING : 35 R(Cgc) -> C(Tgc) FT EDITING : 54 P(cCa) -> L(cTa) FT EDITING : 57 H(Cat) -> Y(Tat) FT EDITING : 64 S(tCa) -> L(tTa) FT EDITING : 149 S(tCt) -> F(tTt) FT EDITING : 155 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 618 NT; CD 1 atgatacttt ctgttttgtc gagccCtgct ttggtctctg gtttgatggt CD 51 tgCacgtgct aaaaatccgg tacattccgt tttgtttCCc atccCagtct CD 101 ttCgcgacac ttcaggttta cttcttttgt taggtctcga cttcttcgct CD 151 atgatcttcc CagtagttCa tataggagct atagccgttt Cattcctttt CD 201 cgttgttatg atgttccata ttcaaatagc ggagattcac gaagaagtat CD 251 tgcgctattt accagtgagt gggattattg gactgatctt ttggtgggaa CD 301 atgtttttca ttttagataa tgaaagcatt ccattactac caacccaaag CD 351 aaatacgacc tctcttagat atacggttta tgccggaaag gtacgaagtt CD 401 ggactaattt ggaaacattg ggaaatttac tttataccta ctattCtgtc CD 451 tggtttttgg ttCctagtct tattttatta gtagccatga ttggggctat CD 501 agtactgact atgcatagga ctactaaggt gaaaagacag gatgtattcc CD 551 gacgaaatgc tattgatttt aggaggacta taatgaggag gacgactgac CD 601 ccactcacga tctactaa FT EDITED CDNA CD 1 atgatacttt ctgttttgtc gagccTtgct ttggtctctg gtttgatggt CD 51 tgTacgtgct aaaaatccgg tacattccgt tttgtttTTc atccTagtct CD 101 ttTgcgacac ttcaggttta cttcttttgt taggtctcga cttcttcgct CD 151 atgatcttcc TagtagttTa tataggagct atagccgttt Tattcctttt CD 201 cgttgttatg atgttccata ttcaaatagc ggagattcac gaagaagtat CD 251 tgcgctattt accagtgagt gggattattg gactgatctt ttggtgggaa CD 301 atgtttttca ttttagataa tgaaagcatt ccattactac caacccaaag CD 351 aaatacgacc tctcttagat atacggttta tgccggaaag gtacgaagtt CD 401 ggactaattt ggaaacattg ggaaatttac tttataccta ctattTtgtc CD 451 tggtttttgg ttTctagtct tattttatta gtagccatga ttggggctat CD 501 agtactgact atgcatagga ctactaaggt gaaaagacag gatgtattcc CD 551 gacgaaatgc tattgatttt aggaggacta taatgaggag gacgactgac CD 601 ccactcacga tctactaa SQ SEQUENCE 206 AA; MILSVLSSLA LVSGLMVVRA KNPVHSVLFF ILVFCDTSGL LLLLGLDFFA MIFLVVYIGA IAVLFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYFV WFLVSSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD PLTIY* // ID AP006444_69 STANDARD; PRT; 528 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : cox1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98915.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 184280 - 185863 FT DIRECTIONS : negative FT EDITING : 112 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 1584 NT; CD 1 atgaaaaatc tggttcgatg gctgttctcc acaaaccaca aggatatagg CD 51 gactctctat ttcattttcg gtgccattgc tggagtgatg ggcacatgct CD 101 tctcagtact tattcgtatg gaattagcac gacccggcga tcaaattctt CD 151 ggtgggaatc atcaacttta taatgtttta ataacagctc atgctttttt CD 201 aatgatcttt tttatggtta tgccggcgat gataggtgga tttggtaatt CD 251 ggtttgttcc gattctgata ggtgcacctg acatggcatt tccacgatta CD 301 aataatattt cattctggtt gttgccacca agtcCcttgc tcctattaag CD 351 ctcagcctta gtagaagtag gtagcggcac tgggtggacg gtctatccgc CD 401 ccttaagtgg tattaccagt cattctggag gagcagttga tttagcaatt CD 451 tttagtcttc atctatctgg tgtttcatcc attttaggtt ctatcaattt CD 501 tataacaact atcttcaaca tgcgtggacc tggaatgact atgcatagat CD 551 tacccctatt tgtgtggtcc gttctagtga cagcattcct acttttatta CD 601 tcactcccgg tactggcagg ggcaattacc atgttattaa ccgatcgaaa CD 651 ctttaataca accttttttg atcccgctgg agggggagac ccaattttat CD 701 accagcatct cttttggttc ttcggtcatc cagaggtgta tattctcatt CD 751 ctgcctggat tcggtatcat aagtcatatc gtttctactt tttcgggaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgatc agtattggtg CD 851 tcttaggatt tcttgtttgg gctcatcata tgtttactgt gggcttagac CD 901 gtagataccc gtgcctactt caccgcagct accatgatca tagctgtccc CD 951 cactggaatc aaaatcttta gttggatcgc taccatgtgg gggggttcga CD 1001 tacaatacaa aacacccatg ttatttgctg taggatttat ctttttgttc CD 1051 accataggag gactcactgg aatagtcctg gcaaattcag ggctagacat CD 1101 tgctctacat gatacttatt atgtggttgc acatttccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ttatttgcag gattttacta ttgggtgggt CD 1201 aaaatctttg gtcggacata ccctgaaact ttaggtcaaa tccatttttg CD 1251 gatcactttt ttcggggtta atttgacctt ctttcctatg catttcttag CD 1301 ggctttcagg tatgccacgt cgtattccag attatccaga tgcttacgct CD 1351 ggatggaatg ccctttccag ttttggctct tatatatccg tagttgggat CD 1401 ttgttgtttc ttcgtggtcg taacaatcac tttaagcagt ggaaataaca CD 1451 aaagatgtgc tcctagtcct tgggctcttg aacttaattc aactacactg CD 1501 gaatggatgg tacaaagtcc tcctgctttt catacttttg gagaacttcc CD 1551 agctatcaag gagacgaaaa gctatgtgaa gtaa FT EDITED CDNA CD 1 atgaaaaatc tggttcgatg gctgttctcc acaaaccaca aggatatagg CD 51 gactctctat ttcattttcg gtgccattgc tggagtgatg ggcacatgct CD 101 tctcagtact tattcgtatg gaattagcac gacccggcga tcaaattctt CD 151 ggtgggaatc atcaacttta taatgtttta ataacagctc atgctttttt CD 201 aatgatcttt tttatggtta tgccggcgat gataggtgga tttggtaatt CD 251 ggtttgttcc gattctgata ggtgcacctg acatggcatt tccacgatta CD 301 aataatattt cattctggtt gttgccacca agtcTcttgc tcctattaag CD 351 ctcagcctta gtagaagtag gtagcggcac tgggtggacg gtctatccgc CD 401 ccttaagtgg tattaccagt cattctggag gagcagttga tttagcaatt CD 451 tttagtcttc atctatctgg tgtttcatcc attttaggtt ctatcaattt CD 501 tataacaact atcttcaaca tgcgtggacc tggaatgact atgcatagat CD 551 tacccctatt tgtgtggtcc gttctagtga cagcattcct acttttatta CD 601 tcactcccgg tactggcagg ggcaattacc atgttattaa ccgatcgaaa CD 651 ctttaataca accttttttg atcccgctgg agggggagac ccaattttat CD 701 accagcatct cttttggttc ttcggtcatc cagaggtgta tattctcatt CD 751 ctgcctggat tcggtatcat aagtcatatc gtttctactt tttcgggaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgatc agtattggtg CD 851 tcttaggatt tcttgtttgg gctcatcata tgtttactgt gggcttagac CD 901 gtagataccc gtgcctactt caccgcagct accatgatca tagctgtccc CD 951 cactggaatc aaaatcttta gttggatcgc taccatgtgg gggggttcga CD 1001 tacaatacaa aacacccatg ttatttgctg taggatttat ctttttgttc CD 1051 accataggag gactcactgg aatagtcctg gcaaattcag ggctagacat CD 1101 tgctctacat gatacttatt atgtggttgc acatttccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ttatttgcag gattttacta ttgggtgggt CD 1201 aaaatctttg gtcggacata ccctgaaact ttaggtcaaa tccatttttg CD 1251 gatcactttt ttcggggtta atttgacctt ctttcctatg catttcttag CD 1301 ggctttcagg tatgccacgt cgtattccag attatccaga tgcttacgct CD 1351 ggatggaatg ccctttccag ttttggctct tatatatccg tagttgggat CD 1401 ttgttgtttc ttcgtggtcg taacaatcac tttaagcagt ggaaataaca CD 1451 aaagatgtgc tcctagtcct tgggctcttg aacttaattc aactacactg CD 1501 gaatggatgg tacaaagtcc tcctgctttt catacttttg gagaacttcc CD 1551 agctatcaag gagacgaaaa gctatgtgaa gtaa SQ SEQUENCE 528 AA; MKNLVRWLFS TNHKDIGTLY FIFGAIAGVM GTCFSVLIRM ELARPGDQIL GGNHQLYNVL ITAHAFLMIF FMVMPAMIGG FGNWFVPILI GAPDMAFPRL NNISFWLLPP SLLLLLSSAL VEVGSGTGWT VYPPLSGITS HSGGAVDLAI FSLHLSGVSS ILGSINFITT IFNMRGPGMT MHRLPLFVWS VLVTAFLLLL SLPVLAGAIT MLLTDRNFNT TFFDPAGGGD PILYQHLFWF FGHPEVYILI LPGFGIISHI VSTFSGKPVF GYLGMVYAMI SIGVLGFLVW AHHMFTVGLD VDTRAYFTAA TMIIAVPTGI KIFSWIATMW GGSIQYKTPM LFAVGFIFLF TIGGLTGIVL ANSGLDIALH DTYYVVAHFH YVLSMGAVFA LFAGFYYWVG KIFGRTYPET LGQIHFWITF FGVNLTFFPM HFLGLSGMPR RIPDYPDAYA GWNALSSFGS YISVVGICCF FVVVTITLSS GNNKRCAPSP WALELNSTTL EWMVQSPPAF HTFGELPAIK ETKSYVK* // ID AP006444_72 STANDARD; PRT; 555 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : rps3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98918.1 FT PROTEIN_NAME : ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 26/0 FT EDITING : 22 R(Cgg) -> W(Tgg) FT EDITING : 199 F(ttC) -> F(ttT) FT EDITING : 215 S(tcC) -> S(tcT) FT EDITING : 446 S(agC) -> S(agT) FT EDITING : 488 S(tcC) -> S(tcT) FT EDITING : 510 R(Cgt) -> C(Tgt) FT EDITING : 521 P(Cct) -> S(Tct) FT EDITING : 531 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1665 NT; CD 1 atggcacgaa aaggaaatcc gatttcggta agacttggaa aaaatcgtag CD 51 ttcagattca agtCggttca gtgagtatta ttatggtaaa tttgtgtatc CD 101 aagatgtcaa tctgagatct tatttcggtt cgatacgtcc acctacgaga CD 151 ctcacctttg gctttcgtct cggtaggtgt attcttctac attttcctaa CD 201 aagaacattc attcatttct ttcttccccg tcgaccacga cgactgaaac CD 251 gacgtgaaaa aactagaccc ggaaaggaga agggccggtg gtggacgaca CD 301 ttcgggaaag ccgggccgat cgggtgtctt cgcgacgata cagaagaaga CD 351 acgaaacgaa gtgagaggcc ggggggcaag gaaaagagtc gagtcgatca CD 401 ggctcgacga ccgaaagaag caaaacgaaa tccgggggtg gccgaaaaaa CD 451 aaacaacgct atggatacca tgaccgatca ccatcgataa agaagaatct CD 501 ttctaaatca cttcggatca gcggggcctt caagcatccg aaatacgccg CD 551 gggttgtaaa tgacatagcg ttcctgatag aaaatgacga ctccttCaga CD 601 aaaacgaagt tattcaagtt ctttttccca aagaagtccc gctcCgacgg CD 651 cccgacgagt tatctacgga ccctccctgc agtgcgcccc tccttgaatt CD 701 ttttggtcat gcaatacttt tttaatacaa agaaccaaat gaatttcgac CD 751 cccgtcgtag ttctcaatca tttcgtggca ccgggcgcgg ctgaaccatc CD 801 tacgatgggg agagcgaatg cacagggaag aagcttacag aagagaatac CD 851 gttctcgtat cgcttttttt gtagaaagct cgaccagcga gaaaaagtgt CD 901 ttggccgaag ccaaaaatag gttgacccac ttcattcgct tggcgaatga CD 951 tcttcgcttc gcgggaacaa ctaaaaccac catctcgctc tttccattct CD 1001 tcggtgctac ctttttcttt ctaagagatg gggttggggt gtataataac CD 1051 cttgatgccc gggaacaact actcaatcaa ttaagggtca aatgttggaa CD 1101 ccttttgggt aaggataagg taatggaatt gatagagaaa ttcaaaaacc CD 1151 taggtgggat agaagaattg ataaaggtaa tagatatgat gatagaaatc CD 1201 atactgagaa agagaggaat tccgtatagg tacaactctt atttttacga CD 1251 agtaaaaaaa atgcgatctt tcttgtctaa tagaacaaac actaagacct CD 1301 taattgagtc agtcaaaata aaatctgttt atcaaagCgc ttctctgatt CD 1351 gctcaagaca tctcttttca actgaagaac aaaagaagat catttcattc CD 1401 catttttgct aaaatagtga aggagattcc aaaaagggtg gagggaatcc CD 1451 gtatatgttt ttcCggtcga ttaaaagacg cagcagaaaa agctcaaact CD 1501 aaatgctata agcatagaaa aacttctCgt aatgtattta accagaaaat CD 1551 cgattatgct Cctgcggaag tatctactcg ttacggaatc tCaggtgtca CD 1601 aagtgtggat ttcatatagt caaaaaaaag ggggacgtgc tatatccgaa CD 1651 acgtacgaaa tatag FT EDITED CDNA CD 1 atggcacgaa aaggaaatcc gatttcggta agacttggaa aaaatcgtag CD 51 ttcagattca agtTggttca gtgagtatta ttatggtaaa tttgtgtatc CD 101 aagatgtcaa tctgagatct tatttcggtt cgatacgtcc acctacgaga CD 151 ctcacctttg gctttcgtct cggtaggtgt attcttctac attttcctaa CD 201 aagaacattc attcatttct ttcttccccg tcgaccacga cgactgaaac CD 251 gacgtgaaaa aactagaccc ggaaaggaga agggccggtg gtggacgaca CD 301 ttcgggaaag ccgggccgat cgggtgtctt cgcgacgata cagaagaaga CD 351 acgaaacgaa gtgagaggcc ggggggcaag gaaaagagtc gagtcgatca CD 401 ggctcgacga ccgaaagaag caaaacgaaa tccgggggtg gccgaaaaaa CD 451 aaacaacgct atggatacca tgaccgatca ccatcgataa agaagaatct CD 501 ttctaaatca cttcggatca gcggggcctt caagcatccg aaatacgccg CD 551 gggttgtaaa tgacatagcg ttcctgatag aaaatgacga ctccttTaga CD 601 aaaacgaagt tattcaagtt ctttttccca aagaagtccc gctcTgacgg CD 651 cccgacgagt tatctacgga ccctccctgc agtgcgcccc tccttgaatt CD 701 ttttggtcat gcaatacttt tttaatacaa agaaccaaat gaatttcgac CD 751 cccgtcgtag ttctcaatca tttcgtggca ccgggcgcgg ctgaaccatc CD 801 tacgatgggg agagcgaatg cacagggaag aagcttacag aagagaatac CD 851 gttctcgtat cgcttttttt gtagaaagct cgaccagcga gaaaaagtgt CD 901 ttggccgaag ccaaaaatag gttgacccac ttcattcgct tggcgaatga CD 951 tcttcgcttc gcgggaacaa ctaaaaccac catctcgctc tttccattct CD 1001 tcggtgctac ctttttcttt ctaagagatg gggttggggt gtataataac CD 1051 cttgatgccc gggaacaact actcaatcaa ttaagggtca aatgttggaa CD 1101 ccttttgggt aaggataagg taatggaatt gatagagaaa ttcaaaaacc CD 1151 taggtgggat agaagaattg ataaaggtaa tagatatgat gatagaaatc CD 1201 atactgagaa agagaggaat tccgtatagg tacaactctt atttttacga CD 1251 agtaaaaaaa atgcgatctt tcttgtctaa tagaacaaac actaagacct CD 1301 taattgagtc agtcaaaata aaatctgttt atcaaagTgc ttctctgatt CD 1351 gctcaagaca tctcttttca actgaagaac aaaagaagat catttcattc CD 1401 catttttgct aaaatagtga aggagattcc aaaaagggtg gagggaatcc CD 1451 gtatatgttt ttcTggtcga ttaaaagacg cagcagaaaa agctcaaact CD 1501 aaatgctata agcatagaaa aacttctTgt aatgtattta accagaaaat CD 1551 cgattatgct Tctgcggaag tatctactcg ttacggaatc tTaggtgtca CD 1601 aagtgtggat ttcatatagt caaaaaaaag ggggacgtgc tatatccgaa CD 1651 acgtacgaaa tatag SQ SEQUENCE 555 AA; MARKGNPISV RLGKNRSSDS SWFSEYYYGK FVYQDVNLRS YFGSIRPPTR LTFGFRLGRC ILLHFPKRTF IHFFLPRRPR RLKRREKTRP GKEKGRWWTT FGKAGPIGCL RDDTEEERNE VRGRGARKRV ESIRLDDRKK QNEIRGWPKK KQRYGYHDRS PSIKKNLSKS LRISGAFKHP KYAGVVNDIA FLIENDDSFR KTKLFKFFFP KKSRSDGPTS YLRTLPAVRP SLNFLVMQYF FNTKNQMNFD PVVVLNHFVA PGAAEPSTMG RANAQGRSLQ KRIRSRIAFF VESSTSEKKC LAEAKNRLTH FIRLANDLRF AGTTKTTISL FPFFGATFFF LRDGVGVYNN LDAREQLLNQ LRVKCWNLLG KDKVMELIEK FKNLGGIEEL IKVIDMMIEI ILRKRGIPYR YNSYFYEVKK MRSFLSNRTN TKTLIESVKI KSVYQSASLI AQDISFQLKN KRRSFHSIFA KIVKEIPKRV EGIRICFSGR LKDAAEKAQT KCYKHRKTSC NVFNQKIDYA SAEVSTRYGI LGVKVWISYS QKKGGRAISE TYEI* // ID AP006444_73 STANDARD; PRT; 186 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : rpl5 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98919.1 FT PROTEIN_NAME : ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 202531 - 203088 FT DIRECTIONS : positive FT EDITING : 12 S(tCa) -> L(tTa) FT EDITING : 16 P(cCg) -> L(cTg) FT EDITING : 20 P(cCg) -> L(cTg) FT EDITING : 22 H(Cac) -> Y(Tac) FT EDITING : 31 S(tCg) -> L(tTg) FT EDITING : 57 R(Cgc) -> C(Tgc) FT EDITING : 106 S(tCg) -> L(tTg) FT EDITING : 110 S(tCg) -> L(tTg) FT EDITING : 171 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 558 NT; CD 1 atgtttccac tcaattttca ttacgaagat gtatCacgtc aagatcCgtt CD 51 gctcaaacCg aatCacgcca acgttatgga agttcctgga tCgtgtgaaa CD 101 taagagtagt accaaaggca ccctataatt tcataataaa aaatggaaaa CD 151 ttggctatgg agattccgCg cggtcagaaa ttcatacaga cacaaagggg CD 201 ttcgacagga aagtcctttc gatctaatcc attcttgggg tcaaataaag CD 251 acaaaggata tgtaagtgac ctagcacgac aaagcactct ccgagggcat CD 301 ggaatgtcta atttttCggt cagaatctCg acagtaatgt ctctgttaga CD 351 ttttccggtc gaaatacgga aaaactccat tcaattctcg atggaaacgg CD 401 agttttgcga attctccccg gaactggaag atcatttcga gatcttcgaa CD 451 catattagag ggttcaatgt gactattgtc acttcggcca acacacaaga CD 501 tgagacttta cCactgtgga gcggcttttt gcaaaaagat gagggggaaa CD 551 ctcagtaa FT EDITED CDNA CD 1 atgtttccac tcaattttca ttacgaagat gtatTacgtc aagatcTgtt CD 51 gctcaaacTg aatTacgcca acgttatgga agttcctgga tTgtgtgaaa CD 101 taagagtagt accaaaggca ccctataatt tcataataaa aaatggaaaa CD 151 ttggctatgg agattccgTg cggtcagaaa ttcatacaga cacaaagggg CD 201 ttcgacagga aagtcctttc gatctaatcc attcttgggg tcaaataaag CD 251 acaaaggata tgtaagtgac ctagcacgac aaagcactct ccgagggcat CD 301 ggaatgtcta atttttTggt cagaatctTg acagtaatgt ctctgttaga CD 351 ttttccggtc gaaatacgga aaaactccat tcaattctcg atggaaacgg CD 401 agttttgcga attctccccg gaactggaag atcatttcga gatcttcgaa CD 451 catattagag ggttcaatgt gactattgtc acttcggcca acacacaaga CD 501 tgagacttta cTactgtgga gcggcttttt gcaaaaagat gagggggaaa CD 551 ctcagtaa SQ SEQUENCE 186 AA; MFPLNFHYED VLRQDLLLKL NYANVMEVPG LCEIRVVPKA PYNFIIKNGK LAMEIPCGQK FIQTQRGSTG KSFRSNPFLG SNKDKGYVSD LARQSTLRGH GMSNFLVRIL TVMSLLDFPV EIRKNSIQFS METEFCEFSP ELEDHFEIFE HIRGFNVTIV TSANTQDETL LLWSGFLQKD EGETQ* // ID AP006444_75 STANDARD; PRT; 394 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : cob FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98921.1 FT PROTEIN_NAME : apocytochrome b FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 204898 - 206079 FT DIRECTIONS : positive FT EDITING : 96 L(Ctt) -> F(Ttt) FT EDITING : 109 H(Cat) -> Y(Tat) FT EDITING : 190 H(Cat) -> Y(Tat) FT EDITING : 285 H(Cat) -> Y(Tat) FT EDITING : 303 P(cCa) -> L(cTa) FT EDITING : 328 H(Cac) -> Y(Tac) FT EDITING : 362 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 1182 NT; CD 1 atgactataa ggaaccaacg attctctctt cttaaacaac ctatatcctc CD 51 cacacttaat cagcatttag tagattatcc aaccccgagc aatcttagtt CD 101 attggtgggg gttcggtccg ttagctggta tttgtttagt cattcagata CD 151 gtgactggcg tttttttagc tatgcattac acacctcatg tggatttagc CD 201 tttcaacagc gtagaacaca ttatgagaga tgttgaaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttCttat tgtggtttac CD 301 cttcatattt ttcgtggtct atatCatgcg agttatagca gtcctaggga CD 351 atttgtttgg tgtcttggag ttgtaatctt cctattaatg attgtgacag CD 401 cttttatagg atatgtacta ccttggggtc agatgagctt ttggggagct CD 451 acagtaatta caagcttagc tagcgccata cctgtagtag gagataccat CD 501 agtgacttgg ctttggggtg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tcttcatCat ttactcccct ttattttagt aggcgccagt CD 601 cttcttcatc tggccgcatt gcatcaatat ggatcaaata atccattggg CD 651 tgtacattct gagatggata aaatagcttt ttacccttat ttttatgtca CD 701 aggatctagt tggttgggta gcttttgcta tctttttttc tatttggatt CD 751 ttttatgctc ctaatgtttt gggacatccc gacaattata tacctgctaa CD 801 tccgatgtcc accccgcctc atattgtgcc ggaatggtat ttcctaccga CD 851 tcCatgccat tcttcgtagt atacctgaca aagcgggagg tgtagccgca CD 901 atagcacCag tttttatatg tctcttggct ttaccttttt ttaaaagtat CD 951 gtatgtgcgt agttcaagtt ttcgaccgat tCaccaagga atgttttggt CD 1001 tgcttttggc ggattgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaagcaccat ttgttactat tggacaaatt tctCctttgg ttttcttctt CD 1101 gttctttgcc ataacgccca ttctgggacg agttggaaga ggaattccta CD 1151 attcttacac ggatgagact gatcacacct ga FT EDITED CDNA CD 1 atgactataa ggaaccaacg attctctctt cttaaacaac ctatatcctc CD 51 cacacttaat cagcatttag tagattatcc aaccccgagc aatcttagtt CD 101 attggtgggg gttcggtccg ttagctggta tttgtttagt cattcagata CD 151 gtgactggcg tttttttagc tatgcattac acacctcatg tggatttagc CD 201 tttcaacagc gtagaacaca ttatgagaga tgttgaaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttTttat tgtggtttac CD 301 cttcatattt ttcgtggtct atatTatgcg agttatagca gtcctaggga CD 351 atttgtttgg tgtcttggag ttgtaatctt cctattaatg attgtgacag CD 401 cttttatagg atatgtacta ccttggggtc agatgagctt ttggggagct CD 451 acagtaatta caagcttagc tagcgccata cctgtagtag gagataccat CD 501 agtgacttgg ctttggggtg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tcttcatTat ttactcccct ttattttagt aggcgccagt CD 601 cttcttcatc tggccgcatt gcatcaatat ggatcaaata atccattggg CD 651 tgtacattct gagatggata aaatagcttt ttacccttat ttttatgtca CD 701 aggatctagt tggttgggta gcttttgcta tctttttttc tatttggatt CD 751 ttttatgctc ctaatgtttt gggacatccc gacaattata tacctgctaa CD 801 tccgatgtcc accccgcctc atattgtgcc ggaatggtat ttcctaccga CD 851 tcTatgccat tcttcgtagt atacctgaca aagcgggagg tgtagccgca CD 901 atagcacTag tttttatatg tctcttggct ttaccttttt ttaaaagtat CD 951 gtatgtgcgt agttcaagtt ttcgaccgat tTaccaagga atgttttggt CD 1001 tgcttttggc ggattgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaagcaccat ttgttactat tggacaaatt tctTctttgg ttttcttctt CD 1101 gttctttgcc ataacgccca ttctgggacg agttggaaga ggaattccta CD 1151 attcttacac ggatgagact gatcacacct ga SQ SEQUENCE 394 AA; MTIRNQRFSL LKQPISSTLN QHLVDYPTPS NLSYWWGFGP LAGICLVIQI VTGVFLAMHY TPHVDLAFNS VEHIMRDVEG GWLLRYMHAN GASMFFIVVY LHIFRGLYYA SYSSPREFVW CLGVVIFLLM IVTAFIGYVL PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNRFFSLHY LLPFILVGAS LLHLAALHQY GSNNPLGVHS EMDKIAFYPY FYVKDLVGWV AFAIFFSIWI FYAPNVLGHP DNYIPANPMS TPPHIVPEWY FLPIYAILRS IPDKAGGVAA IALVFICLLA LPFFKSMYVR SSSFRPIYQG MFWLLLADCL LLGWIGCQPV EAPFVTIGQI SSLVFFLFFA ITPILGRVGR GIPNSYTDET DHT* // ID AP006444_76 STANDARD; PRT; 261 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : cox2-1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98922.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 234/1 FT EDITING : 9 L(CtC) -> F(TtT) FT EDITING : 24 S(tCt) -> F(tTt) FT EDITING : 46 L(ctC) -> L(ctT) FT EDITING : 85 R(Cgg) -> W(Tgg) FT EDITING : 93 S(tCg) -> L(tTg) FT EDITING : 106 P(Cca) -> S(Tca) FT EDITING : 159 S(tCa) -> L(tTa) FT EDITING : 186 P(cCt) -> L(cTt) FT EDITING : 194 S(tCa) -> L(tTa) FT EDITING : 233 T(aCg) -> M(aTg) FT EDITING : 241 P(Cct) -> S(Tct) FT EDITING : 248 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 783 NT; CD 1 atgattgttc taaaatggtt attcCtCaca atttctcctt gtgatgcagc CD 51 ggaaccatgg caattaggat Ctcaagacgc agctacacct ataatgcaag CD 101 gaataataga cttacatcac gatatctttt tcttcctCat tctgattttg CD 151 gttttcgtat tatggatctt ggttcgcgct ttatggcatt tccactataa CD 201 agaaaatgca atcccgcaaa ggattgttca tggaactact atcgagattc CD 251 ttCggaccat ctttcctagt ctcatctCga tgttcattgc tataccatca CD 301 tttgctctct tatacCcaat ggacgaggta gtagtagatc cagccattac CD 351 tatcaaagct attggacatc aatggtattg gacttatgag tattctgact CD 401 ataacagttc cgatgagcag tcactcactt ttgacagtta tatgattcca CD 451 gaagaagatc tagaattggg tcaatCacgt ttattagaag tggacaatag CD 501 agtggttgta ccagccaaaa ctcatctacg tattattgta acatctgctg CD 551 atgtacCtca tagttgggct gtaccttcct Caggtgtcaa atgtgatgct CD 601 gtacctggtc gtttaaatca aatctctatt ttggtacaac gagaaggagt CD 651 ttactatggt cagtgcagtg agatttgtgg aactaatcat gcctttaCgc CD 701 ctatcgtcgt agaagctgtt Cctaggaaag attatggttc tCgggtatcc CD 751 aatcaattaa tcccccaaac cggggaagct taa FT EDITED CDNA CD 1 atgattgttc taaaatggtt attcTtTaca atttctcctt gtgatgcagc CD 51 ggaaccatgg caattaggat Ttcaagacgc agctacacct ataatgcaag CD 101 gaataataga cttacatcac gatatctttt tcttcctTat tctgattttg CD 151 gttttcgtat tatggatctt ggttcgcgct ttatggcatt tccactataa CD 201 agaaaatgca atcccgcaaa ggattgttca tggaactact atcgagattc CD 251 ttTggaccat ctttcctagt ctcatctTga tgttcattgc tataccatca CD 301 tttgctctct tatacTcaat ggacgaggta gtagtagatc cagccattac CD 351 tatcaaagct attggacatc aatggtattg gacttatgag tattctgact CD 401 ataacagttc cgatgagcag tcactcactt ttgacagtta tatgattcca CD 451 gaagaagatc tagaattggg tcaatTacgt ttattagaag tggacaatag CD 501 agtggttgta ccagccaaaa ctcatctacg tattattgta acatctgctg CD 551 atgtacTtca tagttgggct gtaccttcct Taggtgtcaa atgtgatgct CD 601 gtacctggtc gtttaaatca aatctctatt ttggtacaac gagaaggagt CD 651 ttactatggt cagtgcagtg agatttgtgg aactaatcat gcctttaTgc CD 701 ctatcgtcgt agaagctgtt Tctaggaaag attatggttc tTgggtatcc CD 751 aatcaattaa tcccccaaac cggggaagct taa SQ SEQUENCE 261 AA; MIVLKWLFFT ISPCDAAEPW QLGFQDAATP IMQGIIDLHH DIFFFLILIL VFVLWILVRA LWHFHYKENA IPQRIVHGTT IEILWTIFPS LILMFIAIPS FALLYSMDEV VVDPAITIKA IGHQWYWTYE YSDYNSSDEQ SLTFDSYMIP EEDLELGQLR LLEVDNRVVV PAKTHLRIIV TSADVLHSWA VPSLGVKCDA VPGRLNQISI LVQREGVYYG QCSEICGTNH AFMPIVVEAV SRKDYGSWVS NQLIPQTGEA * // ID AP006444_78 STANDARD; PRT; 248 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : ccmC FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98924.1 FT PROTEIN_NAME : cytochrome c biogenesis ccmC FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 212548 - 213291 FT DIRECTIONS : positive FT EDITING : 35 H(Cat) -> Y(Tat) FT EDITING : 60 A(gCg) -> V(gTg) FT EDITING : 62 R(Cgg) -> W(Tgg) FT EDITING : 111 R(Cgg) -> W(Tgg) FT EDITING : 127 T(acC) -> T(acT) FT EDITING : 132 S(tCg) -> L(tTg) FT EDITING : 134 L(Ctt) -> F(Ttt) FT EDITING : 141 R(Cgt) -> C(Tgt) FT EDITING : 146 P(Cct) -> S(Tct) FT EDITING : 149 P(cCg) -> L(cTg) FT EDITING : 153 S(tCa) -> L(tTa) FT EDITING : 155 R(Cgt) -> C(Tgt) FT EDITING : 156 A(gCt) -> V(gTt) FT EDITING : 158 P(cCg) -> L(cTg) FT EDITING : 166 S(tCt) -> F(tTt) FT EDITING : 174 S(tCg) -> L(tTg) FT EDITING : 183 S(tCt) -> F(tTt) FT EDITING : 190 P(Cct) -> S(Tct) FT EDITING : 192 P(cCc) -> L(cTc) FT EDITING : 203 P(cCc) -> L(cTc) FT EDITING : 205 S(tCa) -> L(tTa) FT EDITING : 206 T(acC) -> T(acT) FT EDITING : 207 R(Cgt) -> C(Tgt) FT EDITING : 208 I(atC) -> I(atT) FT EDITING : 217 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 744 NT; CD 1 atgtccgttc cgttattaca accttctttt ttgatgtcaa agaccagaag CD 51 ctacgcgcaa attctcattg ggtcttggtt gttcttaaca gcgatggcta CD 101 ttCatttaag tcttggggta gcaccactag atcttcaaca aggtggaaat CD 151 tctcgtattc tctatgtaca tgttcctgCg gctCggatga gtattattgt CD 201 ttatatcgcc acggctataa acactttctt gttcctatta acaaaacatc CD 251 ccctttatct tcgctcttcc ggaaccggta tagaaatggg tgcttttttt CD 301 acgttgttta ccttagttac tggggggttt Cggggaagac caatgtgggg CD 351 gaccttttgg gtgtgggatg ctcgtttgac Ctctgtattc atctCgtttC CD 401 ttatttacct gggtgcactg Cgttttcaaa agcttCctgt cgaacCggct CD 451 tctatttCaa ttCgtgCtgg acCgatcgat ataccaataa taaagtCttc CD 501 agtcaactgg tggaatacat Cgcatcaacc tgggagcatt agccgatCtg CD 551 gtacatcaat acatgttCct atgcCcattc caatcttgtc taactttgct CD 601 aacttccCct tctCaacCCg tatCttgttt gttctggaaa cacgtcttcC CD 651 tattccatct tttctcgaat ctcctataac ggaagaaatt gaagctcgag CD 701 aaggaatacc aaaacctagt tcactcgctt gcatccatgg ctga FT EDITED CDNA CD 1 atgtccgttc cgttattaca accttctttt ttgatgtcaa agaccagaag CD 51 ctacgcgcaa attctcattg ggtcttggtt gttcttaaca gcgatggcta CD 101 ttTatttaag tcttggggta gcaccactag atcttcaaca aggtggaaat CD 151 tctcgtattc tctatgtaca tgttcctgTg gctTggatga gtattattgt CD 201 ttatatcgcc acggctataa acactttctt gttcctatta acaaaacatc CD 251 ccctttatct tcgctcttcc ggaaccggta tagaaatggg tgcttttttt CD 301 acgttgttta ccttagttac tggggggttt Tggggaagac caatgtgggg CD 351 gaccttttgg gtgtgggatg ctcgtttgac Ttctgtattc atctTgtttT CD 401 ttatttacct gggtgcactg Tgttttcaaa agcttTctgt cgaacTggct CD 451 tctatttTaa ttTgtgTtgg acTgatcgat ataccaataa taaagtTttc CD 501 agtcaactgg tggaatacat Tgcatcaacc tgggagcatt agccgatTtg CD 551 gtacatcaat acatgttTct atgcTcattc caatcttgtc taactttgct CD 601 aacttccTct tctTaacTTg tatTttgttt gttctggaaa cacgtcttcT CD 651 tattccatct tttctcgaat ctcctataac ggaagaaatt gaagctcgag CD 701 aaggaatacc aaaacctagt tcactcgctt gcatccatgg ctga SQ SEQUENCE 248 AA; MSVPLLQPSF LMSKTRSYAQ ILIGSWLFLT AMAIYLSLGV APLDLQQGGN SRILYVHVPV AWMSIIVYIA TAINTFLFLL TKHPLYLRSS GTGIEMGAFF TLFTLVTGGF WGRPMWGTFW VWDARLTSVF ILFFIYLGAL CFQKLSVELA SILICVGLID IPIIKFSVNW WNTLHQPGSI SRFGTSIHVS MLIPILSNFA NFLFLTCILF VLETRLLIPS FLESPITEEI EAREGIPKPS SLACIHG* // ID AP006444_79 STANDARD; PRT; 363 AA. AC AP006444; DT Tue Jul 21 07:02:09 2009 DE Brassica napus mitochondrial DNA, complete genome. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Nucleic Acids Res. 31 (20), 5907-5916 (2003) RL PUBMED 14530439 FT Full length CDS FT GENE : rps4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC98926.1 FT PROTEIN_NAME : ribosomal protein S4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 220026 - 221114 FT DIRECTIONS : negative FT EDITING : 9 Q(Caa) -> *(Taa) FT EDITING : 26 S(tCa) -> L(tTa) FT EDITING : 30 R(Cgg) -> W(Tgg) FT EDITING : 59 P(Ccg) -> S(Tcg) FT EDITING : 76 P(Ccc) -> S(Tcc) FT EDITING : 79 H(Cat) -> Y(Tat) FT EDITING : 100 P(cCa) -> L(cTa) FT EDITING : 103 P(cCa) -> L(cTa) FT EDITING : 111 P(cCg) -> L(cTg) FT EDITING : 126 P(cCg) -> L(cTg) FT EDITING : 175 S(tCa) -> L(tTa) FT EDITING : 312 I(atC) -> I(atT) FT EDITING : 319 S(tCg) -> L(tTg) FT EDITING : 323 H(Cat) -> Y(Tat) FT EDITING : 331 S(tCt) -> F(tTt) FT EDITING : 348 P(CCa) -> L(TTa) FT EDITING : 351 P(cCt) -> L(cTt) FT EDITING : 353 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 1089 NT; CD 1 atgtggctgc ttaaaaaact gattCaacga gatatagata tgtccccatt CD 51 aagatttcaa acttgtcgtc tactttCagg aaatgttCgg aacagagaac CD 101 tgacaataat acaacgtcgc attctccgaa gattgaggaa caggaagaga CD 151 tctattaaga agagaaagat ttatCcgaaa aaatatctta ccagttacat CD 201 acaattacaa actacacgaa agttgCccct ttttCatggg gatttaccca CD 251 tcacagagat gcacagagga acaaaacgaa cttcatatat cccttttcCa CD 301 ctcaatcCag aaacaagatt tgacgttatt cCgcttcgtc tccattttct CD 351 tgaaactatt cctcaagcaa ggcagcCgat aagtcatcga agggtttgtg CD 401 tgaataaagg aatggtaagc attactcatt tgaaactttc ccacggtgat CD 451 ataatatctt ttcaagaaaa taacgcgata atacgcggtg aagaaataag CD 501 gagatctttc tataaagaaa tttCagttga aaaaatcata ggcaaattac CD 551 tgcatcaacc gctaagaatg tggagaagaa gcaaaactga atggttccac CD 601 ctactcaaaa ctaagagggg atgccgccta ctactaaaat cccggttttt CD 651 gcaacagttg cgttcttcta tgcaagaaga agacttagaa agaacaaaga CD 701 agtttggatc cgaaaaagta tgcttaggaa gttccttcgc tgagcacaag CD 751 agaatgaaga ggaatttgtt aaaatcccta ttcttatcga agagaaggaa CD 801 ggagaaaaac ctaaatcttc ctactcgaac aatcagtcct atagtttaca CD 851 actcttcttt atctttatat agtaattcga cctattgctt cgcatccccc CD 901 cataagttga ctatgaagag aagaatcaaa aggatCgaac tacctactca CD 951 ttattCggag gttaatCata gaacaccaaa agctgtggta tCttatggac CD 1001 ctaacatagg tcatatccct cacgacataa gattaaaaga tCCaaacctt CD 1051 cCtcttCgga gcagaaacgg acgtggccaa aacatataa FT EDITED CDNA CD 1 atgtggctgc ttaaaaaact gattTaacga gatatagata tgtccccatt CD 51 aagatttcaa acttgtcgtc tactttTagg aaatgttTgg aacagagaac CD 101 tgacaataat acaacgtcgc attctccgaa gattgaggaa caggaagaga CD 151 tctattaaga agagaaagat ttatTcgaaa aaatatctta ccagttacat CD 201 acaattacaa actacacgaa agttgTccct ttttTatggg gatttaccca CD 251 tcacagagat gcacagagga acaaaacgaa cttcatatat cccttttcTa CD 301 ctcaatcTag aaacaagatt tgacgttatt cTgcttcgtc tccattttct CD 351 tgaaactatt cctcaagcaa ggcagcTgat aagtcatcga agggtttgtg CD 401 tgaataaagg aatggtaagc attactcatt tgaaactttc ccacggtgat CD 451 ataatatctt ttcaagaaaa taacgcgata atacgcggtg aagaaataag CD 501 gagatctttc tataaagaaa tttTagttga aaaaatcata ggcaaattac CD 551 tgcatcaacc gctaagaatg tggagaagaa gcaaaactga atggttccac CD 601 ctactcaaaa ctaagagggg atgccgccta ctactaaaat cccggttttt CD 651 gcaacagttg cgttcttcta tgcaagaaga agacttagaa agaacaaaga CD 701 agtttggatc cgaaaaagta tgcttaggaa gttccttcgc tgagcacaag CD 751 agaatgaaga ggaatttgtt aaaatcccta ttcttatcga agagaaggaa CD 801 ggagaaaaac ctaaatcttc ctactcgaac aatcagtcct atagtttaca CD 851 actcttcttt atctttatat agtaattcga cctattgctt cgcatccccc CD 901 cataagttga ctatgaagag aagaatcaaa aggatTgaac tacctactca CD 951 ttattTggag gttaatTata gaacaccaaa agctgtggta tTttatggac CD 1001 ctaacatagg tcatatccct cacgacataa gattaaaaga tTTaaacctt CD 1051 cTtcttTgga gcagaaacgg acgtggccaa aacatataa SQ SEQUENCE 363 AA; MWLLKKLI*R DIDMSPLRFQ TCRLLLGNVW NRELTIIQRR ILRRLRNRKR SIKKRKIYSK KYLTSYIQLQ TTRKLSLFYG DLPITEMHRG TKRTSYIPFL LNLETRFDVI LLRLHFLETI PQARQLISHR RVCVNKGMVS ITHLKLSHGD IISFQENNAI IRGEEIRRSF YKEILVEKII GKLLHQPLRM WRRSKTEWFH LLKTKRGCRL LLKSRFLQQL RSSMQEEDLE RTKKFGSEKV CLGSSFAEHK RMKRNLLKSL FLSKRRKEKN LNLPTRTISP IVYNSSLSLY SNSTYCFASP HKLTMKRRIK RIELPTHYLE VNYRTPKAVV FYGPNIGHIP HDIRLKDLNL LLWSRNGRGQ NI* // ID AP009123_71 STANDARD; PRT; 501 AA. AC AP009123; DT Tue Jul 21 07:03:08 2009 DE Gossypium barbadense chloroplast DNA, complete genome. OS chloroplast Gossypium barbadense (sea-island cotton) OC Gossypium barbadense RN [1] RL Genes Genet. Syst. 81 (5), 311-321 (2006) RL PUBMED 17159292 FT Full length CDS FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF41297.1 FT PROTEIN_NAME : NADH dehydrogenase ND4 subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 120819 - 122321 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 aCgaattatt ttccttggtt aacaataatt gtatttttac caatatctgc CD 51 aggttcttta cttttctttc ttcctcataa aggaaataag ctaattaagt CD 101 ggtatacaat atgtatatgc attctcgaac tccttctaac aacctatgca CD 151 ttttgttatc atttccgatt ggacgatcca ttaatccagc tggcggaaga CD 201 ttataaatgg ataaattttt ttgattttta ctggagattg ggaatagatg CD 251 gactttctat agggcccatt ttactgacag gatttatcac cactttagcc CD 301 actttggcgg cttggccagt tactcgagat tcgcgattat ttcatttcct CD 351 gatgctagca atgtacagtg gtcaaatagg atcattttct tctcgagacc CD 401 ttttactttt tttcatcatg tgggagttcg aattaattcc cgtttatcta CD 451 cttctatcca tgtggggggg aaagaaacgt ctgtactcgg ctacaaaatt CD 501 tattttgtac accgcagggg gttccgtttt tctattaata ggagttttgg CD 551 gtctcggttt atacggttct aatgaaccaa cattaaattt tgaaacatta CD 601 gctaatcaat catatcctgt cgcactggaa ataatattct atattggatt CD 651 tcttattgct tttgctgtca aatcgccgat tataccctta catacgtggt CD 701 taccggatac ccacggggag gcccattaca gtacttgtat gcttctagcc CD 751 ggaattttat taaaaatggg agcatatgga ttagttcgga tcaatatgga CD 801 attattaccc catgcgcatt ccatattttc tccctggttg ataatagtgg CD 851 gtacaatgca aataatttat gcagcttcaa catctcttgg tcaacggaat CD 901 ttaaaaaaaa gaatagccta ttcctccgta tctcatatgg gtttcataat CD 951 tataggaatt ggttcgataa ctgatacggg actcaacgga gctattttac CD 1001 aaataatatc tcatggcttt atcggtgctg cacttttttt cttggcagga CD 1051 acgagttatg atagaatgcg tcttgtttat ctcgacgaaa tgggcggaat CD 1101 ggccgtttcg attcccaaaa tatttacgat gttcagtatc ttatccatgg CD 1151 cttctcttgc attaccgggc atgagtggtt ttgttgcaga attgatagtc CD 1201 ttttttggaa taattaccag ccaaaaatat tttttaatgc caaaaatact CD 1251 aattactttc gtaatggcaa ttggaatgat attaactcct atttattcat CD 1301 tatctatgtc acgtcaaatg ttctatggat acaagctatt taatgctcca CD 1351 agttcttatt tttttgattc tggaccacga gagttatttg tttcgatctc CD 1401 tatctttcta ccagtaatag gtattggtat ttatccggat ttcgttctct CD 1451 cattatcagg tgagaaagtc gaaactattc tatataatta tttttataga CD 1501 tag FT EDITED CDNA CD 1 aTgaattatt ttccttggtt aacaataatt gtatttttac caatatctgc CD 51 aggttcttta cttttctttc ttcctcataa aggaaataag ctaattaagt CD 101 ggtatacaat atgtatatgc attctcgaac tccttctaac aacctatgca CD 151 ttttgttatc atttccgatt ggacgatcca ttaatccagc tggcggaaga CD 201 ttataaatgg ataaattttt ttgattttta ctggagattg ggaatagatg CD 251 gactttctat agggcccatt ttactgacag gatttatcac cactttagcc CD 301 actttggcgg cttggccagt tactcgagat tcgcgattat ttcatttcct CD 351 gatgctagca atgtacagtg gtcaaatagg atcattttct tctcgagacc CD 401 ttttactttt tttcatcatg tgggagttcg aattaattcc cgtttatcta CD 451 cttctatcca tgtggggggg aaagaaacgt ctgtactcgg ctacaaaatt CD 501 tattttgtac accgcagggg gttccgtttt tctattaata ggagttttgg CD 551 gtctcggttt atacggttct aatgaaccaa cattaaattt tgaaacatta CD 601 gctaatcaat catatcctgt cgcactggaa ataatattct atattggatt CD 651 tcttattgct tttgctgtca aatcgccgat tataccctta catacgtggt CD 701 taccggatac ccacggggag gcccattaca gtacttgtat gcttctagcc CD 751 ggaattttat taaaaatggg agcatatgga ttagttcgga tcaatatgga CD 801 attattaccc catgcgcatt ccatattttc tccctggttg ataatagtgg CD 851 gtacaatgca aataatttat gcagcttcaa catctcttgg tcaacggaat CD 901 ttaaaaaaaa gaatagccta ttcctccgta tctcatatgg gtttcataat CD 951 tataggaatt ggttcgataa ctgatacggg actcaacgga gctattttac CD 1001 aaataatatc tcatggcttt atcggtgctg cacttttttt cttggcagga CD 1051 acgagttatg atagaatgcg tcttgtttat ctcgacgaaa tgggcggaat CD 1101 ggccgtttcg attcccaaaa tatttacgat gttcagtatc ttatccatgg CD 1151 cttctcttgc attaccgggc atgagtggtt ttgttgcaga attgatagtc CD 1201 ttttttggaa taattaccag ccaaaaatat tttttaatgc caaaaatact CD 1251 aattactttc gtaatggcaa ttggaatgat attaactcct atttattcat CD 1301 tatctatgtc acgtcaaatg ttctatggat acaagctatt taatgctcca CD 1351 agttcttatt tttttgattc tggaccacga gagttatttg tttcgatctc CD 1401 tatctttcta ccagtaatag gtattggtat ttatccggat ttcgttctct CD 1451 cattatcagg tgagaaagtc gaaactattc tatataatta tttttataga CD 1501 tag SQ SEQUENCE 501 AA; MNYFPWLTII VFLPISAGSL LFFLPHKGNK LIKWYTICIC ILELLLTTYA FCYHFRLDDP LIQLAEDYKW INFFDFYWRL GIDGLSIGPI LLTGFITTLA TLAAWPVTRD SRLFHFLMLA MYSGQIGSFS SRDLLLFFIM WEFELIPVYL LLSMWGGKKR LYSATKFILY TAGGSVFLLI GVLGLGLYGS NEPTLNFETL ANQSYPVALE IIFYIGFLIA FAVKSPIIPL HTWLPDTHGE AHYSTCMLLA GILLKMGAYG LVRINMELLP HAHSIFSPWL IIVGTMQIIY AASTSLGQRN LKKRIAYSSV SHMGFIIIGI GSITDTGLNG AILQIISHGF IGAALFFLAG TSYDRMRLVY LDEMGGMAVS IPKIFTMFSI LSMASLALPG MSGFVAELIV FFGIITSQKY FLMPKILITF VMAIGMILTP IYSLSMSRQM FYGYKLFNAP SSYFFDSGPR ELFVSISIFL PVIGIGIYPD FVLSLSGEKV ETILYNYFYR * // ID AP009339_55 STANDARD; PRT; 32 AA. AC AP009339; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis chloroplast DNA, complete genome. OS chloroplast Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Phylogenet. Evol. 37 (1), 214-234 (2005) RL PUBMED 16182153 FT Full length CDS FT GENE : petL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF64963.1 FT PROTEIN_NAME : cytochrome b/f complex 3.5 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 70180 - 70275 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 96 NT; CD 1 aCgcctacta taactagcta ttttggcttt ctattggctt ccctaatctt CD 51 caccttagcc ctattcattg gttcaagcaa gatacgactt ctttga FT EDITED CDNA CD 1 aTgcctacta taactagcta ttttggcttt ctattggctt ccctaatctt CD 51 caccttagcc ctattcattg gttcaagcaa gatacgactt ctttga SQ SEQUENCE 32 AA; MPTITSYFGF LLASLIFTLA LFIGSSKIRL L* // ID AP009381_3 STANDARD; PRT; 509 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : atp1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98398.1 FT PROTEIN_NAME : ATPase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 15475 - 17001 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1527 NT; CD 1 aCgaaattat atcctggagc tgcggaaccc actactatat cgggaagaag CD 51 aatcaccaac tattgcacca atttacaagt tgatgggatc ggtcgagtgg CD 101 tcccagttgg ggatgggatt gcacgtgttt atggatcaaa cgagattcaa CD 151 gctggggaaa tggttgaatt cgccagcggt gtgaaaggaa tagcgttgaa CD 201 tcctgagaat gagaatgtag gtattgttgt atctggtagt gataccgcca CD 251 ttaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gtgggaaagg ccatgttagg tcgtgtggtc gatgcgttgg gagtacctat CD 351 tgatggaaaa ggggctttaa gcgatcacga acgaagacgt gtcgaagtga CD 401 aagcccctgg gattattgaa cgtaaatctg tgcacgaacc tatgcaaaca CD 451 gggttgaaag cagtggatag cccggttcct ataggccgtg gtcaacgaga CD 501 accgataatc ggggaccgac agactggaaa aactgctata gctattgata CD 551 ccatatcgaa ccagaagcga atgaactcaa agggcacctc tgatagtgaa CD 601 aaattgtatc gtgtctatgt agcgattgga cagaaacgct caaccgcggc CD 651 acaattagtt caaattcttt caggagcgga tgcttcggaa tatccaatta CD 701 tcgtagcagc caccgcttcg gatcctgctc ctctgcaatt tctggcccca CD 751 tatcctgggt gtgctgcggg agaatatttc cgcgataatg gaatgcacgc CD 801 atcaataatc tatgatgatc ctagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gctacgccga ccaccaggcc gtgaggcttt cccaggggat CD 901 gttctctatt tacattcccg tccatcagaa agagccgcta aacgatcgga CD 951 ccagacaggt gcgggtagct tgaccgcgtt acccgtcatt gaaacacaag CD 1001 ctggagacgt gtcggcctat atccctacca atgtgatccc cattacagat CD 1051 ggacaaatcc gttcggaaac agagctcttt tatcgcggaa tcagacctgc CD 1101 tattaacgtc ggcttatccg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgag acaagtacgt ggtagttcaa aaccagaatt ggcacaatat CD 1201 cgtgaagtgg ccgcctctgc tcaatccggg tcagaccttg atgctgctac CD 1251 tcaggcacca tcaaatagag gtgctaggct tactgaagtt ccgaaacaac CD 1301 cacaatatcc accacttcct attgaaaaac aaattccagt tattcacgca CD 1351 gctgtgaaag ggtttcgtga tcgaatgcca ctagacagaa ttcctcggta CD 1401 tgagagagcc atttcaagta gtatagatcc cgaattacta caatccgttc CD 1451 cggaaaaagg tgagttaact aacgaaataa ggatgaaacc agatgctcct CD 1501 tcaaaagaaa gcgttaacct ttgctga FT EDITED CDNA CD 1 aTgaaattat atcctggagc tgcggaaccc actactatat cgggaagaag CD 51 aatcaccaac tattgcacca atttacaagt tgatgggatc ggtcgagtgg CD 101 tcccagttgg ggatgggatt gcacgtgttt atggatcaaa cgagattcaa CD 151 gctggggaaa tggttgaatt cgccagcggt gtgaaaggaa tagcgttgaa CD 201 tcctgagaat gagaatgtag gtattgttgt atctggtagt gataccgcca CD 251 ttaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gtgggaaagg ccatgttagg tcgtgtggtc gatgcgttgg gagtacctat CD 351 tgatggaaaa ggggctttaa gcgatcacga acgaagacgt gtcgaagtga CD 401 aagcccctgg gattattgaa cgtaaatctg tgcacgaacc tatgcaaaca CD 451 gggttgaaag cagtggatag cccggttcct ataggccgtg gtcaacgaga CD 501 accgataatc ggggaccgac agactggaaa aactgctata gctattgata CD 551 ccatatcgaa ccagaagcga atgaactcaa agggcacctc tgatagtgaa CD 601 aaattgtatc gtgtctatgt agcgattgga cagaaacgct caaccgcggc CD 651 acaattagtt caaattcttt caggagcgga tgcttcggaa tatccaatta CD 701 tcgtagcagc caccgcttcg gatcctgctc ctctgcaatt tctggcccca CD 751 tatcctgggt gtgctgcggg agaatatttc cgcgataatg gaatgcacgc CD 801 atcaataatc tatgatgatc ctagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gctacgccga ccaccaggcc gtgaggcttt cccaggggat CD 901 gttctctatt tacattcccg tccatcagaa agagccgcta aacgatcgga CD 951 ccagacaggt gcgggtagct tgaccgcgtt acccgtcatt gaaacacaag CD 1001 ctggagacgt gtcggcctat atccctacca atgtgatccc cattacagat CD 1051 ggacaaatcc gttcggaaac agagctcttt tatcgcggaa tcagacctgc CD 1101 tattaacgtc ggcttatccg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgag acaagtacgt ggtagttcaa aaccagaatt ggcacaatat CD 1201 cgtgaagtgg ccgcctctgc tcaatccggg tcagaccttg atgctgctac CD 1251 tcaggcacca tcaaatagag gtgctaggct tactgaagtt ccgaaacaac CD 1301 cacaatatcc accacttcct attgaaaaac aaattccagt tattcacgca CD 1351 gctgtgaaag ggtttcgtga tcgaatgcca ctagacagaa ttcctcggta CD 1401 tgagagagcc atttcaagta gtatagatcc cgaattacta caatccgttc CD 1451 cggaaaaagg tgagttaact aacgaaataa ggatgaaacc agatgctcct CD 1501 tcaaaagaaa gcgttaacct ttgctga SQ SEQUENCE 509 AA; MKLYPGAAEP TTISGRRITN YCTNLQVDGI GRVVPVGDGI ARVYGSNEIQ AGEMVEFASG VKGIALNPEN ENVGIVVSGS DTAIKEGDLV KRTGSIVDVP VGKAMLGRVV DALGVPIDGK GALSDHERRR VEVKAPGIIE RKSVHEPMQT GLKAVDSPVP IGRGQREPII GDRQTGKTAI AIDTISNQKR MNSKGTSDSE KLYRVYVAIG QKRSTAAQLV QILSGADASE YPIIVAATAS DPAPLQFLAP YPGCAAGEYF RDNGMHASII YDDPSKQAVA YRQMSLLLRR PPGREAFPGD VLYLHSRPSE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVIPITD GQIRSETELF YRGIRPAINV GLSVSRVGSA AQLKAMRQVR GSSKPELAQY REVAASAQSG SDLDAATQAP SNRGARLTEV PKQPQYPPLP IEKQIPVIHA AVKGFRDRMP LDRIPRYERA ISSSIDPELL QSVPEKGELT NEIRMKPDAP SKESVNLC* // ID AP009381_4 STANDARD; PRT; 126 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : rps12 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98399.1 FT PROTEIN_NAME : ribosomal protein S12 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 26064 - 26441 FT DIRECTIONS : negative FT EDITING : 126 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 378 NT; CD 1 atgcctacat cgaatcaatc gattcgtcat ggtagagaga aaaaacggcg CD 51 cacagaccgt actcgagctt cggataaatg tcctcagaag caaggagtac CD 101 gcccgcgtgt tccgacggga acaccaaaaa aacctaatcc agctccacgt CD 151 aagatagcca aagtacggtt gagcaatcaa catgatatat ttgcttacat CD 201 tccgggcgaa ggtcataatc tgcaggaaca tcctatggtg tcgatcagag CD 251 gaggtagagt gaaagattcg ccaggtgcga aattccatcg tattcgagga CD 301 gtcaaagatt tgctgggaac tccgggtcga aaaaggggca gatctaaata CD 351 tggtgcgaag agacccaaat cgataCga FT EDITED CDNA CD 1 atgcctacat cgaatcaatc gattcgtcat ggtagagaga aaaaacggcg CD 51 cacagaccgt actcgagctt cggataaatg tcctcagaag caaggagtac CD 101 gcccgcgtgt tccgacggga acaccaaaaa aacctaatcc agctccacgt CD 151 aagatagcca aagtacggtt gagcaatcaa catgatatat ttgcttacat CD 201 tccgggcgaa ggtcataatc tgcaggaaca tcctatggtg tcgatcagag CD 251 gaggtagagt gaaagattcg ccaggtgcga aattccatcg tattcgagga CD 301 gtcaaagatt tgctgggaac tccgggtcga aaaaggggca gatctaaata CD 351 tggtgcgaag agacccaaat cgataTga SQ SEQUENCE 126 AA; MPTSNQSIRH GREKKRRTDR TRASDKCPQK QGVRPRVPTG TPKKPNPAPR KIAKVRLSNQ HDIFAYIPGE GHNLQEHPMV SIRGGRVKDS PGAKFHRIRG VKDLLGTPGR KRGRSKYGAK RPKSI* // ID AP009381_6 STANDARD; PRT; 101 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : nad4L FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98401.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 30110 - 30412 FT DIRECTIONS : negative FT EDITING : 101 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atggatcttg tcaaatattt aacatttcct atgatcattt ctctctcagg CD 51 tattcgggga atcttcctga atagacgaaa tattattatt atgtcaatgt CD 101 caattgaatc aatgttacta gctgccaatt cgaacttttt ggtatttccc CD 151 gtttatccgg atgatatgat gggtcaatta tttgcttcat cggtgttaac CD 201 ggtggcagct gcggaatctg ctattgggtc ggccattccg gttattactt CD 251 tccgaattcg agggaccatt gcagtagaat ctattaattg catgaagggt CD 301 Caa FT EDITED CDNA CD 1 atggatcttg tcaaatattt aacatttcct atgatcattt ctctctcagg CD 51 tattcgggga atcttcctga atagacgaaa tattattatt atgtcaatgt CD 101 caattgaatc aatgttacta gctgccaatt cgaacttttt ggtatttccc CD 151 gtttatccgg atgatatgat gggtcaatta tttgcttcat cggtgttaac CD 201 ggtggcagct gcggaatctg ctattgggtc ggccattccg gttattactt CD 251 tccgaattcg agggaccatt gcagtagaat ctattaattg catgaagggt CD 301 Taa SQ SEQUENCE 101 AA; MDLVKYLTFP MIISLSGIRG IFLNRRNIII MSMSIESMLL AANSNFLVFP VYPDDMMGQL FASSVLTVAA AESAIGSAIP VITFRIRGTI AVESINCMKG * // ID AP009381_7 STANDARD; PRT; 256 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98402.1 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 35699 - 36466 FT DIRECTIONS : negative FT EDITING : 256 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 768 NT; CD 1 atgccaaaca gcccacttga gcaatttgcc attatcccat tgattcctat CD 51 ggatatagga aacttgtatt tctcattcac aaatccatct ttgtccatgc CD 101 cgctaactat cagttcagtc ctgcttttag tccatcttgt tactaagaac CD 151 ggagggggaa actcagtacc aaatgcttgg caatccctgg tagagcttat CD 201 ttatgatttc gtgccgaacc cggtgaacga acaaataggt ggtctttccg CD 251 gaaatgttaa acaaaagttt ccccctcgca tctcggtcac ttttacttct CD 301 tcgttatttc gtaatcccca gggtatgata ccatatagct ccacagttac CD 351 aagtcatttc atcattactt tgggtccccc atttccgatt tctattggaa CD 401 ttactatagt gggatctcaa agaaatgggc ttcatttctc cagctcctca CD 451 tcacccgcag gagtaccact gccgttagca cctttctcag tactccttga CD 501 gctaatccct cattgttctc gcgcatcaag ctcaggaata cgtttatttg CD 551 ctaatatgat ggctggtcat agttcagtaa agatctcaag tgggtccgct CD 601 cggactatgc tatgtatgaa taatataatg tatttcatag gagatcttgg CD 651 tccttcatca atagtttttg caccgaccgg ttcggaatta ggtgtagcta CD 701 tatcacaagc tcatgtttct acaatctcaa tttgtactta ctcgaatgat CD 751 gctacaaatc ctcatCga FT EDITED CDNA CD 1 atgccaaaca gcccacttga gcaatttgcc attatcccat tgattcctat CD 51 ggatatagga aacttgtatt tctcattcac aaatccatct ttgtccatgc CD 101 cgctaactat cagttcagtc ctgcttttag tccatcttgt tactaagaac CD 151 ggagggggaa actcagtacc aaatgcttgg caatccctgg tagagcttat CD 201 ttatgatttc gtgccgaacc cggtgaacga acaaataggt ggtctttccg CD 251 gaaatgttaa acaaaagttt ccccctcgca tctcggtcac ttttacttct CD 301 tcgttatttc gtaatcccca gggtatgata ccatatagct ccacagttac CD 351 aagtcatttc atcattactt tgggtccccc atttccgatt tctattggaa CD 401 ttactatagt gggatctcaa agaaatgggc ttcatttctc cagctcctca CD 451 tcacccgcag gagtaccact gccgttagca cctttctcag tactccttga CD 501 gctaatccct cattgttctc gcgcatcaag ctcaggaata cgtttatttg CD 551 ctaatatgat ggctggtcat agttcagtaa agatctcaag tgggtccgct CD 601 cggactatgc tatgtatgaa taatataatg tatttcatag gagatcttgg CD 651 tccttcatca atagtttttg caccgaccgg ttcggaatta ggtgtagcta CD 701 tatcacaagc tcatgtttct acaatctcaa tttgtactta ctcgaatgat CD 751 gctacaaatc ctcatTga SQ SEQUENCE 256 AA; MPNSPLEQFA IIPLIPMDIG NLYFSFTNPS LSMPLTISSV LLLVHLVTKN GGGNSVPNAW QSLVELIYDF VPNPVNEQIG GLSGNVKQKF PPRISVTFTS SLFRNPQGMI PYSSTVTSHF IITLGPPFPI SIGITIVGSQ RNGLHFSSSS SPAGVPLPLA PFSVLLELIP HCSRASSSGI RLFANMMAGH SSVKISSGSA RTMLCMNNIM YFIGDLGPSS IVFAPTGSEL GVAISQAHVS TISICTYSND ATNPH* // ID AP009381_16 STANDARD; PRT; 524 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : cox1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98411.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 153723 - 155294 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1572 NT; CD 1 aCgacaaatt tggtccgatg gccgttcccc accaaccaca gggatatagg CD 51 gactctatat tcaatctttg gtgccattgc tggagtgatg ggcacatgct CD 101 tctcagtacc aattcgtatg gaattggcac aacccggcga tcaaattctt CD 151 ggtggaaatc atcaacttca taatgtgtta ataacggctc acgcttcttt CD 201 aatgatctct tttatggtca tgccggcgat gataggtgga tttggtaatt CD 251 ggttcgttcc gattcttata ggtgcacctg acatggcatt tccacgatta CD 301 aataatatct cattccggtt gctgccacct tcgctgttgc tcctattaag CD 351 ctcagccctg gtagaagtgg gtagcggcac tgggtggacg gtccatccgc CD 401 ccttaagtgg tattaccagt cattctggag gagctgctga ttcagcaatt CD 451 tctagtcttc atttatcagg tgtttcatcc atttcaggtt ctatcaattc CD 501 tataactact atccccaaca tgcgcggacc tggaatgact atgcatagat CD 551 cacccctatt cgtgcggtcc gttccagtga cagcattcct acttctatta CD 601 tcacttccgg taccggcagg ggcaattacc atgttattga ccgatcgaaa CD 651 ctttaataca accttttctg atcctgctgg agggggagac ccgatattat CD 701 accagcatct ctttcggtcc ttcggtcatc cagaggtgca tattcccatt CD 751 ccgcccggat ccggtatcat tagtcatatc gtatcgactt tttcgggaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgatc agtattggtg CD 851 ttcctggatc tcctgttcgg gctcatcata tgtctactgt gggctcagac CD 901 gttgatacgc gtgctcactc taccgcagct accatgatca tagctgtccc CD 951 cactggaatc aaaatctcta gtcggatcgc taccatgtgg ggaggttcga CD 1001 tacgatacaa aacacccatg ttacctgctg tagggtctat ctcttcgtcc CD 1051 accataggag gacccactgg aatagtcccg gcaaattctg ggctagacat CD 1101 tgctccacat gatacttatt atgtggttgc acattcccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ccatttgcag gatctcactc tcgggcgggt CD 1201 aaaatctctg gtcgaacata ccctgaaact ttaggtcaaa tccatttccg CD 1251 gatcacttct ttcggggtta attcgacctt ctttcccatg catttcttgg CD 1301 ggctttcggg tatgccacgt cgcattccag attatccaga tgcttacgct CD 1351 ggatggaatg cccttagcag tttcggccct tatatatccg tagttgggat CD 1401 tcgtcgtttc ttcgtggtcg taacaatcac tttaagcagt ggaaacaaca CD 1451 aaagatgcgc tccaagtccc tgggctgttg aacataatcc aaccacaccg CD 1501 gaatggatgg tacaaagccc tccagctttt catacttctg aagaacttcc CD 1551 agctgtcaag gagaccttgt ga FT EDITED CDNA CD 1 aTgacaaatt tggtccgatg gccgttcccc accaaccaca gggatatagg CD 51 gactctatat tcaatctttg gtgccattgc tggagtgatg ggcacatgct CD 101 tctcagtacc aattcgtatg gaattggcac aacccggcga tcaaattctt CD 151 ggtggaaatc atcaacttca taatgtgtta ataacggctc acgcttcttt CD 201 aatgatctct tttatggtca tgccggcgat gataggtgga tttggtaatt CD 251 ggttcgttcc gattcttata ggtgcacctg acatggcatt tccacgatta CD 301 aataatatct cattccggtt gctgccacct tcgctgttgc tcctattaag CD 351 ctcagccctg gtagaagtgg gtagcggcac tgggtggacg gtccatccgc CD 401 ccttaagtgg tattaccagt cattctggag gagctgctga ttcagcaatt CD 451 tctagtcttc atttatcagg tgtttcatcc atttcaggtt ctatcaattc CD 501 tataactact atccccaaca tgcgcggacc tggaatgact atgcatagat CD 551 cacccctatt cgtgcggtcc gttccagtga cagcattcct acttctatta CD 601 tcacttccgg taccggcagg ggcaattacc atgttattga ccgatcgaaa CD 651 ctttaataca accttttctg atcctgctgg agggggagac ccgatattat CD 701 accagcatct ctttcggtcc ttcggtcatc cagaggtgca tattcccatt CD 751 ccgcccggat ccggtatcat tagtcatatc gtatcgactt tttcgggaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgatc agtattggtg CD 851 ttcctggatc tcctgttcgg gctcatcata tgtctactgt gggctcagac CD 901 gttgatacgc gtgctcactc taccgcagct accatgatca tagctgtccc CD 951 cactggaatc aaaatctcta gtcggatcgc taccatgtgg ggaggttcga CD 1001 tacgatacaa aacacccatg ttacctgctg tagggtctat ctcttcgtcc CD 1051 accataggag gacccactgg aatagtcccg gcaaattctg ggctagacat CD 1101 tgctccacat gatacttatt atgtggttgc acattcccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ccatttgcag gatctcactc tcgggcgggt CD 1201 aaaatctctg gtcgaacata ccctgaaact ttaggtcaaa tccatttccg CD 1251 gatcacttct ttcggggtta attcgacctt ctttcccatg catttcttgg CD 1301 ggctttcggg tatgccacgt cgcattccag attatccaga tgcttacgct CD 1351 ggatggaatg cccttagcag tttcggccct tatatatccg tagttgggat CD 1401 tcgtcgtttc ttcgtggtcg taacaatcac tttaagcagt ggaaacaaca CD 1451 aaagatgcgc tccaagtccc tgggctgttg aacataatcc aaccacaccg CD 1501 gaatggatgg tacaaagccc tccagctttt catacttctg aagaacttcc CD 1551 agctgtcaag gagaccttgt ga SQ SEQUENCE 524 AA; MTNLVRWPFP TNHRDIGTLY SIFGAIAGVM GTCFSVPIRM ELAQPGDQIL GGNHQLHNVL ITAHASLMIS FMVMPAMIGG FGNWFVPILI GAPDMAFPRL NNISFRLLPP SLLLLLSSAL VEVGSGTGWT VHPPLSGITS HSGGAADSAI SSLHLSGVSS ISGSINSITT IPNMRGPGMT MHRSPLFVRS VPVTAFLLLL SLPVPAGAIT MLLTDRNFNT TFSDPAGGGD PILYQHLFRS FGHPEVHIPI PPGSGIISHI VSTFSGKPVF GYLGMVYAMI SIGVPGSPVR AHHMSTVGSD VDTRAHSTAA TMIIAVPTGI KISSRIATMW GGSIRYKTPM LPAVGSISSS TIGGPTGIVP ANSGLDIAPH DTYYVVAHSH YVLSMGAVFA PFAGSHSRAG KISGRTYPET LGQIHFRITS FGVNSTFFPM HFLGLSGMPR RIPDYPDAYA GWNALSSFGP YISVVGIRRF FVVVTITLSS GNNKRCAPSP WAVEHNPTTP EWMVQSPPAF HTSEELPAVK ETL* // ID AP009381_17 STANDARD; PRT; 105 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : rps10 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98412.1 FT PROTEIN_NAME : ribosomal protein S10 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 82/1 FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 315 NT; CD 1 aCgaccgcca agatacgcat agtgatgaaa tcttttgaag agagattaaa CD 51 caatttaggg gggcttccgc gttacacacg caagattgga tcgcctgaag CD 101 aacgagtctt atatacagtg ttacgatcac ctcatattga taaaaagtcc CD 151 agagaacaat ttgaaatgga gatacataaa caattgctgg tcacagaaac CD 201 agaaacgcat gaatcgcgca aaaagttatt tcggttaaaa cgccagcgtc CD 251 tatttggagc tcaatacgaa atcatctttt actacaaaac ccgttcggat CD 301 aaaggcaaac cctag FT EDITED CDNA CD 1 aTgaccgcca agatacgcat agtgatgaaa tcttttgaag agagattaaa CD 51 caatttaggg gggcttccgc gttacacacg caagattgga tcgcctgaag CD 101 aacgagtctt atatacagtg ttacgatcac ctcatattga taaaaagtcc CD 151 agagaacaat ttgaaatgga gatacataaa caattgctgg tcacagaaac CD 201 agaaacgcat gaatcgcgca aaaagttatt tcggttaaaa cgccagcgtc CD 251 tatttggagc tcaatacgaa atcatctttt actacaaaac ccgttcggat CD 301 aaaggcaaac cctag SQ SEQUENCE 105 AA; MTAKIRIVMK SFEERLNNLG GLPRYTRKIG SPEERVLYTV LRSPHIDKKS REQFEMEIHK QLLVTETETH ESRKKLFRLK RQRLFGAQYE IIFYYKTRSD KGKP* // ID AP009381_18 STANDARD; PRT; 496 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : nad4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98413.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 154/2 FT INTRON 326/1 FT INTRON 467/1 FT EDITING : 496 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1488 NT; CD 1 atgtcacaac aatttcgtga atgctattcc aatctaagtg gtcctattcc CD 51 gtgtcccgtg ctaggaagca ttattcctct tttccttcca aattcgagaa CD 101 tgcgactgat acgatctatt ggtctgtgcg cctctcttct tactttttcg CD 151 tacccccctg ttcctcggat acaattcgat tcttctacgg ccaaatccca CD 201 atttgtggaa accattcgat ggcttcctta tggaagcatc aatttgtata CD 251 tgggtataga tggtatccct tcatcctccg tgatattgac cacattttca CD 301 atccctattc gcattttagt aggttggtcc agtatgaaaa gttatgggaa CD 351 ggagtatatt atagcatttc caattcgtga atttccaatg atcgccgtgt CD 401 ttcgcatgcc ggatccttta ctatttcatg ttcttcccga aagcgtgcta CD 451 atccctatgt ttattattat aggggtatgg ggttcgagac aaagaaagat CD 501 caaggcagca catcagtttc tcccatatac ctcactcgga tctgttctta CD 551 tgctactagc tattccgttt attttctccc aaacaggaac caccgattca CD 601 caaatcttat taaccacaga attcagtgag cggcgccaaa tctttccatg CD 651 gattgcttct tccgctcctt tccccgtaaa agtgcctatg gtaccagttc CD 701 atatctggtc acccgaagct catgtagagg cacctacggc tggatccgtc CD 751 atctcggcag gaattccttc gaaattggga acctatgggt ttttgagatt CD 801 ttccataccc atgtttcccg aagcgacgct ttgtctcact ccttccattt CD 851 atactctaag cgcgatcgct actatatata cttccccgac cactccgaga CD 901 caaatcgatc ctaagaagat cattgcctac tccccagtag cccatacgaa CD 951 tttcgtgact attggtatgt ccagtccgaa catacaggga attggaggta CD 1001 gcattccacc gatgtcaagt catggaccgg ttccttcagc cccttttcca CD 1051 tgtgttggtg ttccatatga ccgacataag actcgacctg ctaaatatta CD 1101 tggaggttca gtaagcacca tgccaaatcc ctctaccatt ttcttctttt CD 1151 ccactttagc caatatgggt ttacctggta ctagcagctc tatcggggaa CD 1201 tttcccatct tagtaggagc tttccaaaga aatggcttag tagccacatc CD 1251 agcagcgctt gggatgattt caggcgcagc gtatccccct tggccatata CD 1301 atcgtgcggt tcttggaaat tcaaaaccca atttccccca taaatcctcc CD 1351 gatccaaatg gaagagaagt tccgatatct ccacctctta ctgttggagt CD 1401 tgttcggatg ggtgttcacc ccaaggtgtt cccggaccgt atgcataccc CD 1451 ccgtaagtaa ctcagtgcaa catggcaaat tccatCga FT EDITED CDNA CD 1 atgtcacaac aatttcgtga atgctattcc aatctaagtg gtcctattcc CD 51 gtgtcccgtg ctaggaagca ttattcctct tttccttcca aattcgagaa CD 101 tgcgactgat acgatctatt ggtctgtgcg cctctcttct tactttttcg CD 151 tacccccctg ttcctcggat acaattcgat tcttctacgg ccaaatccca CD 201 atttgtggaa accattcgat ggcttcctta tggaagcatc aatttgtata CD 251 tgggtataga tggtatccct tcatcctccg tgatattgac cacattttca CD 301 atccctattc gcattttagt aggttggtcc agtatgaaaa gttatgggaa CD 351 ggagtatatt atagcatttc caattcgtga atttccaatg atcgccgtgt CD 401 ttcgcatgcc ggatccttta ctatttcatg ttcttcccga aagcgtgcta CD 451 atccctatgt ttattattat aggggtatgg ggttcgagac aaagaaagat CD 501 caaggcagca catcagtttc tcccatatac ctcactcgga tctgttctta CD 551 tgctactagc tattccgttt attttctccc aaacaggaac caccgattca CD 601 caaatcttat taaccacaga attcagtgag cggcgccaaa tctttccatg CD 651 gattgcttct tccgctcctt tccccgtaaa agtgcctatg gtaccagttc CD 701 atatctggtc acccgaagct catgtagagg cacctacggc tggatccgtc CD 751 atctcggcag gaattccttc gaaattggga acctatgggt ttttgagatt CD 801 ttccataccc atgtttcccg aagcgacgct ttgtctcact ccttccattt CD 851 atactctaag cgcgatcgct actatatata cttccccgac cactccgaga CD 901 caaatcgatc ctaagaagat cattgcctac tccccagtag cccatacgaa CD 951 tttcgtgact attggtatgt ccagtccgaa catacaggga attggaggta CD 1001 gcattccacc gatgtcaagt catggaccgg ttccttcagc cccttttcca CD 1051 tgtgttggtg ttccatatga ccgacataag actcgacctg ctaaatatta CD 1101 tggaggttca gtaagcacca tgccaaatcc ctctaccatt ttcttctttt CD 1151 ccactttagc caatatgggt ttacctggta ctagcagctc tatcggggaa CD 1201 tttcccatct tagtaggagc tttccaaaga aatggcttag tagccacatc CD 1251 agcagcgctt gggatgattt caggcgcagc gtatccccct tggccatata CD 1301 atcgtgcggt tcttggaaat tcaaaaccca atttccccca taaatcctcc CD 1351 gatccaaatg gaagagaagt tccgatatct ccacctctta ctgttggagt CD 1401 tgttcggatg ggtgttcacc ccaaggtgtt cccggaccgt atgcataccc CD 1451 ccgtaagtaa ctcagtgcaa catggcaaat tccatTga SQ SEQUENCE 496 AA; MSQQFRECYS NLSGPIPCPV LGSIIPLFLP NSRMRLIRSI GLCASLLTFS YPPVPRIQFD SSTAKSQFVE TIRWLPYGSI NLYMGIDGIP SSSVILTTFS IPIRILVGWS SMKSYGKEYI IAFPIREFPM IAVFRMPDPL LFHVLPESVL IPMFIIIGVW GSRQRKIKAA HQFLPYTSLG SVLMLLAIPF IFSQTGTTDS QILLTTEFSE RRQIFPWIAS SAPFPVKVPM VPVHIWSPEA HVEAPTAGSV ISAGIPSKLG TYGFLRFSIP MFPEATLCLT PSIYTLSAIA TIYTSPTTPR QIDPKKIIAY SPVAHTNFVT IGMSSPNIQG IGGSIPPMSS HGPVPSAPFP CVGVPYDRHK TRPAKYYGGS VSTMPNPSTI FFFSTLANMG LPGTSSSIGE FPILVGAFQR NGLVATSAAL GMISGAAYPP WPYNRAVLGN SKPNFPHKSS DPNGREVPIS PPLTVGVVRM GVHPKVFPDR MHTPVSNSVQ HGKFH* // ID AP009381_21 STANDARD; PRT; 478 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : rpl2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98416.1 FT PROTEIN_NAME : ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 249/2 FT EDITING : 478 Q(Cag) -> *(Tag) FT CODON_START : 1 CL CDNALEN 1434 NT; CD 1 atgagaaaga gttgcctact attttctaaa gcacttagac aattcacttt CD 51 tggtacagag aagtccgctg ggagaaatcc atcggggcgt actacggttt CD 101 ttcaccgagg gggtggatcg aagcgattgc agcgaagaat tgattcgaaa CD 151 cgaagcactt cgtctatggg cattgtagaa aggatcgaat atgacccaaa CD 201 tcgttcctct cggattgctc tagtacgatg gatcgaaggg gtgctgctac CD 251 gccgccagag gaggacttgc tgcaacacga gagaagagtt cgctccgccg CD 301 cgtgagatcc tcgaacctac tacggccacc atcggcggcc tattctcgtt CD 351 ctcctccctg cccgggaaag tggatgagat aaaggacgtt ctcttatctg CD 401 ccccctcctc tccaagggcc aagagagagg ctgcaacttc cccttcctcc CD 451 ggtagctctt tgggtttacc aaggatagcg gtagctgggg caaagcccgc CD 501 tttattcgct ccgcgaatga gagaagaact cagaggaaaa aagacgttct CD 551 ctctctgcga ggtccgaagg tggagaacgc atagcgttct ctgggcgcat CD 601 aggatcaaac gtaaagcagc gctttcttgg cagagttatt ggcggcaaga CD 651 gactttaggg cttgctgaag ctgctgagca taacggatca aggccgaagg CD 701 cggatcaagc gagggatgga gcgtgcaaag tcgatcgtgc acctgtcact CD 751 tatatatcag ctggtcatca atcgggagca ggcaagatgg tgatgaattg CD 801 cgattggtcc aaaccttcga cctcgttcaa cggcggcggc taccatcaac CD 851 ctgcccatgc cccaaacctt cggttccaag accttgttcg cacagcgaat CD 901 gaaggccggg tggaagggcg ggggggcagt cagcaggctg cttcttggcc CD 951 acgcccccag tacgccgctt atagatgcga catactcgat ccgtattctc CD 1001 aagtaggaga ttgcatacca tcagccaata tacgtacagg aacatgggca CD 1051 cataatactg aatgtgatcc aggtcaaggc gcaaagccga ctcgagctgc CD 1101 aggaaccttt gctgaaataa tgaagaaacc tgggaatgca ccacaatgtc CD 1151 ttgtgcggtc acctccgggt gttgaaaaac tcatagatcc ccgatgccga CD 1201 gccactattg gtatagttcc caatcccaac catggtgcac gtaagcttgg CD 1251 aagagcagga caaagccggt ggttaggcag acgccccatt gctcggggtg CD 1301 ttgctatgaa tccagtggat catcctcatg gaggaggtga aggacgcacg CD 1351 aaaggaggta gaccttcggt gtcaccttgg ggagagccca ccaaagctgg CD 1401 atctcgaaca gtagtgggga aacgcagaaa tCag FT EDITED CDNA CD 1 atgagaaaga gttgcctact attttctaaa gcacttagac aattcacttt CD 51 tggtacagag aagtccgctg ggagaaatcc atcggggcgt actacggttt CD 101 ttcaccgagg gggtggatcg aagcgattgc agcgaagaat tgattcgaaa CD 151 cgaagcactt cgtctatggg cattgtagaa aggatcgaat atgacccaaa CD 201 tcgttcctct cggattgctc tagtacgatg gatcgaaggg gtgctgctac CD 251 gccgccagag gaggacttgc tgcaacacga gagaagagtt cgctccgccg CD 301 cgtgagatcc tcgaacctac tacggccacc atcggcggcc tattctcgtt CD 351 ctcctccctg cccgggaaag tggatgagat aaaggacgtt ctcttatctg CD 401 ccccctcctc tccaagggcc aagagagagg ctgcaacttc cccttcctcc CD 451 ggtagctctt tgggtttacc aaggatagcg gtagctgggg caaagcccgc CD 501 tttattcgct ccgcgaatga gagaagaact cagaggaaaa aagacgttct CD 551 ctctctgcga ggtccgaagg tggagaacgc atagcgttct ctgggcgcat CD 601 aggatcaaac gtaaagcagc gctttcttgg cagagttatt ggcggcaaga CD 651 gactttaggg cttgctgaag ctgctgagca taacggatca aggccgaagg CD 701 cggatcaagc gagggatgga gcgtgcaaag tcgatcgtgc acctgtcact CD 751 tatatatcag ctggtcatca atcgggagca ggcaagatgg tgatgaattg CD 801 cgattggtcc aaaccttcga cctcgttcaa cggcggcggc taccatcaac CD 851 ctgcccatgc cccaaacctt cggttccaag accttgttcg cacagcgaat CD 901 gaaggccggg tggaagggcg ggggggcagt cagcaggctg cttcttggcc CD 951 acgcccccag tacgccgctt atagatgcga catactcgat ccgtattctc CD 1001 aagtaggaga ttgcatacca tcagccaata tacgtacagg aacatgggca CD 1051 cataatactg aatgtgatcc aggtcaaggc gcaaagccga ctcgagctgc CD 1101 aggaaccttt gctgaaataa tgaagaaacc tgggaatgca ccacaatgtc CD 1151 ttgtgcggtc acctccgggt gttgaaaaac tcatagatcc ccgatgccga CD 1201 gccactattg gtatagttcc caatcccaac catggtgcac gtaagcttgg CD 1251 aagagcagga caaagccggt ggttaggcag acgccccatt gctcggggtg CD 1301 ttgctatgaa tccagtggat catcctcatg gaggaggtga aggacgcacg CD 1351 aaaggaggta gaccttcggt gtcaccttgg ggagagccca ccaaagctgg CD 1401 atctcgaaca gtagtgggga aacgcagaaa tTag SQ SEQUENCE 478 AA; MRKSCLLFSK ALRQFTFGTE KSAGRNPSGR TTVFHRGGGS KRLQRRIDSK RSTSSMGIVE RIEYDPNRSS RIALVRWIEG VLLRRQRRTC CNTREEFAPP REILEPTTAT IGGLFSFSSL PGKVDEIKDV LLSAPSSPRA KREAATSPSS GSSLGLPRIA VAGAKPALFA PRMREELRGK KTFSLCEVRR WRTHSVLWAH RIKRKAALSW QSYWRQETLG LAEAAEHNGS RPKADQARDG ACKVDRAPVT YISAGHQSGA GKMVMNCDWS KPSTSFNGGG YHQPAHAPNL RFQDLVRTAN EGRVEGRGGS QQAASWPRPQ YAAYRCDILD PYSQVGDCIP SANIRTGTWA HNTECDPGQG AKPTRAAGTF AEIMKKPGNA PQCLVRSPPG VEKLIDPRCR ATIGIVPNPN HGARKLGRAG QSRWLGRRPI ARGVAMNPVD HPHGGGEGRT KGGRPSVSPW GEPTKAGSRT VVGKRRN* // ID AP009381_26 STANDARD; PRT; 202 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : nad6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98420.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 225214 - 225819 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 202 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 606 NT; CD 1 aCgatacttt ctgtttcgtc gagccctgct ttggtccctg gtttgatggt CD 51 tgtacgtgct gaaaatccag tacatcccgt ttcgttcccc atcccagtgt CD 101 ttcgcaacac ttcaggttta cttattttgt caggtcctga cctctctgct CD 151 atgatctccc cagtagttca tataggagct attgccgttc tattctcatc CD 201 cgtggttatg atgttaaata ttcaaatagc agagattcac gaaaaagtat CD 251 cgcgctattc accagtgagt ggtcttattg gaccgatcct tcggtgggaa CD 301 atgttcctca tcctagataa tgatcacatt ccatcattac cgacctacat CD 351 aggtacaacc tctctgagat atacagttca tgctggagag atacaaagtt CD 401 ggactaattc ggaaacattg ggcaatttac ttcataccta ctattccgtt CD 451 cggttcctgg tttctagtcc tgttccatta gtagccatga ttggggctat CD 501 agtactgact atgcatagga ctactaaggt gaagagacag gatgtattcc CD 551 gacgaaatgc tattgattct aggaggacca taatgaggag gacgacggac CD 601 caaCaa FT EDITED CDNA CD 1 aTgatacttt ctgtttcgtc gagccctgct ttggtccctg gtttgatggt CD 51 tgtacgtgct gaaaatccag tacatcccgt ttcgttcccc atcccagtgt CD 101 ttcgcaacac ttcaggttta cttattttgt caggtcctga cctctctgct CD 151 atgatctccc cagtagttca tataggagct attgccgttc tattctcatc CD 201 cgtggttatg atgttaaata ttcaaatagc agagattcac gaaaaagtat CD 251 cgcgctattc accagtgagt ggtcttattg gaccgatcct tcggtgggaa CD 301 atgttcctca tcctagataa tgatcacatt ccatcattac cgacctacat CD 351 aggtacaacc tctctgagat atacagttca tgctggagag atacaaagtt CD 401 ggactaattc ggaaacattg ggcaatttac ttcataccta ctattccgtt CD 451 cggttcctgg tttctagtcc tgttccatta gtagccatga ttggggctat CD 501 agtactgact atgcatagga ctactaaggt gaagagacag gatgtattcc CD 551 gacgaaatgc tattgattct aggaggacca taatgaggag gacgacggac CD 601 caaTaa SQ SEQUENCE 202 AA; MILSVSSSPA LVPGLMVVRA ENPVHPVSFP IPVFRNTSGL LILSGPDLSA MISPVVHIGA IAVLFSSVVM MLNIQIAEIH EKVSRYSPVS GLIGPILRWE MFLILDNDHI PSLPTYIGTT SLRYTVHAGE IQSWTNSETL GNLLHTYYSV RFLVSSPVPL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDS RRTIMRRTTD Q* // ID AP009381_27 STANDARD; PRT; 194 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : rps11 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98421.1 FT PROTEIN_NAME : ribosomal protein S11 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 226408 - 226989 FT DIRECTIONS : negative FT EDITING : 194 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 582 NT; CD 1 atgagtggga gcgctacgaa gagcgaaaag agttgtttat caacacttct CD 51 aattaatatg atgattcaac cccttaaaga gcacttggaa aaaacgacgg CD 101 ccgagcagga tcacgtagag caacaagtta ttgcggacag gagtttaaaa CD 151 tccatgaact ttgtacaaag cgtcccggag gaatatgagc gatcggagcg CD 201 gcaaagagat agggagaaaa acaaagattt cgtccattcc ccactgatcc CD 251 acaataatac ctctgttacc gtgacggatg ataaggggaa taaaaaaact CD 301 ggggcccccg caggtcgttt ggaggagatt caaggggggt ctcgtcgctc CD 351 aaccaagtat gctgctgaag caactgcaga acatgtcggg cgatccgcca CD 401 aaaatctagg gatgaagtcg gttgtagtgg aagcgaaagg atctacttat CD 451 tccgggaaaa agaaagcagt gatcccgagc cctcgaaaag gagtaggaag CD 501 aaaatctcta attatgcaca ttcacgatgt aacccaactt tcacataatg CD 551 gatgccgact ccccaggaaa cgtcgtgttC aa FT EDITED CDNA CD 1 atgagtggga gcgctacgaa gagcgaaaag agttgtttat caacacttct CD 51 aattaatatg atgattcaac cccttaaaga gcacttggaa aaaacgacgg CD 101 ccgagcagga tcacgtagag caacaagtta ttgcggacag gagtttaaaa CD 151 tccatgaact ttgtacaaag cgtcccggag gaatatgagc gatcggagcg CD 201 gcaaagagat agggagaaaa acaaagattt cgtccattcc ccactgatcc CD 251 acaataatac ctctgttacc gtgacggatg ataaggggaa taaaaaaact CD 301 ggggcccccg caggtcgttt ggaggagatt caaggggggt ctcgtcgctc CD 351 aaccaagtat gctgctgaag caactgcaga acatgtcggg cgatccgcca CD 401 aaaatctagg gatgaagtcg gttgtagtgg aagcgaaagg atctacttat CD 451 tccgggaaaa agaaagcagt gatcccgagc cctcgaaaag gagtaggaag CD 501 aaaatctcta attatgcaca ttcacgatgt aacccaactt tcacataatg CD 551 gatgccgact ccccaggaaa cgtcgtgttT aa SQ SEQUENCE 194 AA; MSGSATKSEK SCLSTLLINM MIQPLKEHLE KTTAEQDHVE QQVIADRSLK SMNFVQSVPE EYERSERQRD REKNKDFVHS PLIHNNTSVT VTDDKGNKKT GAPAGRLEEI QGGSRRSTKY AAEATAEHVG RSAKNLGMKS VVVEAKGSTY SGKKKAVIPS PRKGVGRKSL IMHIHDVTQL SHNGCRLPRK RRV* // ID AP009381_28 STANDARD; PRT; 134 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : sdh3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98422.1 FT PROTEIN_NAME : succinate dehydrogenase cytochrome subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 240289 - 240690 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 402 NT; CD 1 aCgaacatca atcgaccgtt accacctcat cctactattc ataagccaca CD 51 gcttactccg acgtttccaa ttccccatag aatacccggg gccttcttag CD 101 ccactatggt tttgttcagt cctccttttc gtccggaaat aggtcttatt CD 151 agctccactt atgggaatct ttaccaatct tctttttccg tcaatttccc CD 201 gaagttcatt ctaggcttag tcaatcctac tccattagcg ccgcgctatc CD 251 atatgagtaa tggagttcgt catttacggt gggatttggg tttttctcca CD 301 gaattctctc caataattcg gatttccgaa tttcccgcgt tatgtgtagc CD 351 ttttccagct ctcggaaaga ttatccgaag aatctattgt cgatcgcgct CD 401 ag FT EDITED CDNA CD 1 aTgaacatca atcgaccgtt accacctcat cctactattc ataagccaca CD 51 gcttactccg acgtttccaa ttccccatag aatacccggg gccttcttag CD 101 ccactatggt tttgttcagt cctccttttc gtccggaaat aggtcttatt CD 151 agctccactt atgggaatct ttaccaatct tctttttccg tcaatttccc CD 201 gaagttcatt ctaggcttag tcaatcctac tccattagcg ccgcgctatc CD 251 atatgagtaa tggagttcgt catttacggt gggatttggg tttttctcca CD 301 gaattctctc caataattcg gatttccgaa tttcccgcgt tatgtgtagc CD 351 ttttccagct ctcggaaaga ttatccgaag aatctattgt cgatcgcgct CD 401 ag SQ SEQUENCE 134 AA; MNINRPLPPH PTIHKPQLTP TFPIPHRIPG AFLATMVLFS PPFRPEIGLI SSTYGNLYQS SFSVNFPKFI LGLVNPTPLA PRYHMSNGVR HLRWDLGFSP EFSPIIRISE FPALCVAFPA LGKIIRRIYC RSR* // ID AP009381_29 STANDARD; PRT; 464 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : ccmFC FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98423.1 FT PROTEIN_NAME : cytochrome c biogenesis FC FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 273/2 FT EDITING : 464 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1392 NT; CD 1 atggtccaac cacagaactt cttctttttc attactttca tggtcgtgcc CD 51 tcgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccacagg tgctccttct cccagtggta ctctaattcc tattcctata CD 151 tcttcattac cttttctagt ccatctgcat tccagggaat tcatacgctc CD 201 tatggacgaa gcgaaaagta tagtgctggt tggagcaagc cgccctatcc CD 251 tattaccaga cataattggg agaagctcac ccggaactgg agctagaaac CD 301 gcatcattct gtttcgttct cgttcttcat cttattcttc tcggattcgt CD 351 gggagacttg tcatattcag aatctttccg cggtgtgctc cgtttactat CD 401 tatttcgtac ccttttccta ccatataatc atgggcgcga taggttagcg CD 451 aacaaagggc gtgagcgggc gcggagaaga aaacgccaaa cgcttcggcc CD 501 taacgggaat gagcaacgac gaaatgacaa gataaggtgc cccgggagct CD 551 cgtgcccccc cccacccccc catttagaaa gaaggggcga aggttttggg CD 601 cctgtagctt cccccgtccc cccttcgtcg ggtggtgctt gtgggggggg CD 651 tgtgccaccc gaggcagaga ttgggtacta tcttgaagcg cgttctctcg CD 701 ccttaccaac gagtcgactg ctgatggctg ttggtcacga ctgctaccga CD 751 aaagctccaa tgaatatgaa tatttcacat ggaggagtgt gcatctttat CD 801 tatgggtgtt attttgtctg acacgaaaaa gatacagttt actcaacgat CD 851 tgcctttggg tcccgaactc catatgggga aggagcgttg ttgtttgcga CD 901 ggttctgatc attcacatgg acccactttt cattccattt gtggtaattc CD 951 gatgatctat aaaccgtccc taacgaaccc attcatgctt gagcatgatg CD 1001 aatcacttcg tgccataatc gacctgttgc caatccactt ttcggcctca CD 1051 tatgggaatg gaaaactgga tcattttctg catcgtgaaa gatcgtggtg CD 1101 gatagagaat cgcgaacata ataattcctg gttgaccatg tccccagaaa CD 1151 aaagatactt tttctccatt caggaaacga cgagcgcgac tgaagttgct CD 1201 atacatacaa atctatttac ggatccatat gctccgattg gaactggaag CD 1251 tttcggaaca ggcggctggt ataccaccat aatggaactg cctcttattt CD 1301 ttcgcattcg gataggattt ctgttggctt cgccgggggg cttgcgtagt CD 1351 ttgttacgtc agctccaaaa ggataagttg cattggaatC ga FT EDITED CDNA CD 1 atggtccaac cacagaactt cttctttttc attactttca tggtcgtgcc CD 51 tcgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccacagg tgctccttct cccagtggta ctctaattcc tattcctata CD 151 tcttcattac cttttctagt ccatctgcat tccagggaat tcatacgctc CD 201 tatggacgaa gcgaaaagta tagtgctggt tggagcaagc cgccctatcc CD 251 tattaccaga cataattggg agaagctcac ccggaactgg agctagaaac CD 301 gcatcattct gtttcgttct cgttcttcat cttattcttc tcggattcgt CD 351 gggagacttg tcatattcag aatctttccg cggtgtgctc cgtttactat CD 401 tatttcgtac ccttttccta ccatataatc atgggcgcga taggttagcg CD 451 aacaaagggc gtgagcgggc gcggagaaga aaacgccaaa cgcttcggcc CD 501 taacgggaat gagcaacgac gaaatgacaa gataaggtgc cccgggagct CD 551 cgtgcccccc cccacccccc catttagaaa gaaggggcga aggttttggg CD 601 cctgtagctt cccccgtccc cccttcgtcg ggtggtgctt gtgggggggg CD 651 tgtgccaccc gaggcagaga ttgggtacta tcttgaagcg cgttctctcg CD 701 ccttaccaac gagtcgactg ctgatggctg ttggtcacga ctgctaccga CD 751 aaagctccaa tgaatatgaa tatttcacat ggaggagtgt gcatctttat CD 801 tatgggtgtt attttgtctg acacgaaaaa gatacagttt actcaacgat CD 851 tgcctttggg tcccgaactc catatgggga aggagcgttg ttgtttgcga CD 901 ggttctgatc attcacatgg acccactttt cattccattt gtggtaattc CD 951 gatgatctat aaaccgtccc taacgaaccc attcatgctt gagcatgatg CD 1001 aatcacttcg tgccataatc gacctgttgc caatccactt ttcggcctca CD 1051 tatgggaatg gaaaactgga tcattttctg catcgtgaaa gatcgtggtg CD 1101 gatagagaat cgcgaacata ataattcctg gttgaccatg tccccagaaa CD 1151 aaagatactt tttctccatt caggaaacga cgagcgcgac tgaagttgct CD 1201 atacatacaa atctatttac ggatccatat gctccgattg gaactggaag CD 1251 tttcggaaca ggcggctggt ataccaccat aatggaactg cctcttattt CD 1301 ttcgcattcg gataggattt ctgttggctt cgccgggggg cttgcgtagt CD 1351 ttgttacgtc agctccaaaa ggataagttg cattggaatT ga SQ SEQUENCE 464 AA; MVQPQNFFFF ITFMVVPRGT AAPVLLKWFV SRDVPTGAPS PSGTLIPIPI SSLPFLVHLH SREFIRSMDE AKSIVLVGAS RPILLPDIIG RSSPGTGARN ASFCFVLVLH LILLGFVGDL SYSESFRGVL RLLLFRTLFL PYNHGRDRLA NKGRERARRR KRQTLRPNGN EQRRNDKIRC PGSSCPPPPP HLERRGEGFG PVASPVPPSS GGACGGGVPP EAEIGYYLEA RSLALPTSRL LMAVGHDCYR KAPMNMNISH GGVCIFIMGV ILSDTKKIQF TQRLPLGPEL HMGKERCCLR GSDHSHGPTF HSICGNSMIY KPSLTNPFML EHDESLRAII DLLPIHFSAS YGNGKLDHFL HRERSWWIEN REHNNSWLTM SPEKRYFFSI QETTSATEVA IHTNLFTDPY APIGTGSFGT GGWYTTIMEL PLIFRIRIGF LLASPGGLRS LLRQLQKDKL HWN* // ID AP009381_31 STANDARD; PRT; 326 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98425.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 129/1 FT INTRON 157/0 FT INTRON 221/0 FT INTRON 240/2 FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 978 NT; CD 1 aCgtacattg ctatttcagc tgaaatacct ggaataatca taccacttcc CD 51 actaggagta gcctttttag tgctggctga acgtaaagta atggctcctg CD 101 tgcaacgtcg aaagggtcct gatgtagttg gatcgttcgg attgttacaa CD 151 cctttagcgg atggttcgaa attggttctg aaagaaccta tttcaccaag CD 201 tagtgctaat ttatttcttt ccagaatggc tccagtggtt acatctatgt CD 251 caagttcggt tgctcgggcc gttgtacctt ttgattatgg tatggtatcg CD 301 ccagattcgg acataggtat acttcatctg tttgccatat cttcgctagg CD 351 tgttcatggg attattacag cgggttggtc tagtaatccg aaatatgctt CD 401 ttccaggagc attacgatct gcagctcaaa tggtctctta cgaagcatct CD 451 attggtccta ttattattac cgtaccaata tgtgtaggtc ctcgtaattt CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtttggt attcccttgt CD 551 tccccgtatt ggttatgttt cttatccctc gtccagcaga aactaatcga CD 601 gctccttctg atctcccaga agcggaagct gaatcagttg cgggctataa CD 651 tgcggaatat tcttcaatgg ggtctgctcc tttctcccca ggggagtatg CD 701 ccaatatgat cttaatgagt agtccatgta cattgctctc tccaggaggt CD 751 cggccgccta tcccagatct tcccatttcc aagaagatcc cgggctcgat CD 801 ctggtttagt atcaaggtga ttttcttccc gtttctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aatcaatggg acctggccgg CD 901 aaagtcttct tgcctctatc actagcttgg gtagtctccg tttctggtgt CD 951 tccagtcacc tttcaatggc tcccttaa FT EDITED CDNA CD 1 aTgtacattg ctatttcagc tgaaatacct ggaataatca taccacttcc CD 51 actaggagta gcctttttag tgctggctga acgtaaagta atggctcctg CD 101 tgcaacgtcg aaagggtcct gatgtagttg gatcgttcgg attgttacaa CD 151 cctttagcgg atggttcgaa attggttctg aaagaaccta tttcaccaag CD 201 tagtgctaat ttatttcttt ccagaatggc tccagtggtt acatctatgt CD 251 caagttcggt tgctcgggcc gttgtacctt ttgattatgg tatggtatcg CD 301 ccagattcgg acataggtat acttcatctg tttgccatat cttcgctagg CD 351 tgttcatggg attattacag cgggttggtc tagtaatccg aaatatgctt CD 401 ttccaggagc attacgatct gcagctcaaa tggtctctta cgaagcatct CD 451 attggtccta ttattattac cgtaccaata tgtgtaggtc ctcgtaattt CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtttggt attcccttgt CD 551 tccccgtatt ggttatgttt cttatccctc gtccagcaga aactaatcga CD 601 gctccttctg atctcccaga agcggaagct gaatcagttg cgggctataa CD 651 tgcggaatat tcttcaatgg ggtctgctcc tttctcccca ggggagtatg CD 701 ccaatatgat cttaatgagt agtccatgta cattgctctc tccaggaggt CD 751 cggccgccta tcccagatct tcccatttcc aagaagatcc cgggctcgat CD 801 ctggtttagt atcaaggtga ttttcttccc gtttctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aatcaatggg acctggccgg CD 901 aaagtcttct tgcctctatc actagcttgg gtagtctccg tttctggtgt CD 951 tccagtcacc tttcaatggc tcccttaa SQ SEQUENCE 326 AA; MYIAISAEIP GIIIPLPLGV AFLVLAERKV MAPVQRRKGP DVVGSFGLLQ PLADGSKLVL KEPISPSSAN LFLSRMAPVV TSMSSSVARA VVPFDYGMVS PDSDIGILHL FAISSLGVHG IITAGWSSNP KYAFPGALRS AAQMVSYEAS IGPIIITVPI CVGPRNLSEI VMAQKQIWFG IPLFPVLVMF LIPRPAETNR APSDLPEAEA ESVAGYNAEY SSMGSAPFSP GEYANMILMS SPCTLLSPGG RPPIPDLPIS KKIPGSIWFS IKVIFFPFLY IWVRAAFPRY RYDQSMGPGR KVFLPLSLAW VVSVSGVPVT FQWLP* // ID AP009381_32 STANDARD; PRT; 75 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : atp9 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98426.1 FT PROTEIN_NAME : ATPase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 307142 - 307366 FT DIRECTIONS : negative FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgtcggaag gtgcaaaatt aataggtgcc ggagcagcta caattgcttc CD 51 agcgggagct gctgtcggta ttggaaacgt ccttagttcc tcgatccatc CD 101 ccgtggcgcg aaatccatca ttggctaaac aatcatttgg tcatgccatt CD 151 tcggggtttg ctttaaccga agctattgca ttgtttgcct caatgatggc CD 201 gtttttgatc tcatccgtat tcCga FT EDITED CDNA CD 1 atgtcggaag gtgcaaaatt aataggtgcc ggagcagcta caattgcttc CD 51 agcgggagct gctgtcggta ttggaaacgt ccttagttcc tcgatccatc CD 101 ccgtggcgcg aaatccatca ttggctaaac aatcatttgg tcatgccatt CD 151 tcggggtttg ctttaaccga agctattgca ttgtttgcct caatgatggc CD 201 gtttttgatc tcatccgtat tcTga SQ SEQUENCE 75 AA; MSEGAKLIGA GAATIASAGA AVGIGNVLSS SIHPVARNPS LAKQSFGHAI SGFALTEAIA LFASMMAFLI SSVF* // ID AP009381_33 STANDARD; PRT; 198 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : atp4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98427.1 FT PROTEIN_NAME : ATPase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 309093 - 309686 FT DIRECTIONS : negative FT EDITING : 198 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 594 NT; CD 1 atgatattta gttccacgaa taggaaggag agaaatatgc tatttgctgc CD 51 tattctattt attcgtgtat taagctcgaa gaagatctca atatataatg CD 101 aagaaatgat agtagcttgt cgttttatag gctttatcat atccagtcag CD 151 aagagttcgg gtaatactct caaagcgatt ttcgacggga gaatcggagc CD 201 tattcagaaa gaattgcagc aattccccaa tcccaacgaa gttgtttctc CD 251 cggaatccaa tgaacaacaa caattactta ggatcagctt gcgttcaatt CD 301 acgccagaga ttgtagaatc attaccaaat gagacggcac gctgtgcgcc CD 351 taagtgcgaa aagacagtgc aagctgtgtt atgccgaaac ctaaatgtaa CD 401 agttagcaac acttccaaat gccatttatt cccgtcgcat ccgtcttcgg CD 451 gacgatatag tcacaggttt tcacttctca gtgagtgaaa aatttgtccc CD 501 ctgcaccacc gatacgaaaa aagcttttat cgcagaaccg atccgagaag CD 551 gcttggtggt atcaataacg gtttctcgaa atggagggca tCga FT EDITED CDNA CD 1 atgatattta gttccacgaa taggaaggag agaaatatgc tatttgctgc CD 51 tattctattt attcgtgtat taagctcgaa gaagatctca atatataatg CD 101 aagaaatgat agtagcttgt cgttttatag gctttatcat atccagtcag CD 151 aagagttcgg gtaatactct caaagcgatt ttcgacggga gaatcggagc CD 201 tattcagaaa gaattgcagc aattccccaa tcccaacgaa gttgtttctc CD 251 cggaatccaa tgaacaacaa caattactta ggatcagctt gcgttcaatt CD 301 acgccagaga ttgtagaatc attaccaaat gagacggcac gctgtgcgcc CD 351 taagtgcgaa aagacagtgc aagctgtgtt atgccgaaac ctaaatgtaa CD 401 agttagcaac acttccaaat gccatttatt cccgtcgcat ccgtcttcgg CD 451 gacgatatag tcacaggttt tcacttctca gtgagtgaaa aatttgtccc CD 501 ctgcaccacc gatacgaaaa aagcttttat cgcagaaccg atccgagaag CD 551 gcttggtggt atcaataacg gtttctcgaa atggagggca tTga SQ SEQUENCE 198 AA; MIFSSTNRKE RNMLFAAILF IRVLSSKKIS IYNEEMIVAC RFIGFIISSQ KSSGNTLKAI FDGRIGAIQK ELQQFPNPNE VVSPESNEQQ QLLRISLRSI TPEIVESLPN ETARCAPKCE KTVQAVLCRN LNVKLATLPN AIYSRRIRLR DDIVTGFHFS VSEKFVPCTT DTKKAFIAEP IREGLVVSIT VSRNGGH* // ID AP009381_36 STANDARD; PRT; 163 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : atp8 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98430.1 FT PROTEIN_NAME : ATPase subunit 8 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 345649 - 346137 FT DIRECTIONS : positive FT EDITING : 163 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 489 NT; CD 1 atgattcctc aaccggataa attcacttat tccacacaat tcttccggtt CD 51 atgcctgatc ttcttcactt cttatattcc cccatgcaat gatggagtac CD 101 ttaggatcag cagaattccc aaaccacgga accaactggt tccgcaccaa CD 151 cgaaggggga acaacatccg gagcaacgac cccaacagtt tggaagagat CD 201 ttcgagaaaa ggttttagca ccggtgtatc ccatatgtac tctagttcat CD 251 tcgaagtatc ccaatggtgt aacgccgtcg acttattggg gaaaaggaag CD 301 agaatcactt atatatcctg tttcggagaa ataagtggct cacgaggaat CD 351 ggaaaggaac attctatatc tgatttcgaa gtatccatat agcacttatt CD 401 ccaatcctat atctggatgg aggattcctt gtaggaatga cataatgctg CD 451 atccatgttt tacacggcca ggtaaacatc gtttgtCaa FT EDITED CDNA CD 1 atgattcctc aaccggataa attcacttat tccacacaat tcttccggtt CD 51 atgcctgatc ttcttcactt cttatattcc cccatgcaat gatggagtac CD 101 ttaggatcag cagaattccc aaaccacgga accaactggt tccgcaccaa CD 151 cgaaggggga acaacatccg gagcaacgac cccaacagtt tggaagagat CD 201 ttcgagaaaa ggttttagca ccggtgtatc ccatatgtac tctagttcat CD 251 tcgaagtatc ccaatggtgt aacgccgtcg acttattggg gaaaaggaag CD 301 agaatcactt atatatcctg tttcggagaa ataagtggct cacgaggaat CD 351 ggaaaggaac attctatatc tgatttcgaa gtatccatat agcacttatt CD 401 ccaatcctat atctggatgg aggattcctt gtaggaatga cataatgctg CD 451 atccatgttt tacacggcca ggtaaacatc gtttgtTaa SQ SEQUENCE 163 AA; MIPQPDKFTY STQFFRLCLI FFTSYIPPCN DGVLRISRIP KPRNQLVPHQ RRGNNIRSND PNSLEEISRK GFSTGVSHMY SSSFEVSQWC NAVDLLGKRK RITYISCFGE ISGSRGMERN ILYLISKYPY STYSNPISGW RIPCRNDIML IHVLHGQVNI VC* // ID AP009381_37 STANDARD; PRT; 705 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT C-terminal not determined FT GENE : matR FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98432.1 FT PROTEIN_NAME : maturase-related protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 362745 - 364859 FT DIRECTIONS : negative FT EDITING : 705 Q(Cag) -> *(Tag) FT CODON_START : 1 CL CDNALEN 2115 NT; CD 1 gggttgaagt ccagaccgct cacagtagta gtaccgatag aaaagatcat CD 51 taaagaggcg ataagagcgg tacccgaatc catttacgat cccgagtttc CD 101 cggacacatc gcacttccgc ccgggtcgag gctgccactc ggccctaata CD 151 cggataaaaa aagagcgggg aacctctcgt tggttcttgg aattcggcat CD 201 cctaaagtgt tttcacacca tcgaccggca tcgactcatc tcaatcttta CD 251 aggaagagat cgacgatccc aagttctttt accccactca taaactgctt CD 301 tccgccggac gacttgtagg aggtgagaag ggtggccgcc cttcctccgt CD 351 cccacacagt gtactactat cggccctacc aggcaacatc tacccacaca CD 401 agctcgatca ggagatggag aggatccgac agaagcacga aattccgatt CD 451 gttcagataa tcaaattggt tccattaaag acaggtcgta ttgatgacca CD 501 agaaaactct ggagaagaag caagcttcaa ctctcccgga gacaacagag CD 551 ccatcgttgt ggggagggta aaaagcatcc agcgcaaagc ggcgttttat CD 601 tcccttgttt tgtcgtggca cacccccccc acaagcaccc cccgacgaag CD 651 gggagaccag aaaacgcctt tagttttccc cccttcgtcg gggggccccc CD 701 ttgccgcctt ctctaacaag ccctcgagcc tcctttgcgc cgccttcctc CD 751 attcgtaaag aagccgccgg gttgaccccg gaacgaagaa aggccgaagg CD 801 tagagaacgc cctttatcta ataagaagaa gaacagggta gcgttctcca CD 851 tgaaagaccc tattaagtat tgcaagagaa ggggcctgct gatagagctg CD 901 ggcggggagg cgataccagt tatcaggtta gaaagacgcc tagcccgtaa CD 951 gcaggggcta tcccccgttc acttaaatga cctatactta atcaggattt CD 1001 gttacgcgcg atatgccgac gacttaccac tgggaatcgt gggtaccgta CD 1051 gagcttataa gaggaatcca aaaacgtatc acccacttcc tacaatccgg CD 1101 cccgaacctt gaggtaggct ctgcaagatc aacttacata gctgcacgga CD 1151 gtacggtaga atcccccggt acggtcattc gggaagtccc ttcggggacg CD 1201 actcccatac aattattgcg agagctggag aagcgtcgga gagtaaagca CD 1251 ccgtatccat ctcacagctc cccacctacg ctccgccatc cattccgagt CD 1301 tagaggacct agggaggagt atcctgatcc aacagctgac gagggggatg CD 1351 agcggaacag ggagtctaca ggacgcggtt caactggcgg agactcttgg CD 1401 aacagctgga gtaagaagtc cccgagtgag cgcgagcgta ttatgggaga CD 1451 ccgtcaagca catccggcaa ggatcaaggg aaatcttgtt gttgcatagc CD 1501 ccaggtcgga gcaacgtgcc atcagacgtt caacaggcag tctcacgatc CD 1551 gggcaaatcg ttgagcgtct ggaagttgtc attgcatact cccagagaag CD 1601 cgctgggagg tcggaaggcg gcgggggaag gagggggaca ctgggaacag CD 1651 acgggatctt tcagcagcaa attacccata cagataaagg cgcctatgaa CD 1701 aaagatactc caaaggcttc gggatcgagg tatcattagc cggagaagac CD 1751 cctggccaac ccacgtggcc tgcttgacga acgtcagcga cgaagacatc CD 1801 gtaaatcggt tcgcgggcgt cgcgataagt cctctgtccc accataggtg CD 1851 ctgcgacaac ctctatcaag tccgaacgat tgtcgactac cagatccgct CD 1901 ggtccgctgt attcacccct gcccacaagc acaaatcctc ggcgcggaag CD 1951 ataatcccaa agtactccaa agactcacat atagtcaata aagaaggtgg CD 2001 taagacccct gccgagttcc ccaacagcat agagcttagg aagctcggac CD 2051 cagagtcatt ccttacaagt caagatctga acaacaagga gcacgcgtac CD 2101 aagaccttat atCag FT EDITED CDNA CD 1 gggttgaagt ccagaccgct cacagtagta gtaccgatag aaaagatcat CD 51 taaagaggcg ataagagcgg tacccgaatc catttacgat cccgagtttc CD 101 cggacacatc gcacttccgc ccgggtcgag gctgccactc ggccctaata CD 151 cggataaaaa aagagcgggg aacctctcgt tggttcttgg aattcggcat CD 201 cctaaagtgt tttcacacca tcgaccggca tcgactcatc tcaatcttta CD 251 aggaagagat cgacgatccc aagttctttt accccactca taaactgctt CD 301 tccgccggac gacttgtagg aggtgagaag ggtggccgcc cttcctccgt CD 351 cccacacagt gtactactat cggccctacc aggcaacatc tacccacaca CD 401 agctcgatca ggagatggag aggatccgac agaagcacga aattccgatt CD 451 gttcagataa tcaaattggt tccattaaag acaggtcgta ttgatgacca CD 501 agaaaactct ggagaagaag caagcttcaa ctctcccgga gacaacagag CD 551 ccatcgttgt ggggagggta aaaagcatcc agcgcaaagc ggcgttttat CD 601 tcccttgttt tgtcgtggca cacccccccc acaagcaccc cccgacgaag CD 651 gggagaccag aaaacgcctt tagttttccc cccttcgtcg gggggccccc CD 701 ttgccgcctt ctctaacaag ccctcgagcc tcctttgcgc cgccttcctc CD 751 attcgtaaag aagccgccgg gttgaccccg gaacgaagaa aggccgaagg CD 801 tagagaacgc cctttatcta ataagaagaa gaacagggta gcgttctcca CD 851 tgaaagaccc tattaagtat tgcaagagaa ggggcctgct gatagagctg CD 901 ggcggggagg cgataccagt tatcaggtta gaaagacgcc tagcccgtaa CD 951 gcaggggcta tcccccgttc acttaaatga cctatactta atcaggattt CD 1001 gttacgcgcg atatgccgac gacttaccac tgggaatcgt gggtaccgta CD 1051 gagcttataa gaggaatcca aaaacgtatc acccacttcc tacaatccgg CD 1101 cccgaacctt gaggtaggct ctgcaagatc aacttacata gctgcacgga CD 1151 gtacggtaga atcccccggt acggtcattc gggaagtccc ttcggggacg CD 1201 actcccatac aattattgcg agagctggag aagcgtcgga gagtaaagca CD 1251 ccgtatccat ctcacagctc cccacctacg ctccgccatc cattccgagt CD 1301 tagaggacct agggaggagt atcctgatcc aacagctgac gagggggatg CD 1351 agcggaacag ggagtctaca ggacgcggtt caactggcgg agactcttgg CD 1401 aacagctgga gtaagaagtc cccgagtgag cgcgagcgta ttatgggaga CD 1451 ccgtcaagca catccggcaa ggatcaaggg aaatcttgtt gttgcatagc CD 1501 ccaggtcgga gcaacgtgcc atcagacgtt caacaggcag tctcacgatc CD 1551 gggcaaatcg ttgagcgtct ggaagttgtc attgcatact cccagagaag CD 1601 cgctgggagg tcggaaggcg gcgggggaag gagggggaca ctgggaacag CD 1651 acgggatctt tcagcagcaa attacccata cagataaagg cgcctatgaa CD 1701 aaagatactc caaaggcttc gggatcgagg tatcattagc cggagaagac CD 1751 cctggccaac ccacgtggcc tgcttgacga acgtcagcga cgaagacatc CD 1801 gtaaatcggt tcgcgggcgt cgcgataagt cctctgtccc accataggtg CD 1851 ctgcgacaac ctctatcaag tccgaacgat tgtcgactac cagatccgct CD 1901 ggtccgctgt attcacccct gcccacaagc acaaatcctc ggcgcggaag CD 1951 ataatcccaa agtactccaa agactcacat atagtcaata aagaaggtgg CD 2001 taagacccct gccgagttcc ccaacagcat agagcttagg aagctcggac CD 2051 cagagtcatt ccttacaagt caagatctga acaacaagga gcacgcgtac CD 2101 aagaccttat atTag SQ SEQUENCE 705 AA; GLKSRPLTVV VPIEKIIKEA IRAVPESIYD PEFPDTSHFR PGRGCHSALI RIKKERGTSR WFLEFGILKC FHTIDRHRLI SIFKEEIDDP KFFYPTHKLL SAGRLVGGEK GGRPSSVPHS VLLSALPGNI YPHKLDQEME RIRQKHEIPI VQIIKLVPLK TGRIDDQENS GEEASFNSPG DNRAIVVGRV KSIQRKAAFY SLVLSWHTPP TSTPRRRGDQ KTPLVFPPSS GGPLAAFSNK PSSLLCAAFL IRKEAAGLTP ERRKAEGRER PLSNKKKNRV AFSMKDPIKY CKRRGLLIEL GGEAIPVIRL ERRLARKQGL SPVHLNDLYL IRICYARYAD DLPLGIVGTV ELIRGIQKRI THFLQSGPNL EVGSARSTYI AARSTVESPG TVIREVPSGT TPIQLLRELE KRRRVKHRIH LTAPHLRSAI HSELEDLGRS ILIQQLTRGM SGTGSLQDAV QLAETLGTAG VRSPRVSASV LWETVKHIRQ GSREILLLHS PGRSNVPSDV QQAVSRSGKS LSVWKLSLHT PREALGGRKA AGEGGGHWEQ TGSFSSKLPI QIKAPMKKIL QRLRDRGIIS RRRPWPTHVA CLTNVSDEDI VNRFAGVAIS PLSHHRCCDN LYQVRTIVDY QIRWSAVFTP AHKHKSSARK IIPKYSKDSH IVNKEGGKTP AEFPNSIELR KLGPESFLTS QDLNNKEHAY KTLY* // ID AP009381_41 STANDARD; PRT; 232 AA. AC AP009381; DT Tue Jul 21 07:03:09 2009 DE Cycas taitungensis mitochondrial DNA, complete genome. OS mitochondrion Cycas taitungensis OC Cycas taitungensis RN [1] RL Mol. Biol. Evol. 24 (9), 2040-2048 (2007) RL PUBMED 17609537 FT Full length CDS FT GENE : rps7 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAF98435.1 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 392501 - 393196 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 696 NT; CD 1 aCgaacagag gaggtggggg ggaacggaac atttcgcttt tatgcgcgcg CD 51 catattgcat tatatagata gattggccga gaaggatgag cagaagcaat CD 101 tgcgtgatag ggagttggcc gaaaaagatg gacagaaaca attgcataat CD 151 ataaattcat cggcggccgg gggagaggga gggcttttgt caccaaaacc CD 201 taggggccgt agggcgggca catacaatct cttggagatt ttgagctata CD 251 tcgggggatt ggatggtaaa cagaaacaat tgatcaataa gtcagtcaac CD 301 tttcgcacga tcgatggcaa aagaacgaaa gctcgtgcta ttgcttatca CD 351 aacttttcat cgcccagctc gaactgaacg cgatgtgatc aaacttctgg CD 401 ttaatgccgt agagaatata aagcccatat gcgaagcggg aaaagtaaga CD 451 gtcgcaggta ctacttataa tgtacctgag attgtagcca gggatcgtca CD 501 acaaacctta gctattcgtt ggatccttgg agcagctttc aagcgacgta CD 551 taagcaacgg gataggctca gataaatgtt tatctgctga gacactggat CD 601 gctcaccgaa agaggggaat tgcacgtaag aaaagggatg atcctcatga CD 651 accggcttcc accaatcgaa gtttcgcgca tctcagatgg tggtaa FT EDITED CDNA CD 1 aTgaacagag gaggtggggg ggaacggaac atttcgcttt tatgcgcgcg CD 51 catattgcat tatatagata gattggccga gaaggatgag cagaagcaat CD 101 tgcgtgatag ggagttggcc gaaaaagatg gacagaaaca attgcataat CD 151 ataaattcat cggcggccgg gggagaggga gggcttttgt caccaaaacc CD 201 taggggccgt agggcgggca catacaatct cttggagatt ttgagctata CD 251 tcgggggatt ggatggtaaa cagaaacaat tgatcaataa gtcagtcaac CD 301 tttcgcacga tcgatggcaa aagaacgaaa gctcgtgcta ttgcttatca CD 351 aacttttcat cgcccagctc gaactgaacg cgatgtgatc aaacttctgg CD 401 ttaatgccgt agagaatata aagcccatat gcgaagcggg aaaagtaaga CD 451 gtcgcaggta ctacttataa tgtacctgag attgtagcca gggatcgtca CD 501 acaaacctta gctattcgtt ggatccttgg agcagctttc aagcgacgta CD 551 taagcaacgg gataggctca gataaatgtt tatctgctga gacactggat CD 601 gctcaccgaa agaggggaat tgcacgtaag aaaagggatg atcctcatga CD 651 accggcttcc accaatcgaa gtttcgcgca tctcagatgg tggtaa SQ SEQUENCE 232 AA; MNRGGGGERN ISLLCARILH YIDRLAEKDE QKQLRDRELA EKDGQKQLHN INSSAAGGEG GLLSPKPRGR RAGTYNLLEI LSYIGGLDGK QKQLINKSVN FRTIDGKRTK ARAIAYQTFH RPARTERDVI KLLVNAVENI KPICEAGKVR VAGTTYNVPE IVARDRQQTL AIRWILGAAF KRRISNGIGS DKCLSAETLD AHRKRGIARK KRDDPHEPAS TNRSFAHLRW W* // ID AY030286_1 STANDARD; PRT; 328 AA. AC AY030286; DT Tue Jul 21 07:03:14 2009 DE Prorocentrum minimum cytochrome b gene, partial cds; mitochondrial OS mitochondrion Prorocentrum minimum OC Prorocentrum minimum RN [1] RL J. Mol. Biol. 320 (4), 727-739 (2002) RL PUBMED 12095251 FT N-terminal not determined FT C-terminal not determined FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAK67259.3 FT PROTEIN_NAME : cytochrome b FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 982 FT DIRECTIONS : positive FT EDITING : 16 F(tTt) -> S(tCt) FT EDITING : 26 V(Gtt) -> I(Att) FT EDITING : 27 A(Gct) -> T(Act) FT EDITING : 29 M(atG) -> I(atA) FT EDITING : 33 V(Gtc) -> I(Atc) FT EDITING : 39 A(gCt) -> G(gGt) FT EDITING : 56 L(Ctt) -> F(Ttt) FT EDITING : 60 V(Gtc) -> I(Atc) FT EDITING : 69 F(Ttt) -> L(Ctt) FT EDITING : 72 A(GcG) -> T(AcT) FT EDITING : 90 F(tTt) -> S(tCt) FT EDITING : 108 L(Ctc) -> F(Ttc) FT EDITING : 114 I(aTa) -> T(aCa) FT EDITING : 145 V(Gta) -> I(Ata) FT EDITING : 148 I(Att) -> V(Gtt) FT EDITING : 152 Y(Tat) -> H(Cat) FT EDITING : 153 C(tGt) -> Y(tAt) FT EDITING : 155 H(Cac) -> Y(Tac) FT EDITING : 156 C(tGt) -> Y(tAt) FT EDITING : 215 L(CtT) -> F(TtC) FT EDITING : 223 F(Ttt) -> L(Ctt) FT EDITING : 230 V(Gtc) -> I(Atc) FT EDITING : 233 L(Ctc) -> F(Ttc) FT EDITING : 242 A(gCt) -> V(gTt) FT EDITING : 244 A(gCa) -> G(gGa) FT EDITING : 276 V(Gtg) -> M(Atg) FT EDITING : 283 A(Gct) -> T(Act) FT EDITING : 284 L(Ctc) -> F(Ttc) FT CODON_START : 1 CL CDNALEN 982 NT; CD 1 atgaaatctc atttacaaac atatccttgt cctcttcaga ttaattTttt CD 51 ttggaatctg ggttttttat taggaGttGc tattatGtta caaattGtca CD 101 caggaatctt cttagCttta cattatacat cagatcttaa ttcagcatat CD 151 tatcaaattt tctttCttat tagagaaGtc tattatggac ggtgtttacg CD 201 ttatTttcat tctGcGggag catcatttgt ctttctattt ctatttctac CD 251 atcttggaag agctatatTt tatggttcat acttttattc atcttctact CD 301 tggttttcag gaattcttct tCtcttcttc ttaatggcta Tagcatttat CD 351 tggttatgtc ttaccttttg gacaaatgag tttctgggga gctacagtaa CD 401 ttacaaattt attatctcct tttccatctt taGtagaatg gAtttgtgga CD 451 ggaTattGtg ttCactGtcc aacattgaag aggttctttc tcattcattt CD 501 tatcttccca tttctccttt gtggttttct ttttattcat cttttttatc CD 551 ttcattttct atcttctaat aatcctttga ggaattcaac aaataataaa CD 601 atcccatttt tccctttcat ttttcttaaa gatttctttg gtCtTattct CD 651 aattctctgt ctatatTttc ttcaaactca ttttcacGtc tcttctCtct CD 701 cacatccaga taatgcatta gaagCttctg Cattacttac tcctttacat CD 751 atagtacctg aatggtattt cctatgccaa tatgctatgt taaaagctgt CD 801 tcccaacaaa aatgcaggat tcataGtgtt attaacttct atctttGctC CD 851 tctttttctt tggagaaatt agaaatctaa caactttctg tctcttaaat CD 901 aataatggtt tttctctttc aaaatcttat ttctttcttc tggttctttc CD 951 ttttctttgg ataggtgctc aattccctca ag FT EDITED CDNA CD 1 atgaaatctc atttacaaac atatccttgt cctcttcaga ttaattCttt CD 51 ttggaatctg ggttttttat taggaAttAc tattatAtta caaattAtca CD 101 caggaatctt cttagGttta cattatacat cagatcttaa ttcagcatat CD 151 tatcaaattt tctttTttat tagagaaAtc tattatggac ggtgtttacg CD 201 ttatCttcat tctAcTggag catcatttgt ctttctattt ctatttctac CD 251 atcttggaag agctatatCt tatggttcat acttttattc atcttctact CD 301 tggttttcag gaattcttct tTtcttcttc ttaatggcta Cagcatttat CD 351 tggttatgtc ttaccttttg gacaaatgag tttctgggga gctacagtaa CD 401 ttacaaattt attatctcct tttccatctt taAtagaatg gGtttgtgga CD 451 ggaCattAtg ttTactAtcc aacattgaag aggttctttc tcattcattt CD 501 tatcttccca tttctccttt gtggttttct ttttattcat cttttttatc CD 551 ttcattttct atcttctaat aatcctttga ggaattcaac aaataataaa CD 601 atcccatttt tccctttcat ttttcttaaa gatttctttg gtTtCattct CD 651 aattctctgt ctatatCttc ttcaaactca ttttcacAtc tcttctTtct CD 701 cacatccaga taatgcatta gaagTttctg Gattacttac tcctttacat CD 751 atagtacctg aatggtattt cctatgccaa tatgctatgt taaaagctgt CD 801 tcccaacaaa aatgcaggat tcataAtgtt attaacttct atctttActT CD 851 tctttttctt tggagaaatt agaaatctaa caactttctg tctcttaaat CD 901 aataatggtt tttctctttc aaaatcttat ttctttcttc tggttctttc CD 951 ttttctttgg ataggtgctc aattccctca ag SQ SEQUENCE 328 AA; MKSHLQTYPC PLQINSFWNL GFLLGITIIL QIITGIFLGL HYTSDLNSAY YQIFFFIREI YYGRCLRYLH STGASFVFLF LFLHLGRAIS YGSYFYSSST WFSGILLFFF LMATAFIGYV LPFGQMSFWG ATVITNLLSP FPSLIEWVCG GHYVYYPTLK RFFLIHFIFP FLLCGFLFIH LFYLHFLSSN NPLRNSTNNK IPFFPFIFLK DFFGFILILC LYLLQTHFHI SSFSHPDNAL EVSGLLTPLH IVPEWYFLCQ YAMLKAVPNK NAGFIMLLTS IFTFFFFGEI RNLTTFCLLN NNGFSLSKSY FFLLVLSFLW IGAQFPQX // ID AY178864_2 STANDARD; PRT; 499 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhB FT NOTE : ndhB spans the LSC and IR with the intron across FT LOCUS_TAG : FT PROTEIN_ID : AAP29370.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 243/0 FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 31 A(gCC) -> V(gTT) FT EDITING : 71 T(acC) -> T(acT) FT EDITING : 94 S(tCa) -> L(tTa) FT EDITING : 149 C(tgC) -> C(tgT) FT EDITING : 155 T(acC) -> T(acT) FT EDITING : 166 T(aCg) -> M(aTg) FT EDITING : 170 S(tCg) -> L(tTg) FT EDITING : 178 P(cCc) -> L(cTc) FT EDITING : 185 S(tCg) -> L(tTg) FT EDITING : 189 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 1497 NT; CD 1 aCgaatgata ttaacttatt tttagcaaaa ttaacttata cctccgccaa CD 51 attgacaatt ttaccagaaa ttatcttgat tctaggctta gCCgcagtag CD 101 ttgtaattga cttattgagt aaaggaaaaa acacattttt gctttacaaa CD 151 atctccatgg taaccctttt agctagtgca gttatcttgt tatggcagtg CD 201 gggatttttt acCgcttatg aacgttctca cgccagagat tttgggaata CD 251 ttttcagatt ttttttactc atttgctcgt Cattatctat ttcttcgtcg CD 301 gttgattata tactttgttc aaaaatgtct ttagctgaat ttttattgtt CD 351 taaattagct gcaggtttgg ggggtatggt tctcagttgt gcaaatgatt CD 401 tggtaactat ttacgtgtcc ctggaattct tagccttatc ttcctgCttt CD 451 ttatctggat atacCaaacg ggacatgaga tcgaatgaag caactaCgaa CD 501 attcctgtCg atgagtggag cgagttcctc ccCcctatta tatggtttct CD 551 cttCgttata tggacCttcc ggcggacagc ttcagcttga caaaatagtt CD 601 gacggaatta tattcaatcg atatggttct ataatttatc tatctgctgc CD 651 gtttactaca gccggaacag cattcaaatt gtctctcttt ccatttcacc CD 701 agtggacacc tgatgtatat gaaggatccc ctacaccagt cgttgctttt CD 751 ttctccgtta cctccaaagt agcagctcca gcttcattta caagactctt CD 801 cggtctaatt ttcccatact tctctaatga gtggcatgtc gcggtgggat CD 851 tattagctac ctttagcatg atattgggaa atttaattgc cgttactcag CD 901 agaagcgtaa aacgtatgct agcttatcct tctataagcc aaattggata CD 951 tatcatgatt ggggtacttt ctgcagactc agggaacggt tacgcaagta CD 1001 tgataactta tacgtttatc tatatactca tgaatttggg aacttttgct CD 1051 cgtatcaccc catttggttt acgaaccgga actgataata tcagggatta CD 1101 tgcgggatta tacatgaagg atcctgttct aacattttct tcggttttac CD 1151 gttcaccatc cctagggggt atgcctccac catccggttt ttttggtaaa CD 1201 ctctatctct tttggcatgg atggaaagct ggtttgtact catcagttcc CD 1251 ggtggcgctc gtcacaagtg tcatttccat ctattactat ctaaaaataa CD 1301 ttaaatcaat gttcaccggg aagagtggga ggagcgatac acccctaaat CD 1351 tctagacaaa attcattagt ttctctatca atttcgattt cgaaaaattc CD 1401 tcttgaaata gctatgatca ttcgtgcgct agcatcaacc ctatcgggta CD 1451 tattcataga tcctattatc gagatcacac ggaatacctt cttttag FT EDITED CDNA CD 1 aTgaatgata ttaacttatt tttagcaaaa ttaacttata cctccgccaa CD 51 attgacaatt ttaccagaaa ttatcttgat tctaggctta gTTgcagtag CD 101 ttgtaattga cttattgagt aaaggaaaaa acacattttt gctttacaaa CD 151 atctccatgg taaccctttt agctagtgca gttatcttgt tatggcagtg CD 201 gggatttttt acTgcttatg aacgttctca cgccagagat tttgggaata CD 251 ttttcagatt ttttttactc atttgctcgt Tattatctat ttcttcgtcg CD 301 gttgattata tactttgttc aaaaatgtct ttagctgaat ttttattgtt CD 351 taaattagct gcaggtttgg ggggtatggt tctcagttgt gcaaatgatt CD 401 tggtaactat ttacgtgtcc ctggaattct tagccttatc ttcctgTttt CD 451 ttatctggat atacTaaacg ggacatgaga tcgaatgaag caactaTgaa CD 501 attcctgtTg atgagtggag cgagttcctc ccTcctatta tatggtttct CD 551 cttTgttata tggacTttcc ggcggacagc ttcagcttga caaaatagtt CD 601 gacggaatta tattcaatcg atatggttct ataatttatc tatctgctgc CD 651 gtttactaca gccggaacag cattcaaatt gtctctcttt ccatttcacc CD 701 agtggacacc tgatgtatat gaaggatccc ctacaccagt cgttgctttt CD 751 ttctccgtta cctccaaagt agcagctcca gcttcattta caagactctt CD 801 cggtctaatt ttcccatact tctctaatga gtggcatgtc gcggtgggat CD 851 tattagctac ctttagcatg atattgggaa atttaattgc cgttactcag CD 901 agaagcgtaa aacgtatgct agcttatcct tctataagcc aaattggata CD 951 tatcatgatt ggggtacttt ctgcagactc agggaacggt tacgcaagta CD 1001 tgataactta tacgtttatc tatatactca tgaatttggg aacttttgct CD 1051 cgtatcaccc catttggttt acgaaccgga actgataata tcagggatta CD 1101 tgcgggatta tacatgaagg atcctgttct aacattttct tcggttttac CD 1151 gttcaccatc cctagggggt atgcctccac catccggttt ttttggtaaa CD 1201 ctctatctct tttggcatgg atggaaagct ggtttgtact catcagttcc CD 1251 ggtggcgctc gtcacaagtg tcatttccat ctattactat ctaaaaataa CD 1301 ttaaatcaat gttcaccggg aagagtggga ggagcgatac acccctaaat CD 1351 tctagacaaa attcattagt ttctctatca atttcgattt cgaaaaattc CD 1401 tcttgaaata gctatgatca ttcgtgcgct agcatcaacc ctatcgggta CD 1451 tattcataga tcctattatc gagatcacac ggaatacctt cttttag SQ SEQUENCE 499 AA; MNDINLFLAK LTYTSAKLTI LPEIILILGL VAVVVIDLLS KGKNTFLLYK ISMVTLLASA VILLWQWGFF TAYERSHARD FGNIFRFFLL ICSLLSISSS VDYILCSKMS LAEFLLFKLA AGLGGMVLSC ANDLVTIYVS LEFLALSSCF LSGYTKRDMR SNEATMKFLL MSGASSSLLL YGFSLLYGLS GGQLQLDKIV DGIIFNRYGS IIYLSAAFTT AGTAFKLSLF PFHQWTPDVY EGSPTPVVAF FSVTSKVAAP ASFTRLFGLI FPYFSNEWHV AVGLLATFSM ILGNLIAVTQ RSVKRMLAYP SISQIGYIMI GVLSADSGNG YASMITYTFI YILMNLGTFA RITPFGLRTG TDNIRDYAGL YMKDPVLTFS SVLRSPSLGG MPPPSGFFGK LYLFWHGWKA GLYSSVPVAL VTSVISIYYY LKIIKSMFTG KSGRSDTPLN SRQNSLVSLS ISISKNSLEI AMIIRALAST LSGIFIDPII EITRNTFF* // ID AY178864_3 STANDARD; PRT; 501 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : matK FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29371.2 FT PROTEIN_NAME : maturase K FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1379 - 2881 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 165 S(tCa) -> L(tTa) FT EDITING : 333 S(tCc) -> F(tTc) FT EDITING : 334 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 aCgaaagtca attacggatc tcctgctaaa tctggtcctt tacataagaa CD 51 cggggagttt tatattaaca agaattgttt tttacaccca cttctttttt CD 101 tgtctgagga gaatttttat ttgacagatg gcaaacgccg atcacatggt CD 151 gcagacgcca acttggtttt tggggcctgg agtacggtgg cagtcaaacg CD 201 tttaattggt agcgtacgtg accctaatct aaattttttg aaaatttacg CD 251 attcagtgtc tgttcgaaac ttaaccgacg gattagacgt ggatttgtat CD 301 cttcacccgc ttttgaaaat gacatatctc atattaggca tagccctttt CD 351 tcctaaaatc agagctgaaa caagtagtaa gtcaaagatg ttgcagtcta CD 401 ttcattcgat gtttttattt ctggaagata gattttcaaa atctaatcat CD 451 attttagaag cggatttgcc acataatctt catctagaaa cttCaattcg CD 501 attgttccga cgacaaatta aagatgtttc atttctgcat ctgctaagaa CD 551 tagtttttcg taaaagaaaa atattttgcg gaaaaacttt ttattcccct CD 601 gggggggggc aagacggaag tgttgacatc ccagttcgaa atttctacat CD 651 cttcgagatc gattcacttc tactgatccc ctggaaacag gtatataaat CD 701 tccgagtcaa ttatttatcc cctatagata gttgtaatat cattcggaaa CD 751 gagatatatg cttctgcata taaattcaaa tggaacaaag cgagtattga CD 801 ttactccttt agccgaagtt tgtggattca ttacggaaga tggagaaaca CD 851 aatttcttat agcctccgag ggaactcact attttgtgaa aaaaatgctt CD 901 tactatcttt ggatacttct aaaatatcat tttcactatc ggatcaaatc CD 951 taatgaaccc tggataagaa aattattacc cactagctgc gtctcatCcc CD 1001 Cgggttatac actactagcg caactggtat caaaaaatgt tcgtattgaa CD 1051 accgtgacag atttgtatat cagtattttg ggtggaaaaa agttttatcc CD 1101 taaaattcca aattcaataa taattactac cttggcaaaa caaagatttt CD 1151 gtgacttcac tggacgtccg attggtaaat cggcctgggt tacttctaca CD 1201 gatgataaaa taattgatgg atatgtccaa ctttggcaag ttttttcctt CD 1251 gtattatggt gcctcgatga atcagtatag attgcgcaga ttgatatttc CD 1301 tattgcagat gtcatgtgat agtacgttag ctggtaaaca tagaagtaca CD 1351 atacgtctct tgagatgtaa atctaatgta gaggcgctca atcaaattct CD 1401 ggcatctaga aagtttgaat tgtctagtag tcggagggtt tggcgttcat CD 1451 cttcgatacg gtctgtctta gtacaattca ccgtattaga tatcgggctc CD 1501 tga FT EDITED CDNA CD 1 aTgaaagtca attacggatc tcctgctaaa tctggtcctt tacataagaa CD 51 cggggagttt tatattaaca agaattgttt tttacaccca cttctttttt CD 101 tgtctgagga gaatttttat ttgacagatg gcaaacgccg atcacatggt CD 151 gcagacgcca acttggtttt tggggcctgg agtacggtgg cagtcaaacg CD 201 tttaattggt agcgtacgtg accctaatct aaattttttg aaaatttacg CD 251 attcagtgtc tgttcgaaac ttaaccgacg gattagacgt ggatttgtat CD 301 cttcacccgc ttttgaaaat gacatatctc atattaggca tagccctttt CD 351 tcctaaaatc agagctgaaa caagtagtaa gtcaaagatg ttgcagtcta CD 401 ttcattcgat gtttttattt ctggaagata gattttcaaa atctaatcat CD 451 attttagaag cggatttgcc acataatctt catctagaaa cttTaattcg CD 501 attgttccga cgacaaatta aagatgtttc atttctgcat ctgctaagaa CD 551 tagtttttcg taaaagaaaa atattttgcg gaaaaacttt ttattcccct CD 601 gggggggggc aagacggaag tgttgacatc ccagttcgaa atttctacat CD 651 cttcgagatc gattcacttc tactgatccc ctggaaacag gtatataaat CD 701 tccgagtcaa ttatttatcc cctatagata gttgtaatat cattcggaaa CD 751 gagatatatg cttctgcata taaattcaaa tggaacaaag cgagtattga CD 801 ttactccttt agccgaagtt tgtggattca ttacggaaga tggagaaaca CD 851 aatttcttat agcctccgag ggaactcact attttgtgaa aaaaatgctt CD 901 tactatcttt ggatacttct aaaatatcat tttcactatc ggatcaaatc CD 951 taatgaaccc tggataagaa aattattacc cactagctgc gtctcatTcc CD 1001 Tgggttatac actactagcg caactggtat caaaaaatgt tcgtattgaa CD 1051 accgtgacag atttgtatat cagtattttg ggtggaaaaa agttttatcc CD 1101 taaaattcca aattcaataa taattactac cttggcaaaa caaagatttt CD 1151 gtgacttcac tggacgtccg attggtaaat cggcctgggt tacttctaca CD 1201 gatgataaaa taattgatgg atatgtccaa ctttggcaag ttttttcctt CD 1251 gtattatggt gcctcgatga atcagtatag attgcgcaga ttgatatttc CD 1301 tattgcagat gtcatgtgat agtacgttag ctggtaaaca tagaagtaca CD 1351 atacgtctct tgagatgtaa atctaatgta gaggcgctca atcaaattct CD 1401 ggcatctaga aagtttgaat tgtctagtag tcggagggtt tggcgttcat CD 1451 cttcgatacg gtctgtctta gtacaattca ccgtattaga tatcgggctc CD 1501 tga SQ SEQUENCE 501 AA; MKVNYGSPAK SGPLHKNGEF YINKNCFLHP LLFLSEENFY LTDGKRRSHG ADANLVFGAW STVAVKRLIG SVRDPNLNFL KIYDSVSVRN LTDGLDVDLY LHPLLKMTYL ILGIALFPKI RAETSSKSKM LQSIHSMFLF LEDRFSKSNH ILEADLPHNL HLETLIRLFR RQIKDVSFLH LLRIVFRKRK IFCGKTFYSP GGGQDGSVDI PVRNFYIFEI DSLLLIPWKQ VYKFRVNYLS PIDSCNIIRK EIYASAYKFK WNKASIDYSF SRSLWIHYGR WRNKFLIASE GTHYFVKKML YYLWILLKYH FHYRIKSNEP WIRKLLPTSC VSFLGYTLLA QLVSKNVRIE TVTDLYISIL GGKKFYPKIP NSIIITTLAK QRFCDFTGRP IGKSAWVTST DDKIIDGYVQ LWQVFSLYYG ASMNQYRLRR LIFLLQMSCD STLAGKHRST IRLLRCKSNV EALNQILASR KFELSSSRRV WRSSSIRSVL VQFTVLDIGL * // ID AY178864_5 STANDARD; PRT; 519 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : chlB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29373.2 FT PROTEIN_NAME : photochlorophyllide reductase subunit ChlB FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 4441 - 5997 FT DIRECTIONS : negative FT EDITING : 5 H(Cat) -> Y(Tat) FT EDITING : 6 R(Cgg) -> W(Tgg) FT EDITING : 46 P(cCg) -> L(cTg) FT EDITING : 84 *(Taa) -> Q(Caa) FT EDITING : 189 P(cCt) -> L(cTt) FT EDITING : 192 S(tCg) -> L(tTg) FT EDITING : 275 L(Ctt) -> F(Ttt) FT EDITING : 311 S(tCc) -> F(tTc) FT EDITING : 345 R(Cgg) -> W(Tgg) FT EDITING : 409 S(tCa) -> L(tTa) FT EDITING : 439 S(tCa) -> L(tTa) FT EDITING : 440 S(tCa) -> L(tTa) FT EDITING : 473 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1557 NT; CD 1 atgaaattag ctCatCggat gtacgcggga cccgctcaca tcggtaccct CD 51 acgggtagcc agttccttca gaaacgtaca tgctataatg catgcccctt CD 101 taggagatga ttactttaac gtaatgcgtt ccatgcCgga aagggaaaga CD 151 gattttaccc cagtaactgc tagtgtagtg gatcgccacg tgttagcacg CD 201 tggatcccgg gataaggttg taagtaatat aagccgaaaa ggtgaggaaT CD 251 aacgccctga cttaattgta ttgacaccta cgtgtacctc tagtatccta CD 301 caagaagatt tacaaaattt tgtggataga gcttccctgt attctgagtc CD 351 cgacgtaatt ctcgccgatg tcaatcacta ccgagttaac gagcttcaag CD 401 cttcggataa aactttggaa caaatagttc gatattattt agatagggcc CD 451 cgcaaggaag gtatttttaa ccggtccctg acagatgttc cttcagccaa CD 501 tattatagga attctcaccc taggttttca caatcaacat gactgtcgcg CD 551 agttgaaacg tctacCtgga gaatCggggg tttcaattaa tcaaataatc CD 601 ccagaaggag agtttcttaa taatctcaag gatttgccaa gagcttggtt CD 651 taatatagtc ccttaccggg agataggttt gatggcagca agtttcttgg CD 701 agaaagaata tggaatgcct tatatatcaa caactccgat aggtatttca CD 751 aatacagccg acttcgtaat gcaggtggaa aaacttatga atttctgggc CD 801 tactgtatta ctgggaaaga aaCttcatta cgatcaatat gttgaaaatc CD 851 aaactaaatt tgtttctcaa gcagcttggt tttccaaatc tatcgattgc CD 901 caaaatttag ctggaaaaga agcagtggtt tCcggcgatg caactcacgc CD 951 cgcctcgatt accaagatac tctccggaga gatgggaatt cgtgtaagtt CD 1001 gttcaggcac gtattgcaag catgacgcgg gaCggtttaa tgagcaggtt CD 1051 cagggtttgt gtgatgaagt aataattaca gaagatcata ctgaagttgg CD 1101 ggatacgata gctcgtattg agccctctgc tatatttgga actcaaatgg CD 1151 agcgtcatat cggcaaacgt attgacatcc cgtgtggggt tatttcttca CD 1201 ccagttcata ttcagaattt tccttCagga tatcgaccct ttatgggtta CD 1251 cgagggaacg aatcaaatat cagatctaat atacaattca ttcaatctgg CD 1301 gtatggaaga tcactCatCa gacgtgtttg gaggacacga caccaagggg CD 1351 ataagcacca agtccctatc tacaggtgga aaatctattg attggacccc CD 1401 cgaagctgag tcggaacCaa agagaatccc tggttttgtg aggggaaaag CD 1451 taaaaaaaaa taccgaggtt tttgcaagac aaaacaatat tttgaaaatt CD 1501 acagttgatg taatgtatgc ggctaaagaa agaagatcga ttgagtcctt CD 1551 agcttag FT EDITED CDNA CD 1 atgaaattag ctTatTggat gtacgcggga cccgctcaca tcggtaccct CD 51 acgggtagcc agttccttca gaaacgtaca tgctataatg catgcccctt CD 101 taggagatga ttactttaac gtaatgcgtt ccatgcTgga aagggaaaga CD 151 gattttaccc cagtaactgc tagtgtagtg gatcgccacg tgttagcacg CD 201 tggatcccgg gataaggttg taagtaatat aagccgaaaa ggtgaggaaC CD 251 aacgccctga cttaattgta ttgacaccta cgtgtacctc tagtatccta CD 301 caagaagatt tacaaaattt tgtggataga gcttccctgt attctgagtc CD 351 cgacgtaatt ctcgccgatg tcaatcacta ccgagttaac gagcttcaag CD 401 cttcggataa aactttggaa caaatagttc gatattattt agatagggcc CD 451 cgcaaggaag gtatttttaa ccggtccctg acagatgttc cttcagccaa CD 501 tattatagga attctcaccc taggttttca caatcaacat gactgtcgcg CD 551 agttgaaacg tctacTtgga gaatTggggg tttcaattaa tcaaataatc CD 601 ccagaaggag agtttcttaa taatctcaag gatttgccaa gagcttggtt CD 651 taatatagtc ccttaccggg agataggttt gatggcagca agtttcttgg CD 701 agaaagaata tggaatgcct tatatatcaa caactccgat aggtatttca CD 751 aatacagccg acttcgtaat gcaggtggaa aaacttatga atttctgggc CD 801 tactgtatta ctgggaaaga aaTttcatta cgatcaatat gttgaaaatc CD 851 aaactaaatt tgtttctcaa gcagcttggt tttccaaatc tatcgattgc CD 901 caaaatttag ctggaaaaga agcagtggtt tTcggcgatg caactcacgc CD 951 cgcctcgatt accaagatac tctccggaga gatgggaatt cgtgtaagtt CD 1001 gttcaggcac gtattgcaag catgacgcgg gaTggtttaa tgagcaggtt CD 1051 cagggtttgt gtgatgaagt aataattaca gaagatcata ctgaagttgg CD 1101 ggatacgata gctcgtattg agccctctgc tatatttgga actcaaatgg CD 1151 agcgtcatat cggcaaacgt attgacatcc cgtgtggggt tatttcttca CD 1201 ccagttcata ttcagaattt tccttTagga tatcgaccct ttatgggtta CD 1251 cgagggaacg aatcaaatat cagatctaat atacaattca ttcaatctgg CD 1301 gtatggaaga tcactTatTa gacgtgtttg gaggacacga caccaagggg CD 1351 ataagcacca agtccctatc tacaggtgga aaatctattg attggacccc CD 1401 cgaagctgag tcggaacTaa agagaatccc tggttttgtg aggggaaaag CD 1451 taaaaaaaaa taccgaggtt tttgcaagac aaaacaatat tttgaaaatt CD 1501 acagttgatg taatgtatgc ggctaaagaa agaagatcga ttgagtcctt CD 1551 agcttag SQ SEQUENCE 519 AA; MKLAYWMYAG PAHIGTLRVA SSFRNVHAIM HAPLGDDYFN VMRSMLERER DFTPVTASVV DRHVLARGSR DKVVSNISRK GEEQRPDLIV LTPTCTSSIL QEDLQNFVDR ASLYSESDVI LADVNHYRVN ELQASDKTLE QIVRYYLDRA RKEGIFNRSL TDVPSANIIG ILTLGFHNQH DCRELKRLLG ELGVSINQII PEGEFLNNLK DLPRAWFNIV PYREIGLMAA SFLEKEYGMP YISTTPIGIS NTADFVMQVE KLMNFWATVL LGKKFHYDQY VENQTKFVSQ AAWFSKSIDC QNLAGKEAVV FGDATHAASI TKILSGEMGI RVSCSGTYCK HDAGWFNEQV QGLCDEVIIT EDHTEVGDTI ARIEPSAIFG TQMERHIGKR IDIPCGVISS PVHIQNFPLG YRPFMGYEGT NQISDLIYNS FNLGMEDHLL DVFGGHDTKG ISTKSLSTGG KSIDWTPEAE SELKRIPGFV RGKVKKNTEV FARQNNILKI TVDVMYAAKE RRSIESLA* // ID AY178864_9 STANDARD; PRT; 508 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : atpA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29377.2 FT PROTEIN_NAME : ATP synthase CF1 alpha chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 9744 - 11267 FT DIRECTIONS : negative FT EDITING : 18 I(atC) -> I(atT) FT EDITING : 57 S(tCC) -> F(tTT) FT EDITING : 66 S(tCg) -> L(tTg) FT EDITING : 68 P(cCg) -> L(cTg) FT EDITING : 78 T(aCg) -> M(aTg) FT EDITING : 130 S(tCg) -> L(tTg) FT EDITING : 186 P(cCa) -> L(cTa) FT EDITING : 294 H(Cac) -> Y(Tac) FT EDITING : 343 *(Taa) -> Q(Caa) FT EDITING : 344 T(aCa) -> I(aTa) FT EDITING : 391 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 1524 NT; CD 1 atggtaataa acattcaacc tgacgagatt ggcagcatca ttcgcaagca CD 51 aatCaaaggg tatgttccgg aaatgaaagt tgttaacatc ggtactgtgc CD 101 ttcaagtggg agacggaatc gcccgtattc acggacttga tgaagtaatg CD 151 gctggcgaat tggtggaatC Cgaagacggt acagttggca ttgcttCgaa CD 201 tcCggaatct gataatgttg gggctgtgct gaCgggtgat ggtctaacta CD 251 tacgagaagg gggttcagta cgggcaacgg gtaagattgc tcaaatacca CD 301 gtcagtgact cgtttttagg ccgcgttgta aatgcattgg cgcaacctat CD 351 cgatggaaaa ggacaaatcc cagcttctga gttcagatCg atagaatctt CD 401 ccgctccggg gattatttca agacgctccg tgtacgaacc cctacaaaca CD 451 ggtctgattg ctattgattc tatgattccc atcggtcgtg gccagcgaga CD 501 gttaattatt ggggatagac agactggcaa aacggcagta gctacagata CD 551 cgattcCaaa tcagaaaggt caaaatgtca tatgtgttta tgtagctatt CD 601 ggccaaaagg cttcatctgt ggctcaagta gttgacacct ttcgggaacg CD 651 tggcgccctg gaatacacca tcgtagtctc ggaaactgca aactctccag CD 701 ccactttgca atacctcgcg ccttacacag gggcagctct agccgaatac CD 751 ttcatgtatc gcaaacagca tactttgatt atctacgacg atctctctaa CD 801 acaagctcaa gcttatcgac agatgtcttt attattgaaa cgcccgcccg CD 851 ggcgagaagc gtatccggga gatgtttttC acttacattc ccgcctcttg CD 901 gagagggccg ctaaattgag tacccaatta ggggagggca gtatgacagc CD 951 tttacccatc gttgagacac aggcaggaga tgtctcggct tacattccta CD 1001 ccaatgttat ttctattacc gatggaTaaa Catttctatc agcagattta CD 1051 tttaacgccg ggattcgacc ggcaattaat gtgggtatct ctgtatctag CD 1101 ggtaggctct gcagctcaaa ttaaagcaat gaaacaagta gccggtaaat CD 1151 tgaaattgga attggcacaa tCtgcagaat tggaggcttt cgcgcaattt CD 1201 gcttccgatc tcgataaaac tactcaaaat caattagcta gaggacaacg CD 1251 cttgcgcgag cttctcaaac aatctcagtc agccccatta gcggtggaag CD 1301 aacaagtagc taccatttac accggagtta acggatattt agatgtttta CD 1351 gatgttgaac aagtaaaacg gttcctggtt cagctacggg aatatgtagc CD 1401 aacgagtaaa cctagttttg gggaaattat tcgttctaca aaggtgttta CD 1451 cggaacaagc ggaagccctt ttgaaagaag caattaagga atcaacggaa CD 1501 ctttttttac tgcaagagag atga FT EDITED CDNA CD 1 atggtaataa acattcaacc tgacgagatt ggcagcatca ttcgcaagca CD 51 aatTaaaggg tatgttccgg aaatgaaagt tgttaacatc ggtactgtgc CD 101 ttcaagtggg agacggaatc gcccgtattc acggacttga tgaagtaatg CD 151 gctggcgaat tggtggaatT Tgaagacggt acagttggca ttgcttTgaa CD 201 tcTggaatct gataatgttg gggctgtgct gaTgggtgat ggtctaacta CD 251 tacgagaagg gggttcagta cgggcaacgg gtaagattgc tcaaatacca CD 301 gtcagtgact cgtttttagg ccgcgttgta aatgcattgg cgcaacctat CD 351 cgatggaaaa ggacaaatcc cagcttctga gttcagatTg atagaatctt CD 401 ccgctccggg gattatttca agacgctccg tgtacgaacc cctacaaaca CD 451 ggtctgattg ctattgattc tatgattccc atcggtcgtg gccagcgaga CD 501 gttaattatt ggggatagac agactggcaa aacggcagta gctacagata CD 551 cgattcTaaa tcagaaaggt caaaatgtca tatgtgttta tgtagctatt CD 601 ggccaaaagg cttcatctgt ggctcaagta gttgacacct ttcgggaacg CD 651 tggcgccctg gaatacacca tcgtagtctc ggaaactgca aactctccag CD 701 ccactttgca atacctcgcg ccttacacag gggcagctct agccgaatac CD 751 ttcatgtatc gcaaacagca tactttgatt atctacgacg atctctctaa CD 801 acaagctcaa gcttatcgac agatgtcttt attattgaaa cgcccgcccg CD 851 ggcgagaagc gtatccggga gatgtttttT acttacattc ccgcctcttg CD 901 gagagggccg ctaaattgag tacccaatta ggggagggca gtatgacagc CD 951 tttacccatc gttgagacac aggcaggaga tgtctcggct tacattccta CD 1001 ccaatgttat ttctattacc gatggaCaaa Tatttctatc agcagattta CD 1051 tttaacgccg ggattcgacc ggcaattaat gtgggtatct ctgtatctag CD 1101 ggtaggctct gcagctcaaa ttaaagcaat gaaacaagta gccggtaaat CD 1151 tgaaattgga attggcacaa tTtgcagaat tggaggcttt cgcgcaattt CD 1201 gcttccgatc tcgataaaac tactcaaaat caattagcta gaggacaacg CD 1251 cttgcgcgag cttctcaaac aatctcagtc agccccatta gcggtggaag CD 1301 aacaagtagc taccatttac accggagtta acggatattt agatgtttta CD 1351 gatgttgaac aagtaaaacg gttcctggtt cagctacggg aatatgtagc CD 1401 aacgagtaaa cctagttttg gggaaattat tcgttctaca aaggtgttta CD 1451 cggaacaagc ggaagccctt ttgaaagaag caattaagga atcaacggaa CD 1501 ctttttttac tgcaagagag atga SQ SEQUENCE 508 AA; MVINIQPDEI GSIIRKQIKG YVPEMKVVNI GTVLQVGDGI ARIHGLDEVM AGELVEFEDG TVGIALNLES DNVGAVLMGD GLTIREGGSV RATGKIAQIP VSDSFLGRVV NALAQPIDGK GQIPASEFRL IESSAPGIIS RRSVYEPLQT GLIAIDSMIP IGRGQRELII GDRQTGKTAV ATDTILNQKG QNVICVYVAI GQKASSVAQV VDTFRERGAL EYTIVVSETA NSPATLQYLA PYTGAALAEY FMYRKQHTLI IYDDLSKQAQ AYRQMSLLLK RPPGREAYPG DVFYLHSRLL ERAAKLSTQL GEGSMTALPI VETQAGDVSA YIPTNVISIT DGQIFLSADL FNAGIRPAIN VGISVSRVGS AAQIKAMKQV AGKLKLELAQ FAELEAFAQF ASDLDKTTQN QLARGQRLRE LLKQSQSAPL AVEEQVATIY TGVNGYLDVL DVEQVKRFLV QLREYVATSK PSFGEIIRST KVFTEQAEAL LKEAIKESTE LFLLQER* // ID AY178864_10 STANDARD; PRT; 185 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : atpF FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29378.2 FT PROTEIN_NAME : ATP synthase CF0 B chain FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 49/1 FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 555 NT; CD 1 aCgagaagtc taagtgagat catcgctccc tcgagttatt ggaccctcgc CD 51 tggaactatt gggctaaata ctaatatatt tgagataaac ctaattaact CD 101 taatcctggt actaggtata ttattttatt acggaaaggg ggtgttgatc CD 151 aatttattag aaaatcgtga aaggacaatt ttgaacacga ttcaagatgc CD 201 ggaagagcgc cacaaagaag cgactgaaaa acttcagaga gctcgtcttc CD 251 gattgcaaca agcggaaatg aaagcggacg agattcgcat tattggactt CD 301 acgaaaatgg atagggaacg gcgagatctc gttgatgcag ctgacaatga CD 351 tttaagggaa cttgaagaga gtaaaaatta tgcaattcgt tttgagaagc CD 401 aacgagcaat tgagcaggtt cgacagcaag tttctcgact agcctccgaa CD 451 agggctttcg aaagcttgaa cggtcgtcta actaatgaat ttcagctacg CD 501 aatgattgat taccacatcg gcttgctcag agccatggct aacaaatcca CD 551 cgtaa FT EDITED CDNA CD 1 aTgagaagtc taagtgagat catcgctccc tcgagttatt ggaccctcgc CD 51 tggaactatt gggctaaata ctaatatatt tgagataaac ctaattaact CD 101 taatcctggt actaggtata ttattttatt acggaaaggg ggtgttgatc CD 151 aatttattag aaaatcgtga aaggacaatt ttgaacacga ttcaagatgc CD 201 ggaagagcgc cacaaagaag cgactgaaaa acttcagaga gctcgtcttc CD 251 gattgcaaca agcggaaatg aaagcggacg agattcgcat tattggactt CD 301 acgaaaatgg atagggaacg gcgagatctc gttgatgcag ctgacaatga CD 351 tttaagggaa cttgaagaga gtaaaaatta tgcaattcgt tttgagaagc CD 401 aacgagcaat tgagcaggtt cgacagcaag tttctcgact agcctccgaa CD 451 agggctttcg aaagcttgaa cggtcgtcta actaatgaat ttcagctacg CD 501 aatgattgat taccacatcg gcttgctcag agccatggct aacaaatcca CD 551 cgtaa SQ SEQUENCE 185 AA; MRSLSEIIAP SSYWTLAGTI GLNTNIFEIN LINLILVLGI LFYYGKGVLI NLLENRERTI LNTIQDAEER HKEATEKLQR ARLRLQQAEM KADEIRIIGL TKMDRERRDL VDAADNDLRE LEESKNYAIR FEKQRAIEQV RQQVSRLASE RAFESLNGRL TNEFQLRMID YHIGLLRAMA NKST* // ID AY178864_11 STANDARD; PRT; 82 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : atpH FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29379.2 FT PROTEIN_NAME : ATP synthase CF0 C chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 12947 - 13192 FT DIRECTIONS : negative FT EDITING : 57 S(tCg) -> L(tTg) FT EDITING : 68 S(tCa) -> L(tTa) FT EDITING : 72 P(cCa) -> L(cTa) FT EDITING : 74 P(cCg) -> L(cTg) FT EDITING : 75 S(tCa) -> L(tTa) FT EDITING : 80 P(CCt) -> F(TTt) FT CODON_START : 1 CL CDNALEN 246 NT; CD 1 atgaatccat tgatttctgc cgcttccgtc atcgccgctg ggttagctgt CD 51 aggccttgct tcaatcggac ccggtgttgg tcaaggcact gccgcgggtc CD 101 aggcggtcga gggtatagca agacagccag aagcagaagg taaaatacga CD 151 ggcactttat tgttaagttC ggctttcatg gaagctttga caatttatgg CD 201 atCagttgta gctcCagccc CgtCatttgc aaatccgCCt gtctaa FT EDITED CDNA CD 1 atgaatccat tgatttctgc cgcttccgtc atcgccgctg ggttagctgt CD 51 aggccttgct tcaatcggac ccggtgttgg tcaaggcact gccgcgggtc CD 101 aggcggtcga gggtatagca agacagccag aagcagaagg taaaatacga CD 151 ggcactttat tgttaagttT ggctttcatg gaagctttga caatttatgg CD 201 atTagttgta gctcTagccc TgtTatttgc aaatccgTTt gtctaa SQ SEQUENCE 82 AA; MNPLISAASV IAAGLAVGLA SIGPGVGQGT AAGQAVEGIA RQPEAEGKIR GTLLLSLAFM EALTIYGLVV ALALLFANPF V* // ID AY178864_12 STANDARD; PRT; 249 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : atpI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29380.2 FT PROTEIN_NAME : ATP synthase CF0 A chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 14002 - 14748 FT DIRECTIONS : negative FT EDITING : 14 P(cCg) -> L(cTg) FT EDITING : 24 *(Taa) -> Q(Caa) FT EDITING : 78 S(tCt) -> F(tTt) FT EDITING : 82 S(tCa) -> L(tTa) FT EDITING : 104 P(cCa) -> L(cTa) FT EDITING : 149 H(Cat) -> Y(Tat) FT EDITING : 162 S(tCC) -> F(tTT) FT EDITING : 181 S(tCc) -> F(tTc) FT EDITING : 205 P(cCc) -> L(cTc) FT EDITING : 217 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 747 NT; CD 1 atgcaaattg aacaattgca aattaatgaa attgataatc Cgcatcaagt CD 51 atcaagtgta gaagtaggtT aacatctcta ttggcaaata ggaaactttc CD 101 aagttcatgc acaggttctt ataacttctt gggttgtcgt cgccatattg CD 151 gtagctttac ccgctacaac taccggcaat ttgcaatcga taccaactgg CD 201 tacacaaaat tttatcgagt atgttcttga atCtattcga gattCaacca CD 251 ggacccagat gggggaagag ggatatcgac cctgggtccc atttattgga CD 301 acaatgtttc Catttatttt tgcttctaac tggtcaggtg ctttgctacc CD 351 ctggcgagtc attcagttac ctcatgggga gttggctgca cctacgaacg CD 401 atattaacac caccgttgca ttagccttgc ttacatcagt agcaCatttt CD 451 tacgcgggtt tgtacaagag agggtttagc tattCCggca aatacataca CD 501 gccaactccg atactcctac ctatcaatat tttggaagac tCcaccaaac CD 551 ccctatcgct tagtttccga ttgtttggaa acattttggc tgacgagttg CD 601 gtagtagctg ttcCcgtctc cctagtaccc ctaattgtcc ctgtacctaC CD 651 gatgcttttg ggattgttta caagtggcat ccaagcttta atctttgcca CD 701 ctttagctgc agcttatatc ggggaatcta tggaaggtca tcattag FT EDITED CDNA CD 1 atgcaaattg aacaattgca aattaatgaa attgataatc Tgcatcaagt CD 51 atcaagtgta gaagtaggtC aacatctcta ttggcaaata ggaaactttc CD 101 aagttcatgc acaggttctt ataacttctt gggttgtcgt cgccatattg CD 151 gtagctttac ccgctacaac taccggcaat ttgcaatcga taccaactgg CD 201 tacacaaaat tttatcgagt atgttcttga atTtattcga gattTaacca CD 251 ggacccagat gggggaagag ggatatcgac cctgggtccc atttattgga CD 301 acaatgtttc Tatttatttt tgcttctaac tggtcaggtg ctttgctacc CD 351 ctggcgagtc attcagttac ctcatgggga gttggctgca cctacgaacg CD 401 atattaacac caccgttgca ttagccttgc ttacatcagt agcaTatttt CD 451 tacgcgggtt tgtacaagag agggtttagc tattTTggca aatacataca CD 501 gccaactccg atactcctac ctatcaatat tttggaagac tTcaccaaac CD 551 ccctatcgct tagtttccga ttgtttggaa acattttggc tgacgagttg CD 601 gtagtagctg ttcTcgtctc cctagtaccc ctaattgtcc ctgtacctaT CD 651 gatgcttttg ggattgttta caagtggcat ccaagcttta atctttgcca CD 701 ctttagctgc agcttatatc ggggaatcta tggaaggtca tcattag SQ SEQUENCE 249 AA; MQIEQLQINE IDNLHQVSSV EVGQHLYWQI GNFQVHAQVL ITSWVVVAIL VALPATTTGN LQSIPTGTQN FIEYVLEFIR DLTRTQMGEE GYRPWVPFIG TMFLFIFASN WSGALLPWRV IQLPHGELAA PTNDINTTVA LALLTSVAYF YAGLYKRGFS YFGKYIQPTP ILLPINILED FTKPLSLSFR LFGNILADEL VVAVLVSLVP LIVPVPMMLL GLFTSGIQAL IFATLAAAYI GESMEGHH* // ID AY178864_13 STANDARD; PRT; 236 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29381.3 FT PROTEIN_NAME : ribosomal protein S2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 14955 - 15662 FT DIRECTIONS : negative FT EDITING : 6 R(Cgg) -> W(Tgg) FT EDITING : 60 S(tCg) -> L(tTg) FT EDITING : 72 P(CCg) -> L(TTg) FT EDITING : 144 *(Taa) -> Q(Caa) FT EDITING : 161 S(tCa) -> L(tTa) FT EDITING : 173 *(Taa) -> Q(Caa) FT EDITING : 183 P(cCg) -> L(cTg) FT EDITING : 221 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 708 NT; CD 1 atgcaacaga aaaatCggac tatcgacttg gaaggaatga tggcagcagg CD 51 aattcacttt ggacatcaaa cccagagatg gaatccaaag atgtctcctt CD 101 atatatttac agaacgtaag ggtgttcata ttctcgactt aactcagacc CD 151 gctcgtctcc tatctgaagc ttgtgactCg gtatttgatg cagcagtaga CD 201 gggaaaggag ttcCCgatgg tgggtacgaa gaatcaagta actgatttaa CD 251 tagtatcagc tgcattgaaa tctcaatgcc attatgtaaa cgagaaatgg CD 301 ttagctggta cgttaacgaa ttgggtcact acagagacac gtctccgcag CD 351 gtttcaacac ttacaaactg ggggcgattt gggagaattc gaccgacttc CD 401 cgaaacggga ggccgcgatt ttgaagggaT aattggttag attaaaaaag CD 451 tgtctaggtg gaattcaata tatgtcagat tCacccgata ttgcgataat CD 501 taccgatcaa cacgaaTaat ctattgccct caaagaatgc agtattcCgg CD 551 gtattcccac aatctgtatc gttgatacag attgtgaccc agatcttgta CD 601 gatgttccaa ttcctggtaa tgatgatgct agatcctcga tccgatggat CD 651 attggataaa cCtgcattag ctattagcga gggtcgttca aacataaagg CD 701 taacttaa FT EDITED CDNA CD 1 atgcaacaga aaaatTggac tatcgacttg gaaggaatga tggcagcagg CD 51 aattcacttt ggacatcaaa cccagagatg gaatccaaag atgtctcctt CD 101 atatatttac agaacgtaag ggtgttcata ttctcgactt aactcagacc CD 151 gctcgtctcc tatctgaagc ttgtgactTg gtatttgatg cagcagtaga CD 201 gggaaaggag ttcTTgatgg tgggtacgaa gaatcaagta actgatttaa CD 251 tagtatcagc tgcattgaaa tctcaatgcc attatgtaaa cgagaaatgg CD 301 ttagctggta cgttaacgaa ttgggtcact acagagacac gtctccgcag CD 351 gtttcaacac ttacaaactg ggggcgattt gggagaattc gaccgacttc CD 401 cgaaacggga ggccgcgatt ttgaagggaC aattggttag attaaaaaag CD 451 tgtctaggtg gaattcaata tatgtcagat tTacccgata ttgcgataat CD 501 taccgatcaa cacgaaCaat ctattgccct caaagaatgc agtattcTgg CD 551 gtattcccac aatctgtatc gttgatacag attgtgaccc agatcttgta CD 601 gatgttccaa ttcctggtaa tgatgatgct agatcctcga tccgatggat CD 651 attggataaa cTtgcattag ctattagcga gggtcgttca aacataaagg CD 701 taacttaa SQ SEQUENCE 236 AA; MQQKNWTIDL EGMMAAGIHF GHQTQRWNPK MSPYIFTERK GVHILDLTQT ARLLSEACDL VFDAAVEGKE FLMVGTKNQV TDLIVSAALK SQCHYVNEKW LAGTLTNWVT TETRLRRFQH LQTGGDLGEF DRLPKREAAI LKGQLVRLKK CLGGIQYMSD LPDIAIITDQ HEQSIALKEC SILGIPTICI VDTDCDPDLV DVPIPGNDDA RSSIRWILDK LALAISEGRS NIKVT* // ID AY178864_14 STANDARD; PRT; 1421 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpoC2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29382.2 FT PROTEIN_NAME : RNA polymerase beta'' chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 15784 - 20046 FT DIRECTIONS : negative FT EDITING : 39 S(tCa) -> L(tTa) FT EDITING : 57 S(tCg) -> L(tTg) FT EDITING : 78 *(Taa) -> Q(Caa) FT EDITING : 182 R(Cgc) -> C(Tgc) FT EDITING : 300 R(Cgg) -> W(Tgg) FT EDITING : 339 S(tCg) -> L(tTg) FT EDITING : 659 P(cCg) -> L(cTg) FT EDITING : 768 P(cCg) -> L(cTg) FT EDITING : 1099 P(cCg) -> L(cTg) FT EDITING : 1253 C(Tgc) -> R(Cgc) FT CODON_START : 1 CL CDNALEN 4263 NT; CD 1 atgatggatc gaaatgaatt acctttctgc aacaagacga tcgatagggc CD 51 tgcgatgaag agactcatcg gcaagttagt tgtttgtttc ggaattgcgt CD 101 ctacaacaaa tatctCagat caagtgaaag ttttgggttt tcagcaagct CD 151 acagaagcat ctatctcatC gggtattgac gacctttcag cagtaccaac CD 201 cagaggttgg cttgtacgag acgcggagaa aTaaggttac gtctcggagg CD 251 ggcattaccg ctgcggaagt ctgcatgcca tagaaaagtt gcgtcaatca CD 301 attgaagcct ggtatgccac aagtgaatgt ttgaaacgag aaatgagtcc CD 351 aagtttcaag atgattgatc ctttgaatcc cgttcacatg atgtctgttt CD 401 caggagcccg agggaccatc tcccaggtcc accaattgct tggcatgagg CD 451 ggattaatgg cagatcctcg aggtcaggta attgacctac ctatccgaag CD 501 aaatctgcgc gaaggtttat ccctgacaga atatattatt tctCgctacg CD 551 gtgctcgcaa aggggttgtg gataccgccg tgcgaacttc agatgccgga CD 601 tacctaacac gtagacttgt cgaagttgtt caacatattg ctgtacgaag CD 651 aagggattgt gaaactccta gaagtctcgc ttttttgact tcaaatactg CD 701 gcgaacgaag acgaggattt cttggcacga tgccgcatca gggattggtt CD 751 ggacgtgtgt tggcggatca tgtttactgg gatgttagat gtattgccac CD 801 ccgtaaccaa gatattagcg acggattggc tagtaacttg atggcgtcct CD 851 cgcagccaat acatgtgaga tctcctttga catgcaaaag cattttcCgg CD 901 atttgtcagt tctgctacgg ttggagcctt gcccattgca atttagtaga CD 951 attgggtgaa gccgttggta tcattgcggg tcaatcaatt ggagaaccgg CD 1001 gaactcaatt gacatCgagg acttttcata caggtggggt atttacaggg CD 1051 gatattgcgg agtacgtacg aattccattc aatggactta ttaaatttga CD 1101 cgaaagatta cttcatccga cccgtacgag gcacgggcat cctgcttgga CD 1151 tgtgccgaaa cgatttaccc ctctttattg gcaattccgt cggtacacaa CD 1201 aattctctta ttccagccca gagtctgctt atgattcgaa ctggtcaata CD 1251 tgttgagtcg caacaagtta tcgcggaagt acgagccaag gagtttcctc CD 1301 ccaaagaatg tattagaaaa cctatttatc caaactcgag gggagaaatt CD 1351 cactggagta aatttgtttg gcatgtccgt gattccatct gcaatatcgc CD 1401 tcgtctcgta cgagaggcga gccatatatg gattctttcg ggatctccat CD 1451 ccaaatttga tgggaactct ttttttcata aagatcaaga tagagttagg CD 1501 ataaaacccc accctatcaa aaggatacgc agtcactcgg agggaatttt CD 1551 tgaagcacaa gccagtgcta gtaactgcgt agatcgtcga aaagggattc CD 1601 aagaatttgg aaccgattca aaatattttt caaattggtc aaaacgtccg CD 1651 agatccaatt acatcctttc aaatgtctgg ttggagcggg ccgagctaga CD 1701 aaactcggtt tctttgctga tggaacgatg ccaaaaaaat atcaaaaaat CD 1751 tagattttgt aagtatcaat gttcaattaa acaatggttc ggatcaggat CD 1801 cacatttttg ccacctatga aaacttcgag tatcaaacca tcgtttcagg CD 1851 gatcataaag tatggcactg tagaaattaa accggtcaat ccgaagagac CD 1901 tccagttaga tggtgggaca gggaataaaa gttctcgtcc ttggtgcagg CD 1951 gtagttagaa aaggaaattt cttccCgatt ccagaagagg tttatcttac CD 2001 gcacgaaccc tcgtcgtcta ttttggtgac aaataatgct attgttaaaa CD 2051 aaggtgcgca aatcactaac aatattatta ccaaatcagg tggattgatt CD 2101 cggatgagaa agagatcaag agatgctact acaataagaa ttctccctgg CD 2151 atatatttat aatccagaga agcaaattaa tatatccaag cggggtaata CD 2201 cattactagc gccgggtaat aggatttcgg atgacattga agtcaaaaat CD 2251 tggatttacc tacaaccatt tacatttcgc agaaaaggaa aaacctttgt CD 2301 ccCgatgaca ccagttagcg agtataactt atccagcgat tctctggcac CD 2351 aagtagcatc tcgatttgac aaaccaaaaa cacagagacg cgcaaaagcc CD 2401 aagacccttt cgttcatttg ttgcaaaaat ggggaaaaaa ttgaagtaat CD 2451 taacgatgtg cctactcaat tagttcggct ttgtttgata attgaatggc CD 2501 agaaatattt gcacgaaacc cttcctagaa aaagaaacta tttctctctt CD 2551 atcagtgtga aaataagtta tttgttcaaa acttttcttc aagtaaatcc CD 2601 gatggtatct ccccctacac aaagaggagt cagggttgat gaaatctttc CD 2651 gaacatcaac gcctcttggc aaaccatctc ctcctcaact tgatctggct CD 2701 aacagttgtt gtaaatcagc tgtcaactgt cagggtatca ttcatttgac CD 2751 tttggaacca gccacatcat tcctgatctt gtcgccattt aatttgtccc CD 2801 gtaataattc agttactgat acgagggatg gtggttgcgg aggagaaatt CD 2851 gggaaatact tctacgggtc agaagatggt ttcttctgca tcggcgagaa CD 2901 taaaaaaaag atctcactga gttctaaatg tatttcagaa aattatgcaa CD 2951 atccaaatgt tgaagaggga tggattaaag ctagaagagc aagttccaat CD 3001 ctcggccaga ggaaagctga ggaggtaggt ctagtgggga ctttgtcccc CD 3051 tatttcttgt tcatcgattc cccatcatct atcactcggc ggcaaaaacc CD 3101 tttctaccag aaaaggtttc gttgattatt cgatagataa gtcggaacat CD 3151 caagatttct atctgattga tgaaagtaaa ttactactga aatgccccat CD 3201 aaatttttat gttaaaaaag gtttcttgga caaaccttct tatttaccga CD 3251 caagagtgtt tagtcgagaa atcatgttaa ttagtctagg actacCgatc CD 3301 agtgaaagtc gatatctaca tcgagatcgg acatgtttcc aatctggcca CD 3351 ggtcatggcc attcaccaag attattcatt agtgagaacg ggtaaaacct CD 3401 ttttggcaac ccggggagca aatccccata agagttccgg ggatatcctt CD 3451 gaggaaggag atacgttaat aacattgccg tatgacagat tgaaatctgg CD 3501 agacattact caaggtctcc caaaggttga gcaactcctg gagtcccgtt CD 3551 ccattgcttc tatttcagca ggaattggag atctttttga gaaatggtgt CD 3601 caaaatatta ctaaattaat tgggaatccc tggagtcact tgctaggtgc CD 3651 tggaagaagt atggagcatt gccaattgat tctaattgat caaattcgaa CD 3701 aagtttatga gtctcaagga gtacggatat gcgacaagca tctagaaatt CD 3751 attgtcTgcc aattgacatc tagggtcgta gcgtctgaag atggggtaac CD 3801 taatgtattc cttcctgggg agcttgttga gttatcacag gcggaacgta CD 3851 taaatcgtgt tttaaagaaa tcaatttttt acgagcctat tgtattgggt CD 3901 atgacgaggg cttctcttag tactactagt tttttggcgg aagcaagttt CD 3951 tcaagaaacc actcgagtat tggctaaagc tgcccttcgc ggccgaattg CD 4001 attggctgaa ggggttgaaa gaaaatgttg ttattggcga ctccgttccc CD 4051 gtcggaacag gtagtccaga aatctattgt caattaaata taaataaaga CD 4101 gaaagaatct cgtttggcaa gtgggggtag taagaagttg acaaaatggg CD 4151 agactggaag tagtctaagt ggttaccata aaaaacggga tttcaatccc CD 4201 agttttttca ttcgtaaaga attgaataga tctttcactc gtcttcatct CD 4251 tgatatgtgg taa FT EDITED CDNA CD 1 atgatggatc gaaatgaatt acctttctgc aacaagacga tcgatagggc CD 51 tgcgatgaag agactcatcg gcaagttagt tgtttgtttc ggaattgcgt CD 101 ctacaacaaa tatctTagat caagtgaaag ttttgggttt tcagcaagct CD 151 acagaagcat ctatctcatT gggtattgac gacctttcag cagtaccaac CD 201 cagaggttgg cttgtacgag acgcggagaa aCaaggttac gtctcggagg CD 251 ggcattaccg ctgcggaagt ctgcatgcca tagaaaagtt gcgtcaatca CD 301 attgaagcct ggtatgccac aagtgaatgt ttgaaacgag aaatgagtcc CD 351 aagtttcaag atgattgatc ctttgaatcc cgttcacatg atgtctgttt CD 401 caggagcccg agggaccatc tcccaggtcc accaattgct tggcatgagg CD 451 ggattaatgg cagatcctcg aggtcaggta attgacctac ctatccgaag CD 501 aaatctgcgc gaaggtttat ccctgacaga atatattatt tctTgctacg CD 551 gtgctcgcaa aggggttgtg gataccgccg tgcgaacttc agatgccgga CD 601 tacctaacac gtagacttgt cgaagttgtt caacatattg ctgtacgaag CD 651 aagggattgt gaaactccta gaagtctcgc ttttttgact tcaaatactg CD 701 gcgaacgaag acgaggattt cttggcacga tgccgcatca gggattggtt CD 751 ggacgtgtgt tggcggatca tgtttactgg gatgttagat gtattgccac CD 801 ccgtaaccaa gatattagcg acggattggc tagtaacttg atggcgtcct CD 851 cgcagccaat acatgtgaga tctcctttga catgcaaaag cattttcTgg CD 901 atttgtcagt tctgctacgg ttggagcctt gcccattgca atttagtaga CD 951 attgggtgaa gccgttggta tcattgcggg tcaatcaatt ggagaaccgg CD 1001 gaactcaatt gacatTgagg acttttcata caggtggggt atttacaggg CD 1051 gatattgcgg agtacgtacg aattccattc aatggactta ttaaatttga CD 1101 cgaaagatta cttcatccga cccgtacgag gcacgggcat cctgcttgga CD 1151 tgtgccgaaa cgatttaccc ctctttattg gcaattccgt cggtacacaa CD 1201 aattctctta ttccagccca gagtctgctt atgattcgaa ctggtcaata CD 1251 tgttgagtcg caacaagtta tcgcggaagt acgagccaag gagtttcctc CD 1301 ccaaagaatg tattagaaaa cctatttatc caaactcgag gggagaaatt CD 1351 cactggagta aatttgtttg gcatgtccgt gattccatct gcaatatcgc CD 1401 tcgtctcgta cgagaggcga gccatatatg gattctttcg ggatctccat CD 1451 ccaaatttga tgggaactct ttttttcata aagatcaaga tagagttagg CD 1501 ataaaacccc accctatcaa aaggatacgc agtcactcgg agggaatttt CD 1551 tgaagcacaa gccagtgcta gtaactgcgt agatcgtcga aaagggattc CD 1601 aagaatttgg aaccgattca aaatattttt caaattggtc aaaacgtccg CD 1651 agatccaatt acatcctttc aaatgtctgg ttggagcggg ccgagctaga CD 1701 aaactcggtt tctttgctga tggaacgatg ccaaaaaaat atcaaaaaat CD 1751 tagattttgt aagtatcaat gttcaattaa acaatggttc ggatcaggat CD 1801 cacatttttg ccacctatga aaacttcgag tatcaaacca tcgtttcagg CD 1851 gatcataaag tatggcactg tagaaattaa accggtcaat ccgaagagac CD 1901 tccagttaga tggtgggaca gggaataaaa gttctcgtcc ttggtgcagg CD 1951 gtagttagaa aaggaaattt cttccTgatt ccagaagagg tttatcttac CD 2001 gcacgaaccc tcgtcgtcta ttttggtgac aaataatgct attgttaaaa CD 2051 aaggtgcgca aatcactaac aatattatta ccaaatcagg tggattgatt CD 2101 cggatgagaa agagatcaag agatgctact acaataagaa ttctccctgg CD 2151 atatatttat aatccagaga agcaaattaa tatatccaag cggggtaata CD 2201 cattactagc gccgggtaat aggatttcgg atgacattga agtcaaaaat CD 2251 tggatttacc tacaaccatt tacatttcgc agaaaaggaa aaacctttgt CD 2301 ccTgatgaca ccagttagcg agtataactt atccagcgat tctctggcac CD 2351 aagtagcatc tcgatttgac aaaccaaaaa cacagagacg cgcaaaagcc CD 2401 aagacccttt cgttcatttg ttgcaaaaat ggggaaaaaa ttgaagtaat CD 2451 taacgatgtg cctactcaat tagttcggct ttgtttgata attgaatggc CD 2501 agaaatattt gcacgaaacc cttcctagaa aaagaaacta tttctctctt CD 2551 atcagtgtga aaataagtta tttgttcaaa acttttcttc aagtaaatcc CD 2601 gatggtatct ccccctacac aaagaggagt cagggttgat gaaatctttc CD 2651 gaacatcaac gcctcttggc aaaccatctc ctcctcaact tgatctggct CD 2701 aacagttgtt gtaaatcagc tgtcaactgt cagggtatca ttcatttgac CD 2751 tttggaacca gccacatcat tcctgatctt gtcgccattt aatttgtccc CD 2801 gtaataattc agttactgat acgagggatg gtggttgcgg aggagaaatt CD 2851 gggaaatact tctacgggtc agaagatggt ttcttctgca tcggcgagaa CD 2901 taaaaaaaag atctcactga gttctaaatg tatttcagaa aattatgcaa CD 2951 atccaaatgt tgaagaggga tggattaaag ctagaagagc aagttccaat CD 3001 ctcggccaga ggaaagctga ggaggtaggt ctagtgggga ctttgtcccc CD 3051 tatttcttgt tcatcgattc cccatcatct atcactcggc ggcaaaaacc CD 3101 tttctaccag aaaaggtttc gttgattatt cgatagataa gtcggaacat CD 3151 caagatttct atctgattga tgaaagtaaa ttactactga aatgccccat CD 3201 aaatttttat gttaaaaaag gtttcttgga caaaccttct tatttaccga CD 3251 caagagtgtt tagtcgagaa atcatgttaa ttagtctagg actacTgatc CD 3301 agtgaaagtc gatatctaca tcgagatcgg acatgtttcc aatctggcca CD 3351 ggtcatggcc attcaccaag attattcatt agtgagaacg ggtaaaacct CD 3401 ttttggcaac ccggggagca aatccccata agagttccgg ggatatcctt CD 3451 gaggaaggag atacgttaat aacattgccg tatgacagat tgaaatctgg CD 3501 agacattact caaggtctcc caaaggttga gcaactcctg gagtcccgtt CD 3551 ccattgcttc tatttcagca ggaattggag atctttttga gaaatggtgt CD 3601 caaaatatta ctaaattaat tgggaatccc tggagtcact tgctaggtgc CD 3651 tggaagaagt atggagcatt gccaattgat tctaattgat caaattcgaa CD 3701 aagtttatga gtctcaagga gtacggatat gcgacaagca tctagaaatt CD 3751 attgtcCgcc aattgacatc tagggtcgta gcgtctgaag atggggtaac CD 3801 taatgtattc cttcctgggg agcttgttga gttatcacag gcggaacgta CD 3851 taaatcgtgt tttaaagaaa tcaatttttt acgagcctat tgtattgggt CD 3901 atgacgaggg cttctcttag tactactagt tttttggcgg aagcaagttt CD 3951 tcaagaaacc actcgagtat tggctaaagc tgcccttcgc ggccgaattg CD 4001 attggctgaa ggggttgaaa gaaaatgttg ttattggcga ctccgttccc CD 4051 gtcggaacag gtagtccaga aatctattgt caattaaata taaataaaga CD 4101 gaaagaatct cgtttggcaa gtgggggtag taagaagttg acaaaatggg CD 4151 agactggaag tagtctaagt ggttaccata aaaaacggga tttcaatccc CD 4201 agttttttca ttcgtaaaga attgaataga tctttcactc gtcttcatct CD 4251 tgatatgtgg taa SQ SEQUENCE 1421 AA; MMDRNELPFC NKTIDRAAMK RLIGKLVVCF GIASTTNILD QVKVLGFQQA TEASISLGID DLSAVPTRGW LVRDAEKQGY VSEGHYRCGS LHAIEKLRQS IEAWYATSEC LKREMSPSFK MIDPLNPVHM MSVSGARGTI SQVHQLLGMR GLMADPRGQV IDLPIRRNLR EGLSLTEYII SCYGARKGVV DTAVRTSDAG YLTRRLVEVV QHIAVRRRDC ETPRSLAFLT SNTGERRRGF LGTMPHQGLV GRVLADHVYW DVRCIATRNQ DISDGLASNL MASSQPIHVR SPLTCKSIFW ICQFCYGWSL AHCNLVELGE AVGIIAGQSI GEPGTQLTLR TFHTGGVFTG DIAEYVRIPF NGLIKFDERL LHPTRTRHGH PAWMCRNDLP LFIGNSVGTQ NSLIPAQSLL MIRTGQYVES QQVIAEVRAK EFPPKECIRK PIYPNSRGEI HWSKFVWHVR DSICNIARLV REASHIWILS GSPSKFDGNS FFHKDQDRVR IKPHPIKRIR SHSEGIFEAQ ASASNCVDRR KGIQEFGTDS KYFSNWSKRP RSNYILSNVW LERAELENSV SLLMERCQKN IKKLDFVSIN VQLNNGSDQD HIFATYENFE YQTIVSGIIK YGTVEIKPVN PKRLQLDGGT GNKSSRPWCR VVRKGNFFLI PEEVYLTHEP SSSILVTNNA IVKKGAQITN NIITKSGGLI RMRKRSRDAT TIRILPGYIY NPEKQINISK RGNTLLAPGN RISDDIEVKN WIYLQPFTFR RKGKTFVLMT PVSEYNLSSD SLAQVASRFD KPKTQRRAKA KTLSFICCKN GEKIEVINDV PTQLVRLCLI IEWQKYLHET LPRKRNYFSL ISVKISYLFK TFLQVNPMVS PPTQRGVRVD EIFRTSTPLG KPSPPQLDLA NSCCKSAVNC QGIIHLTLEP ATSFLILSPF NLSRNNSVTD TRDGGCGGEI GKYFYGSEDG FFCIGENKKK ISLSSKCISE NYANPNVEEG WIKARRASSN LGQRKAEEVG LVGTLSPISC SSIPHHLSLG GKNLSTRKGF VDYSIDKSEH QDFYLIDESK LLLKCPINFY VKKGFLDKPS YLPTRVFSRE IMLISLGLLI SESRYLHRDR TCFQSGQVMA IHQDYSLVRT GKTFLATRGA NPHKSSGDIL EEGDTLITLP YDRLKSGDIT QGLPKVEQLL ESRSIASISA GIGDLFEKWC QNITKLIGNP WSHLLGAGRS MEHCQLILID QIRKVYESQG VRICDKHLEI IVRQLTSRVV ASEDGVTNVF LPGELVELSQ AERINRVLKK SIFYEPIVLG MTRASLSTTS FLAEASFQET TRVLAKAALR GRIDWLKGLK ENVVIGDSVP VGTGSPEIYC QLNINKEKES RLASGGSKKL TKWETGSSLS GYHKKRDFNP SFFIRKELNR SFTRLHLDMW * // ID AY178864_15 STANDARD; PRT; 695 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpoC1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29383.2 FT PROTEIN_NAME : RNA polymerase beta' chain FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 145/0 FT EDITING : 39 *(Taa) -> Q(Caa) FT EDITING : 43 S(tCg) -> L(tTg) FT EDITING : 55 S(tCa) -> L(tTa) FT EDITING : 56 S(tCt) -> F(tTt) FT EDITING : 140 P(cCa) -> L(cTa) FT EDITING : 283 Y(Tat) -> H(Cat) FT EDITING : 417 *(Tga) -> R(Cga) FT EDITING : 483 R(Cgt) -> C(Tgt) FT EDITING : 486 S(tCt) -> F(tTt) FT EDITING : 490 L(Ctt) -> F(Ttt) FT CODON_START : 1 CL CDNALEN 2085 NT; CD 1 atgattcatc gaactaatta tcaacaactt cggattggac tagcttctcc CD 51 cgaacagatt cgcagttggg ccgaaaggga gttacctaat ggagatgtca CD 101 ttggacaagt cgatTaacct tacacatCgc actataagac tcacaaacca CD 151 gagagagatg ggtCatCttg cgaaagaata tttgggccta caaaaagtgg CD 201 agtctgtgct tgcggaaact gccgatctgt caatgacgaa ggagagtctt CD 251 ccagattttg caagcattgc ggagtcgagt ttactgactc tcgagttcgt CD 301 agatatcgga tgggatacat caaactcgcg tgtccagtaa ctcacgtatg CD 351 gtttcttaaa cgaatcccta gttatattgc aaacctacta gccaaacctc CD 401 ttaaagaatt ggaaagccCa gtctattgcg atctttttct agctaggccc CD 451 gtggctgaaa ggcccgctct attaagactg cgggggctgt tcaattatga CD 501 ggatcgagcc tggagaaaca tacttcccac ttttttttct acccaaaatt CD 551 acgagatgct tcgaaaaaat gaaattgtta ctgggggaga tgctatcaga CD 601 gaaggattag ctagcttaga tttgcaaagt tttcttaatt gcgcgtattt CD 651 agagtggcag gcgtcagtaa aacagaagcc agttggaatc gaatgggaag CD 701 atcgaacaat tcgaagaaga aaagatcttc tgatcaggag gattaaacta CD 751 gccaaggatt ttttacggac gaatatgaaa cccgaatgga tggttttata CD 801 ttttataccg gttctcccgc ctgaattaag accaatagtg gaattgTatg CD 851 aaggtgaatt gattacctct gatcttaacg aactttatag gaagattatt CD 901 taccgaaata atactctcag agaattccta tcgggtagtg aatttacacc CD 951 ggaaggatta attgtttgcc aaaaacgact tgttcaagaa gctgtagatg CD 1001 ctctcatcgg tagtggtata cgtgggcaac caatgaggga tattcataat CD 1051 agaccctaca agtcattttc agaggttatt gagggcaagg agggtcgatt CD 1101 tagagaaaat ctactcggca agcgggtcga ttactcaggt cgctccgtaa CD 1151 ttgttgtcgg cccatctctt tcattacacc aatgtggatt acctcgagaa CD 1201 atggcaattg agcttttcca agcttttgta attcgcaatt tgattggaTg CD 1251 acaccttgcc tgtaatttac gagctgctaa gtgcatgata cggaagggga CD 1301 atcccataat atgggaagtt cttcgggaag ttatgcgagg ccatcctgta CD 1351 ctgctgaatc gggcacctac tttgcacaga ttaggcatac aggcgtttca CD 1401 gcccctcttg atagagggac gcgccattcg tctgcatcca ttggttCgtg CD 1451 gggggtCtaa cgcagatCtt gacggggatc agatggccgt tcatgtccct CD 1501 ttatctgtcg aagctcaaat cgaggctcgt cttctgatgt tttcgcatct CD 1551 caatttatta tctcccgcta cgggcgatcc cgtatctgta ccgagtcagg CD 1601 acatgcttct tggtctttat gcgctaacaa ttgaaagtag gcaaggaatc CD 1651 tatagaaata gacatcttgg ttttatagac agggttaacg tatattccac CD 1701 caaactactt catttcagca gttactgtga cttacttcgg gccaaggaat CD 1751 cgagacaagt ggattcccac agtctattgt ggcttcgatg gaaaatcgat CD 1801 ctgcaaatta ttagttcgaa aattcgtgaa ttatcttccg aatctcatta CD 1851 tgaatcgtca ggaacttctt ttcacttcta cgaaaattgc cgaattagaa CD 1901 aatgtaggga tggatctatc tctagtatgt atgtacttac aacagccggt CD 1951 cgcattttat tcaatcaaca attgaaggaa gcaatgcaag gtgtatcaaa CD 2001 gaattctttt tcatacacca cctcatctac gctgagtaca tcaacaatcg CD 2051 ataggtgtaa tactaatagt aataatgagg aatga FT EDITED CDNA CD 1 atgattcatc gaactaatta tcaacaactt cggattggac tagcttctcc CD 51 cgaacagatt cgcagttggg ccgaaaggga gttacctaat ggagatgtca CD 101 ttggacaagt cgatCaacct tacacatTgc actataagac tcacaaacca CD 151 gagagagatg ggtTatTttg cgaaagaata tttgggccta caaaaagtgg CD 201 agtctgtgct tgcggaaact gccgatctgt caatgacgaa ggagagtctt CD 251 ccagattttg caagcattgc ggagtcgagt ttactgactc tcgagttcgt CD 301 agatatcgga tgggatacat caaactcgcg tgtccagtaa ctcacgtatg CD 351 gtttcttaaa cgaatcccta gttatattgc aaacctacta gccaaacctc CD 401 ttaaagaatt ggaaagccTa gtctattgcg atctttttct agctaggccc CD 451 gtggctgaaa ggcccgctct attaagactg cgggggctgt tcaattatga CD 501 ggatcgagcc tggagaaaca tacttcccac ttttttttct acccaaaatt CD 551 acgagatgct tcgaaaaaat gaaattgtta ctgggggaga tgctatcaga CD 601 gaaggattag ctagcttaga tttgcaaagt tttcttaatt gcgcgtattt CD 651 agagtggcag gcgtcagtaa aacagaagcc agttggaatc gaatgggaag CD 701 atcgaacaat tcgaagaaga aaagatcttc tgatcaggag gattaaacta CD 751 gccaaggatt ttttacggac gaatatgaaa cccgaatgga tggttttata CD 801 ttttataccg gttctcccgc ctgaattaag accaatagtg gaattgCatg CD 851 aaggtgaatt gattacctct gatcttaacg aactttatag gaagattatt CD 901 taccgaaata atactctcag agaattccta tcgggtagtg aatttacacc CD 951 ggaaggatta attgtttgcc aaaaacgact tgttcaagaa gctgtagatg CD 1001 ctctcatcgg tagtggtata cgtgggcaac caatgaggga tattcataat CD 1051 agaccctaca agtcattttc agaggttatt gagggcaagg agggtcgatt CD 1101 tagagaaaat ctactcggca agcgggtcga ttactcaggt cgctccgtaa CD 1151 ttgttgtcgg cccatctctt tcattacacc aatgtggatt acctcgagaa CD 1201 atggcaattg agcttttcca agcttttgta attcgcaatt tgattggaCg CD 1251 acaccttgcc tgtaatttac gagctgctaa gtgcatgata cggaagggga CD 1301 atcccataat atgggaagtt cttcgggaag ttatgcgagg ccatcctgta CD 1351 ctgctgaatc gggcacctac tttgcacaga ttaggcatac aggcgtttca CD 1401 gcccctcttg atagagggac gcgccattcg tctgcatcca ttggttTgtg CD 1451 gggggtTtaa cgcagatTtt gacggggatc agatggccgt tcatgtccct CD 1501 ttatctgtcg aagctcaaat cgaggctcgt cttctgatgt tttcgcatct CD 1551 caatttatta tctcccgcta cgggcgatcc cgtatctgta ccgagtcagg CD 1601 acatgcttct tggtctttat gcgctaacaa ttgaaagtag gcaaggaatc CD 1651 tatagaaata gacatcttgg ttttatagac agggttaacg tatattccac CD 1701 caaactactt catttcagca gttactgtga cttacttcgg gccaaggaat CD 1751 cgagacaagt ggattcccac agtctattgt ggcttcgatg gaaaatcgat CD 1801 ctgcaaatta ttagttcgaa aattcgtgaa ttatcttccg aatctcatta CD 1851 tgaatcgtca ggaacttctt ttcacttcta cgaaaattgc cgaattagaa CD 1901 aatgtaggga tggatctatc tctagtatgt atgtacttac aacagccggt CD 1951 cgcattttat tcaatcaaca attgaaggaa gcaatgcaag gtgtatcaaa CD 2001 gaattctttt tcatacacca cctcatctac gctgagtaca tcaacaatcg CD 2051 ataggtgtaa tactaatagt aataatgagg aatga SQ SEQUENCE 695 AA; MIHRTNYQQL RIGLASPEQI RSWAERELPN GDVIGQVDQP YTLHYKTHKP ERDGLFCERI FGPTKSGVCA CGNCRSVNDE GESSRFCKHC GVEFTDSRVR RYRMGYIKLA CPVTHVWFLK RIPSYIANLL AKPLKELESL VYCDLFLARP VAERPALLRL RGLFNYEDRA WRNILPTFFS TQNYEMLRKN EIVTGGDAIR EGLASLDLQS FLNCAYLEWQ ASVKQKPVGI EWEDRTIRRR KDLLIRRIKL AKDFLRTNMK PEWMVLYFIP VLPPELRPIV ELHEGELITS DLNELYRKII YRNNTLREFL SGSEFTPEGL IVCQKRLVQE AVDALIGSGI RGQPMRDIHN RPYKSFSEVI EGKEGRFREN LLGKRVDYSG RSVIVVGPSL SLHQCGLPRE MAIELFQAFV IRNLIGRHLA CNLRAAKCMI RKGNPIIWEV LREVMRGHPV LLNRAPTLHR LGIQAFQPLL IEGRAIRLHP LVCGGFNADF DGDQMAVHVP LSVEAQIEAR LLMFSHLNLL SPATGDPVSV PSQDMLLGLY ALTIESRQGI YRNRHLGFID RVNVYSTKLL HFSSYCDLLR AKESRQVDSH SLLWLRWKID LQIISSKIRE LSSESHYESS GTSFHFYENC RIRKCRDGSI SSMYVLTTAG RILFNQQLKE AMQGVSKNSF SYTTSSTLST STIDRCNTNS NNEE* // ID AY178864_16 STANDARD; PRT; 1072 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpoB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29384.3 FT PROTEIN_NAME : RNA polymerase beta chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 23054 - 26269 FT DIRECTIONS : negative FT EDITING : 43 *(Tga) -> R(Cga) FT EDITING : 44 S(tCt) -> F(tTt) FT EDITING : 72 P(cCa) -> L(cTa) FT EDITING : 77 *(Taa) -> Q(Caa) FT EDITING : 142 A(gCa) -> V(gTa) FT EDITING : 215 A(gCa) -> V(gTa) FT EDITING : 240 *(Tag) -> Q(Cag) FT EDITING : 285 S(tCa) -> L(tTa) FT EDITING : 321 P(cCa) -> L(cTa) FT EDITING : 330 *(Taa) -> Q(Caa) FT EDITING : 540 T(aCg) -> M(aTg) FT EDITING : 729 S(tCa) -> L(tTa) FT EDITING : 759 S(tCa) -> L(tTa) FT EDITING : 787 T(aCt) -> I(aTt) FT EDITING : 879 S(tCa) -> L(tTa) FT EDITING : 905 P(cCt) -> L(cTt) FT EDITING : 994 S(tCg) -> L(tTg) FT EDITING : 1049 R(Cgt) -> C(Tgt) FT EDITING : 1060 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 3216 NT; CD 1 atgcccgtac tgccagaact tgcacaaatt caatttaaag gttttagtcg CD 51 tttcgttcat caaaaattgc ttaaggaact tgaaaatttc ccaaaaattg CD 101 aagatacaga taaggaagta gaattcTgat Ctattggaaa tcagtaccaa CD 151 ttgacagaac cttctctcga agagagagat gccgcgtatc aatgtattac CD 201 gtattccgct gaccCatatg taccagctTa attgatttgt aaggaagacc CD 251 aaatagtgca agaggaagat gtacgactcg gatctattcc ttggatgaat CD 301 tccggaggaa catttattat taatgggatc gctagagttt tagtcagtca CD 351 aatattgagg agtcctggta tttactacaa tcgggagtcg gatcagagag CD 401 ggattctcgc gtataccagc accgCaattt cagatcaggg agggagattt CD 451 aagctagaga tagacgggag gaatagaata tgggttcgta taagcaagaa CD 501 aaaaaaaata tctattttta ttctactagt agctatgggg ttatgcaaaa CD 551 gagatattct acaaaactcc cgttacccaa ggattttttc aaatatgttc CD 601 aaaaggcaaa aagaaagtat tgaatctcca gaggatgcca tagCagagct CD 651 gtacaaacac ctatactctg ctacagacgc agatgtattc ttttcggaat CD 701 ccatatttag ggaattaTag aagaggtttt tccaacatag atgcgaatta CD 751 ggacgaattg gtagacgaaa cctaaacatc aagctaactc ttgatgtacc CD 801 cgaaacggag tcttttttgc taccccaaga catattagca gctgcagatc CD 851 actCagtaga aataagttac ggagagggca aactcgacga tatagatcat CD 901 ttgaaaaatc gacgtgttcg atccgttgca gatttgcttc aggaacaatt CD 951 gaaattagct cCaaaccgtt tggagaattt gattcgaTaa aatttatcta CD 1001 gagccgttag gcgcaaacgc gcaatcactc cccgggggtt ggtgacaccc CD 1051 gtgccagtaa tagcagcttt caaggagttt tttggttcac accccctttc CD 1101 gcaatttttg gaccaaacaa atccattatc tgaaatggtt cataaacgaa CD 1151 gattaagctc tgtaggtccc ggcgggttaa cacgtcgaac cgctagtttt CD 1201 caagctagag atattcattt cagtcattat ggtcgcatct gcccaatcga CD 1251 aacatcggaa ggtatgaatg ctggcctgat ttcctcatta gctattcagg CD 1301 caggagttaa cacttcggga tctttgggga gcccttacct cgaaatgtca CD 1351 gattcgtctg gggaggagca gttagtcaat ttatcacccg cagaagatga CD 1401 ttattaccga gtagcaagtg agaatttact attatccgaa tggagaggtt CD 1451 cggagaagga aattatacca gtgcgatatc aacaagagtt tctcagcgtt CD 1501 ctctgggaac aagttgattt tcgaagtatt catcctctcc atcatttttc CD 1551 catcggagct tctctcattc cattcattga acataatgat gcaaaccgtg CD 1601 ctttgatggg ttctaccaCg caacgtcaag ctgttccatt aattaagccc CD 1651 gaaagatgca ttgtaggaac tgggttggaa agtcaagtag ctttggattc CD 1701 gggaagtgta gctatatccg aacaggatgg taaagtttgc tatattgatg CD 1751 gtaatagaat tgagctatct cttatccacg aagcgaaaaa gaacaaattg CD 1801 gctcaaccta ctacaattga ggaattaaaa atatttgagc gttccaataa CD 1851 taacacctgc atgcaccaaa aacccgcggt ttcgctggga gaactcctga CD 1901 gaggcggaga aatcgtagcg gatggagcag cgactgtcag gggggaacta CD 1951 gctctgggta aaaatatatt agtagcctac atgccgtggg aaggatacaa CD 2001 cttcgaagat gcggtcttga ttagtgaacg ccttatctat gaagatattt CD 2051 tcacatctct tcacatcgaa aaacatgagg ttgaaatttg tgcaacaaat CD 2101 caaggacctg agcgggttac caagcaaata tctcaattgg atggttattt CD 2151 acttcgacac ctcgacgacg atgggctcgt agaatCagga tcttgggtgg CD 2201 aggccggaga cgttttggta ggtaaactga cgcctcagga gggggcaagc CD 2251 tcatcacgtg ttccagaagg aagatCatta caagctattt ttggtataca CD 2301 actggttaat gcaagagaaa gttgtctaag agtacctatt ggtgggagag CD 2351 gtcgagtcaC tgatgtgagg tgggtatacc ccgaagatga tgctacaaat CD 2401 gatttggaag taattcatat atatatattg caaagacgta agatacaagt CD 2451 gggtgacaag atagccggta ggcatggaaa taaaggtatt gtatcaaaga CD 2501 tagtacccag gcaagatatg ccctatttgc aaaatggtac gccggttgat CD 2551 atgatactaa gtcccttggg agtaccttca cgaatgaatg tgggacagat CD 2601 tttcgaatgc ttgcttgggt tagccgggga gttttCagaa actcattacc CD 2651 gtgtagtacc ctttgatgaa agatatgaac gggaagcttc cagaaaacta CD 2701 gtatttgccg aacCtcacga agcgggtgcg cggaccaata atccgtggct CD 2751 attcgaaccc agccaccctg gaaagagtcg attgatcgat ggacgaacgg CD 2801 gtgatccctt tggacaatct attacaactg ggaaagctta tataatgaaa CD 2851 cttattcatc aggttgatga taagattcac gcacgatcta gtggtcccta CD 2901 cgcgctcgtt acacagcaac ctctcaaggg gaaatcgaga cgggggggac CD 2951 aacgaattgg agaaatggaa gtctgggctt Cggaggggtt tggggtgtcc CD 3001 tacaccttgc aggaaatgct tacaactaaa tcagatcata ttcaggctcg CD 3051 ctacaaagca cttagtgcaa ttatgaccgg aaaaccagtt tgcaaaccta CD 3101 aaaccgttcc agagtctttc cgattgctag ttcgggagtt acgaCgtatg CD 3151 ggcctaaatt tggaacgcaa tttcataCct gaagaagatt tgggaaggga CD 3201 atttgaaaac atttga FT EDITED CDNA CD 1 atgcccgtac tgccagaact tgcacaaatt caatttaaag gttttagtcg CD 51 tttcgttcat caaaaattgc ttaaggaact tgaaaatttc ccaaaaattg CD 101 aagatacaga taaggaagta gaattcCgat Ttattggaaa tcagtaccaa CD 151 ttgacagaac cttctctcga agagagagat gccgcgtatc aatgtattac CD 201 gtattccgct gaccTatatg taccagctCa attgatttgt aaggaagacc CD 251 aaatagtgca agaggaagat gtacgactcg gatctattcc ttggatgaat CD 301 tccggaggaa catttattat taatgggatc gctagagttt tagtcagtca CD 351 aatattgagg agtcctggta tttactacaa tcgggagtcg gatcagagag CD 401 ggattctcgc gtataccagc accgTaattt cagatcaggg agggagattt CD 451 aagctagaga tagacgggag gaatagaata tgggttcgta taagcaagaa CD 501 aaaaaaaata tctattttta ttctactagt agctatgggg ttatgcaaaa CD 551 gagatattct acaaaactcc cgttacccaa ggattttttc aaatatgttc CD 601 aaaaggcaaa aagaaagtat tgaatctcca gaggatgcca tagTagagct CD 651 gtacaaacac ctatactctg ctacagacgc agatgtattc ttttcggaat CD 701 ccatatttag ggaattaCag aagaggtttt tccaacatag atgcgaatta CD 751 ggacgaattg gtagacgaaa cctaaacatc aagctaactc ttgatgtacc CD 801 cgaaacggag tcttttttgc taccccaaga catattagca gctgcagatc CD 851 actTagtaga aataagttac ggagagggca aactcgacga tatagatcat CD 901 ttgaaaaatc gacgtgttcg atccgttgca gatttgcttc aggaacaatt CD 951 gaaattagct cTaaaccgtt tggagaattt gattcgaCaa aatttatcta CD 1001 gagccgttag gcgcaaacgc gcaatcactc cccgggggtt ggtgacaccc CD 1051 gtgccagtaa tagcagcttt caaggagttt tttggttcac accccctttc CD 1101 gcaatttttg gaccaaacaa atccattatc tgaaatggtt cataaacgaa CD 1151 gattaagctc tgtaggtccc ggcgggttaa cacgtcgaac cgctagtttt CD 1201 caagctagag atattcattt cagtcattat ggtcgcatct gcccaatcga CD 1251 aacatcggaa ggtatgaatg ctggcctgat ttcctcatta gctattcagg CD 1301 caggagttaa cacttcggga tctttgggga gcccttacct cgaaatgtca CD 1351 gattcgtctg gggaggagca gttagtcaat ttatcacccg cagaagatga CD 1401 ttattaccga gtagcaagtg agaatttact attatccgaa tggagaggtt CD 1451 cggagaagga aattatacca gtgcgatatc aacaagagtt tctcagcgtt CD 1501 ctctgggaac aagttgattt tcgaagtatt catcctctcc atcatttttc CD 1551 catcggagct tctctcattc cattcattga acataatgat gcaaaccgtg CD 1601 ctttgatggg ttctaccaTg caacgtcaag ctgttccatt aattaagccc CD 1651 gaaagatgca ttgtaggaac tgggttggaa agtcaagtag ctttggattc CD 1701 gggaagtgta gctatatccg aacaggatgg taaagtttgc tatattgatg CD 1751 gtaatagaat tgagctatct cttatccacg aagcgaaaaa gaacaaattg CD 1801 gctcaaccta ctacaattga ggaattaaaa atatttgagc gttccaataa CD 1851 taacacctgc atgcaccaaa aacccgcggt ttcgctggga gaactcctga CD 1901 gaggcggaga aatcgtagcg gatggagcag cgactgtcag gggggaacta CD 1951 gctctgggta aaaatatatt agtagcctac atgccgtggg aaggatacaa CD 2001 cttcgaagat gcggtcttga ttagtgaacg ccttatctat gaagatattt CD 2051 tcacatctct tcacatcgaa aaacatgagg ttgaaatttg tgcaacaaat CD 2101 caaggacctg agcgggttac caagcaaata tctcaattgg atggttattt CD 2151 acttcgacac ctcgacgacg atgggctcgt agaatTagga tcttgggtgg CD 2201 aggccggaga cgttttggta ggtaaactga cgcctcagga gggggcaagc CD 2251 tcatcacgtg ttccagaagg aagatTatta caagctattt ttggtataca CD 2301 actggttaat gcaagagaaa gttgtctaag agtacctatt ggtgggagag CD 2351 gtcgagtcaT tgatgtgagg tgggtatacc ccgaagatga tgctacaaat CD 2401 gatttggaag taattcatat atatatattg caaagacgta agatacaagt CD 2451 gggtgacaag atagccggta ggcatggaaa taaaggtatt gtatcaaaga CD 2501 tagtacccag gcaagatatg ccctatttgc aaaatggtac gccggttgat CD 2551 atgatactaa gtcccttggg agtaccttca cgaatgaatg tgggacagat CD 2601 tttcgaatgc ttgcttgggt tagccgggga gttttTagaa actcattacc CD 2651 gtgtagtacc ctttgatgaa agatatgaac gggaagcttc cagaaaacta CD 2701 gtatttgccg aacTtcacga agcgggtgcg cggaccaata atccgtggct CD 2751 attcgaaccc agccaccctg gaaagagtcg attgatcgat ggacgaacgg CD 2801 gtgatccctt tggacaatct attacaactg ggaaagctta tataatgaaa CD 2851 cttattcatc aggttgatga taagattcac gcacgatcta gtggtcccta CD 2901 cgcgctcgtt acacagcaac ctctcaaggg gaaatcgaga cgggggggac CD 2951 aacgaattgg agaaatggaa gtctgggctt Tggaggggtt tggggtgtcc CD 3001 tacaccttgc aggaaatgct tacaactaaa tcagatcata ttcaggctcg CD 3051 ctacaaagca cttagtgcaa ttatgaccgg aaaaccagtt tgcaaaccta CD 3101 aaaccgttcc agagtctttc cgattgctag ttcgggagtt acgaTgtatg CD 3151 ggcctaaatt tggaacgcaa tttcataTct gaagaagatt tgggaaggga CD 3201 atttgaaaac atttga SQ SEQUENCE 1072 AA; MPVLPELAQI QFKGFSRFVH QKLLKELENF PKIEDTDKEV EFRFIGNQYQ LTEPSLEERD AAYQCITYSA DLYVPAQLIC KEDQIVQEED VRLGSIPWMN SGGTFIINGI ARVLVSQILR SPGIYYNRES DQRGILAYTS TVISDQGGRF KLEIDGRNRI WVRISKKKKI SIFILLVAMG LCKRDILQNS RYPRIFSNMF KRQKESIESP EDAIVELYKH LYSATDADVF FSESIFRELQ KRFFQHRCEL GRIGRRNLNI KLTLDVPETE SFLLPQDILA AADHLVEISY GEGKLDDIDH LKNRRVRSVA DLLQEQLKLA LNRLENLIRQ NLSRAVRRKR AITPRGLVTP VPVIAAFKEF FGSHPLSQFL DQTNPLSEMV HKRRLSSVGP GGLTRRTASF QARDIHFSHY GRICPIETSE GMNAGLISSL AIQAGVNTSG SLGSPYLEMS DSSGEEQLVN LSPAEDDYYR VASENLLLSE WRGSEKEIIP VRYQQEFLSV LWEQVDFRSI HPLHHFSIGA SLIPFIEHND ANRALMGSTM QRQAVPLIKP ERCIVGTGLE SQVALDSGSV AISEQDGKVC YIDGNRIELS LIHEAKKNKL AQPTTIEELK IFERSNNNTC MHQKPAVSLG ELLRGGEIVA DGAATVRGEL ALGKNILVAY MPWEGYNFED AVLISERLIY EDIFTSLHIE KHEVEICATN QGPERVTKQI SQLDGYLLRH LDDDGLVELG SWVEAGDVLV GKLTPQEGAS SSRVPEGRLL QAIFGIQLVN ARESCLRVPI GGRGRVIDVR WVYPEDDATN DLEVIHIYIL QRRKIQVGDK IAGRHGNKGI VSKIVPRQDM PYLQNGTPVD MILSPLGVPS RMNVGQIFEC LLGLAGEFLE THYRVVPFDE RYEREASRKL VFAELHEAGA RTNNPWLFEP SHPGKSRLID GRTGDPFGQS ITTGKAYIMK LIHQVDDKIH ARSSGPYALV TQQPLKGKSR RGGQRIGEME VWALEGFGVS YTLQEMLTTK SDHIQARYKA LSAIMTGKPV CKPKTVPESF RLLVRELRCM GLNLERNFIS EEDLGREFEN I* // ID AY178864_17 STANDARD; PRT; 36 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbM FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29385.2 FT PROTEIN_NAME : photosystem II M protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 28136 - 28243 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 108 NT; CD 1 aCggaagtaa acattcttgc gtttgtagcc actgcacttt tcattctaat CD 51 tccgacagct tttctactca ttctttacat tcagacggcc gcccaaaata CD 101 atgggtag FT EDITED CDNA CD 1 aTggaagtaa acattcttgc gtttgtagcc actgcacttt tcattctaat CD 51 tccgacagct tttctactca ttctttacat tcagacggcc gcccaaaata CD 101 atgggtag SQ SEQUENCE 36 AA; MEVNILAFVA TALFILIPTA FLLILYIQTA AQNNG* // ID AY178864_18 STANDARD; PRT; 30 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : petN FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29386.2 FT PROTEIN_NAME : cytochrome b6/f complex subunit VIII FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 29157 - 29246 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 12 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 90 NT; CD 1 aCggattcag tcactatagc ttgggctgcc ttgaCggcaa tttctacgtt CD 51 ttccctctcg cttgtagttc ggggaagaag tgggttgtga FT EDITED CDNA CD 1 aTggattcag tcactatagc ttgggctgcc ttgaTggcaa tttctacgtt CD 51 ttccctctcg cttgtagttc ggggaagaag tgggttgtga SQ SEQUENCE 30 AA; MDSVTIAWAA LMAISTFSLS LVVRGRSGL* // ID AY178864_19 STANDARD; PRT; 63 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbZ FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29387.1 FT PROTEIN_NAME : Z protein of photosystem II FT EVIDENCE : FT EXCEPTION : FT REGIONS : 30407 - 30595 FT DIRECTIONS : negative FT EDITING : 57 P(ccC) -> P(ccT) FT CODON_START : 1 CL CDNALEN 189 NT; CD 1 atgactactg cttttcaatt tgctttattt gcattaattg ctacctcatt CD 51 tttactagtt gttggtgtgc ctgtggcgtt tgcgtctccc ggaggatggt CD 101 ctgacaacaa aaatattgtt ttttcagggg cctcattatg gattggatta CD 151 gtttttttgg taggtatacc Caattccttc atctcctaa FT EDITED CDNA CD 1 atgactactg cttttcaatt tgctttattt gcattaattg ctacctcatt CD 51 tttactagtt gttggtgtgc ctgtggcgtt tgcgtctccc ggaggatggt CD 101 ctgacaacaa aaatattgtt ttttcagggg cctcattatg gattggatta CD 151 gtttttttgg taggtatacc Taattccttc atctcctaa SQ SEQUENCE 63 AA; MTTAFQFALF ALIATSFLLV VGVPVAFASP GGWSDNKNIV FSGASLWIGL VFLVGIPNSF IS* // ID AY178864_22 STANDARD; PRT; 101 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps14 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29390.2 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 35484 - 35786 FT DIRECTIONS : negative FT EDITING : 83 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atggcaaaaa aaagtcttat tgaaaaggag aatagtaaga aaaaattggt CD 51 gaaaaaatat aatcttcttc gccaattttt gagacgagag attaagaata CD 101 gtttgcggat ccaggataaa ctaattattt ccgaaaaatt gcaatctcta CD 151 ccacgcaaca gtgcacgcgt tcgtctccgt aaccggtgct ccctaaccgg CD 201 acgacccaga tccaattatc gagattttgg tttttccaga cacgtacCcc CD 251 gcgagatggc acacacctgt gtcttgcctg gagtgttgaa atcgagttgg CD 301 tag FT EDITED CDNA CD 1 atggcaaaaa aaagtcttat tgaaaaggag aatagtaaga aaaaattggt CD 51 gaaaaaatat aatcttcttc gccaattttt gagacgagag attaagaata CD 101 gtttgcggat ccaggataaa ctaattattt ccgaaaaatt gcaatctcta CD 151 ccacgcaaca gtgcacgcgt tcgtctccgt aaccggtgct ccctaaccgg CD 201 acgacccaga tccaattatc gagattttgg tttttccaga cacgtacTcc CD 251 gcgagatggc acacacctgt gtcttgcctg gagtgttgaa atcgagttgg CD 301 tag SQ SEQUENCE 101 AA; MAKKSLIEKE NSKKKLVKKY NLLRQFLRRE IKNSLRIQDK LIISEKLQSL PRNSARVRLR NRCSLTGRPR SNYRDFGFSR HVLREMAHTC VLPGVLKSSW * // ID AY178864_23 STANDARD; PRT; 735 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psaB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29391.2 FT PROTEIN_NAME : photosystem I P700 apoprotein A2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 35920 - 38124 FT DIRECTIONS : negative FT EDITING : 255 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 2205 NT; CD 1 atggtatcaa gatttccaaa gttcagccag ggtctatccc aggacccaac CD 51 tactcgtcgt atctggtttg gcatagccac tgcgcatgat tttgaaagtc CD 101 atgacgatac taccgaagaa cgtctctatc aaaaaatatt tgcatctcac CD 151 tttggtcagt tagctattat ttttctatgg acctctggga atttgttcca CD 201 cgtagcttgg cagggcaact ttgaaacatg ggtacaggac ccattacatg CD 251 tcaggccgat tgcccatgcc atttgggatc ctcattttgg tcaaccggcg CD 301 gtcgaagcct atacccgggg ggggtccgcg ggcccggtca atattgccta CD 351 ttccggcgta tatcagtggt ggtacactat tggtttacgc aataacgaag CD 401 atctctacac cggagccatt tttctgctag ctgttgctgc tttgttccta CD 451 ctagctagct ggttacacct ccaacccaaa tggaaaccaa gcatctcctg CD 501 gttcaaaaat gctgaatctc gtcttaatca tcacctatca ggattatttg CD 551 gagtgagttc cctagcttgg acaggccact tgattcatgt agctattccc CD 601 gaagcaaggg gcgggcatgt cagatggaac gatttattga ctactgcccc CD 651 gcatccccag gggttgggac cttttttttc gggtcaatgg agcgtttact CD 701 cgcaaaatcc tgactctaac acccatttgt tcaatagcaa ccaaggagca CD 751 ggaacagcta ttcCaacttt tctgggggga ttccatccac aaactcaaag CD 801 tttgtggcta actgatatgg ctcatcacca cctagcaata gccgtcgtgt CD 851 ttataattgc cggccatatg tacagaacta actttggtat tggacacagc CD 901 atgaaagaaa ttttggatgc tcacattccc ccgggaggta agctgggacg CD 951 tggacaccgg ggactttatg atacggtgaa taattctctc cacttccaat CD 1001 taggacttgc tttagctgct ttgggagtca tcacctccct tgttgcacaa CD 1051 catatgtatt ccttacccgc ctatgctttt ctagcgcagg attatacgac CD 1101 ccaagcagca ctatatactc accaccaata cattgccggg tttatcatgg CD 1151 caggagcttt tgcacatgga gccatcttct ttcttagaga ttatgatccc CD 1201 gagcagaata gagataatgt gttggcaaga atgttagagc acaaagaagc CD 1251 aattatatct cacctaagtt gggctagttt atttctgggt tttcatacgt CD 1301 taggtcttta tgttcataac gatgtaatgc tagccttcgg gactccggaa CD 1351 aaacagattc ttattgaacc cgtatttgct cagtggattc aatctgctca CD 1401 tggtaaagtt tcatacggtt ttgacgtgct tctatcttca gtagatagtc CD 1451 cggcaagtaa tgctggtcgg ggcttgtggt tacctggctg gttagacgct CD 1501 gttaacagta gcaataattc gttattttta acgattggtc ccggggattt CD 1551 tctcgttcac cacgccattg ctttaggttt acacaccact acactaattt CD 1601 tggtgaaagg tgctttagat gcacgcgggt ccaagttgat gccggataag CD 1651 aaagaatttg gttatagttt tccttgcgat ggccccggcc gagggggaac CD 1701 ttgcgacatt tctgcctggg atgctttcta cttagctgtc ttttggatgc CD 1751 tgaacacaat tggatgggtt accttctatt ggcactggaa acacatcact CD 1801 ttatggcagg gcaatgctgc tcaattcaac gaatcttcta cgtatctaat CD 1851 gggatggcta agagattatt tatggctaaa ttcctcgcag cttattaatg CD 1901 gctataaccc ctttggtatg aacagcttat ctgtgtgggc atggatgttt CD 1951 ttgtttgggc atctcgtgtg ggctaccggg tttatgtttt tgatttcgtg CD 2001 gcgcggttac tggcaagaac tcatcgaaac tttagcttgg gctcatgaaa CD 2051 gaacgcctct tgcaaatatg atacggtgga aagataaacc ggttgccctt CD 2101 tctatcgttc aagcgcgact ggttggatta gcgcacttct ccgtgggtta CD 2151 tatatttacc tacgcagctt tcttgatagc atctacatca ggtaaatttg CD 2201 gctag FT EDITED CDNA CD 1 atggtatcaa gatttccaaa gttcagccag ggtctatccc aggacccaac CD 51 tactcgtcgt atctggtttg gcatagccac tgcgcatgat tttgaaagtc CD 101 atgacgatac taccgaagaa cgtctctatc aaaaaatatt tgcatctcac CD 151 tttggtcagt tagctattat ttttctatgg acctctggga atttgttcca CD 201 cgtagcttgg cagggcaact ttgaaacatg ggtacaggac ccattacatg CD 251 tcaggccgat tgcccatgcc atttgggatc ctcattttgg tcaaccggcg CD 301 gtcgaagcct atacccgggg ggggtccgcg ggcccggtca atattgccta CD 351 ttccggcgta tatcagtggt ggtacactat tggtttacgc aataacgaag CD 401 atctctacac cggagccatt tttctgctag ctgttgctgc tttgttccta CD 451 ctagctagct ggttacacct ccaacccaaa tggaaaccaa gcatctcctg CD 501 gttcaaaaat gctgaatctc gtcttaatca tcacctatca ggattatttg CD 551 gagtgagttc cctagcttgg acaggccact tgattcatgt agctattccc CD 601 gaagcaaggg gcgggcatgt cagatggaac gatttattga ctactgcccc CD 651 gcatccccag gggttgggac cttttttttc gggtcaatgg agcgtttact CD 701 cgcaaaatcc tgactctaac acccatttgt tcaatagcaa ccaaggagca CD 751 ggaacagcta ttcTaacttt tctgggggga ttccatccac aaactcaaag CD 801 tttgtggcta actgatatgg ctcatcacca cctagcaata gccgtcgtgt CD 851 ttataattgc cggccatatg tacagaacta actttggtat tggacacagc CD 901 atgaaagaaa ttttggatgc tcacattccc ccgggaggta agctgggacg CD 951 tggacaccgg ggactttatg atacggtgaa taattctctc cacttccaat CD 1001 taggacttgc tttagctgct ttgggagtca tcacctccct tgttgcacaa CD 1051 catatgtatt ccttacccgc ctatgctttt ctagcgcagg attatacgac CD 1101 ccaagcagca ctatatactc accaccaata cattgccggg tttatcatgg CD 1151 caggagcttt tgcacatgga gccatcttct ttcttagaga ttatgatccc CD 1201 gagcagaata gagataatgt gttggcaaga atgttagagc acaaagaagc CD 1251 aattatatct cacctaagtt gggctagttt atttctgggt tttcatacgt CD 1301 taggtcttta tgttcataac gatgtaatgc tagccttcgg gactccggaa CD 1351 aaacagattc ttattgaacc cgtatttgct cagtggattc aatctgctca CD 1401 tggtaaagtt tcatacggtt ttgacgtgct tctatcttca gtagatagtc CD 1451 cggcaagtaa tgctggtcgg ggcttgtggt tacctggctg gttagacgct CD 1501 gttaacagta gcaataattc gttattttta acgattggtc ccggggattt CD 1551 tctcgttcac cacgccattg ctttaggttt acacaccact acactaattt CD 1601 tggtgaaagg tgctttagat gcacgcgggt ccaagttgat gccggataag CD 1651 aaagaatttg gttatagttt tccttgcgat ggccccggcc gagggggaac CD 1701 ttgcgacatt tctgcctggg atgctttcta cttagctgtc ttttggatgc CD 1751 tgaacacaat tggatgggtt accttctatt ggcactggaa acacatcact CD 1801 ttatggcagg gcaatgctgc tcaattcaac gaatcttcta cgtatctaat CD 1851 gggatggcta agagattatt tatggctaaa ttcctcgcag cttattaatg CD 1901 gctataaccc ctttggtatg aacagcttat ctgtgtgggc atggatgttt CD 1951 ttgtttgggc atctcgtgtg ggctaccggg tttatgtttt tgatttcgtg CD 2001 gcgcggttac tggcaagaac tcatcgaaac tttagcttgg gctcatgaaa CD 2051 gaacgcctct tgcaaatatg atacggtgga aagataaacc ggttgccctt CD 2101 tctatcgttc aagcgcgact ggttggatta gcgcacttct ccgtgggtta CD 2151 tatatttacc tacgcagctt tcttgatagc atctacatca ggtaaatttg CD 2201 gctag SQ SEQUENCE 735 AA; MVSRFPKFSQ GLSQDPTTRR IWFGIATAHD FESHDDTTEE RLYQKIFASH FGQLAIIFLW TSGNLFHVAW QGNFETWVQD PLHVRPIAHA IWDPHFGQPA VEAYTRGGSA GPVNIAYSGV YQWWYTIGLR NNEDLYTGAI FLLAVAALFL LASWLHLQPK WKPSISWFKN AESRLNHHLS GLFGVSSLAW TGHLIHVAIP EARGGHVRWN DLLTTAPHPQ GLGPFFSGQW SVYSQNPDSN THLFNSNQGA GTAILTFLGG FHPQTQSLWL TDMAHHHLAI AVVFIIAGHM YRTNFGIGHS MKEILDAHIP PGGKLGRGHR GLYDTVNNSL HFQLGLALAA LGVITSLVAQ HMYSLPAYAF LAQDYTTQAA LYTHHQYIAG FIMAGAFAHG AIFFLRDYDP EQNRDNVLAR MLEHKEAIIS HLSWASLFLG FHTLGLYVHN DVMLAFGTPE KQILIEPVFA QWIQSAHGKV SYGFDVLLSS VDSPASNAGR GLWLPGWLDA VNSSNNSLFL TIGPGDFLVH HAIALGLHTT TLILVKGALD ARGSKLMPDK KEFGYSFPCD GPGRGGTCDI SAWDAFYLAV FWMLNTIGWV TFYWHWKHIT LWQGNAAQFN ESSTYLMGWL RDYLWLNSSQ LINGYNPFGM NSLSVWAWMF LFGHLVWATG FMFLISWRGY WQELIETLAW AHERTPLANM IRWKDKPVAL SIVQARLVGL AHFSVGYIFT YAAFLIASTS GKFG* // ID AY178864_24 STANDARD; PRT; 751 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psaA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29392.2 FT PROTEIN_NAME : photosystem I P700 apoprotein A1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 38150 - 40402 FT DIRECTIONS : negative FT EDITING : 84 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 2253 NT; CD 1 atgactattc gttcgccaga accagaagtc aaaattatgg tagagaagga CD 51 tcctgtaaaa acttctttcg agaagtgggc tcagcctgga catttcgcaa CD 101 gaaatttagc taagggtccc agtaccacta catggatttg gaacctacac CD 151 gccgatgccc atgattttga tagtcatacc aatgacttgg aggatatatc CD 201 ccgtaagata tttagtgcgc attttggcca actagctatt attttcattC CD 251 ggttgagcgg gatgtatttt catggagccc gtttttccaa ctatgagtca CD 301 tggctgaatg atcccacaca cgtaaaaccc agtgcccaag ttgtttggcc CD 351 aatagtgggt caagaaatac ttaatggaga tgtgggcggg gggtttcagg CD 401 gcgtgcaaat aacgtccgga ttcttccaac tatggcgagc ttccggaata CD 451 actagcgagt tacagctcta ttgcacagcc gtgggtgctt tagtttttgc CD 501 tggattaatg ttttttgctg gttggtttca ctatcacaag gctgctccaa CD 551 aattagcttg gtttcaaaat gtcgaatcca tgttgaatca tcacttggcc CD 601 ggtctattgg gattgggatc gctaggatgg gcgggacatc aaatacacgt CD 651 atcgctccct atcaatcagc tcctagacgc aggtgttgac cccgaagaaa CD 701 taccccttcc tcacgaactc atccttaatc gtgatcttct agctcagacg CD 751 tatccaagtt ttgcaaaagg attaattccg tttttcactt tgaactggtc CD 801 ggaatactcg gattttctaa cttttcgcgg cggattgaac ccgataacag CD 851 ggggtctgtg gttgactgat accgcacatc accatttggc cattgcggtt CD 901 ctctttttgg tagctggtca tatgtacagg acaaattggg gtatcgggca CD 951 tagtacgaag gaaatactag aagctcataa aggacctttc acgggtgagg CD 1001 gacacaaggg tatttacgag attttgacaa gttcatggca cgctcaatta CD 1051 gctattaatc ttgccacttt gggatcctta acaattattg tctctcacca CD 1101 catgtatgct atgccgcctt atccctactt agctaccgac tacgcaacac CD 1151 aactttcttt gtttacacat cacatgtgga tagggggttt cttaatagtg CD 1201 ggagcagctg cacatgcagc tattttcgtg gtaagggatt atgatccaac CD 1251 tactcaatac aacaacctgt tggatcgtgt cattcgtcat cgtgatacaa CD 1301 taatttcaca tcttaactgg gtctgcatct tccttggttt tcatagcttc CD 1351 ggtttgtata ttcacaacga tactatgagt gccttggggc gtcctcaaga CD 1401 tatgttttcg gataccgcta ttcaactgca accaatcttt gcccagtgga CD 1451 tccagaatac tcacgccttg gctcctggat cgactgcacc taacgcaaca CD 1501 gcaggcacca gcttggcctg gggtgggagc gacttagtag cagtggccgg CD 1551 caaggtggcc ttagctccaa ttccattagg caccgcagat tttttggtgc CD 1601 accacatcca cgcattcaca attcatgtta ctgtactaat attattgaaa CD 1651 ggcgtcttat ttgcacgcag ctctcgacta atacccgaca aagcaaatct CD 1701 tggttttcgc tttccttgcg acggccccgg aagggggggc acctgccagg CD 1751 tatctgcttg ggatcacgta ttcttggggc tattttggat gtacaactct CD 1801 atttcagtgg ttatatttca tttcagctgg aagatgcaat cggatgtatg CD 1851 gggaagtgta agtgaacagg gagcagtgag ccacatcact ggaggaaact CD 1901 ttgcacaaag ttcaacgaca atcaatggat ggctgcgaga ttttttgtgg CD 1951 gcacaggctt ctcaagtcat tcagtcatat ggttcttcat tatctgcata CD 2001 tgggcttcta ttcttagggg ctcattttgt ctgggccttt agcttaatgt CD 2051 ttctattcag tggtcgcggc tattggcaag aacttattga atctatagtt CD 2101 tgggctcata acaaattgaa agttgctcct gttacccaac ccagagctct CD 2151 gagtattata cagggacgtg cagtgggagt aactcattac cttctgggtg CD 2201 gaatcgccac aacttgggca ttcttcctgg cgagaatcgt tgcagtggga CD 2251 taa FT EDITED CDNA CD 1 atgactattc gttcgccaga accagaagtc aaaattatgg tagagaagga CD 51 tcctgtaaaa acttctttcg agaagtgggc tcagcctgga catttcgcaa CD 101 gaaatttagc taagggtccc agtaccacta catggatttg gaacctacac CD 151 gccgatgccc atgattttga tagtcatacc aatgacttgg aggatatatc CD 201 ccgtaagata tttagtgcgc attttggcca actagctatt attttcattT CD 251 ggttgagcgg gatgtatttt catggagccc gtttttccaa ctatgagtca CD 301 tggctgaatg atcccacaca cgtaaaaccc agtgcccaag ttgtttggcc CD 351 aatagtgggt caagaaatac ttaatggaga tgtgggcggg gggtttcagg CD 401 gcgtgcaaat aacgtccgga ttcttccaac tatggcgagc ttccggaata CD 451 actagcgagt tacagctcta ttgcacagcc gtgggtgctt tagtttttgc CD 501 tggattaatg ttttttgctg gttggtttca ctatcacaag gctgctccaa CD 551 aattagcttg gtttcaaaat gtcgaatcca tgttgaatca tcacttggcc CD 601 ggtctattgg gattgggatc gctaggatgg gcgggacatc aaatacacgt CD 651 atcgctccct atcaatcagc tcctagacgc aggtgttgac cccgaagaaa CD 701 taccccttcc tcacgaactc atccttaatc gtgatcttct agctcagacg CD 751 tatccaagtt ttgcaaaagg attaattccg tttttcactt tgaactggtc CD 801 ggaatactcg gattttctaa cttttcgcgg cggattgaac ccgataacag CD 851 ggggtctgtg gttgactgat accgcacatc accatttggc cattgcggtt CD 901 ctctttttgg tagctggtca tatgtacagg acaaattggg gtatcgggca CD 951 tagtacgaag gaaatactag aagctcataa aggacctttc acgggtgagg CD 1001 gacacaaggg tatttacgag attttgacaa gttcatggca cgctcaatta CD 1051 gctattaatc ttgccacttt gggatcctta acaattattg tctctcacca CD 1101 catgtatgct atgccgcctt atccctactt agctaccgac tacgcaacac CD 1151 aactttcttt gtttacacat cacatgtgga tagggggttt cttaatagtg CD 1201 ggagcagctg cacatgcagc tattttcgtg gtaagggatt atgatccaac CD 1251 tactcaatac aacaacctgt tggatcgtgt cattcgtcat cgtgatacaa CD 1301 taatttcaca tcttaactgg gtctgcatct tccttggttt tcatagcttc CD 1351 ggtttgtata ttcacaacga tactatgagt gccttggggc gtcctcaaga CD 1401 tatgttttcg gataccgcta ttcaactgca accaatcttt gcccagtgga CD 1451 tccagaatac tcacgccttg gctcctggat cgactgcacc taacgcaaca CD 1501 gcaggcacca gcttggcctg gggtgggagc gacttagtag cagtggccgg CD 1551 caaggtggcc ttagctccaa ttccattagg caccgcagat tttttggtgc CD 1601 accacatcca cgcattcaca attcatgtta ctgtactaat attattgaaa CD 1651 ggcgtcttat ttgcacgcag ctctcgacta atacccgaca aagcaaatct CD 1701 tggttttcgc tttccttgcg acggccccgg aagggggggc acctgccagg CD 1751 tatctgcttg ggatcacgta ttcttggggc tattttggat gtacaactct CD 1801 atttcagtgg ttatatttca tttcagctgg aagatgcaat cggatgtatg CD 1851 gggaagtgta agtgaacagg gagcagtgag ccacatcact ggaggaaact CD 1901 ttgcacaaag ttcaacgaca atcaatggat ggctgcgaga ttttttgtgg CD 1951 gcacaggctt ctcaagtcat tcagtcatat ggttcttcat tatctgcata CD 2001 tgggcttcta ttcttagggg ctcattttgt ctgggccttt agcttaatgt CD 2051 ttctattcag tggtcgcggc tattggcaag aacttattga atctatagtt CD 2101 tgggctcata acaaattgaa agttgctcct gttacccaac ccagagctct CD 2151 gagtattata cagggacgtg cagtgggagt aactcattac cttctgggtg CD 2201 gaatcgccac aacttgggca ttcttcctgg cgagaatcgt tgcagtggga CD 2251 taa SQ SEQUENCE 751 AA; MTIRSPEPEV KIMVEKDPVK TSFEKWAQPG HFARNLAKGP STTTWIWNLH ADAHDFDSHT NDLEDISRKI FSAHFGQLAI IFIWLSGMYF HGARFSNYES WLNDPTHVKP SAQVVWPIVG QEILNGDVGG GFQGVQITSG FFQLWRASGI TSELQLYCTA VGALVFAGLM FFAGWFHYHK AAPKLAWFQN VESMLNHHLA GLLGLGSLGW AGHQIHVSLP INQLLDAGVD PEEIPLPHEL ILNRDLLAQT YPSFAKGLIP FFTLNWSEYS DFLTFRGGLN PITGGLWLTD TAHHHLAIAV LFLVAGHMYR TNWGIGHSTK EILEAHKGPF TGEGHKGIYE ILTSSWHAQL AINLATLGSL TIIVSHHMYA MPPYPYLATD YATQLSLFTH HMWIGGFLIV GAAAHAAIFV VRDYDPTTQY NNLLDRVIRH RDTIISHLNW VCIFLGFHSF GLYIHNDTMS ALGRPQDMFS DTAIQLQPIF AQWIQNTHAL APGSTAPNAT AGTSLAWGGS DLVAVAGKVA LAPIPLGTAD FLVHHIHAFT IHVTVLILLK GVLFARSSRL IPDKANLGFR FPCDGPGRGG TCQVSAWDHV FLGLFWMYNS ISVVIFHFSW KMQSDVWGSV SEQGAVSHIT GGNFAQSSTT INGWLRDFLW AQASQVIQSY GSSLSAYGLL FLGAHFVWAF SLMFLFSGRG YWQELIESIV WAHNKLKVAP VTQPRALSII QGRAVGVTHY LLGGIATTWA FFLARIVAVG * // ID AY178864_25 STANDARD; PRT; 184 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ycf3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29393.2 FT PROTEIN_NAME : photosystem I assembly protein ycf3 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 42/2 FT INTRON 119/0 FT EDITING : 36 S(tCt) -> F(tTt) FT EDITING : 55 S(tCg) -> L(tTg) FT EDITING : 75 P(cCc) -> L(cTc) FT EDITING : 76 H(Cac) -> Y(Tac) FT EDITING : 80 P(cCt) -> L(cTt) FT EDITING : 99 S(tCg) -> L(tTg) FT EDITING : 118 H(Cac) -> Y(Tac) FT CODON_START : 1 CL CDNALEN 552 NT; CD 1 atgcctaggt cgcagagaaa tgataatttt attgataaaa ctttcacaat CD 51 tctagcggat attctcatac gaattctacc tactactaag agggagaggg CD 101 aagcttCtat atactacagg gatgggatgt cggcccaatc agagggagaa CD 151 tatgcagaag cttCgggaag ttactacaaa gccatgcgtt tggagattga CD 201 ttcttacgac cgaagttaca tacCcCacaa tataggtcCt attcatacca CD 251 gtaatggtaa ccatgcaaaa gctttggaat actactttca agcgtCggag CD 301 cgtaattcct ttttgccaca agcttttaat aatatggctg tgatctgcca CD 351 cCaccgaggg gaacaggcca tttatcaagg agatttagaa atttcggaag CD 401 cttggtttga tcaggctgct gagtattggc gacgggcaat agcactttcc CD 451 cccgacaatt atgccgaagc acagaattgg ctgaaaatta cgggacgctt CD 501 ctccccgtct catcggtggg agagttggaa caacagtacg agagtagcgt CD 551 ga FT EDITED CDNA CD 1 atgcctaggt cgcagagaaa tgataatttt attgataaaa ctttcacaat CD 51 tctagcggat attctcatac gaattctacc tactactaag agggagaggg CD 101 aagcttTtat atactacagg gatgggatgt cggcccaatc agagggagaa CD 151 tatgcagaag cttTgggaag ttactacaaa gccatgcgtt tggagattga CD 201 ttcttacgac cgaagttaca tacTcTacaa tataggtcTt attcatacca CD 251 gtaatggtaa ccatgcaaaa gctttggaat actactttca agcgtTggag CD 301 cgtaattcct ttttgccaca agcttttaat aatatggctg tgatctgcca CD 351 cTaccgaggg gaacaggcca tttatcaagg agatttagaa atttcggaag CD 401 cttggtttga tcaggctgct gagtattggc gacgggcaat agcactttcc CD 451 cccgacaatt atgccgaagc acagaattgg ctgaaaatta cgggacgctt CD 501 ctccccgtct catcggtggg agagttggaa caacagtacg agagtagcgt CD 551 ga SQ SEQUENCE 184 AA; MPRSQRNDNF IDKTFTILAD ILIRILPTTK REREAFIYYR DGMSAQSEGE YAEALGSYYK AMRLEIDSYD RSYILYNIGL IHTSNGNHAK ALEYYFQALE RNSFLPQAFN NMAVICHYRG EQAIYQGDLE ISEAWFDQAA EYWRRAIALS PDNYAEAQNW LKITGRFSPS HRWESWNNST RVA* // ID AY178864_26 STANDARD; PRT; 198 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29394.2 FT PROTEIN_NAME : ribosomal protein S4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 43446 - 44039 FT DIRECTIONS : negative FT EDITING : 78 P(cCg) -> L(cTg) FT EDITING : 143 P(cCg) -> L(cTg) FT EDITING : 180 V(gtC) -> V(gtT) FT CODON_START : 1 CL CDNALEN 594 NT; CD 1 atgcgtcgtc taaaaaattt gccaggactt acgggtacgg gtaagagtaa CD 51 tacgtctaac ttgggggaat ttcgacttgc tgttgaccaa tcaacgtcga CD 101 gaaagatttc tcaattctgc gtgcgtttgg aagccaaaca gagattacgt CD 151 cttaactatg gattgacaga acgccaatta ctaagatatg ttcgcattgc CD 201 tagaagaact aggggttcga caggtcaagt tcCgttgcaa ctgcttgaga CD 251 tgcgtctgga taatattatt tttcagttag gcatggcttc cacaattccc CD 301 gctgcccgac agctggtttg tcacagacat attttggtaa accatcgcgt CD 351 tgtggatata ccaagctatc gatgtaaacc tagggatatt atcagtattc CD 401 ggaaccgacc aacttctgcc aatgctcCga agagtgagtc tctcagtggg CD 451 aacgaagtac cagatcacct aactctgtct atttcgaaaa cgggtgaacc CD 501 aacgggatta gtcaaccatc tggtcaaccg ggaatccgtC aatttggata CD 551 tcaatgaatt gttagttgtt gagtattact ctcgaaaagc ttag FT EDITED CDNA CD 1 atgcgtcgtc taaaaaattt gccaggactt acgggtacgg gtaagagtaa CD 51 tacgtctaac ttgggggaat ttcgacttgc tgttgaccaa tcaacgtcga CD 101 gaaagatttc tcaattctgc gtgcgtttgg aagccaaaca gagattacgt CD 151 cttaactatg gattgacaga acgccaatta ctaagatatg ttcgcattgc CD 201 tagaagaact aggggttcga caggtcaagt tcTgttgcaa ctgcttgaga CD 251 tgcgtctgga taatattatt tttcagttag gcatggcttc cacaattccc CD 301 gctgcccgac agctggtttg tcacagacat attttggtaa accatcgcgt CD 351 tgtggatata ccaagctatc gatgtaaacc tagggatatt atcagtattc CD 401 ggaaccgacc aacttctgcc aatgctcTga agagtgagtc tctcagtggg CD 451 aacgaagtac cagatcacct aactctgtct atttcgaaaa cgggtgaacc CD 501 aacgggatta gtcaaccatc tggtcaaccg ggaatccgtT aatttggata CD 551 tcaatgaatt gttagttgtt gagtattact ctcgaaaagc ttag SQ SEQUENCE 198 AA; MRRLKNLPGL TGTGKSNTSN LGEFRLAVDQ STSRKISQFC VRLEAKQRLR LNYGLTERQL LRYVRIARRT RGSTGQVLLQ LLEMRLDNII FQLGMASTIP AARQLVCHRH ILVNHRVVDI PSYRCKPRDI ISIRNRPTSA NALKSESLSG NEVPDHLTLS ISKTGEPTGL VNHLVNRESV NLDINELLVV EYYSRKA* // ID AY178864_27 STANDARD; PRT; 171 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhJ FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29395.2 FT PROTEIN_NAME : NADH dehydrogenase subunit J FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 46014 - 46526 FT DIRECTIONS : negative FT EDITING : 55 P(cCa) -> L(cTa) FT EDITING : 98 A(gCa) -> V(gTa) FT CODON_START : 1 CL CDNALEN 513 NT; CD 1 atgaacaccg ttgataaaga gaagtttaat ctaaaaacgc gaggtcgatt CD 51 atctgcctgg ttaaccaaac acaatttctc acatcgacct ttgggttacg CD 101 actacagagg tgtcgagatt ttggaagtca agtcggaaga gtggttgtct CD 151 acagctgttg cccCatatgc ttacggattc aactatctac ggtctcaatg CD 201 tgcttacgac gcaacgccgg gggggtctct agttagtgtg tatcacttga CD 251 ctcagatgca agaccagtcg gatcaacccg aggaaatatg tgCaaaagtc CD 301 tttgtttcaa gaacaaatcc tcaaatacct tcggtttatt gggtttggaa CD 351 aagtgccgaa ttccaggaac gtgaatctta tgacatgtta ggaataattt CD 401 atcaaggaca tccgtacctt aggcgtatac taatgcctga aagttggatt CD 451 ggctggccgc tccgtaagga ttacgtggta cccaatttct acgagttaca CD 501 agatgcctac taa FT EDITED CDNA CD 1 atgaacaccg ttgataaaga gaagtttaat ctaaaaacgc gaggtcgatt CD 51 atctgcctgg ttaaccaaac acaatttctc acatcgacct ttgggttacg CD 101 actacagagg tgtcgagatt ttggaagtca agtcggaaga gtggttgtct CD 151 acagctgttg cccTatatgc ttacggattc aactatctac ggtctcaatg CD 201 tgcttacgac gcaacgccgg gggggtctct agttagtgtg tatcacttga CD 251 ctcagatgca agaccagtcg gatcaacccg aggaaatatg tgTaaaagtc CD 301 tttgtttcaa gaacaaatcc tcaaatacct tcggtttatt gggtttggaa CD 351 aagtgccgaa ttccaggaac gtgaatctta tgacatgtta ggaataattt CD 401 atcaaggaca tccgtacctt aggcgtatac taatgcctga aagttggatt CD 451 ggctggccgc tccgtaagga ttacgtggta cccaatttct acgagttaca CD 501 agatgcctac taa SQ SEQUENCE 171 AA; MNTVDKEKFN LKTRGRLSAW LTKHNFSHRP LGYDYRGVEI LEVKSEEWLS TAVALYAYGF NYLRSQCAYD ATPGGSLVSV YHLTQMQDQS DQPEEICVKV FVSRTNPQIP SVYWVWKSAE FQERESYDML GIIYQGHPYL RRILMPESWI GWPLRKDYVV PNFYELQDAY * // ID AY178864_28 STANDARD; PRT; 251 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhK FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29396.2 FT PROTEIN_NAME : NADH dehydrogenase subunit K FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 46584 - 47336 FT DIRECTIONS : negative FT EDITING : 69 F(ttC) -> F(ttT) FT EDITING : 113 P(cCg) -> L(cTg) FT EDITING : 159 H(Cat) -> Y(Tat) FT CODON_START : 1 CL CDNALEN 753 NT; CD 1 atggtgttaa cttccgacca tttagataaa aagaacataa ggaaaattga CD 51 atacaaaggt gaagactctt tctcaaattc gatgtcaaag ctgcctcttc CD 101 aggggggtat gtcagactca atttttatgg ctagtattag tgatttttct CD 151 aactggtcca gactctcgag cttatggccc cttttatatg gtaccagttg CD 201 ttgcttCatt gaatttgctt ccctaatagg ttcgcgattt gattttgacc CD 251 ggtatggtct ggtacctaga tctagtccta gacaggcgga tctaattgtc CD 301 accgctggta ccataacaat gaagatggcc ccatctcCga taagacttta CD 351 tgaacaaatg cccgaaccaa agtatgtaat tgctatggga gcttgcacta CD 401 ttacgggagg gatgtttagt acggattcct acagtaccgt tcgcggggta CD 451 gataaattaa ttcctgtcga tattCatttg ccgggttgcc cgcccaaacc CD 501 cgaagctatc atggatgccg taacgaaact ccgcaagaaa attgctcgaa CD 551 acagatttgt gaaccgggcg tctcgcccca tccgaacgaa gtactttagt CD 601 ataagccacc aacttaatct cgtaccgggc acctgtgccg gaaaatacaa CD 651 ttgggataga gaaaattgtg gtacgaaatt ggcgccagcc aatttttcgg CD 701 aaaattgtca aaagtttgca aatgaacacg atgaattaaa atcagcaatt CD 751 taa FT EDITED CDNA CD 1 atggtgttaa cttccgacca tttagataaa aagaacataa ggaaaattga CD 51 atacaaaggt gaagactctt tctcaaattc gatgtcaaag ctgcctcttc CD 101 aggggggtat gtcagactca atttttatgg ctagtattag tgatttttct CD 151 aactggtcca gactctcgag cttatggccc cttttatatg gtaccagttg CD 201 ttgcttTatt gaatttgctt ccctaatagg ttcgcgattt gattttgacc CD 251 ggtatggtct ggtacctaga tctagtccta gacaggcgga tctaattgtc CD 301 accgctggta ccataacaat gaagatggcc ccatctcTga taagacttta CD 351 tgaacaaatg cccgaaccaa agtatgtaat tgctatggga gcttgcacta CD 401 ttacgggagg gatgtttagt acggattcct acagtaccgt tcgcggggta CD 451 gataaattaa ttcctgtcga tattTatttg ccgggttgcc cgcccaaacc CD 501 cgaagctatc atggatgccg taacgaaact ccgcaagaaa attgctcgaa CD 551 acagatttgt gaaccgggcg tctcgcccca tccgaacgaa gtactttagt CD 601 ataagccacc aacttaatct cgtaccgggc acctgtgccg gaaaatacaa CD 651 ttgggataga gaaaattgtg gtacgaaatt ggcgccagcc aatttttcgg CD 701 aaaattgtca aaagtttgca aatgaacacg atgaattaaa atcagcaatt CD 751 taa SQ SEQUENCE 251 AA; MVLTSDHLDK KNIRKIEYKG EDSFSNSMSK LPLQGGMSDS IFMASISDFS NWSRLSSLWP LLYGTSCCFI EFASLIGSRF DFDRYGLVPR SSPRQADLIV TAGTITMKMA PSLIRLYEQM PEPKYVIAMG ACTITGGMFS TDSYSTVRGV DKLIPVDIYL PGCPPKPEAI MDAVTKLRKK IARNRFVNRA SRPIRTKYFS ISHQLNLVPG TCAGKYNWDR ENCGTKLAPA NFSENCQKFA NEHDELKSAI * // ID AY178864_29 STANDARD; PRT; 121 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29397.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 47327 - 47689 FT DIRECTIONS : negative FT EDITING : 11 R(Cgg) -> W(Tgg) FT EDITING : 62 H(Cat) -> Y(Tat) FT EDITING : 72 S(tCc) -> F(tTc) FT EDITING : 97 A(gCa) -> V(gTa) FT EDITING : 117 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 363 NT; CD 1 atgtttttat ctcaccaata tgactctttc Cggatttttc tattagtctg CD 51 tatatctatt ccacttttgg ctttttctat taccaggttt gccgcccccc CD 101 cccgggaggg gccagaaaag tcaacaagtt acgagtcagg tattgaacca CD 151 aagggagaca cttggattcg atttcagata cgtCattaca tgtttgcctt CD 201 ggtatttacg gtctCcgatg tcgaaaccgt atttctttat ccctgggcta CD 251 catctttcga ggaattgggc ttatttgcat tcgtcgaagC aattgtattc CD 301 atatttatac taatcgtcgg cttggtttat gcttggcgaa aaggagcatC CD 351 ggaatggtgt taa FT EDITED CDNA CD 1 atgtttttat ctcaccaata tgactctttc Tggatttttc tattagtctg CD 51 tatatctatt ccacttttgg ctttttctat taccaggttt gccgcccccc CD 101 cccgggaggg gccagaaaag tcaacaagtt acgagtcagg tattgaacca CD 151 aagggagaca cttggattcg atttcagata cgtTattaca tgtttgcctt CD 201 ggtatttacg gtctTcgatg tcgaaaccgt atttctttat ccctgggcta CD 251 catctttcga ggaattgggc ttatttgcat tcgtcgaagT aattgtattc CD 301 atatttatac taatcgtcgg cttggtttat gcttggcgaa aaggagcatT CD 351 ggaatggtgt taa SQ SEQUENCE 121 AA; MFLSHQYDSF WIFLLVCISI PLLAFSITRF AAPPREGPEK STSYESGIEP KGDTWIRFQI RYYMFALVFT VFDVETVFLY PWATSFEELG LFAFVEVIVF IFILIVGLVY AWRKGALEWC * // ID AY178864_30 STANDARD; PRT; 133 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : atpE FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29398.2 FT PROTEIN_NAME : ATP synthase CF1 epsilon chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 49379 - 49777 FT DIRECTIONS : negative FT EDITING : 3 S(tCa) -> L(tTa) FT EDITING : 20 W(Tgg) -> R(Cgg) FT EDITING : 62 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 399 NT; CD 1 atggtatCaa gtctttgtgt aatggctcct aatcgaatag tttggaattc CD 51 tgaggtaTgg gaaattattt tatccaccaa tagtggtcag attggcatac CD 101 tacctaatca tgcacccctc cttgcagctt tggatatggg ggttttaaaa CD 151 atacgtagtg ataagcaatg gtctgcaatg gcacCgatgg gtggcttcgc CD 201 catgatagat aataatcgag tgataatatt agtcaacgag gcagagagag CD 251 ctagcgaaat tgatcctgag gaagctcgaa aaagttttca aacggctcaa CD 301 gccgagttag ctgaagcaga aggcaggaga aagctaatag aagccaactt CD 351 gacatttaaa agagctaaag ccagattgga agcttcaact atcgtttag FT EDITED CDNA CD 1 atggtatTaa gtctttgtgt aatggctcct aatcgaatag tttggaattc CD 51 tgaggtaCgg gaaattattt tatccaccaa tagtggtcag attggcatac CD 101 tacctaatca tgcacccctc cttgcagctt tggatatggg ggttttaaaa CD 151 atacgtagtg ataagcaatg gtctgcaatg gcacTgatgg gtggcttcgc CD 201 catgatagat aataatcgag tgataatatt agtcaacgag gcagagagag CD 251 ctagcgaaat tgatcctgag gaagctcgaa aaagttttca aacggctcaa CD 301 gccgagttag ctgaagcaga aggcaggaga aagctaatag aagccaactt CD 351 gacatttaaa agagctaaag ccagattgga agcttcaact atcgtttag SQ SEQUENCE 133 AA; MVLSLCVMAP NRIVWNSEVR EIILSTNSGQ IGILPNHAPL LAALDMGVLK IRSDKQWSAM ALMGGFAMID NNRVIILVNE AERASEIDPE EARKSFQTAQ AELAEAEGRR KLIEANLTFK RAKARLEAST IV* // ID AY178864_31 STANDARD; PRT; 494 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : atpB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAB51749.3 FT PROTEIN_NAME : ATP synthase CF1 beta chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 49783 - 51264 FT DIRECTIONS : negative FT EDITING : 6 P(cCc) -> L(cTc) FT EDITING : 77 T(aCg) -> M(aTg) FT EDITING : 181 T(aCg) -> M(aTg) FT EDITING : 183 S(tCa) -> L(tTa) FT EDITING : 214 T(aCg) -> M(aTg) FT EDITING : 249 S(tCa) -> L(tTa) FT EDITING : 461 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 1482 NT; CD 1 atgaaaatca gttctcCcct tttcgaaatt tctgaattgg tggaaaaaaa CD 51 cgtgggctac atcacccaga tcattggacc agtattggat gtagcttttt CD 101 cccctgggga aatgcctagc atctacaact cactagtagt caaaggacga CD 151 aactcggcgg gccaggagat taatgttact tgtgaagttc aacaattgtt CD 201 aggtaacaat gaagtaagag ccgtagccaC gagtgccaca gatggtttaa CD 251 tgagaggtat gggcgctgtt gatacgggag ctcctctaag tgttcccgtt CD 301 ggtgaaacta ctctcggccg aatattcaat gtcctcggtg aacccgtaga CD 351 caatttgggt cccgttcaaa atagtgcaac atttccaatt cacagatccg CD 401 ctccggcatt tacccaattg gataccaagc tatcgatttt tgaaacgggg CD 451 attaaagttg tagatctttt ggccccctat cgtcgaggtg gaaaaattgg CD 501 tttatttggc ggagccggag ttgggaagac agttcttatc aCggaatCaa CD 551 tcaacaatat tgcgaaagct catggaggtg tatctgtatt cggcggggtg CD 601 ggggaacgta cacgtgaggg taatgacctc tacatggaaa Cgaaagagtc CD 651 aaaagttatt aatgaacaaa atatatcgga atcaaaagtg gctttggttt CD 701 atggtcagat gaatgaacca ccgggagctc gtatgagagt tggctCaact CD 751 gctctaacaa tggcggaata tttccgagat atcaataagc gagatgtact CD 801 tctgttcatt gacaacattt ttcgcttcgt tcaggcgggg tcggaggtct CD 851 cagcattact tggtagaatg ccttcggccg tgggttatca gccgaccctt CD 901 gggacagaaa tgggatcttt acaggaaaga attacttcta ctaaggaagg CD 951 gtcaataact tccattcaag ctgtttacgt acctgcagat gatctaactg CD 1001 acccagcccc cgctacaaca tttgcacatc tagatgctac aactgtgctt CD 1051 tcgaggggct tagcggcaaa aggtatctat ccggccgtag atccgttaga CD 1101 ttcgacttca actatgttgc agccttggat tgtaggtgag gagcattatg CD 1151 agacggcaca aggggttaag caaactttgc agcgttacaa ggaacttcaa CD 1201 gatattatag ctattctcgg actagacgag ttatccgaag aggaccgttt CD 1251 gactgtagct agagctcgaa aaatagagcg tttcctatca caaccttttt CD 1301 ttgtagcgga agtattcacg ggttctccgg gtaaatatgt tagtttacca CD 1351 gaaacaatta agggatttca aatgattctt Cctggagagt tggataatct CD 1401 ccccgagcaa gctttttatt tagttggcaa tattgatgaa gccgccgcaa CD 1451 aagccgcggc tttgcaagcg gggggtcaat aa FT EDITED CDNA CD 1 atgaaaatca gttctcTcct tttcgaaatt tctgaattgg tggaaaaaaa CD 51 cgtgggctac atcacccaga tcattggacc agtattggat gtagcttttt CD 101 cccctgggga aatgcctagc atctacaact cactagtagt caaaggacga CD 151 aactcggcgg gccaggagat taatgttact tgtgaagttc aacaattgtt CD 201 aggtaacaat gaagtaagag ccgtagccaT gagtgccaca gatggtttaa CD 251 tgagaggtat gggcgctgtt gatacgggag ctcctctaag tgttcccgtt CD 301 ggtgaaacta ctctcggccg aatattcaat gtcctcggtg aacccgtaga CD 351 caatttgggt cccgttcaaa atagtgcaac atttccaatt cacagatccg CD 401 ctccggcatt tacccaattg gataccaagc tatcgatttt tgaaacgggg CD 451 attaaagttg tagatctttt ggccccctat cgtcgaggtg gaaaaattgg CD 501 tttatttggc ggagccggag ttgggaagac agttcttatc aTggaatTaa CD 551 tcaacaatat tgcgaaagct catggaggtg tatctgtatt cggcggggtg CD 601 ggggaacgta cacgtgaggg taatgacctc tacatggaaa Tgaaagagtc CD 651 aaaagttatt aatgaacaaa atatatcgga atcaaaagtg gctttggttt CD 701 atggtcagat gaatgaacca ccgggagctc gtatgagagt tggctTaact CD 751 gctctaacaa tggcggaata tttccgagat atcaataagc gagatgtact CD 801 tctgttcatt gacaacattt ttcgcttcgt tcaggcgggg tcggaggtct CD 851 cagcattact tggtagaatg ccttcggccg tgggttatca gccgaccctt CD 901 gggacagaaa tgggatcttt acaggaaaga attacttcta ctaaggaagg CD 951 gtcaataact tccattcaag ctgtttacgt acctgcagat gatctaactg CD 1001 acccagcccc cgctacaaca tttgcacatc tagatgctac aactgtgctt CD 1051 tcgaggggct tagcggcaaa aggtatctat ccggccgtag atccgttaga CD 1101 ttcgacttca actatgttgc agccttggat tgtaggtgag gagcattatg CD 1151 agacggcaca aggggttaag caaactttgc agcgttacaa ggaacttcaa CD 1201 gatattatag ctattctcgg actagacgag ttatccgaag aggaccgttt CD 1251 gactgtagct agagctcgaa aaatagagcg tttcctatca caaccttttt CD 1301 ttgtagcgga agtattcacg ggttctccgg gtaaatatgt tagtttacca CD 1351 gaaacaatta agggatttca aatgattctt Tctggagagt tggataatct CD 1401 ccccgagcaa gctttttatt tagttggcaa tattgatgaa gccgccgcaa CD 1451 aagccgcggc tttgcaagcg gggggtcaat aa SQ SEQUENCE 494 AA; MKISSLLFEI SELVEKNVGY ITQIIGPVLD VAFSPGEMPS IYNSLVVKGR NSAGQEINVT CEVQQLLGNN EVRAVAMSAT DGLMRGMGAV DTGAPLSVPV GETTLGRIFN VLGEPVDNLG PVQNSATFPI HRSAPAFTQL DTKLSIFETG IKVVDLLAPY RRGGKIGLFG GAGVGKTVLI MELINNIAKA HGGVSVFGGV GERTREGNDL YMEMKESKVI NEQNISESKV ALVYGQMNEP PGARMRVGLT ALTMAEYFRD INKRDVLLFI DNIFRFVQAG SEVSALLGRM PSAVGYQPTL GTEMGSLQER ITSTKEGSIT SIQAVYVPAD DLTDPAPATT FAHLDATTVL SRGLAAKGIY PAVDPLDSTS TMLQPWIVGE EHYETAQGVK QTLQRYKELQ DIIAILGLDE LSEEDRLTVA RARKIERFLS QPFFVAEVFT GSPGKYVSLP ETIKGFQMIL SGELDNLPEQ AFYLVGNIDE AAAKAAALQA GGQ* // ID AY178864_33 STANDARD; PRT; 311 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : accD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29400.2 FT PROTEIN_NAME : acetyl-CoA carboxylase beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 53836 - 54768 FT DIRECTIONS : positive FT EDITING : 3 T(aCg) -> M(aTg) FT EDITING : 59 H(Cat) -> Y(Tat) FT EDITING : 63 S(tCg) -> L(tTg) FT EDITING : 73 R(Cgc) -> C(Tgc) FT EDITING : 87 L(ctC) -> L(ctT) FT EDITING : 88 S(tCa) -> L(tTa) FT EDITING : 115 H(Cat) -> Y(Tat) FT EDITING : 139 P(cCg) -> L(cTg) FT EDITING : 146 P(cCt) -> L(cTt) FT EDITING : 180 P(cCa) -> L(cTa) FT EDITING : 184 R(Cgt) -> C(Tgt) FT EDITING : 191 T(aCg) -> M(aTg) FT EDITING : 223 P(cCt) -> L(cTt) FT EDITING : 246 S(Tct) -> P(Cct) FT EDITING : 260 *(Taa) -> Q(Caa) FT EDITING : 284 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 933 NT; CD 1 attgttaCgt ctgtaataaa ttggtttgaa gataggcaaa aatttggtgg CD 51 attaattgga gcttttcttg aagaagctac aagaagctct atgacaaatg CD 101 agagagatag acgaataagc gtcaacgcaa acaagggatt atgggctcgg CD 151 tgtgataact gtggaaatat gcttCatgta aaattttCga aacaaaatag CD 201 aagtgtttgt gaagaaCgcg gttatcatct ttcgatgagt agtatggaaa CD 251 ggatcgaact CtCaattgat cctaacacgt ggattccttt ggatgaagac CD 301 atgtccgcaa gagacatttt aagtttctct gacgaggatt ctCatgaaac CD 351 tcgtatactt ctttcccaag aaaagacagg tttaaccgat gctgttcaaa CD 401 caggtatagg atatcCgaat ggaacactta tagcacCtgg cgttatggac CD 451 ttccatttta tgggaggaag tatgggttcc gtagtgggtg aaaaaattac CD 501 tcgtttaatt gaatatgcca ctcaaaggct tctgccacCa gttttgattC CD 551 gtgcctctgg gggagcgcgt aCgcaggaag ggacgttgag cttgatgcaa CD 601 atggctaaaa tttcttctgt tttgcaactc tatcaggttc aaaataaatt CD 651 gctttacata tccgttcCta cttatccaac cacaggtggt gttactgcca CD 701 gtttcgggat gttgggagat ataattattg ccgaaTctaa agcctatatc CD 751 gcatttgcag gtaagagggt aattgaaTaa acgttgcgcc agaagatacc CD 801 tgacggtttt caagcagctg aatctttatt tgataacggg ctactcgatt CD 851 Caatcgttcc acgtaatctt ctgaagggtg ttttgagcga aatatctggg CD 901 ctttacttat cagttcctta taacaagaat tga FT EDITED CDNA CD 1 attgttaTgt ctgtaataaa ttggtttgaa gataggcaaa aatttggtgg CD 51 attaattgga gcttttcttg aagaagctac aagaagctct atgacaaatg CD 101 agagagatag acgaataagc gtcaacgcaa acaagggatt atgggctcgg CD 151 tgtgataact gtggaaatat gcttTatgta aaattttTga aacaaaatag CD 201 aagtgtttgt gaagaaTgcg gttatcatct ttcgatgagt agtatggaaa CD 251 ggatcgaact TtTaattgat cctaacacgt ggattccttt ggatgaagac CD 301 atgtccgcaa gagacatttt aagtttctct gacgaggatt ctTatgaaac CD 351 tcgtatactt ctttcccaag aaaagacagg tttaaccgat gctgttcaaa CD 401 caggtatagg atatcTgaat ggaacactta tagcacTtgg cgttatggac CD 451 ttccatttta tgggaggaag tatgggttcc gtagtgggtg aaaaaattac CD 501 tcgtttaatt gaatatgcca ctcaaaggct tctgccacTa gttttgattT CD 551 gtgcctctgg gggagcgcgt aTgcaggaag ggacgttgag cttgatgcaa CD 601 atggctaaaa tttcttctgt tttgcaactc tatcaggttc aaaataaatt CD 651 gctttacata tccgttcTta cttatccaac cacaggtggt gttactgcca CD 701 gtttcgggat gttgggagat ataattattg ccgaaCctaa agcctatatc CD 751 gcatttgcag gtaagagggt aattgaaCaa acgttgcgcc agaagatacc CD 801 tgacggtttt caagcagctg aatctttatt tgataacggg ctactcgatt CD 851 Taatcgttcc acgtaatctt ctgaagggtg ttttgagcga aatatctggg CD 901 ctttacttat cagttcctta taacaagaat tga SQ SEQUENCE 311 AA; IVMSVINWFE DRQKFGGLIG AFLEEATRSS MTNERDRRIS VNANKGLWAR CDNCGNMLYV KFLKQNRSVC EECGYHLSMS SMERIELLID PNTWIPLDED MSARDILSFS DEDSYETRIL LSQEKTGLTD AVQTGIGYLN GTLIALGVMD FHFMGGSMGS VVGEKITRLI EYATQRLLPL VLICASGGAR MQEGTLSLMQ MAKISSVLQL YQVQNKLLYI SVLTYPTTGG VTASFGMLGD IIIAEPKAYI AFAGKRVIEQ TLRQKIPDGF QAAESLFDNG LLDLIVPRNL LKGVLSEISG LYLSVPYNKN * // ID AY178864_36 STANDARD; PRT; 465 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ycf10 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29403.2 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 56428 - 57822 FT DIRECTIONS : positive FT EDITING : 303 R(Cgg) -> W(Tgg) FT EDITING : 333 T(aCg) -> M(aTg) FT EDITING : 372 R(Cgg) -> W(Tgg) FT EDITING : 376 S(tCa) -> L(tTa) FT EDITING : 427 R(Cgc) -> C(Tgc) FT CODON_START : 1 CL CDNALEN 1395 NT; CD 1 atggcggcgg gtaattcttc atgggcccga gcagctttta cttttaaagc CD 51 tacggttttc aaaaaatcta gatatgtcat atattacagt cttctggaac CD 101 acagatttag tctatctctt tggggaatac ttaaatattc agggatttat CD 151 ttttgtacgg agatccttcg gtcatttccg aaaaagcgct gcaaatccca CD 201 tccctatcgt gtagacggct atccggcagg aagttgttta gatccgcctc CD 251 tgcatgaacc tctagatact tcaactccca agaagatatc tttagtgtct CD 301 tgttctaatt cttacatgcg taacaaaaca gataatggaa aggtaggatc CD 351 taggaatgta tcggaataca aactcgaagg cgattttgcc tctacaagta CD 401 aatccattta ttacaagtta aataatctgg agaaaatgaa tagaaaatta CD 451 gcttggatcg aagccgtttc gagtgagttt tctttttggg aaaaacttcg CD 501 ttccaaacaa atctttccat ttcaaaatga aaaagatttg attgcagaac CD 551 cgtttaacta cgaattagca gtttctcacc gccgtccagt aatttacgag CD 601 tcaattagtt tggtgcctcg gtctgtaact cgtaccttat ccagattcaa CD 651 ggcggagtta acaaatcaat caaatttaaa tttatcagtc cataataaat CD 701 ttgatttagc taagaaccaa gcctctgttt ccctccaata tgttggattc CD 751 cttctctttc ttttcccgat tcaaattgct atagaaaatt ggtttttgga CD 801 accccggatt aggggttggt ggaacatacg tcaaatccaa ttattttcaa CD 851 acgtgtttca ggaagaaaac gctttgaagc agctccgaga agcagaggca CD 901 ttattcCggt tagacgatgt gattggcaac ttggcagata cgcagttgca CD 951 aaattttgat acggatgcgc gcaacgaaac tactcgatta gcaatgaCgt CD 1001 atgacgagct aaatattcag ctactactgc ggctagcaac caacgcaatt CD 1051 agcattgcca ctttatttcc cctactgata ttcgggcgaa agagactcgc CD 1101 ggttttaaat tccCggattc aagagtCatt ttatagttta aatgacacaa CD 1151 tgaaggcgtt ttccatcctt ctattaactg atttatgtgt agggtttcac CD 1201 tcgccccatg gttgggaaat actagtacag tcccttttcg aatattttgg CD 1251 gttgactccc aataaatatg taactcctCg cttcgtctca acctttccag CD 1301 ttattttaga tacgctattt aagtattgga tctttcgtca cttaaatcga CD 1351 acatctcctt caattgtagc aacttatcat acaatgagtg aatga FT EDITED CDNA CD 1 atggcggcgg gtaattcttc atgggcccga gcagctttta cttttaaagc CD 51 tacggttttc aaaaaatcta gatatgtcat atattacagt cttctggaac CD 101 acagatttag tctatctctt tggggaatac ttaaatattc agggatttat CD 151 ttttgtacgg agatccttcg gtcatttccg aaaaagcgct gcaaatccca CD 201 tccctatcgt gtagacggct atccggcagg aagttgttta gatccgcctc CD 251 tgcatgaacc tctagatact tcaactccca agaagatatc tttagtgtct CD 301 tgttctaatt cttacatgcg taacaaaaca gataatggaa aggtaggatc CD 351 taggaatgta tcggaataca aactcgaagg cgattttgcc tctacaagta CD 401 aatccattta ttacaagtta aataatctgg agaaaatgaa tagaaaatta CD 451 gcttggatcg aagccgtttc gagtgagttt tctttttggg aaaaacttcg CD 501 ttccaaacaa atctttccat ttcaaaatga aaaagatttg attgcagaac CD 551 cgtttaacta cgaattagca gtttctcacc gccgtccagt aatttacgag CD 601 tcaattagtt tggtgcctcg gtctgtaact cgtaccttat ccagattcaa CD 651 ggcggagtta acaaatcaat caaatttaaa tttatcagtc cataataaat CD 701 ttgatttagc taagaaccaa gcctctgttt ccctccaata tgttggattc CD 751 cttctctttc ttttcccgat tcaaattgct atagaaaatt ggtttttgga CD 801 accccggatt aggggttggt ggaacatacg tcaaatccaa ttattttcaa CD 851 acgtgtttca ggaagaaaac gctttgaagc agctccgaga agcagaggca CD 901 ttattcTggt tagacgatgt gattggcaac ttggcagata cgcagttgca CD 951 aaattttgat acggatgcgc gcaacgaaac tactcgatta gcaatgaTgt CD 1001 atgacgagct aaatattcag ctactactgc ggctagcaac caacgcaatt CD 1051 agcattgcca ctttatttcc cctactgata ttcgggcgaa agagactcgc CD 1101 ggttttaaat tccTggattc aagagtTatt ttatagttta aatgacacaa CD 1151 tgaaggcgtt ttccatcctt ctattaactg atttatgtgt agggtttcac CD 1201 tcgccccatg gttgggaaat actagtacag tcccttttcg aatattttgg CD 1251 gttgactccc aataaatatg taactcctTg cttcgtctca acctttccag CD 1301 ttattttaga tacgctattt aagtattgga tctttcgtca cttaaatcga CD 1351 acatctcctt caattgtagc aacttatcat acaatgagtg aatga SQ SEQUENCE 465 AA; MAAGNSSWAR AAFTFKATVF KKSRYVIYYS LLEHRFSLSL WGILKYSGIY FCTEILRSFP KKRCKSHPYR VDGYPAGSCL DPPLHEPLDT STPKKISLVS CSNSYMRNKT DNGKVGSRNV SEYKLEGDFA STSKSIYYKL NNLEKMNRKL AWIEAVSSEF SFWEKLRSKQ IFPFQNEKDL IAEPFNYELA VSHRRPVIYE SISLVPRSVT RTLSRFKAEL TNQSNLNLSV HNKFDLAKNQ ASVSLQYVGF LLFLFPIQIA IENWFLEPRI RGWWNIRQIQ LFSNVFQEEN ALKQLREAEA LFWLDDVIGN LADTQLQNFD TDARNETTRL AMMYDELNIQ LLLRLATNAI SIATLFPLLI FGRKRLAVLN SWIQELFYSL NDTMKAFSIL LLTDLCVGFH SPHGWEILVQ SLFEYFGLTP NKYVTPCFVS TFPVILDTLF KYWIFRHLNR TSPSIVATYH TMSE* // ID AY178864_37 STANDARD; PRT; 322 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : petA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29404.2 FT PROTEIN_NAME : cytochrome f FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 58032 - 58997 FT DIRECTIONS : positive FT EDITING : 91 W(Tgg) -> R(Cgg) FT EDITING : 94 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 966 NT; CD 1 atgcaaacag cgattaccaa aaagtggatg aaggaatggt ggattttatc CD 51 actggcggca ttaatcagtt ttggcaaatt aagctgtcca tctgtatcaa CD 101 atgcatatcc aatttttgcg caacagaact acgaaaatcc acgcgaagcc CD 151 acaggtcgta ttgtgtgtgc caattgtcat ttagccaaaa aaactgttga CD 201 tcttgaggct ccgcaatctg ttcttcccga tactgtattc gaagcaattg CD 251 ttaagattcc ttacgacacg TggataaaaT aagtactagc aaatggtaaa CD 301 aagggggggc tgaatgtcgg cgccgttctc atcttacccg aaggatttga CD 351 attagctccc cctaatcgta ttccaaccga attaaaaaat aaattaggaa CD 401 aattatcgtt tcaaacttac cgacccggtg aaaaaaatat aattgtcgta CD 451 ggtccagtac cgggcaagtt atacagcgag attatattcc cagttttatc CD 501 accagacccc ggtaccaata aagaagcaca ttttttaaaa taccctattt CD 551 acgtaggggg aaacaggggg aggggacaaa tctatccgga tgggagcaag CD 601 agtaacaaca cggtttatac cgcttcagcg acgggaaaaa taaagaggat CD 651 tactcggaaa gagggaaaag gtgggtacga aattatcatt gaggagtcat CD 701 ccgggggtcg tgaagcaatt gatgttgtac ctcccggccc cgaacttatt CD 751 gtttcggaag gtgagtttgt taaagcggat caaccgttaa ctaataaccc CD 801 caatgtcggg ggattcggtc agggagaagt agaaatcgta ctacaagatc CD 851 cccgtcggat ccaaggtctc ttagctttct ttgcatcggt tgttttagca CD 901 cagatttttc ttgtgcttaa gaagaaacag tttgaaaaag tccagttggc CD 951 tgaaatgaat ttctga FT EDITED CDNA CD 1 atgcaaacag cgattaccaa aaagtggatg aaggaatggt ggattttatc CD 51 actggcggca ttaatcagtt ttggcaaatt aagctgtcca tctgtatcaa CD 101 atgcatatcc aatttttgcg caacagaact acgaaaatcc acgcgaagcc CD 151 acaggtcgta ttgtgtgtgc caattgtcat ttagccaaaa aaactgttga CD 201 tcttgaggct ccgcaatctg ttcttcccga tactgtattc gaagcaattg CD 251 ttaagattcc ttacgacacg CggataaaaC aagtactagc aaatggtaaa CD 301 aagggggggc tgaatgtcgg cgccgttctc atcttacccg aaggatttga CD 351 attagctccc cctaatcgta ttccaaccga attaaaaaat aaattaggaa CD 401 aattatcgtt tcaaacttac cgacccggtg aaaaaaatat aattgtcgta CD 451 ggtccagtac cgggcaagtt atacagcgag attatattcc cagttttatc CD 501 accagacccc ggtaccaata aagaagcaca ttttttaaaa taccctattt CD 551 acgtaggggg aaacaggggg aggggacaaa tctatccgga tgggagcaag CD 601 agtaacaaca cggtttatac cgcttcagcg acgggaaaaa taaagaggat CD 651 tactcggaaa gagggaaaag gtgggtacga aattatcatt gaggagtcat CD 701 ccgggggtcg tgaagcaatt gatgttgtac ctcccggccc cgaacttatt CD 751 gtttcggaag gtgagtttgt taaagcggat caaccgttaa ctaataaccc CD 801 caatgtcggg ggattcggtc agggagaagt agaaatcgta ctacaagatc CD 851 cccgtcggat ccaaggtctc ttagctttct ttgcatcggt tgttttagca CD 901 cagatttttc ttgtgcttaa gaagaaacag tttgaaaaag tccagttggc CD 951 tgaaatgaat ttctga SQ SEQUENCE 322 AA; MQTAITKKWM KEWWILSLAA LISFGKLSCP SVSNAYPIFA QQNYENPREA TGRIVCANCH LAKKTVDLEA PQSVLPDTVF EAIVKIPYDT RIKQVLANGK KGGLNVGAVL ILPEGFELAP PNRIPTELKN KLGKLSFQTY RPGEKNIIVV GPVPGKLYSE IIFPVLSPDP GTNKEAHFLK YPIYVGGNRG RGQIYPDGSK SNNTVYTASA TGKIKRITRK EGKGGYEIII EESSGGREAI DVVPPGPELI VSEGEFVKAD QPLTNNPNVG GFGQGEVEIV LQDPRRIQGL LAFFASVVLA QIFLVLKKKQ FEKVQLAEMN F* // ID AY178864_38 STANDARD; PRT; 41 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbJ FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29405.2 FT PROTEIN_NAME : photosystem II protein J FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 59741 - 59863 FT DIRECTIONS : negative FT EDITING : 11 R(Cgg) -> W(Tgg) FT EDITING : 25 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 123 NT; CD 1 atgacaaata ccactggaag ggttcccttg Cggttggtag gtactgtagc CD 51 cggtacactt gtgataggtt tgcCgggtgt atttttttac ggagcttatt CD 101 cggggttagg atcatctctc tag FT EDITED CDNA CD 1 atgacaaata ccactggaag ggttcccttg Tggttggtag gtactgtagc CD 51 cggtacactt gtgataggtt tgcTgggtgt atttttttac ggagcttatt CD 101 cggggttagg atcatctctc tag SQ SEQUENCE 41 AA; MTNTTGRVPL WLVGTVAGTL VIGLLGVFFY GAYSGLGSSL * // ID AY178864_39 STANDARD; PRT; 39 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29406.2 FT PROTEIN_NAME : photosystem II protein L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 59984 - 60100 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 13 P(cCg) -> L(cTg) FT EDITING : 20 R(Cgg) -> W(Tgg) FT EDITING : 31 P(cCt) -> L(cTt) FT EDITING : 32 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaac caaatccaaa taagcagagc gtggagcCga atcgtacaag CD 51 cctttatCgg ggactattgc tgattttcgt acttgccgtt cCttCttcca CD 101 actatttctt taattag FT EDITED CDNA CD 1 aTgacacaac caaatccaaa taagcagagc gtggagcTga atcgtacaag CD 51 cctttatTgg ggactattgc tgattttcgt acttgccgtt cTttTttcca CD 101 actatttctt taattag SQ SEQUENCE 39 AA; MTQPNPNKQS VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AY178864_40 STANDARD; PRT; 40 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbF FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29407.2 FT PROTEIN_NAME : cytochrome b559 beta chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 60122 - 60241 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 27 S(tCC) -> F(tTT) FT EDITING : 28 P(CCa) -> L(TTa) FT EDITING : 34 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 120 NT; CD 1 aCggctttag ataaaactta tccaattttc actgttagat ggttggctgt CD 51 ccatggatta gctgtaccta cggttttctC CCCagggtct atatcagcta CD 101 Cgcaattcat tcagagatag FT EDITED CDNA CD 1 aTggctttag ataaaactta tccaattttc actgttagat ggttggctgt CD 51 ccatggatta gctgtaccta cggttttctT TTTagggtct atatcagcta CD 101 Tgcaattcat tcagagatag SQ SEQUENCE 40 AA; MALDKTYPIF TVRWLAVHGL AVPTVFFLGS ISAMQFIQR* // ID AY178864_41 STANDARD; PRT; 84 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbE FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29408.2 FT PROTEIN_NAME : cytochrome b559 alpha chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 60251 - 60502 FT DIRECTIONS : negative FT EDITING : 10 F(ttC) -> F(ttT) FT EDITING : 30 P(cCg) -> L(cTg) FT EDITING : 37 S(tCt) -> F(tTt) FT EDITING : 47 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 252 NT; CD 1 atgtctggga atacaggaga gcgccccttC gccgacatca tcactagtat CD 51 tcgatactgg gtcattcaca gcattactat accctcccCg tttatcgcag CD 101 gctggctgtC tgtaagtaca ggtttagctt acgacgtttC tggaagcccc CD 151 cggccaaacg aatatttttc ggagagccga caagaagttc ctctaataac CD 201 tggtcgcttc gactcgctag aacaagttga tgcattcaca aaatcctttt CD 251 ag FT EDITED CDNA CD 1 atgtctggga atacaggaga gcgccccttT gccgacatca tcactagtat CD 51 tcgatactgg gtcattcaca gcattactat accctcccTg tttatcgcag CD 101 gctggctgtT tgtaagtaca ggtttagctt acgacgtttT tggaagcccc CD 151 cggccaaacg aatatttttc ggagagccga caagaagttc ctctaataac CD 201 tggtcgcttc gactcgctag aacaagttga tgcattcaca aaatcctttt CD 251 ag SQ SEQUENCE 84 AA; MSGNTGERPF ADIITSIRYW VIHSITIPSL FIAGWLFVST GLAYDVFGSP RPNEYFSESR QEVPLITGRF DSLEQVDAFT KSF* // ID AY178864_42 STANDARD; PRT; 32 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : petL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29409.2 FT PROTEIN_NAME : cytochrome b6/f complex 3.5 kDa subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 61243 - 61338 FT DIRECTIONS : positive FT EDITING : 4 S(tCa) -> L(tTa) FT EDITING : 32 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 96 NT; CD 1 atgttcactt Cactaagcta ctttgctttt ctgatgctcg cattaacttt CD 51 taccctagct ctatttgttg gattgaacaa aattcagatt ctgCaa FT EDITED CDNA CD 1 atgttcactt Tactaagcta ctttgctttt ctgatgctcg cattaacttt CD 51 taccctagct ctatttgttg gattgaacaa aattcagatt ctgTaa SQ SEQUENCE 32 AA; MFTLLSYFAF LMLALTFTLA LFVGLNKIQI L* // ID AY178864_43 STANDARD; PRT; 39 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : petG FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29410.2 FT PROTEIN_NAME : cytochrome b6/f complex subunit V FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 61506 - 61622 FT DIRECTIONS : positive FT EDITING : 13 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 atggttgaag cattactctc tggaattgtg ttaggttCga ttccaataac CD 51 cctagctgga ttatttgtaa ctgcatacct tcaataccga cggggcgatc CD 101 aattagatat tcgatga FT EDITED CDNA CD 1 atggttgaag cattactctc tggaattgtg ttaggttTga ttccaataac CD 51 cctagctgga ttatttgtaa ctgcatacct tcaataccga cggggcgatc CD 101 aattagatat tcgatga SQ SEQUENCE 39 AA; MVEALLSGIV LGLIPITLAG LFVTAYLQYR RGDQLDIR* // ID AY178864_44 STANDARD; PRT; 43 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psaJ FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29411.2 FT PROTEIN_NAME : photosystem I subunit IX FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 62530 - 62658 FT DIRECTIONS : positive FT EDITING : 29 T(aCa) -> I(aTa) FT CODON_START : 1 CL CDNALEN 129 NT; CD 1 atgcaacatg taaaaatata tctttccaca gcccctgttg tagctacaat CD 51 atggtttggc ttactggctg gtttattaat agaaaCaaat cgattctttc CD 101 cggatgcttt attatttcca tttccctaa FT EDITED CDNA CD 1 atgcaacatg taaaaatata tctttccaca gcccctgttg tagctacaat CD 51 atggtttggc ttactggctg gtttattaat agaaaTaaat cgattctttc CD 101 cggatgcttt attatttcca tttccctaa SQ SEQUENCE 43 AA; MQHVKIYLST APVVATIWFG LLAGLLIEIN RFFPDALLFP FP* // ID AY178864_45 STANDARD; PRT; 67 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl33 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29412.2 FT PROTEIN_NAME : ribosomal protein L33 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 62889 - 63089 FT DIRECTIONS : positive FT EDITING : 48 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 201 NT; CD 1 atggccaata ctaaagatgc aagggtaact attgctttgg aatgtacaag CD 51 ttgtattcag agaaaaacca gtggaaaatc cgcgggtctt tgccgataca CD 101 ctacacgtaa aaatcgtcgt aacacacccg ctcggctgga gtCagagaag CD 151 tattgcttcc attgtcacaa gcataccttg cacaaagagt cgaagaagta CD 201 a FT EDITED CDNA CD 1 atggccaata ctaaagatgc aagggtaact attgctttgg aatgtacaag CD 51 ttgtattcag agaaaaacca gtggaaaatc cgcgggtctt tgccgataca CD 101 ctacacgtaa aaatcgtcgt aacacacccg ctcggctgga gtTagagaag CD 151 tattgcttcc attgtcacaa gcataccttg cacaaagagt cgaagaagta CD 201 a SQ SEQUENCE 67 AA; MANTKDARVT IALECTSCIQ RKTSGKSAGL CRYTTRKNRR NTPARLELEK YCFHCHKHTL HKESKK* // ID AY178864_47 STANDARD; PRT; 119 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl20 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29414.2 FT PROTEIN_NAME : ribosomal protein L20 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 63660 - 64016 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 76 H(Cac) -> Y(Tac) FT EDITING : 101 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 aCgactagag taaaacgagg atctgtggct cggaagtatc gcaaaaacat CD 51 tctcgatttt gtgtccggtt ttcggggggc tcattcaaaa ttgtttagaa CD 101 cggcaaacca gcgaaggggt aggtctttag cttatgctta tgtagataaa CD 151 aataatagca aaagagcctt tcgccgtctc tggattgctc ggattaatgc CD 201 agcagcgcgg agagatggaa ttaccCacag ttcggtaatt catagtttgt CD 251 acaaaaatcg gattgccttg aatcgcaaga cacttgctca aatcgctact CD 301 cCagatgcct actgtttttc tatgatcata gaaaaagtta gcaaaataaa CD 351 aatttga FT EDITED CDNA CD 1 aTgactagag taaaacgagg atctgtggct cggaagtatc gcaaaaacat CD 51 tctcgatttt gtgtccggtt ttcggggggc tcattcaaaa ttgtttagaa CD 101 cggcaaacca gcgaaggggt aggtctttag cttatgctta tgtagataaa CD 151 aataatagca aaagagcctt tcgccgtctc tggattgctc ggattaatgc CD 201 agcagcgcgg agagatggaa ttaccTacag ttcggtaatt catagtttgt CD 251 acaaaaatcg gattgccttg aatcgcaaga cacttgctca aatcgctact CD 301 cTagatgcct actgtttttc tatgatcata gaaaaagtta gcaaaataaa CD 351 aatttga SQ SEQUENCE 119 AA; MTRVKRGSVA RKYRKNILDF VSGFRGAHSK LFRTANQRRG RSLAYAYVDK NNSKRAFRRL WIARINAAAR RDGITYSSVI HSLYKNRIAL NRKTLAQIAT LDAYCFSMII EKVSKIKI* // ID AY178864_48 STANDARD; PRT; 201 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : clpP FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29415.2 FT PROTEIN_NAME : ATP-dependent Clp protease proteolytic subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 24/2 FT INTRON 122/0 FT EDITING : 65 S(tCg) -> L(tTg) FT EDITING : 105 S(tCt) -> F(tTt) FT EDITING : 107 S(tCg) -> L(tTg) FT EDITING : 147 A(gCg) -> V(gTg) FT EDITING : 148 S(tCg) -> L(tTg) FT EDITING : 190 A(gCg) -> V(gTg) FT CODON_START : 1 CL CDNALEN 603 NT; CD 1 atgccaattg gtgttccaaa agtgcccttt cgtctacccg gggaagagga CD 51 tgcagtttgg gttgacgtat acaaccggct ttatcgagaa aggcttcttt CD 101 tcctaggtca acaagtcgat gacgaaattg ccaatcaact tattggtatc CD 151 atgatgtatc taaatagcga agatcaggcc aaagatatgt attCgtatgt CD 201 aaattccccc ggcggggcag tattagccgg aatatctgtt tacgacgcga CD 251 tgcaatttgt tgtaccagat gtacatacta tttgcatggg actcgccgct CD 301 tcaatgggat cttCtatttC ggctggagga gagattacca gacgtatagc CD 351 actgccccac gctagggtga tgattcatca acccgctagt tcatattatg CD 401 acggacaggc tggagaatgt gtcatggaag cggaggaagC gtCgaaacta CD 451 cgtgattgta taaccaaagt ttatgcccaa agaactggca aacctttgtg CD 501 gttaatttcc gaggacatgg aaagagatgt atttttgtca gcggaagaag CD 551 cccaggatta cggtgttgCg gatctagtag cggtggaaaa tgtttcacgc CD 601 tga FT EDITED CDNA CD 1 atgccaattg gtgttccaaa agtgcccttt cgtctacccg gggaagagga CD 51 tgcagtttgg gttgacgtat acaaccggct ttatcgagaa aggcttcttt CD 101 tcctaggtca acaagtcgat gacgaaattg ccaatcaact tattggtatc CD 151 atgatgtatc taaatagcga agatcaggcc aaagatatgt attTgtatgt CD 201 aaattccccc ggcggggcag tattagccgg aatatctgtt tacgacgcga CD 251 tgcaatttgt tgtaccagat gtacatacta tttgcatggg actcgccgct CD 301 tcaatgggat cttTtatttT ggctggagga gagattacca gacgtatagc CD 351 actgccccac gctagggtga tgattcatca acccgctagt tcatattatg CD 401 acggacaggc tggagaatgt gtcatggaag cggaggaagT gtTgaaacta CD 451 cgtgattgta taaccaaagt ttatgcccaa agaactggca aacctttgtg CD 501 gttaatttcc gaggacatgg aaagagatgt atttttgtca gcggaagaag CD 551 cccaggatta cggtgttgTg gatctagtag cggtggaaaa tgtttcacgc CD 601 tga SQ SEQUENCE 201 AA; MPIGVPKVPF RLPGEEDAVW VDVYNRLYRE RLLFLGQQVD DEIANQLIGI MMYLNSEDQA KDMYLYVNSP GGAVLAGISV YDAMQFVVPD VHTICMGLAA SMGSFILAGG EITRRIALPH ARVMIHQPAS SYYDGQAGEC VMEAEEVLKL RDCITKVYAQ RTGKPLWLIS EDMERDVFLS AEEAQDYGVV DLVAVENVSR * // ID AY178864_49 STANDARD; PRT; 509 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29416.2 FT PROTEIN_NAME : photosystem II 47 kDa protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 67792 - 69318 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 39 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1527 NT; CD 1 aCgggtttgc cttggtatcg cgttcacacc gtcgtattaa acgaccccgg CD 51 tcgtctaatt tccgtacatc tgatgcatac agctttggtc tccggctggg CD 101 cgggctcgat ggcttCatat gaattagcgg tttttgatcc atctgacccc CD 151 gttctcgatc caatgtggag gcagggtatg tttgtcattc cctttatgac CD 201 tcgcattggg gtatcaaaat cttggggggg ttggattatc acaggagata CD 251 cctcaacaga cgcgggtatc tggagttacg aaggcgtagc cgcagctcat CD 301 atcatactat ctggcttgct gtttctagct gctatatggc actgggtata CD 351 ttgggacctg gatctatttc gtgacgatcg tacgggaaaa ccatccctgg CD 401 atttacctaa gatatttgga attcacctat ttctttcagg agtactttgt CD 451 ttttcatttg gggcgtttca cgtaactggt ttatttggtc ccggcatttg CD 501 gatctcagat ccatacggat taactggaaa agtggaaccc gtagacccgg CD 551 cttggggggc tgagggcttc gatccattca ttccaggcgg aatagcgtcg CD 601 catcatatag cagcaggagt gttaggtata ctcgccggat tgttccatct CD 651 aagtgtccgc cctccccaga ggttgtacaa agctttacgc atgggaaacg CD 701 ttgaaaccgt attatctagc agtattgccg ccgtcttttt tgccgccttc CD 751 gtagtttctg gaaccatgtg gtacggatcc gccgccactc cgattgaatt CD 801 gtttggccct acccgctacc aatgggatca aggatatttt caacaagaga CD 851 tagaaagacg aatacgatta ggcgaagctg aaaatctcag cttatcccaa CD 901 gtttggtcaa agattccgga aaaattggct ttttatgatt acattggcaa CD 951 caatcctgcg aagggtggat tgtttagggc gggtgcaatg gacaacggag CD 1001 atggcatagc tgtcggttgg ttaggtcatg cccttttcaa ggatagggaa CD 1051 ggacgtgagc tgtttgtacg ccgtatgcca accttctttg aaacatttcc CD 1101 ggtcgtcttg gtagatggag aaggtgtcgt aagagctgat gtaccattca CD 1151 gacgagcgga atcaaaatac agtgttgagc aagtgggtgt aaccgtagac CD 1201 tttttcggtg gcgaattaga tggcgccagc tttagtgacc ctgccacagt CD 1251 aaagaaatat gctaggcgtg ctcaattggg cgaaatcttt gaatttgatc CD 1301 gtgcgacttt aaaatcggat ggtgtattca gaagtagtcc acggggttgg CD 1351 ttcactttcg gtcacaccac atttgctctc atttttttct ttggccacat CD 1401 ttggcatggc gcaagaactt tgtttagaga cgtttttgcc ggcatcgacc CD 1451 ccgatttgga cgcccaagtt gaatttggtg catttcagaa gttaggagac CD 1501 ccaagtacca aaaaacaagc cgtttag FT EDITED CDNA CD 1 aTgggtttgc cttggtatcg cgttcacacc gtcgtattaa acgaccccgg CD 51 tcgtctaatt tccgtacatc tgatgcatac agctttggtc tccggctggg CD 101 cgggctcgat ggcttTatat gaattagcgg tttttgatcc atctgacccc CD 151 gttctcgatc caatgtggag gcagggtatg tttgtcattc cctttatgac CD 201 tcgcattggg gtatcaaaat cttggggggg ttggattatc acaggagata CD 251 cctcaacaga cgcgggtatc tggagttacg aaggcgtagc cgcagctcat CD 301 atcatactat ctggcttgct gtttctagct gctatatggc actgggtata CD 351 ttgggacctg gatctatttc gtgacgatcg tacgggaaaa ccatccctgg CD 401 atttacctaa gatatttgga attcacctat ttctttcagg agtactttgt CD 451 ttttcatttg gggcgtttca cgtaactggt ttatttggtc ccggcatttg CD 501 gatctcagat ccatacggat taactggaaa agtggaaccc gtagacccgg CD 551 cttggggggc tgagggcttc gatccattca ttccaggcgg aatagcgtcg CD 601 catcatatag cagcaggagt gttaggtata ctcgccggat tgttccatct CD 651 aagtgtccgc cctccccaga ggttgtacaa agctttacgc atgggaaacg CD 701 ttgaaaccgt attatctagc agtattgccg ccgtcttttt tgccgccttc CD 751 gtagtttctg gaaccatgtg gtacggatcc gccgccactc cgattgaatt CD 801 gtttggccct acccgctacc aatgggatca aggatatttt caacaagaga CD 851 tagaaagacg aatacgatta ggcgaagctg aaaatctcag cttatcccaa CD 901 gtttggtcaa agattccgga aaaattggct ttttatgatt acattggcaa CD 951 caatcctgcg aagggtggat tgtttagggc gggtgcaatg gacaacggag CD 1001 atggcatagc tgtcggttgg ttaggtcatg cccttttcaa ggatagggaa CD 1051 ggacgtgagc tgtttgtacg ccgtatgcca accttctttg aaacatttcc CD 1101 ggtcgtcttg gtagatggag aaggtgtcgt aagagctgat gtaccattca CD 1151 gacgagcgga atcaaaatac agtgttgagc aagtgggtgt aaccgtagac CD 1201 tttttcggtg gcgaattaga tggcgccagc tttagtgacc ctgccacagt CD 1251 aaagaaatat gctaggcgtg ctcaattggg cgaaatcttt gaatttgatc CD 1301 gtgcgacttt aaaatcggat ggtgtattca gaagtagtcc acggggttgg CD 1351 ttcactttcg gtcacaccac atttgctctc atttttttct ttggccacat CD 1401 ttggcatggc gcaagaactt tgtttagaga cgtttttgcc ggcatcgacc CD 1451 ccgatttgga cgcccaagtt gaatttggtg catttcagaa gttaggagac CD 1501 ccaagtacca aaaaacaagc cgtttag SQ SEQUENCE 509 AA; MGLPWYRVHT VVLNDPGRLI SVHLMHTALV SGWAGSMALY ELAVFDPSDP VLDPMWRQGM FVIPFMTRIG VSKSWGGWII TGDTSTDAGI WSYEGVAAAH IILSGLLFLA AIWHWVYWDL DLFRDDRTGK PSLDLPKIFG IHLFLSGVLC FSFGAFHVTG LFGPGIWISD PYGLTGKVEP VDPAWGAEGF DPFIPGGIAS HHIAAGVLGI LAGLFHLSVR PPQRLYKALR MGNVETVLSS SIAAVFFAAF VVSGTMWYGS AATPIELFGP TRYQWDQGYF QQEIERRIRL GEAENLSLSQ VWSKIPEKLA FYDYIGNNPA KGGLFRAGAM DNGDGIAVGW LGHALFKDRE GRELFVRRMP TFFETFPVVL VDGEGVVRAD VPFRRAESKY SVEQVGVTVD FFGGELDGAS FSDPATVKKY ARRAQLGEIF EFDRATLKSD GVFRSSPRGW FTFGHTTFAL IFFFGHIWHG ARTLFRDVFA GIDPDLDAQV EFGAFQKLGD PSTKKQAV* // ID AY178864_50 STANDARD; PRT; 35 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : psbT FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29417.2 FT PROTEIN_NAME : photosystem II protein T FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 69569 - 69673 FT DIRECTIONS : positive FT EDITING : 14 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 105 NT; CD 1 atggaagcac tggtttacac atttttgctg gtagccactt Caggtataat CD 51 ttttttcgca attttttttc gagaacctcc taaggtgcct aacagaggta CD 101 aataa FT EDITED CDNA CD 1 atggaagcac tggtttacac atttttgctg gtagccactt Taggtataat CD 51 ttttttcgca attttttttc gagaacctcc taaggtgcct aacagaggta CD 101 aataa SQ SEQUENCE 35 AA; MEALVYTFLL VATLGIIFFA IFFREPPKVP NRGK* // ID AY178864_53 STANDARD; PRT; 216 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : petB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29420.2 FT PROTEIN_NAME : cytochrome b6 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 3/0 FT EDITING : 42 T(acC) -> T(acT) FT EDITING : 72 T(aCa) -> I(aTa) FT EDITING : 95 P(cCt) -> L(cTt) FT EDITING : 168 S(tCg) -> L(tTg) FT EDITING : 200 P(cCg) -> L(cTg) FT EDITING : 205 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 648 NT; CD 1 atgtctaagg tatatgactg gtttgaagag cgcctcgaaa ttcaggcaat CD 51 tgcggatgat attactagta aatacgtccc tccacatgtg aacatatttt CD 101 actgcttggg aggaatcacg ttaacCtgct ttttagttca aatagctacc CD 151 ggttttgcta tgacctttta ttaccgtcca actgttacgg aagctttttc CD 201 ttctgttcaa tataCaatga ctgaggtaaa ttttggctgg cttattcgtt CD 251 ctgttcaccg ttggtcagca agtatgatgg tacCtgtgat gattctgcat CD 301 gtatttcgtg tttatctaac tgggggattc aaaaaacctc gtgaattgac CD 351 ttgggttact ggagtgattt tagctgtatt aaccgtttct ttcggcgtaa CD 401 ctggatattc cttaccctgg gatcagattg gttactgggc cgttaaaatc CD 451 gtgacaggtg tacccgaagc cattcccttt ataggatctt cattagtaga CD 501 atCgttacgg ggaagtgtga gtgttggaca atccacatta actcgtttct CD 551 acagtttaca cacctttgtc ttgccgcttc ttactgccgt ttttatgcCg CD 601 atgcattttc taaCgattcg taaacaaggc atttcgggtc ccttgtaa FT EDITED CDNA CD 1 atgtctaagg tatatgactg gtttgaagag cgcctcgaaa ttcaggcaat CD 51 tgcggatgat attactagta aatacgtccc tccacatgtg aacatatttt CD 101 actgcttggg aggaatcacg ttaacTtgct ttttagttca aatagctacc CD 151 ggttttgcta tgacctttta ttaccgtcca actgttacgg aagctttttc CD 201 ttctgttcaa tataTaatga ctgaggtaaa ttttggctgg cttattcgtt CD 251 ctgttcaccg ttggtcagca agtatgatgg tacTtgtgat gattctgcat CD 301 gtatttcgtg tttatctaac tgggggattc aaaaaacctc gtgaattgac CD 351 ttgggttact ggagtgattt tagctgtatt aaccgtttct ttcggcgtaa CD 401 ctggatattc cttaccctgg gatcagattg gttactgggc cgttaaaatc CD 451 gtgacaggtg tacccgaagc cattcccttt ataggatctt cattagtaga CD 501 atTgttacgg ggaagtgtga gtgttggaca atccacatta actcgtttct CD 551 acagtttaca cacctttgtc ttgccgcttc ttactgccgt ttttatgcTg CD 601 atgcattttc taaTgattcg taaacaaggc atttcgggtc ccttgtaa SQ SEQUENCE 216 AA; MSKVYDWFEE RLEIQAIADD ITSKYVPPHV NIFYCLGGIT LTCFLVQIAT GFAMTFYYRP TVTEAFSSVQ YIMTEVNFGW LIRSVHRWSA SMMVLVMILH VFRVYLTGGF KKPRELTWVT GVILAVLTVS FGVTGYSLPW DQIGYWAVKI VTGVPEAIPF IGSSLVELLR GSVSVGQSTL TRFYSLHTFV LPLLTAVFML MHFLMIRKQG ISGPL* // ID AY178864_54 STANDARD; PRT; 160 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : petD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29421.2 FT PROTEIN_NAME : cytochrome b6/f complex subunit IV FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 3/2 FT EDITING : 36 S(tCa) -> L(tTa) FT EDITING : 99 P(cCg) -> L(cTg) FT EDITING : 142 S(tCa) -> L(tTa) FT EDITING : 160 Q(Cag) -> *(Tag) FT CODON_START : 1 CL CDNALEN 480 NT; CD 1 atgggagtaa aaaaacctga cttgaacgat cctgttttgc gggcaaaatt CD 51 agctaaaggc atgggacata attactatgg agaacctgct tggccaaatg CD 101 atctttCata tatatttcct gtagtaatct tagggactgt tgcgtgtact CD 151 gtggggctgg ctgttttgga accatcaatg gttggtgaac cggcaaatcc CD 201 atttgcaact cctttggaaa tattacctga gtggtatttt tttcccgtat CD 251 ttcaaatact tcgtaccgta ccaaataaat tactaggtgt tctccCgatg CD 301 gcgtcggtgc ctgcaggttt attgaccgtt ccttttcttg aaaatgttaa CD 351 taaattccaa aatccgtttc gacgcccagt agccacaaca gtctttgcaa CD 401 ttggcaccgt ggccgccatc tggtCaggca tcggagcaac tttacccata CD 451 gagggatctc taactttggg tctatttCag FT EDITED CDNA CD 1 atgggagtaa aaaaacctga cttgaacgat cctgttttgc gggcaaaatt CD 51 agctaaaggc atgggacata attactatgg agaacctgct tggccaaatg CD 101 atctttTata tatatttcct gtagtaatct tagggactgt tgcgtgtact CD 151 gtggggctgg ctgttttgga accatcaatg gttggtgaac cggcaaatcc CD 201 atttgcaact cctttggaaa tattacctga gtggtatttt tttcccgtat CD 251 ttcaaatact tcgtaccgta ccaaataaat tactaggtgt tctccTgatg CD 301 gcgtcggtgc ctgcaggttt attgaccgtt ccttttcttg aaaatgttaa CD 351 taaattccaa aatccgtttc gacgcccagt agccacaaca gtctttgcaa CD 401 ttggcaccgt ggccgccatc tggtTaggca tcggagcaac tttacccata CD 451 gagggatctc taactttggg tctatttTag SQ SEQUENCE 160 AA; MGVKKPDLND PVLRAKLAKG MGHNYYGEPA WPNDLLYIFP VVILGTVACT VGLAVLEPSM VGEPANPFAT PLEILPEWYF FPVFQILRTV PNKLLGVLLM ASVPAGLLTV PFLENVNKFQ NPFRRPVATT VFAIGTVAAI WLGIGATLPI EGSLTLGLF* // ID AY178864_55 STANDARD; PRT; 346 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpoA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29422.2 FT PROTEIN_NAME : RNA polymerase alpha chain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 73494 - 74531 FT DIRECTIONS : negative FT EDITING : 54 S(tCa) -> L(tTa) FT EDITING : 87 A(gCt) -> V(gTt) FT EDITING : 91 P(cCg) -> L(cTg) FT EDITING : 109 S(tCa) -> L(tTa) FT EDITING : 122 P(cCa) -> L(cTa) FT EDITING : 200 S(tCa) -> L(tTa) FT EDITING : 210 P(cCg) -> L(cTg) FT EDITING : 227 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1038 NT; CD 1 atgcgcaaaa atgagatgtc gacctctaag caggcaattc agtggaaatg CD 51 ccttgaatcc aaaatagaaa gtaagcggct tcattatggt cgtttccttg CD 101 tatctccctt taaaaggggt caagccagta ctgtaggaat tgccatgcgt CD 151 agagccttgt Cacaagagat tgaaggaaca agcataacat gtgcaagatt CD 201 ttgcggagtc gtgcacgagt attccacaat aacgggtctt caagagacaa CD 251 tacatgatgC tttagttaat cCgaaagaga ttgtgcttag gggcgattca CD 301 aaagaagata ttcaagaggc attttCatct gtaacaggtc ctaaagaagt CD 351 aactgcgggc gatcCatcat taccacctgg cgtcgaagca attgacaatt CD 401 cgcaatatat agctaccatt acccaaccaa tatctctaac tattgaatta CD 451 gaaattgaaa aagattgcgg atatcgtata gaaaatctag cgaaatccgg CD 501 aaagggacaa tttcccatcg atgctgtatt tatgcctgtc cgaaacgtga CD 551 attatagcat ccatctattt ggaagtggta gagcgacgca ggaaatctCa CD 601 ttcattgaaa tatggactaa tggcagtcCg acaccacacg aagcacttag CD 651 gaaagcttct gaaaaactca tggacttgcC aaccaccttc ttgtatgtaa CD 701 ggggcggaga cgtatctctc ttcgaaaatg gcgaagattc tcttgatttg CD 751 acgaaatcac catctttaca acctcaattt ggtgatacga ataatttgga CD 801 agaaagggtt ttagaaaata ggtttattga ccaattggaa ttacctgcca CD 851 gagcttttaa ttgtcttaaa agggccgaaa tatacacaat tgcggatttg CD 901 cttaactata gccgagaaga tctgtcaaaa ttaaagaatt tcggtagaaa CD 951 atctgtggat caagtgtccg aagcgttgtg ggaccgtttt gcaaaagaat CD 1001 tacccgacaa aaaaatagtt ctcaatcggc ggaagtaa FT EDITED CDNA CD 1 atgcgcaaaa atgagatgtc gacctctaag caggcaattc agtggaaatg CD 51 ccttgaatcc aaaatagaaa gtaagcggct tcattatggt cgtttccttg CD 101 tatctccctt taaaaggggt caagccagta ctgtaggaat tgccatgcgt CD 151 agagccttgt Tacaagagat tgaaggaaca agcataacat gtgcaagatt CD 201 ttgcggagtc gtgcacgagt attccacaat aacgggtctt caagagacaa CD 251 tacatgatgT tttagttaat cTgaaagaga ttgtgcttag gggcgattca CD 301 aaagaagata ttcaagaggc attttTatct gtaacaggtc ctaaagaagt CD 351 aactgcgggc gatcTatcat taccacctgg cgtcgaagca attgacaatt CD 401 cgcaatatat agctaccatt acccaaccaa tatctctaac tattgaatta CD 451 gaaattgaaa aagattgcgg atatcgtata gaaaatctag cgaaatccgg CD 501 aaagggacaa tttcccatcg atgctgtatt tatgcctgtc cgaaacgtga CD 551 attatagcat ccatctattt ggaagtggta gagcgacgca ggaaatctTa CD 601 ttcattgaaa tatggactaa tggcagtcTg acaccacacg aagcacttag CD 651 gaaagcttct gaaaaactca tggacttgcT aaccaccttc ttgtatgtaa CD 701 ggggcggaga cgtatctctc ttcgaaaatg gcgaagattc tcttgatttg CD 751 acgaaatcac catctttaca acctcaattt ggtgatacga ataatttgga CD 801 agaaagggtt ttagaaaata ggtttattga ccaattggaa ttacctgcca CD 851 gagcttttaa ttgtcttaaa agggccgaaa tatacacaat tgcggatttg CD 901 cttaactata gccgagaaga tctgtcaaaa ttaaagaatt tcggtagaaa CD 951 atctgtggat caagtgtccg aagcgttgtg ggaccgtttt gcaaaagaat CD 1001 tacccgacaa aaaaatagtt ctcaatcggc ggaagtaa SQ SEQUENCE 346 AA; MRKNEMSTSK QAIQWKCLES KIESKRLHYG RFLVSPFKRG QASTVGIAMR RALLQEIEGT SITCARFCGV VHEYSTITGL QETIHDVLVN LKEIVLRGDS KEDIQEAFLS VTGPKEVTAG DLSLPPGVEA IDNSQYIATI TQPISLTIEL EIEKDCGYRI ENLAKSGKGQ FPIDAVFMPV RNVNYSIHLF GSGRATQEIL FIEIWTNGSL TPHEALRKAS EKLMDLLTTF LYVRGGDVSL FENGEDSLDL TKSPSLQPQF GDTNNLEERV LENRFIDQLE LPARAFNCLK RAEIYTIADL LNYSREDLSK LKNFGRKSVD QVSEALWDRF AKELPDKKIV LNRRK* // ID AY178864_57 STANDARD; PRT; 38 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl36 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29424.2 FT PROTEIN_NAME : ribosomal protein L36 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 75034 - 75147 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 114 NT; CD 1 aCgaaaatcc gtgcttccat tcggaaaata tgtgaaaaat gtcgattgat CD 51 tcgtagacgt agacgaatca tggtaatttg ttgcaactca aaacataaac CD 101 agaaacaagg ataa FT EDITED CDNA CD 1 aTgaaaatcc gtgcttccat tcggaaaata tgtgaaaaat gtcgattgat CD 51 tcgtagacgt agacgaatca tggtaatttg ttgcaactca aaacataaac CD 101 agaaacaagg ataa SQ SEQUENCE 38 AA; MKIRASIRKI CEKCRLIRRR RRIMVICCNS KHKQKQG* // ID AY178864_58 STANDARD; PRT; 81 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : infA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29425.2 FT PROTEIN_NAME : translation initiation factor 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 75281 - 75523 FT DIRECTIONS : negative FT EDITING : 23 *(Tga) -> R(Cga) FT EDITING : 26 S(tCg) -> L(tTg) FT EDITING : 55 A(gCt) -> V(gTt) FT CODON_START : 1 CL CDNALEN 243 NT; CD 1 atgaagaaac agaatctcat tgacatggaa ggtacagtta cagaatcttt CD 51 acccaatgcc acgtttTgag cgtgttCgga taatggatgt caagttttga CD 101 ctcatatatc ggggaggatg cgacgcagtt atataagaat actaccagga CD 151 gatagggtaa gagCtgaact gagtccctat gaccttacca agggacgcat CD 201 catctaccgc cttagaagta ggcatacaaa caatagtcag tag FT EDITED CDNA CD 1 atgaagaaac agaatctcat tgacatggaa ggtacagtta cagaatcttt CD 51 acccaatgcc acgtttCgag cgtgttTgga taatggatgt caagttttga CD 101 ctcatatatc ggggaggatg cgacgcagtt atataagaat actaccagga CD 151 gatagggtaa gagTtgaact gagtccctat gaccttacca agggacgcat CD 201 catctaccgc cttagaagta ggcatacaaa caatagtcag tag SQ SEQUENCE 81 AA; MKKQNLIDME GTVTESLPNA TFRACLDNGC QVLTHISGRM RRSYIRILPG DRVRVELSPY DLTKGRIIYR LRSRHTNNSQ * // ID AY178864_59 STANDARD; PRT; 133 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps8 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29426.2 FT PROTEIN_NAME : ribosomal protein S8 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 75639 - 76037 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 129 R(Cgc) -> C(Tgc) FT CODON_START : 1 CL CDNALEN 399 NT; CD 1 aCgaataatg atgccatctc taccacagtt acttcaatca gaaatgcgaa CD 51 tacgaaaaga aaagctatga ctaggatacc agttactaaa atgactagag CD 101 gtatcgtgca aatcttactg gaagaaggtt ttttaaaaag cgtcacggaa CD 151 cacacagagg gggggaaaat ctttatggat gttaaactga gatattttgg CD 201 caaagaaaaa aagccttacg tggcaactat taggtacatt agcaaacccg CD 251 gtctcagaat ctattgcgat catataagaa tccctaagat cttagggggc CD 301 atgggaattg caattttatc aacgtcttat ggactcatta cagatcggga CD 351 agctaggcga agaaaaactg ggggggaaat tctaCgccat atttggtaa FT EDITED CDNA CD 1 aTgaataatg atgccatctc taccacagtt acttcaatca gaaatgcgaa CD 51 tacgaaaaga aaagctatga ctaggatacc agttactaaa atgactagag CD 101 gtatcgtgca aatcttactg gaagaaggtt ttttaaaaag cgtcacggaa CD 151 cacacagagg gggggaaaat ctttatggat gttaaactga gatattttgg CD 201 caaagaaaaa aagccttacg tggcaactat taggtacatt agcaaacccg CD 251 gtctcagaat ctattgcgat catataagaa tccctaagat cttagggggc CD 301 atgggaattg caattttatc aacgtcttat ggactcatta cagatcggga CD 351 agctaggcga agaaaaactg ggggggaaat tctaTgccat atttggtaa SQ SEQUENCE 133 AA; MNNDAISTTV TSIRNANTKR KAMTRIPVTK MTRGIVQILL EEGFLKSVTE HTEGGKIFMD VKLRYFGKEK KPYVATIRYI SKPGLRIYCD HIRIPKILGG MGIAILSTSY GLITDREARR RKTGGEILCH IW* // ID AY178864_60 STANDARD; PRT; 123 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl14 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29427.2 FT PROTEIN_NAME : ribosomal protein L14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 76367 - 76735 FT DIRECTIONS : negative FT EDITING : 64 C(Tgc) -> R(Cgc) FT CODON_START : 1 CL CDNALEN 369 NT; CD 1 atgattcaaa ttcaaagtta tttagatgta gcagataata gcggagctcg CD 51 caagttgatg tgtattcggg tactaggaac cggtaaccgc aaatacgcag CD 101 atataggtga tattattatc gccgtagtca aggaagccgt acccaacatg CD 151 tttttgaaaa gatcggaagt ggttagggca gtggtagtaT gcactcgtag CD 201 ggggttgaag cgacgcaatg gaatggtcct tgagttcgac gacaacgcag CD 251 ccgtcattat caaccaggaa ggaaatccta gaggaactag gatttttggt CD 301 ccagtagcaa gggaattgag ggaatgtaat tttgccagag tagtctcgtt CD 351 agctcccgaa gtgttgtga FT EDITED CDNA CD 1 atgattcaaa ttcaaagtta tttagatgta gcagataata gcggagctcg CD 51 caagttgatg tgtattcggg tactaggaac cggtaaccgc aaatacgcag CD 101 atataggtga tattattatc gccgtagtca aggaagccgt acccaacatg CD 151 tttttgaaaa gatcggaagt ggttagggca gtggtagtaC gcactcgtag CD 201 ggggttgaag cgacgcaatg gaatggtcct tgagttcgac gacaacgcag CD 251 ccgtcattat caaccaggaa ggaaatccta gaggaactag gatttttggt CD 301 ccagtagcaa gggaattgag ggaatgtaat tttgccagag tagtctcgtt CD 351 agctcccgaa gtgttgtga SQ SEQUENCE 123 AA; MIQIQSYLDV ADNSGARKLM CIRVLGTGNR KYADIGDIII AVVKEAVPNM FLKRSEVVRA VVVRTRRGLK RRNGMVLEFD DNAAVIINQE GNPRGTRIFG PVARELRECN FARVVSLAPE VL* // ID AY178864_62 STANDARD; PRT; 218 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29429.2 FT PROTEIN_NAME : ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 78507 - 79160 FT DIRECTIONS : negative FT EDITING : 16 *(Tag) -> Q(Cag) FT EDITING : 22 R(Cgg) -> W(Tgg) FT EDITING : 42 L(ctC) -> L(ctT) FT EDITING : 55 S(tcC) -> S(tcT) FT EDITING : 211 T(aCc) -> I(aTc) FT CODON_START : 1 CL CDNALEN 654 NT; CD 1 atgggacgaa agattcatcc acttggtttt cgactcggtg taagtTagaa CD 51 gcattattct tatCggttcg cccagaagaa ggattatcca aagtttcttg CD 101 aagaggatag aaagatacgc aatctCgtcg aaaaatatat tcaaaaacat CD 151 gtaaaaagtg tttcCaacta cggcggagtt gggcatattg aaatccagcg CD 201 aaaaacagat cttattcaaa ttaatatata tactggattt cctgatttac CD 251 taattgagga acagagtttg ggaattagtc aaatgaagca ggatctgaga CD 301 aaccttttag ggctcgaaag tcagaatctc cgagtaacat taactggtgt CD 351 tatccaaccc tatggagaac cgaagatttt ggcagaacat gttgcctcac CD 401 aactaaaaaa tagagtacct ttccgacgaa ctatgaaaaa aaccattgaa CD 451 atggctggaa gaaccaacgg tgggggcatc aagatacaaa tagccggacg CD 501 tttgaatggt agtgaaatgg ctcgcgtaga atgggctaga gaaggtagag CD 551 ttcccctaca aacggttgaa gccaacataa gttactgcta tcacccggct CD 601 cagacaattt atggagtttt gggtataaag aCctgggtat ttcgggatac CD 651 ttaa FT EDITED CDNA CD 1 atgggacgaa agattcatcc acttggtttt cgactcggtg taagtCagaa CD 51 gcattattct tatTggttcg cccagaagaa ggattatcca aagtttcttg CD 101 aagaggatag aaagatacgc aatctTgtcg aaaaatatat tcaaaaacat CD 151 gtaaaaagtg tttcTaacta cggcggagtt gggcatattg aaatccagcg CD 201 aaaaacagat cttattcaaa ttaatatata tactggattt cctgatttac CD 251 taattgagga acagagtttg ggaattagtc aaatgaagca ggatctgaga CD 301 aaccttttag ggctcgaaag tcagaatctc cgagtaacat taactggtgt CD 351 tatccaaccc tatggagaac cgaagatttt ggcagaacat gttgcctcac CD 401 aactaaaaaa tagagtacct ttccgacgaa ctatgaaaaa aaccattgaa CD 451 atggctggaa gaaccaacgg tgggggcatc aagatacaaa tagccggacg CD 501 tttgaatggt agtgaaatgg ctcgcgtaga atgggctaga gaaggtagag CD 551 ttcccctaca aacggttgaa gccaacataa gttactgcta tcacccggct CD 601 cagacaattt atggagtttt gggtataaag aTctgggtat ttcgggatac CD 651 ttaa SQ SEQUENCE 218 AA; MGRKIHPLGF RLGVSQKHYS YWFAQKKDYP KFLEEDRKIR NLVEKYIQKH VKSVSNYGGV GHIEIQRKTD LIQINIYTGF PDLLIEEQSL GISQMKQDLR NLLGLESQNL RVTLTGVIQP YGEPKILAEH VASQLKNRVP FRRTMKKTIE MAGRTNGGGI KIQIAGRLNG SEMARVEWAR EGRVPLQTVE ANISYCYHPA QTIYGVLGIK IWVFRDT* // ID AY178864_63 STANDARD; PRT; 123 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl22 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29430.2 FT PROTEIN_NAME : ribosomal protein L22 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 79254 - 79622 FT DIRECTIONS : negative FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 44 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 369 NT; CD 1 atgggaaacg taattaaatc gcaagttgga gcgcaagctc tagggaagaa CD 51 tgtccgtgtg tcagttacca aaatgcaacg tattatcgat cgaatacgaa CD 101 attgctcata tgaagaagca cttgtatCac Ccgaattcat gccctatagg CD 151 gcatgttacc cagtatcaca gctggttctt tccgcagctg caaatgcaag CD 201 taataatctt ggactgaata aatccgattt gtttgtcagt aaagcttggg CD 251 tagataactc caaatacctc cgaagatttc gtccacgagc tcaggggcgc CD 301 ggttacccca taaaaaaacc cacgtgtaaa gtaactattc aattgagctc CD 351 aaagtctatt gagaagtga FT EDITED CDNA CD 1 atgggaaacg taattaaatc gcaagttgga gcgcaagctc tagggaagaa CD 51 tgtccgtgtg tcagttacca aaatgcaacg tattatcgat cgaatacgaa CD 101 attgctcata tgaagaagca cttgtatTac Tcgaattcat gccctatagg CD 151 gcatgttacc cagtatcaca gctggttctt tccgcagctg caaatgcaag CD 201 taataatctt ggactgaata aatccgattt gtttgtcagt aaagcttggg CD 251 tagataactc caaatacctc cgaagatttc gtccacgagc tcaggggcgc CD 301 ggttacccca taaaaaaacc cacgtgtaaa gtaactattc aattgagctc CD 351 aaagtctatt gagaagtga SQ SEQUENCE 123 AA; MGNVIKSQVG AQALGKNVRV SVTKMQRIID RIRNCSYEEA LVLLEFMPYR ACYPVSQLVL SAAANASNNL GLNKSDLFVS KAWVDNSKYL RRFRPRAQGR GYPIKKPTCK VTIQLSSKSI EK* // ID AY178864_64 STANDARD; PRT; 93 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps19 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29431.2 FT PROTEIN_NAME : ribosomal protein S19 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 79653 - 79931 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 279 NT; CD 1 aCggcacgtt catcaaaaag aggtcccttt gttgctaatc acttaataag CD 51 agaaattaga aatctcaata tacagaaaaa aagaaaattg attacgactt CD 101 ggtctcgtgc ttccgcgata gttcctatta tgatcggtca cacaattgcc CD 151 gtccataatg gccgagagca tttgcctatt tacgtaaccg atcgaatggt CD 201 aggtcataaa ctgggggaat tcgtacccac ccgaaacttt cggggacatg CD 251 ccaaaagcga taaaggatct cgccgataa FT EDITED CDNA CD 1 aTggcacgtt catcaaaaag aggtcccttt gttgctaatc acttaataag CD 51 agaaattaga aatctcaata tacagaaaaa aagaaaattg attacgactt CD 101 ggtctcgtgc ttccgcgata gttcctatta tgatcggtca cacaattgcc CD 151 gtccataatg gccgagagca tttgcctatt tacgtaaccg atcgaatggt CD 201 aggtcataaa ctgggggaat tcgtacccac ccgaaacttt cggggacatg CD 251 ccaaaagcga taaaggatct cgccgataa SQ SEQUENCE 93 AA; MARSSKRGPF VANHLIREIR NLNIQKKRKL ITTWSRASAI VPIMIGHTIA VHNGREHLPI YVTDRMVGHK LGEFVPTRNF RGHAKSDKGS RR* // ID AY178864_65 STANDARD; PRT; 274 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29432.2 FT PROTEIN_NAME : ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 130/1 FT EDITING : 4 *(Tga) -> R(Cga) FT EDITING : 150 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 822 NT; CD 1 atggttatgT gatcctatag ggactatacc ccgaatgccc gaaagcaaga CD 51 cataccagaa gagggaagac ataaaccctg taagaaatta actcgcggca CD 101 aaatctctgg aaatgggcgc aataataggg gagtaataac aagtagacac CD 151 agggggggtg ctcacaagcg tctatatcgc gaaattgatt ttcgaaggaa CD 201 caagttggat atcgttggaa gagtaggaag tgtcgaatat gatcccaatc CD 251 gtaacgcctt catctgtttg atcaattatg tagatggtga taagaggtat CD 301 atcttacatc caaaaggaat gggaattgga gacatcgttt tatccagccc CD 351 aaacgcatct atctcagcag gaaatgcctt acctctgaca aaaatgcctt CD 401 tagggactat tatacataat atagaattga aatccggaag aggcgcaTaa CD 451 ttagttagat cagccggcac cgtagccaaa gtaattgcaa aggaaggtcg CD 501 actagctaca ctgagattac cttccggcga aattcgctta gtacctagag CD 551 attgtctagc aagtgtgggt cgagttggaa acgtagatat cagtaacaag CD 601 ggcttaaaaa aagcagggtc caaaaggtgg ttgggaagga gacccaaagt CD 651 tagaggttct gccatgaatc ccgtggatca tccacatgga gggggagaag CD 701 ggagaacctc catcggcaga aagaagccat taaccccctg ggggcgagtc CD 751 acactgggta aaagaagtcg agggaaaaaa tgtatcaatc ctctcatact CD 801 tcgtcgacgc aaaagttctt ga FT EDITED CDNA CD 1 atggttatgC gatcctatag ggactatacc ccgaatgccc gaaagcaaga CD 51 cataccagaa gagggaagac ataaaccctg taagaaatta actcgcggca CD 101 aaatctctgg aaatgggcgc aataataggg gagtaataac aagtagacac CD 151 agggggggtg ctcacaagcg tctatatcgc gaaattgatt ttcgaaggaa CD 201 caagttggat atcgttggaa gagtaggaag tgtcgaatat gatcccaatc CD 251 gtaacgcctt catctgtttg atcaattatg tagatggtga taagaggtat CD 301 atcttacatc caaaaggaat gggaattgga gacatcgttt tatccagccc CD 351 aaacgcatct atctcagcag gaaatgcctt acctctgaca aaaatgcctt CD 401 tagggactat tatacataat atagaattga aatccggaag aggcgcaCaa CD 451 ttagttagat cagccggcac cgtagccaaa gtaattgcaa aggaaggtcg CD 501 actagctaca ctgagattac cttccggcga aattcgctta gtacctagag CD 551 attgtctagc aagtgtgggt cgagttggaa acgtagatat cagtaacaag CD 601 ggcttaaaaa aagcagggtc caaaaggtgg ttgggaagga gacccaaagt CD 651 tagaggttct gccatgaatc ccgtggatca tccacatgga gggggagaag CD 701 ggagaacctc catcggcaga aagaagccat taaccccctg ggggcgagtc CD 751 acactgggta aaagaagtcg agggaaaaaa tgtatcaatc ctctcatact CD 801 tcgtcgacgc aaaagttctt ga SQ SEQUENCE 274 AA; MVMRSYRDYT PNARKQDIPE EGRHKPCKKL TRGKISGNGR NNRGVITSRH RGGAHKRLYR EIDFRRNKLD IVGRVGSVEY DPNRNAFICL INYVDGDKRY ILHPKGMGIG DIVLSSPNAS ISAGNALPLT KMPLGTIIHN IELKSGRGAQ LVRSAGTVAK VIAKEGRLAT LRLPSGEIRL VPRDCLASVG RVGNVDISNK GLKKAGSKRW LGRRPKVRGS AMNPVDHPHG GGEGRTSIGR KKPLTPWGRV TLGKRSRGKK CINPLILRRR KSS* // ID AY178864_66 STANDARD; PRT; 94 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl23 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29433.2 FT PROTEIN_NAME : ribosomal protein L23 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 81626 - 81907 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 50 T(aCa) -> I(aTa) FT EDITING : 88 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 282 NT; CD 1 aCggataaat taaaaaatca agtaattact ggaaagtcta ttcgtttatt CD 51 gcaacagaat caatatactt tccaagtgga tttgaaacta actaaaactg CD 101 gaatgaaaga ttggatcgaa cgattttttg acgtcaaggt ggaaggtaCa CD 151 aatagtagtc gaatgacaag taaaaatggg aaaaaaaaaa ataaattgaa CD 201 tattacttac gtaagctata aaaagatgat tgtaagacta aaaaagaatt CD 251 atttcattcc atCatttatg agtcagactt aa FT EDITED CDNA CD 1 aTggataaat taaaaaatca agtaattact ggaaagtcta ttcgtttatt CD 51 gcaacagaat caatatactt tccaagtgga tttgaaacta actaaaactg CD 101 gaatgaaaga ttggatcgaa cgattttttg acgtcaaggt ggaaggtaTa CD 151 aatagtagtc gaatgacaag taaaaatggg aaaaaaaaaa ataaattgaa CD 201 tattacttac gtaagctata aaaagatgat tgtaagacta aaaaagaatt CD 251 atttcattcc atTatttatg agtcagactt aa SQ SEQUENCE 94 AA; MDKLKNQVIT GKSIRLLQQN QYTFQVDLKL TKTGMKDWIE RFFDVKVEGI NSSRMTSKNG KKKNKLNITY VSYKKMIVRL KKNYFIPLFM SQT* // ID AY178864_67 STANDARD; PRT; 151 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT N-terminal not determined FT GENE : rps7 FT NOTE : start codon undetermined FT LOCUS_TAG : FT PROTEIN_ID : AAP29434.2 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 95417 - 95869 FT DIRECTIONS : positive FT EDITING : 1 A(gCg) -> V(gTg) FT EDITING : 47 *(Taa) -> Q(Caa) FT EDITING : 99 S(tCa) -> L(tTa) FT EDITING : 115 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 453 NT; CD 1 gCgaacgaaa ttagaaatat cgaatcggat ccaatttatc gcaatcgatt CD 51 ggcaaacatg ctagttgatc gtatcctgaa aaacggcaaa aaatcactag CD 101 cttatcagat tttttatcag gctatgaagc ggattagaTa aaagacaaat CD 151 aggaacccac tgtctgttct gcgacaggca gtgcgtgggg taactcccga CD 201 tgtagtcaca gaaaccaaac gtgtgggtgg atcaacttat cgagttccca CD 251 ttgaagtagt acctgcaaaa ggaaaagctt tggccatccg gtggtCattg CD 301 atcgcatgtc gaaaacgctc aggtcgaagt atggctttaa ggtCgagtga CD 351 tgaattgata gatgccgcca gaaattctgg gagtgccata cggaagaagg CD 401 aagagactca taaagttgcg gaagctaaca aagcttttgc ccacttccgt CD 451 tag FT EDITED CDNA CD 1 gTgaacgaaa ttagaaatat cgaatcggat ccaatttatc gcaatcgatt CD 51 ggcaaacatg ctagttgatc gtatcctgaa aaacggcaaa aaatcactag CD 101 cttatcagat tttttatcag gctatgaagc ggattagaCa aaagacaaat CD 151 aggaacccac tgtctgttct gcgacaggca gtgcgtgggg taactcccga CD 201 tgtagtcaca gaaaccaaac gtgtgggtgg atcaacttat cgagttccca CD 251 ttgaagtagt acctgcaaaa ggaaaagctt tggccatccg gtggtTattg CD 301 atcgcatgtc gaaaacgctc aggtcgaagt atggctttaa ggtTgagtga CD 351 tgaattgata gatgccgcca gaaattctgg gagtgccata cggaagaagg CD 401 aagagactca taaagttgcg gaagctaaca aagcttttgc ccacttccgt CD 451 tag SQ SEQUENCE 151 AA; VNEIRNIESD PIYRNRLANM LVDRILKNGK KSLAYQIFYQ AMKRIRQKTN RNPLSVLRQA VRGVTPDVVT ETKRVGGSTY RVPIEVVPAK GKALAIRWLL IACRKRSGRS MALRLSDELI DAARNSGSAI RKKEETHKVA EANKAFAHFR * // ID AY178864_69 STANDARD; PRT; 2105 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ycf2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29436.2 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 98198 - 104512 FT DIRECTIONS : positive FT EDITING : 63 *(Tga) -> R(Cga) FT EDITING : 65 L(Cta) -> L(Tta) FT EDITING : 1199 S(tCc) -> F(tTc) FT EDITING : 1232 *(Taa) -> Q(Caa) FT EDITING : 1251 S(agT) -> S(agC) FT EDITING : 1523 S(tCa) -> L(tTa) FT EDITING : 1531 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 6315 NT; CD 1 atggtaaaaa aggtgataga aaaaggaaga ggagtaaggg gccgagatta CD 51 ttcatctaaa gtttgggact tcttagaaat cgatgcatta aactacttct CD 101 ccgaatcatt gaaaaaccac tatctcgaag aacttgtagt tagtccagct CD 151 tccactgctg aacctttcat cagattatct gacttgTgat ttCtaagttt CD 201 actgtttcta cgtaatctgc gtcattcaat aatgaggggt agtggcgtca CD 251 ccctggaaat gctgatgttg ctggcgatac caatttttat gcattgcctg CD 301 agttacaaaa attcgattga taggggtttt gtattagcaa aagtcattga CD 351 tggaggtgag gggataagaa agaaacagac ggaaaattat ggcaatttct CD 401 cctacgattg cttcctccaa ttcaagagat ttttatccgt cggaagagat CD 451 gggaagagag aaatactgga gccctactac ttaggtttga acaaagatat CD 501 ttcaatttct gcaagttctt caaaggagga aagagaaatc cgttatgatg CD 551 tcacgactcc cttgccttcc ggtaggtgga aggcacgcat aatgaggagg CD 601 gattccctac tatttggcgg ggatagattc aaggggaaaa ctgaagggat CD 651 tcaagtggtt cgtgggggta ggtatctgca agatttagtt aggtttttca CD 701 aattctataa aaacttggta gtttccaaaa acggaagtga ctgccaccaa CD 751 aacaattttg attcgttgct tctccgggaa atctgtgaca agcaagatct CD 801 gggtcggtta caagcaatac ggttgggaaa caattcatta agttccgtag CD 851 tattgtaccc ctttgaatct gaatccgcag attcagccga tccccggagg CD 901 gacggatcgg catttccctc tgagcaagaa gtcttttcca acttgtattc CD 951 gtttacgtct cgtgagaaaa caatattgtt tcgcaactct atatctggat CD 1001 tagattatgg agaagatgag ggaggctttc ccgttctaca tgcttattca CD 1051 caagttagaa atcaattaat aaaccgactc accaacttcc tttcgataat CD 1101 taggaaatca aaccttcctc ttggtgggaa aatagttatt gacgtcagta CD 1151 ataggatcaa atccgagaga gtcttttttc catcgggaat gaaaaaaaat CD 1201 atgccgttta ccaaaatatc tggcaagaaa cttaggttag caagtggcgg CD 1251 atacttcgac ttcgttgaga ttttcccaac ctattttaaa gcatccttag CD 1301 agatacctag ggaaacaact aatcaaaatg gaaatactaa ttttttagac CD 1351 gaattggaag gaggggggaa cctagattca atttattctc tagttagatt CD 1401 atatgggcga aatagaatca tacctctcta ctcaacatac atatttcttc CD 1451 tccacgatta tttttgtgcg ttatccactg aatatttctt ccgaatcaaa CD 1501 tattggttgg atggctggac gggtggcaga gtatacatca gtttcacggg CD 1551 aattgcaact gaagaaacag tattcaagtg gaaggatgac gtagagcgtc CD 1601 tatcgaacga atatgttacc tcccatattg gtcagtgtag gaatgttcaa CD 1651 tcaaatctgt atagacggct cgatgcaaca cggaatttgt atgtttcgcc CD 1701 tgttaagaaa ttcttgggag aagcaatgaa gtacaacttg gcagaattaa CD 1751 tctgccgtgt gtcactagtg ggaaacgagt tgctaaataa gactggtgtc CD 1801 agtctccgta gtaccaatag acataccaag aaatattttc accgatttct CD 1851 cgatgtgtta tttctttcca aaatgattgt tgctgaggct actcgccaga CD 1901 aaattctgat agataccgtt gattactgca tcgaaaaatt ggacgacata CD 1951 gattttgaaa aattgaacaa aatggatcgt attgagcttg attttttctc CD 2001 aagtttatcc gatggttaca ttgacgaaga gatacttctt ttcaaaacaa CD 2051 ttcttgaaga aagaaaaagt ttcttagtcg agtctagact gttaacaagt CD 2101 gaaaaatcgg taggctcctc gactgcgcta aaacctgcgt cgaatttcac CD 2151 ctctctcggg ttgtcttgca tcgaagctat ccgagcagga ttctcgggtg CD 2201 aggctctttc tattatgggg agacaaaatt ggaatctgtt tgtgtgtgat CD 2251 ttaagccgtg gggggaattc aattaggaat attggtgaga gtcttccaaa CD 2301 aaacatttcc gatcaaatgg atgaaataaa caactcacct atacggagcc CD 2351 gggctggaaa caactttatc cagagaatca aaaggggttt cttcgtcggg CD 2401 aactgtagca atagttatct cgacgtgtta gaaaactttt atttgagctc CD 2451 cgacgagaaa gccatctcct catctgatat cctttcactt attcacctcc CD 2501 aattgtcaga ttcgttatca tccaattttt cgaaacaaac ggcaggggag CD 2551 gtagctgatc acttactcac accaattcaa cttatttcgc ctaacctgca CD 2601 tgaatccgcg accatagtaa ctcatttgga tggacttccc aattctattt CD 2651 cggatctgaa tgggttactg gcaagtttga gctcatcccc ccgtgaagcg CD 2701 acagactcgt tcctattttc gtgtagtaat gatggagttt ctttggagga CD 2751 ggcgtcgaga aactccgact cgtggtcgga tcatcagcga acccaacctc CD 2801 gtcggaatct gctggtatta gatcgagtca attcggagaa gtttttcaaa CD 2851 gatggattag actcgagaaa tggttccccc acgagtcaag tctatcgaaa CD 2901 cgggttgtct attgagtatt tttgggaacc gaaaaaattg gatacacctt CD 2951 attggtcgct aagattctca ttattcaatg gcgtaacatc aagatttata CD 3001 gcgggatcaa ttggggagga tgttacccgc caagatgcgg ggttcgcaga CD 3051 ttcatctgcc cgggaagaag ctacttgccc gtcccatttc atcaatttca CD 3101 atgaattatc agaagatttg aacagatata agatctcttg gattttctgg CD 3151 agagacagta tcggcgaaaa ttggagctta ttgggagatt atatacccct CD 3201 gttttttacc cccacctggt ggagatactt ctgcgatcta attacaaaag CD 3251 catatccgga aatagtactt aagataagtt acgactcaaa tcatgatctt CD 3301 cgtagaattt ctgaaggaat tgctaggggt ttagtaggta gcgcgaaggg CD 3351 ctatttactc cgaagcctgc aaaggctagg attgatattc ggaaacaatt CD 3401 ctattaatac tatatcatcc gagacagatc ttctcattct cgaaaaaatc CD 3451 cctgataaag cggagatttt acatccgggg gaatggtcgg tatctcaatt CD 3501 ttccaatagg cctatctcct attgctgcat cctctcaata ttacttgttc CD 3551 tcctgtcatt gaaacatcct ttgtctgccg tttcgggttc caattCcttt CD 3601 catttgtgga aacgttttgc tactattgac tatttaacag acccaatgcg CD 3651 tggatcctat ttgagaaagg taatgtattc ccccccgaca agcTaaatgt CD 3701 taacaagaga tctactaatt cattctctca atagattctt gaattgtgta CD 3751 agTaatatac tttttttcct tttcgtgaaa aatgaaattg attcgtggat CD 3801 atttcgtaga gaaagctctg atattttaga tagtaataaa gaactactga CD 3851 ctcaacattt ggtaacgact aagattctct acaggtatgc atcgaaatca CD 3901 aaattcaatt atgatttatc gagcaacaag atttttcatg aaccttaccc CD 3951 gcaagataga tccaacgttt tggcatactt acttcaattc tggcaaaatg CD 4001 atctattggg tcacaagatt cgtaagttgg atcctgcgga gaagtgggct CD 4051 ttttccgccc ttgggagaga tattctattt tcggcaacaa caaggcgaag CD 4101 agacagtcta ctaaatatgc catgtcgtga catacctatt tcactccaat CD 4151 cgggattatt accatccaaa ggaattttgc tagtaggacc tgtagaaact CD 4201 ggcagatcct ctcttattag agatgtagca tccaactcct actttccagt CD 4251 ggtgaaacta ccactcaaaa aattcatata caaccgatct tttttcaata CD 4301 atgtacgtgg aaatttcatc tcgaaagaga gcgtacaccg attaaatatc CD 4351 gtctttgaaa tagcgaaaga aatgtctcct tgtacattat ggattcaaga CD 4401 tattcatgaa ttgaatattt gtcgttcgta taataagcta gaagctgatc CD 4451 ccaaatttct actttgccaa atattgaaga gtattggtca caagctcggc CD 4501 aactccgaca tccgcgagaa tgtcgttatt gccacgactc acgtacctgc CD 4551 gaggatagat ccagcttCag tagctccgaa tcggttaaac Taattaataa CD 4601 attttcggag gtccaatggg cgtcaacgtc agaaagaatt gtcaattcta CD 4651 ttacgtatca aaggtttcga ggtaggggct aatccgactc ttcttgagag CD 4701 tactgtgtct ggaactgcag gttatagtaa acgagattta cttcttctcg CD 4751 ctaatgaagc gttattgata ggtacttcca aagggagaaa gtttgtatgt CD 4801 agcaacacaa ttggattagc tttgcatagg caacattcga ctgttagtga CD 4851 tatgggcaat gagatggaat ctaattctga atgggaaatc tcttcctaca CD 4901 agatggcaga agtaaagaat agtttgacag atatttctct cacaactttt CD 4951 ccatttattg gtcgtgacga gttaaaaatg cgattttatt acttgtctaa CD 5001 ctggtatgtg gaaccttcaa caaccgaatc aacaattgat gaattcacta CD 5051 tgtttttgca tctcccagag ctaatagcca aattagtagc tcgcgattcg CD 5101 ttccaaatgg ataggggaaa agaagataat ttcattgtta tcgacaaact CD 5151 cgtagagaat gacttaaacc tagcttgtgg cgtcctagaa aacctctcga CD 5201 ataatttccc acgtccggaa atttgtaggg gagagagccg gcgcagtaat CD 5251 agttttcctc cccctcttcc tattggaaaa cccaagtatt gctcaggtgt CD 5301 aacctctcta agtcgctctt ccaaatctct gaaaagaggg agaattagta CD 5351 gtctaaccga tttcgagatg caacagtcac ccgaattaag aaactcagcg CD 5401 gcagagatat cgcgtgagat tacttggtcc cgcaaggctt ggcgtctccg CD 5451 tttcctgcga agcgggactt acgaattgat gggggtatta tccgaaccca CD 5501 accatttgta taacttaatt cttctttact acaatcagaa ttacataccc CD 5551 caacaagatt ttgaattcag taagattagg ggaaagagaa gtaagtggcg CD 5601 cgagaaaagc gggtatcttt tcagcttcga gaaatctgtc actaatggaa CD 5651 cagataattc cattaaaaga ttggaaaacc gattggataa tatgttgtta CD 5701 cgtgagcaat ttctcgaatt gggaatctct ggcgattcat ctaatgagta CD 5751 tgaaacacat tgtgatcgat tgaatgaaat gactcgactc ttcggggggc CD 5801 gcttcatctg ggaccccatg cttctgttcc agccagaccc taacattcct CD 5851 tccctgcgcc gcaacttgtt gtcaacgaaa gaactggcac ggaggcttca CD 5901 caccatttac ggtatgagaa ggcagcgcct tcagaagatg tcaaataata CD 5951 aaattaaaga ttttttcctc tatagcgaag agaatccaaa attgaaaccc CD 6001 gactcatctc tcaatcggcg gaataatctt cctctggaag aggaggagcg CD 6051 agattccgaa tacgtcaggg aaacctcttc cgtagatata catctgcaat CD 6101 atccgcagat atttactccc gttcgtttgg gttgctacgc ggtagcggag CD 6151 gatttcccgg aacgatttct tcggtttagg cttctggttc atagaaacaa CD 6201 atggctgaga cggaaccgtt ccccatttcg ggattttctt atttataata CD 6251 tgttgcttga aacttatgaa tatctatcca atccgtttcg gtttggtaaa CD 6301 gcatcactgg attga FT EDITED CDNA CD 1 atggtaaaaa aggtgataga aaaaggaaga ggagtaaggg gccgagatta CD 51 ttcatctaaa gtttgggact tcttagaaat cgatgcatta aactacttct CD 101 ccgaatcatt gaaaaaccac tatctcgaag aacttgtagt tagtccagct CD 151 tccactgctg aacctttcat cagattatct gacttgCgat ttTtaagttt CD 201 actgtttcta cgtaatctgc gtcattcaat aatgaggggt agtggcgtca CD 251 ccctggaaat gctgatgttg ctggcgatac caatttttat gcattgcctg CD 301 agttacaaaa attcgattga taggggtttt gtattagcaa aagtcattga CD 351 tggaggtgag gggataagaa agaaacagac ggaaaattat ggcaatttct CD 401 cctacgattg cttcctccaa ttcaagagat ttttatccgt cggaagagat CD 451 gggaagagag aaatactgga gccctactac ttaggtttga acaaagatat CD 501 ttcaatttct gcaagttctt caaaggagga aagagaaatc cgttatgatg CD 551 tcacgactcc cttgccttcc ggtaggtgga aggcacgcat aatgaggagg CD 601 gattccctac tatttggcgg ggatagattc aaggggaaaa ctgaagggat CD 651 tcaagtggtt cgtgggggta ggtatctgca agatttagtt aggtttttca CD 701 aattctataa aaacttggta gtttccaaaa acggaagtga ctgccaccaa CD 751 aacaattttg attcgttgct tctccgggaa atctgtgaca agcaagatct CD 801 gggtcggtta caagcaatac ggttgggaaa caattcatta agttccgtag CD 851 tattgtaccc ctttgaatct gaatccgcag attcagccga tccccggagg CD 901 gacggatcgg catttccctc tgagcaagaa gtcttttcca acttgtattc CD 951 gtttacgtct cgtgagaaaa caatattgtt tcgcaactct atatctggat CD 1001 tagattatgg agaagatgag ggaggctttc ccgttctaca tgcttattca CD 1051 caagttagaa atcaattaat aaaccgactc accaacttcc tttcgataat CD 1101 taggaaatca aaccttcctc ttggtgggaa aatagttatt gacgtcagta CD 1151 ataggatcaa atccgagaga gtcttttttc catcgggaat gaaaaaaaat CD 1201 atgccgttta ccaaaatatc tggcaagaaa cttaggttag caagtggcgg CD 1251 atacttcgac ttcgttgaga ttttcccaac ctattttaaa gcatccttag CD 1301 agatacctag ggaaacaact aatcaaaatg gaaatactaa ttttttagac CD 1351 gaattggaag gaggggggaa cctagattca atttattctc tagttagatt CD 1401 atatgggcga aatagaatca tacctctcta ctcaacatac atatttcttc CD 1451 tccacgatta tttttgtgcg ttatccactg aatatttctt ccgaatcaaa CD 1501 tattggttgg atggctggac gggtggcaga gtatacatca gtttcacggg CD 1551 aattgcaact gaagaaacag tattcaagtg gaaggatgac gtagagcgtc CD 1601 tatcgaacga atatgttacc tcccatattg gtcagtgtag gaatgttcaa CD 1651 tcaaatctgt atagacggct cgatgcaaca cggaatttgt atgtttcgcc CD 1701 tgttaagaaa ttcttgggag aagcaatgaa gtacaacttg gcagaattaa CD 1751 tctgccgtgt gtcactagtg ggaaacgagt tgctaaataa gactggtgtc CD 1801 agtctccgta gtaccaatag acataccaag aaatattttc accgatttct CD 1851 cgatgtgtta tttctttcca aaatgattgt tgctgaggct actcgccaga CD 1901 aaattctgat agataccgtt gattactgca tcgaaaaatt ggacgacata CD 1951 gattttgaaa aattgaacaa aatggatcgt attgagcttg attttttctc CD 2001 aagtttatcc gatggttaca ttgacgaaga gatacttctt ttcaaaacaa CD 2051 ttcttgaaga aagaaaaagt ttcttagtcg agtctagact gttaacaagt CD 2101 gaaaaatcgg taggctcctc gactgcgcta aaacctgcgt cgaatttcac CD 2151 ctctctcggg ttgtcttgca tcgaagctat ccgagcagga ttctcgggtg CD 2201 aggctctttc tattatgggg agacaaaatt ggaatctgtt tgtgtgtgat CD 2251 ttaagccgtg gggggaattc aattaggaat attggtgaga gtcttccaaa CD 2301 aaacatttcc gatcaaatgg atgaaataaa caactcacct atacggagcc CD 2351 gggctggaaa caactttatc cagagaatca aaaggggttt cttcgtcggg CD 2401 aactgtagca atagttatct cgacgtgtta gaaaactttt atttgagctc CD 2451 cgacgagaaa gccatctcct catctgatat cctttcactt attcacctcc CD 2501 aattgtcaga ttcgttatca tccaattttt cgaaacaaac ggcaggggag CD 2551 gtagctgatc acttactcac accaattcaa cttatttcgc ctaacctgca CD 2601 tgaatccgcg accatagtaa ctcatttgga tggacttccc aattctattt CD 2651 cggatctgaa tgggttactg gcaagtttga gctcatcccc ccgtgaagcg CD 2701 acagactcgt tcctattttc gtgtagtaat gatggagttt ctttggagga CD 2751 ggcgtcgaga aactccgact cgtggtcgga tcatcagcga acccaacctc CD 2801 gtcggaatct gctggtatta gatcgagtca attcggagaa gtttttcaaa CD 2851 gatggattag actcgagaaa tggttccccc acgagtcaag tctatcgaaa CD 2901 cgggttgtct attgagtatt tttgggaacc gaaaaaattg gatacacctt CD 2951 attggtcgct aagattctca ttattcaatg gcgtaacatc aagatttata CD 3001 gcgggatcaa ttggggagga tgttacccgc caagatgcgg ggttcgcaga CD 3051 ttcatctgcc cgggaagaag ctacttgccc gtcccatttc atcaatttca CD 3101 atgaattatc agaagatttg aacagatata agatctcttg gattttctgg CD 3151 agagacagta tcggcgaaaa ttggagctta ttgggagatt atatacccct CD 3201 gttttttacc cccacctggt ggagatactt ctgcgatcta attacaaaag CD 3251 catatccgga aatagtactt aagataagtt acgactcaaa tcatgatctt CD 3301 cgtagaattt ctgaaggaat tgctaggggt ttagtaggta gcgcgaaggg CD 3351 ctatttactc cgaagcctgc aaaggctagg attgatattc ggaaacaatt CD 3401 ctattaatac tatatcatcc gagacagatc ttctcattct cgaaaaaatc CD 3451 cctgataaag cggagatttt acatccgggg gaatggtcgg tatctcaatt CD 3501 ttccaatagg cctatctcct attgctgcat cctctcaata ttacttgttc CD 3551 tcctgtcatt gaaacatcct ttgtctgccg tttcgggttc caattTcttt CD 3601 catttgtgga aacgttttgc tactattgac tatttaacag acccaatgcg CD 3651 tggatcctat ttgagaaagg taatgtattc ccccccgaca agcCaaatgt CD 3701 taacaagaga tctactaatt cattctctca atagattctt gaattgtgta CD 3751 agCaatatac tttttttcct tttcgtgaaa aatgaaattg attcgtggat CD 3801 atttcgtaga gaaagctctg atattttaga tagtaataaa gaactactga CD 3851 ctcaacattt ggtaacgact aagattctct acaggtatgc atcgaaatca CD 3901 aaattcaatt atgatttatc gagcaacaag atttttcatg aaccttaccc CD 3951 gcaagataga tccaacgttt tggcatactt acttcaattc tggcaaaatg CD 4001 atctattggg tcacaagatt cgtaagttgg atcctgcgga gaagtgggct CD 4051 ttttccgccc ttgggagaga tattctattt tcggcaacaa caaggcgaag CD 4101 agacagtcta ctaaatatgc catgtcgtga catacctatt tcactccaat CD 4151 cgggattatt accatccaaa ggaattttgc tagtaggacc tgtagaaact CD 4201 ggcagatcct ctcttattag agatgtagca tccaactcct actttccagt CD 4251 ggtgaaacta ccactcaaaa aattcatata caaccgatct tttttcaata CD 4301 atgtacgtgg aaatttcatc tcgaaagaga gcgtacaccg attaaatatc CD 4351 gtctttgaaa tagcgaaaga aatgtctcct tgtacattat ggattcaaga CD 4401 tattcatgaa ttgaatattt gtcgttcgta taataagcta gaagctgatc CD 4451 ccaaatttct actttgccaa atattgaaga gtattggtca caagctcggc CD 4501 aactccgaca tccgcgagaa tgtcgttatt gccacgactc acgtacctgc CD 4551 gaggatagat ccagcttTag tagctccgaa tcggttaaac Caattaataa CD 4601 attttcggag gtccaatggg cgtcaacgtc agaaagaatt gtcaattcta CD 4651 ttacgtatca aaggtttcga ggtaggggct aatccgactc ttcttgagag CD 4701 tactgtgtct ggaactgcag gttatagtaa acgagattta cttcttctcg CD 4751 ctaatgaagc gttattgata ggtacttcca aagggagaaa gtttgtatgt CD 4801 agcaacacaa ttggattagc tttgcatagg caacattcga ctgttagtga CD 4851 tatgggcaat gagatggaat ctaattctga atgggaaatc tcttcctaca CD 4901 agatggcaga agtaaagaat agtttgacag atatttctct cacaactttt CD 4951 ccatttattg gtcgtgacga gttaaaaatg cgattttatt acttgtctaa CD 5001 ctggtatgtg gaaccttcaa caaccgaatc aacaattgat gaattcacta CD 5051 tgtttttgca tctcccagag ctaatagcca aattagtagc tcgcgattcg CD 5101 ttccaaatgg ataggggaaa agaagataat ttcattgtta tcgacaaact CD 5151 cgtagagaat gacttaaacc tagcttgtgg cgtcctagaa aacctctcga CD 5201 ataatttccc acgtccggaa atttgtaggg gagagagccg gcgcagtaat CD 5251 agttttcctc cccctcttcc tattggaaaa cccaagtatt gctcaggtgt CD 5301 aacctctcta agtcgctctt ccaaatctct gaaaagaggg agaattagta CD 5351 gtctaaccga tttcgagatg caacagtcac ccgaattaag aaactcagcg CD 5401 gcagagatat cgcgtgagat tacttggtcc cgcaaggctt ggcgtctccg CD 5451 tttcctgcga agcgggactt acgaattgat gggggtatta tccgaaccca CD 5501 accatttgta taacttaatt cttctttact acaatcagaa ttacataccc CD 5551 caacaagatt ttgaattcag taagattagg ggaaagagaa gtaagtggcg CD 5601 cgagaaaagc gggtatcttt tcagcttcga gaaatctgtc actaatggaa CD 5651 cagataattc cattaaaaga ttggaaaacc gattggataa tatgttgtta CD 5701 cgtgagcaat ttctcgaatt gggaatctct ggcgattcat ctaatgagta CD 5751 tgaaacacat tgtgatcgat tgaatgaaat gactcgactc ttcggggggc CD 5801 gcttcatctg ggaccccatg cttctgttcc agccagaccc taacattcct CD 5851 tccctgcgcc gcaacttgtt gtcaacgaaa gaactggcac ggaggcttca CD 5901 caccatttac ggtatgagaa ggcagcgcct tcagaagatg tcaaataata CD 5951 aaattaaaga ttttttcctc tatagcgaag agaatccaaa attgaaaccc CD 6001 gactcatctc tcaatcggcg gaataatctt cctctggaag aggaggagcg CD 6051 agattccgaa tacgtcaggg aaacctcttc cgtagatata catctgcaat CD 6101 atccgcagat atttactccc gttcgtttgg gttgctacgc ggtagcggag CD 6151 gatttcccgg aacgatttct tcggtttagg cttctggttc atagaaacaa CD 6201 atggctgaga cggaaccgtt ccccatttcg ggattttctt atttataata CD 6251 tgttgcttga aacttatgaa tatctatcca atccgtttcg gtttggtaaa CD 6301 gcatcactgg attga SQ SEQUENCE 2105 AA; MVKKVIEKGR GVRGRDYSSK VWDFLEIDAL NYFSESLKNH YLEELVVSPA STAEPFIRLS DLRFLSLLFL RNLRHSIMRG SGVTLEMLML LAIPIFMHCL SYKNSIDRGF VLAKVIDGGE GIRKKQTENY GNFSYDCFLQ FKRFLSVGRD GKREILEPYY LGLNKDISIS ASSSKEEREI RYDVTTPLPS GRWKARIMRR DSLLFGGDRF KGKTEGIQVV RGGRYLQDLV RFFKFYKNLV VSKNGSDCHQ NNFDSLLLRE ICDKQDLGRL QAIRLGNNSL SSVVLYPFES ESADSADPRR DGSAFPSEQE VFSNLYSFTS REKTILFRNS ISGLDYGEDE GGFPVLHAYS QVRNQLINRL TNFLSIIRKS NLPLGGKIVI DVSNRIKSER VFFPSGMKKN MPFTKISGKK LRLASGGYFD FVEIFPTYFK ASLEIPRETT NQNGNTNFLD ELEGGGNLDS IYSLVRLYGR NRIIPLYSTY IFLLHDYFCA LSTEYFFRIK YWLDGWTGGR VYISFTGIAT EETVFKWKDD VERLSNEYVT SHIGQCRNVQ SNLYRRLDAT RNLYVSPVKK FLGEAMKYNL AELICRVSLV GNELLNKTGV SLRSTNRHTK KYFHRFLDVL FLSKMIVAEA TRQKILIDTV DYCIEKLDDI DFEKLNKMDR IELDFFSSLS DGYIDEEILL FKTILEERKS FLVESRLLTS EKSVGSSTAL KPASNFTSLG LSCIEAIRAG FSGEALSIMG RQNWNLFVCD LSRGGNSIRN IGESLPKNIS DQMDEINNSP IRSRAGNNFI QRIKRGFFVG NCSNSYLDVL ENFYLSSDEK AISSSDILSL IHLQLSDSLS SNFSKQTAGE VADHLLTPIQ LISPNLHESA TIVTHLDGLP NSISDLNGLL ASLSSSPREA TDSFLFSCSN DGVSLEEASR NSDSWSDHQR TQPRRNLLVL DRVNSEKFFK DGLDSRNGSP TSQVYRNGLS IEYFWEPKKL DTPYWSLRFS LFNGVTSRFI AGSIGEDVTR QDAGFADSSA REEATCPSHF INFNELSEDL NRYKISWIFW RDSIGENWSL LGDYIPLFFT PTWWRYFCDL ITKAYPEIVL KISYDSNHDL RRISEGIARG LVGSAKGYLL RSLQRLGLIF GNNSINTISS ETDLLILEKI PDKAEILHPG EWSVSQFSNR PISYCCILSI LLVLLSLKHP LSAVSGSNFF HLWKRFATID YLTDPMRGSY LRKVMYSPPT SQMLTRDLLI HSLNRFLNCV SNILFFLFVK NEIDSWIFRR ESSDILDSNK ELLTQHLVTT KILYRYASKS KFNYDLSSNK IFHEPYPQDR SNVLAYLLQF WQNDLLGHKI RKLDPAEKWA FSALGRDILF SATTRRRDSL LNMPCRDIPI SLQSGLLPSK GILLVGPVET GRSSLIRDVA SNSYFPVVKL PLKKFIYNRS FFNNVRGNFI SKESVHRLNI VFEIAKEMSP CTLWIQDIHE LNICRSYNKL EADPKFLLCQ ILKSIGHKLG NSDIRENVVI ATTHVPARID PALVAPNRLN QLINFRRSNG RQRQKELSIL LRIKGFEVGA NPTLLESTVS GTAGYSKRDL LLLANEALLI GTSKGRKFVC SNTIGLALHR QHSTVSDMGN EMESNSEWEI SSYKMAEVKN SLTDISLTTF PFIGRDELKM RFYYLSNWYV EPSTTESTID EFTMFLHLPE LIAKLVARDS FQMDRGKEDN FIVIDKLVEN DLNLACGVLE NLSNNFPRPE ICRGESRRSN SFPPPLPIGK PKYCSGVTSL SRSSKSLKRG RISSLTDFEM QQSPELRNSA AEISREITWS RKAWRLRFLR SGTYELMGVL SEPNHLYNLI LLYYNQNYIP QQDFEFSKIR GKRSKWREKS GYLFSFEKSV TNGTDNSIKR LENRLDNMLL REQFLELGIS GDSSNEYETH CDRLNEMTRL FGGRFIWDPM LLFQPDPNIP SLRRNLLSTK ELARRLHTIY GMRRQRLQKM SNNKIKDFFL YSEENPKLKP DSSLNRRNNL PLEEEERDSE YVRETSSVDI HLQYPQIFTP VRLGCYAVAE DFPERFLRFR LLVHRNKWLR RNRSPFRDFL IYNMLLETYE YLSNPFRFGK ASLD* // ID AY178864_70 STANDARD; PRT; 730 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhF FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29437.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 105718 - 107907 FT DIRECTIONS : negative FT EDITING : 13 S(tCg) -> L(tTg) FT EDITING : 52 T(aCg) -> M(aTg) FT EDITING : 132 T(acC) -> T(acT) FT EDITING : 138 S(tCa) -> L(tTa) FT EDITING : 211 *(Tga) -> R(Cga) FT EDITING : 332 S(tCa) -> L(tTa) FT EDITING : 400 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 2190 NT; CD 1 gtgaaacttt caaacgaata cgcttggatt attccttCgt gtccattaat CD 51 agcttcttgt tgcactggat cgttatcatt cttttttcca agagttgcaa CD 101 ggggtttcca tcgcctgtgc gcattgctca acgttttttc attagctatt CD 151 tctaCgtttg tgtcacttgc catatttcag gaacaatttg tgaaaaaccc CD 201 gattcagcaa tatttatgga tttggatacc gagaagtact ttttgcgtag CD 251 aaataggctt tttagtcgat tcacttactt tagtaatgtc actactggtt CD 301 accactgtag gcgtgttagt tatgatttat agcgatagtt atatgtgtta CD 351 tgaccgggga tataccaggt tttatgctta tttgagtttg tttacCgcgt CD 401 caatgttagg gtCagttctc agccccaact taatacagct ttacgtgttt CD 451 tgggagttag ttggaatgtg ttcctatcta ttagtaggtt tttggtttgc CD 501 taggtcaagt gccgcaaatg cttgtcaaaa agcttttgtt accaaccgca CD 551 taggagattt tggattactt ttaggtattc taggtattta ctggacaact CD 601 ggtagtttcg agatttccga attgtgtgat Tgatttgcca aattaaaaga CD 651 aattggattt tccaatccaa tcttgacaaa tatcattgct tttttactcc CD 701 ttgcaggtcc agttgctaaa tctgctcaat ttccgcttca cgtatggctg CD 751 ccagatgcaa tggagggacc cacgcccata tcggccctta ttcacgcagc CD 801 tactatggta gctgccggga tttttttcat tgcccgaatt tatggtctaa CD 851 tttctacgct tcccttagtg atgcaagcca gctcttggct tggtggagca CD 901 acggctttgc tgggtgccac attagctctt gcacaaagag atctaaaaaa CD 951 gggtcttgct tattccacca tgtctcagtt gggatatatg gtttCagccc CD 1001 taggcatcgg cgcttaccaa tctgctctct tccatctcgt gacgcatgcc CD 1051 tattcaaaag ctttattatt tctcggagcc ggttcagtaa ttcactcaat CD 1101 tgaaaaagtt gttggatatt cacctaacag gagtcaaaac atgtttttca CD 1151 tgggtggctt acgtaagtac atgccaatta ctggaactac ttttcttcCg CD 1201 ggtacccttt ctctatctgg aataccgccc ttagcctgtt tttggtccaa CD 1251 agatgagatt attcacgaaa gttggttaag ttctcttcca cttggaattc CD 1301 tagcttctgg cacagcaggt cttacggcgt tttatatgtt tcgtatctat CD 1351 ctccttactt tcgaggggga tttttgcact attaaaacgg attgggttga CD 1401 ctttaaccat tttgcgccat tgtccataag tatgtggggt gaaactgaag CD 1451 gaaatctttc actaaatcaa attaatcaaa atgttgcatc ggtacgattg CD 1501 ggaataacaa aaaacaaagg gttttcgtca tcatatctag caaacccaaa CD 1551 tggaattact aacgtccatt acgatcagag cttgccgaag cctaaagaat CD 1601 cgtcttctgc catgacattt tctctagtga tgcttgcaat acccactaca CD 1651 ttagtaggac tactgggaat taatctcata ggagaaactg ccaattttga CD 1701 attatccccg gagtggttaa ttaatccagt tcactttttc gaacttagta CD 1751 aatctttcaa tatttatata aaaatattgc taaactcgcg tagctcactt CD 1801 attttatctt tttttggaat atttttttcc ttcattattt acaaaaaaag CD 1851 ttataaatat ttttatatta ctaaaaaatt agttggattt accaaattag CD 1901 ttagtaaatt tgggttgctt gttcaatctt ggtcactaaa tcggggttat CD 1951 attgattact attatgatat atgctttgtg cgtaatctaa gatctttaag CD 2001 taagtcactt tcagattttg atcgttacgg aatcgacggt tttgtcaacg CD 2051 taatcggagc cttaaatttt tttggaggag agtttatacg ttacggagaa CD 2101 aatggtagga tatcttatta cttattcata attatttttg gagctatttt CD 2151 atcatcagta ctaatcttca tctttttacc ttttccataa FT EDITED CDNA CD 1 gtgaaacttt caaacgaata cgcttggatt attccttTgt gtccattaat CD 51 agcttcttgt tgcactggat cgttatcatt cttttttcca agagttgcaa CD 101 ggggtttcca tcgcctgtgc gcattgctca acgttttttc attagctatt CD 151 tctaTgtttg tgtcacttgc catatttcag gaacaatttg tgaaaaaccc CD 201 gattcagcaa tatttatgga tttggatacc gagaagtact ttttgcgtag CD 251 aaataggctt tttagtcgat tcacttactt tagtaatgtc actactggtt CD 301 accactgtag gcgtgttagt tatgatttat agcgatagtt atatgtgtta CD 351 tgaccgggga tataccaggt tttatgctta tttgagtttg tttacTgcgt CD 401 caatgttagg gtTagttctc agccccaact taatacagct ttacgtgttt CD 451 tgggagttag ttggaatgtg ttcctatcta ttagtaggtt tttggtttgc CD 501 taggtcaagt gccgcaaatg cttgtcaaaa agcttttgtt accaaccgca CD 551 taggagattt tggattactt ttaggtattc taggtattta ctggacaact CD 601 ggtagtttcg agatttccga attgtgtgat Cgatttgcca aattaaaaga CD 651 aattggattt tccaatccaa tcttgacaaa tatcattgct tttttactcc CD 701 ttgcaggtcc agttgctaaa tctgctcaat ttccgcttca cgtatggctg CD 751 ccagatgcaa tggagggacc cacgcccata tcggccctta ttcacgcagc CD 801 tactatggta gctgccggga tttttttcat tgcccgaatt tatggtctaa CD 851 tttctacgct tcccttagtg atgcaagcca gctcttggct tggtggagca CD 901 acggctttgc tgggtgccac attagctctt gcacaaagag atctaaaaaa CD 951 gggtcttgct tattccacca tgtctcagtt gggatatatg gtttTagccc CD 1001 taggcatcgg cgcttaccaa tctgctctct tccatctcgt gacgcatgcc CD 1051 tattcaaaag ctttattatt tctcggagcc ggttcagtaa ttcactcaat CD 1101 tgaaaaagtt gttggatatt cacctaacag gagtcaaaac atgtttttca CD 1151 tgggtggctt acgtaagtac atgccaatta ctggaactac ttttcttcTg CD 1201 ggtacccttt ctctatctgg aataccgccc ttagcctgtt tttggtccaa CD 1251 agatgagatt attcacgaaa gttggttaag ttctcttcca cttggaattc CD 1301 tagcttctgg cacagcaggt cttacggcgt tttatatgtt tcgtatctat CD 1351 ctccttactt tcgaggggga tttttgcact attaaaacgg attgggttga CD 1401 ctttaaccat tttgcgccat tgtccataag tatgtggggt gaaactgaag CD 1451 gaaatctttc actaaatcaa attaatcaaa atgttgcatc ggtacgattg CD 1501 ggaataacaa aaaacaaagg gttttcgtca tcatatctag caaacccaaa CD 1551 tggaattact aacgtccatt acgatcagag cttgccgaag cctaaagaat CD 1601 cgtcttctgc catgacattt tctctagtga tgcttgcaat acccactaca CD 1651 ttagtaggac tactgggaat taatctcata ggagaaactg ccaattttga CD 1701 attatccccg gagtggttaa ttaatccagt tcactttttc gaacttagta CD 1751 aatctttcaa tatttatata aaaatattgc taaactcgcg tagctcactt CD 1801 attttatctt tttttggaat atttttttcc ttcattattt acaaaaaaag CD 1851 ttataaatat ttttatatta ctaaaaaatt agttggattt accaaattag CD 1901 ttagtaaatt tgggttgctt gttcaatctt ggtcactaaa tcggggttat CD 1951 attgattact attatgatat atgctttgtg cgtaatctaa gatctttaag CD 2001 taagtcactt tcagattttg atcgttacgg aatcgacggt tttgtcaacg CD 2051 taatcggagc cttaaatttt tttggaggag agtttatacg ttacggagaa CD 2101 aatggtagga tatcttatta cttattcata attatttttg gagctatttt CD 2151 atcatcagta ctaatcttca tctttttacc ttttccataa SQ SEQUENCE 730 AA; VKLSNEYAWI IPLCPLIASC CTGSLSFFFP RVARGFHRLC ALLNVFSLAI SMFVSLAIFQ EQFVKNPIQQ YLWIWIPRST FCVEIGFLVD SLTLVMSLLV TTVGVLVMIY SDSYMCYDRG YTRFYAYLSL FTASMLGLVL SPNLIQLYVF WELVGMCSYL LVGFWFARSS AANACQKAFV TNRIGDFGLL LGILGIYWTT GSFEISELCD RFAKLKEIGF SNPILTNIIA FLLLAGPVAK SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGIFFIARI YGLISTLPLV MQASSWLGGA TALLGATLAL AQRDLKKGLA YSTMSQLGYM VLALGIGAYQ SALFHLVTHA YSKALLFLGA GSVIHSIEKV VGYSPNRSQN MFFMGGLRKY MPITGTTFLL GTLSLSGIPP LACFWSKDEI IHESWLSSLP LGILASGTAG LTAFYMFRIY LLTFEGDFCT IKTDWVDFNH FAPLSISMWG ETEGNLSLNQ INQNVASVRL GITKNKGFSS SYLANPNGIT NVHYDQSLPK PKESSSAMTF SLVMLAIPTT LVGLLGINLI GETANFELSP EWLINPVHFF ELSKSFNIYI KILLNSRSSL ILSFFGIFFS FIIYKKSYKY FYITKKLVGF TKLVSKFGLL VQSWSLNRGY IDYYYDICFV RNLRSLSKSL SDFDRYGIDG FVNVIGALNF FGGEFIRYGE NGRISYYLFI IIFGAILSSV LIFIFLPFP* // ID AY178864_71 STANDARD; PRT; 128 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rpl21 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29438.2 FT PROTEIN_NAME : ribosomal protein L21 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 108188 - 108571 FT DIRECTIONS : positive FT EDITING : 31 H(Cac) -> Y(Tac) FT EDITING : 100 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 384 NT; CD 1 atggaaaaat ggaaagagag agtcagaatt ggtggatacg caattattga CD 51 tattggagga aaacaactac gagtacaacc gggaagattc Cacgatgttc CD 101 gtcattttcc ctcaaattta aatacacggg gatctgacac aaaagtatcc CD 151 atgggtcgag tcttgcttat tcgtgacgga tctaaaatag atattggttc CD 201 tccgtggcta gcgaatgcag tcgtcaaggg acggatctta cataactgtt CD 251 tcgaagataa attggtaata aaaaagattt tttccaaaag aaaaacgTga CD 301 gggagtcgag gatgcagagg aagtataatt agatttgcaa ttgattccat CD 351 ccattttaat tgtagtaatg caactaacaa ataa FT EDITED CDNA CD 1 atggaaaaat ggaaagagag agtcagaatt ggtggatacg caattattga CD 51 tattggagga aaacaactac gagtacaacc gggaagattc Tacgatgttc CD 101 gtcattttcc ctcaaattta aatacacggg gatctgacac aaaagtatcc CD 151 atgggtcgag tcttgcttat tcgtgacgga tctaaaatag atattggttc CD 201 tccgtggcta gcgaatgcag tcgtcaaggg acggatctta cataactgtt CD 251 tcgaagataa attggtaata aaaaagattt tttccaaaag aaaaacgCga CD 301 gggagtcgag gatgcagagg aagtataatt agatttgcaa ttgattccat CD 351 ccattttaat tgtagtaatg caactaacaa ataa SQ SEQUENCE 128 AA; MEKWKERVRI GGYAIIDIGG KQLRVQPGRF YDVRHFPSNL NTRGSDTKVS MGRVLLIRDG SKIDIGSPWL ANAVVKGRIL HNCFEDKLVI KKIFSKRKTR GSRGCRGSII RFAIDSIHFN CSNATNK* // ID AY178864_73 STANDARD; PRT; 317 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ccsA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29440.2 FT PROTEIN_NAME : cytochrome c biogenesis protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 110129 - 111079 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 2 T(aCa) -> I(aTa) FT EDITING : 86 S(tCa) -> L(tTa) FT EDITING : 114 S(tCa) -> L(tTa) FT EDITING : 130 S(tCg) -> L(tTg) FT EDITING : 137 T(aCg) -> M(aTg) FT EDITING : 149 S(tCa) -> L(tTa) FT EDITING : 154 S(tCg) -> L(tTg) FT EDITING : 247 R(Cgg) -> W(Tgg) FT EDITING : 264 R(Cgg) -> W(Tgg) FT EDITING : 269 T(aCt) -> I(aTt) FT EDITING : 286 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 951 NT; CD 1 aCgaCatata caggcataga gtacatattt gttaatattt cgtttgtgat CD 51 gttttttttc gtaactttgt tgaacctcat caatttattt tacaaaattg CD 101 ataaaattga tcatttcagc aaaaatagca tgacaattgc ttttttctgt CD 151 actacaggat ttctgattac tcgctacctc caaaccaggc acttaccgct CD 201 aggtaatctg tacgagtcgc taatgtttct atcgtggggc ttctccttat CD 251 tatattCaat tttagaagtt agagaccaaa ttggtttatc gcatgcagta CD 301 ctcgcacctg gtgctatgtt gattcacgcc ttcgcaactt Caagtcttcc CD 351 ccagcaaatg cgttccccca cgttgttagt acccgcttCg cagtctcagt CD 401 ggttaatgaC gcatgtaagt gcgatgttga ttagttatat aacctCattg CD 451 tgtgggtctt Cgctagcaat aactttatta agtttattct acggcaaggt CD 501 aggtagtgta actttggaac acaagtttga aaaacaatct ttcttttttt CD 551 tgatgaaccc tcgtaagaat ctgtggaaac aaaccggtgc agaaaactat CD 601 tcctacttcc tcatctccaa ctcacggaag tgccaattga ttaattgctt CD 651 ggataagtgg gcttgccaaa caataagttt ggggttttct ctgttgacta CD 701 ttggtatact ttctggcgca gtgtgggcta atgaagctCg gggatcttac CD 751 tggagttggg acccaaaaga gacttgggcg ttggtaactC ggttagtata CD 801 tgctaCttac cttcatacaa aggtggataa gagaaagatg ggggagggac CD 851 cggccaCgac agcatctatg ggatttttct tagtttggat ttgtttcttg CD 901 ggagtcaatt tattaggagt tggattgcat aattacggat ggttagcgta CD 951 a FT EDITED CDNA CD 1 aTgaTatata caggcataga gtacatattt gttaatattt cgtttgtgat CD 51 gttttttttc gtaactttgt tgaacctcat caatttattt tacaaaattg CD 101 ataaaattga tcatttcagc aaaaatagca tgacaattgc ttttttctgt CD 151 actacaggat ttctgattac tcgctacctc caaaccaggc acttaccgct CD 201 aggtaatctg tacgagtcgc taatgtttct atcgtggggc ttctccttat CD 251 tatattTaat tttagaagtt agagaccaaa ttggtttatc gcatgcagta CD 301 ctcgcacctg gtgctatgtt gattcacgcc ttcgcaactt Taagtcttcc CD 351 ccagcaaatg cgttccccca cgttgttagt acccgcttTg cagtctcagt CD 401 ggttaatgaT gcatgtaagt gcgatgttga ttagttatat aacctTattg CD 451 tgtgggtctt Tgctagcaat aactttatta agtttattct acggcaaggt CD 501 aggtagtgta actttggaac acaagtttga aaaacaatct ttcttttttt CD 551 tgatgaaccc tcgtaagaat ctgtggaaac aaaccggtgc agaaaactat CD 601 tcctacttcc tcatctccaa ctcacggaag tgccaattga ttaattgctt CD 651 ggataagtgg gcttgccaaa caataagttt ggggttttct ctgttgacta CD 701 ttggtatact ttctggcgca gtgtgggcta atgaagctTg gggatcttac CD 751 tggagttggg acccaaaaga gacttgggcg ttggtaactT ggttagtata CD 801 tgctaTttac cttcatacaa aggtggataa gagaaagatg ggggagggac CD 851 cggccaTgac agcatctatg ggatttttct tagtttggat ttgtttcttg CD 901 ggagtcaatt tattaggagt tggattgcat aattacggat ggttagcgta CD 951 a SQ SEQUENCE 317 AA; MIYTGIEYIF VNISFVMFFF VTLLNLINLF YKIDKIDHFS KNSMTIAFFC TTGFLITRYL QTRHLPLGNL YESLMFLSWG FSLLYLILEV RDQIGLSHAV LAPGAMLIHA FATLSLPQQM RSPTLLVPAL QSQWLMMHVS AMLISYITLL CGSLLAITLL SLFYGKVGSV TLEHKFEKQS FFFLMNPRKN LWKQTGAENY SYFLISNSRK CQLINCLDKW ACQTISLGFS LLTIGILSGA VWANEAWGSY WSWDPKETWA LVTWLVYAIY LHTKVDKRKM GEGPAMTASM GFFLVWICFL GVNLLGVGLH NYGWLA* // ID AY178864_74 STANDARD; PRT; 498 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29441.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 111496 - 112989 FT DIRECTIONS : negative FT EDITING : 7 R(Cgg) -> W(Tgg) FT EDITING : 47 P(cCa) -> L(cTa) FT EDITING : 458 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 1494 NT; CD 1 atgattagta atgtacctCg gttaacggta atcgtttccc tcccaatttt CD 51 tgctggtctg atgattccaa tcctgcctcg taatggaaac agagtcactc CD 101 gatggtatac tctgggtatt tgcatattgg aatttttacC aattacttac CD 151 atattttatt gtcattttcg aatcgattat cagtcaatcc agttgttgga CD 201 aacttttaac tggataaaca atatccatct tcactggtca ttaggaatcg CD 251 acgggctttc cctcggtctt gtcatattga cgggttttgc aactactctg CD 301 gcaaccttat cggcttggcc tatcactcgt aatacacggc tattttactt CD 351 tttaatgctg attatgtatg gcggccaaat tggattattt gtttcccgag CD 401 acattttgct ttttttcttt atgtgggaaa tagaactcat tccagtctat CD 451 ttactactat gtttatgggg cggaaaaaga cgtttatact cagccacgaa CD 501 atttgtccta tacacagctg gtggctcaat atttttattg gtggcggctt CD 551 tgactatgag tttttatggt agcgaggttc cttcttttaa tattcaggat CD 601 ttgatacata aatcatatcc cctttcgtta gaagtactaa tctacgtagg CD 651 tttcttggtg gcttatgccg tgaaattgcc tatctttccc ttccatacct CD 701 ggttaccaga tactcatggg gaggcacact acagcacatg tatgttatta CD 751 gccggagtgc tgttaaaaat gggtggatac ggacttattc gaattaattt CD 801 ggaattatta actcatgcac attttttact tggatcgtgg atgatgttat CD 851 ttggagcgat tcaaattata tacgcctcct taatttcaat gagtcagcgc CD 901 aattttaaaa gaagaatagc ttattcttcc atttctcata tgggttttgt CD 951 aaccatcgga atcggttctt ttacagagac aggtattaat ggagctatat CD 1001 tacaaatgat ttcccacggt ttgattggag ctgccttatt tttcctcgca CD 1051 ggtacctgtt acgacagaac tcgaacttat ctactagatc aattgggagg CD 1101 ggctgctatt tcaatgccta aattatttac catgtttagc accctttcgt CD 1151 tggcttctct tgcattaccg ggaatgagtg gtttcgtgtc ggaattgcta CD 1201 gtttttttgg gagttgttac ttctaatcaa tattcttttg cctttaaggc CD 1251 gggaattacg gtgctagagg gaattggtac ggtattaact cccatctact CD 1301 tactatcaat gttacgccaa ctattttatg gttacaggtt ttttgacaaa CD 1351 tcaaatcctt actcaattga tcCtggtcca agagaattat ttattctaat CD 1401 ttgttttctc ctaccaatac taggtatcgg tttataccca aatttgattt CD 1451 tatctattgg gagtactgaa atcccttccc tcccacttac atga FT EDITED CDNA CD 1 atgattagta atgtacctTg gttaacggta atcgtttccc tcccaatttt CD 51 tgctggtctg atgattccaa tcctgcctcg taatggaaac agagtcactc CD 101 gatggtatac tctgggtatt tgcatattgg aatttttacT aattacttac CD 151 atattttatt gtcattttcg aatcgattat cagtcaatcc agttgttgga CD 201 aacttttaac tggataaaca atatccatct tcactggtca ttaggaatcg CD 251 acgggctttc cctcggtctt gtcatattga cgggttttgc aactactctg CD 301 gcaaccttat cggcttggcc tatcactcgt aatacacggc tattttactt CD 351 tttaatgctg attatgtatg gcggccaaat tggattattt gtttcccgag CD 401 acattttgct ttttttcttt atgtgggaaa tagaactcat tccagtctat CD 451 ttactactat gtttatgggg cggaaaaaga cgtttatact cagccacgaa CD 501 atttgtccta tacacagctg gtggctcaat atttttattg gtggcggctt CD 551 tgactatgag tttttatggt agcgaggttc cttcttttaa tattcaggat CD 601 ttgatacata aatcatatcc cctttcgtta gaagtactaa tctacgtagg CD 651 tttcttggtg gcttatgccg tgaaattgcc tatctttccc ttccatacct CD 701 ggttaccaga tactcatggg gaggcacact acagcacatg tatgttatta CD 751 gccggagtgc tgttaaaaat gggtggatac ggacttattc gaattaattt CD 801 ggaattatta actcatgcac attttttact tggatcgtgg atgatgttat CD 851 ttggagcgat tcaaattata tacgcctcct taatttcaat gagtcagcgc CD 901 aattttaaaa gaagaatagc ttattcttcc atttctcata tgggttttgt CD 951 aaccatcgga atcggttctt ttacagagac aggtattaat ggagctatat CD 1001 tacaaatgat ttcccacggt ttgattggag ctgccttatt tttcctcgca CD 1051 ggtacctgtt acgacagaac tcgaacttat ctactagatc aattgggagg CD 1101 ggctgctatt tcaatgccta aattatttac catgtttagc accctttcgt CD 1151 tggcttctct tgcattaccg ggaatgagtg gtttcgtgtc ggaattgcta CD 1201 gtttttttgg gagttgttac ttctaatcaa tattcttttg cctttaaggc CD 1251 gggaattacg gtgctagagg gaattggtac ggtattaact cccatctact CD 1301 tactatcaat gttacgccaa ctattttatg gttacaggtt ttttgacaaa CD 1351 tcaaatcctt actcaattga tcTtggtcca agagaattat ttattctaat CD 1401 ttgttttctc ctaccaatac taggtatcgg tttataccca aatttgattt CD 1451 tatctattgg gagtactgaa atcccttccc tcccacttac atga SQ SEQUENCE 498 AA; MISNVPWLTV IVSLPIFAGL MIPILPRNGN RVTRWYTLGI CILEFLLITY IFYCHFRIDY QSIQLLETFN WINNIHLHWS LGIDGLSLGL VILTGFATTL ATLSAWPITR NTRLFYFLML IMYGGQIGLF VSRDILLFFF MWEIELIPVY LLLCLWGGKR RLYSATKFVL YTAGGSIFLL VAALTMSFYG SEVPSFNIQD LIHKSYPLSL EVLIYVGFLV AYAVKLPIFP FHTWLPDTHG EAHYSTCMLL AGVLLKMGGY GLIRINLELL THAHFLLGSW MMLFGAIQII YASLISMSQR NFKRRIAYSS ISHMGFVTIG IGSFTETGIN GAILQMISHG LIGAALFFLA GTCYDRTRTY LLDQLGGAAI SMPKLFTMFS TLSLASLALP GMSGFVSELL VFLGVVTSNQ YSFAFKAGIT VLEGIGTVLT PIYLLSMLRQ LFYGYRFFDK SNPYSIDLGP RELFILICFL LPILGIGLYP NLILSIGSTE IPSLPLT* // ID AY178864_76 STANDARD; PRT; 101 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhE FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29443.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 113708 - 114010 FT DIRECTIONS : negative FT EDITING : 2 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atcaCgtttg aacaaggact aattctgagt gcttatcttt tatgtgtagg CD 51 ttttttcggt ctaattacga gtagaaatat ggttagggca ctgatgagtc CD 101 tagagctaat ctttaacgcg attactttaa atttcattac actttcaaat CD 151 ctttttgaca accgagagac tggggaaata tttacattat ttgtaatagc CD 201 cgttgcagct gctgaagctg ctaccgggtt agctattgcc ctttctatac CD 251 atcgaaacag gagatctact cgtatcgatc aatcgaattt gttaaaatgg CD 301 tga FT EDITED CDNA CD 1 atcaTgtttg aacaaggact aattctgagt gcttatcttt tatgtgtagg CD 51 ttttttcggt ctaattacga gtagaaatat ggttagggca ctgatgagtc CD 101 tagagctaat ctttaacgcg attactttaa atttcattac actttcaaat CD 151 ctttttgaca accgagagac tggggaaata tttacattat ttgtaatagc CD 201 cgttgcagct gctgaagctg ctaccgggtt agctattgcc ctttctatac CD 251 atcgaaacag gagatctact cgtatcgatc aatcgaattt gttaaaatgg CD 301 tga SQ SEQUENCE 101 AA; IMFEQGLILS AYLLCVGFFG LITSRNMVRA LMSLELIFNA ITLNFITLSN LFDNRETGEI FTLFVIAVAA AEAATGLAIA LSIHRNRRST RIDQSNLLKW * // ID AY178864_77 STANDARD; PRT; 198 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhG FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29444.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 114113 - 114706 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 14 P(cCg) -> L(cTg) FT EDITING : 28 S(tCa) -> L(tTa) FT EDITING : 39 P(cCg) -> L(cTg) FT EDITING : 41 S(tCg) -> L(tTg) FT EDITING : 53 S(tCg) -> L(tTg) FT EDITING : 64 P(cCa) -> L(cTa) FT EDITING : 79 T(aCg) -> M(aTg) FT EDITING : 109 T(aCa) -> I(aTa) FT EDITING : 120 F(tTt) -> S(tCt) FT CODON_START : 1 CL CDNALEN 594 NT; CD 1 aCgaatatct cagaattaat tcacgatttt gttttagcac Cggtagaatt CD 51 gggtatcctg ctgggaagtt taggcgcagt atCacttgtc aatacagtta CD 101 attccgcttt ttctcCgggg tCggttttca cttgtatatc tttattatac CD 151 tttgtttCga atgcagattt cgtagctgct gcgcagttgc Cagtttatgt CD 201 aggagccata aatgttttaa ccgtatttgc cgtcaCgatt actgatgaac CD 251 cggcaggttc tgagactact gcccgtggca taggctatat cattactgca CD 301 gggacttgca caatcctttt ttcaaCatta tcttttgtga ttcacaatac CD 351 taaatggtTt gacttaagtc tcattcctca atcgggaatt tctacatcag CD 401 gcacactcgg aagtaatgtc caacaacttg gatataaatt attgggagaa CD 451 ttcgtaatac cattcgaact tctctcgata cttctcctag ctgctttagt CD 501 gggagcaatt aatctagcac gcaatgaaga tgcatttatt gtcaataaga CD 551 aatcagctgc ttcagcaccc tacaaaaatt ctacattttt ctaa FT EDITED CDNA CD 1 aTgaatatct cagaattaat tcacgatttt gttttagcac Tggtagaatt CD 51 gggtatcctg ctgggaagtt taggcgcagt atTacttgtc aatacagtta CD 101 attccgcttt ttctcTgggg tTggttttca cttgtatatc tttattatac CD 151 tttgtttTga atgcagattt cgtagctgct gcgcagttgc Tagtttatgt CD 201 aggagccata aatgttttaa ccgtatttgc cgtcaTgatt actgatgaac CD 251 cggcaggttc tgagactact gcccgtggca taggctatat cattactgca CD 301 gggacttgca caatcctttt ttcaaTatta tcttttgtga ttcacaatac CD 351 taaatggtCt gacttaagtc tcattcctca atcgggaatt tctacatcag CD 401 gcacactcgg aagtaatgtc caacaacttg gatataaatt attgggagaa CD 451 ttcgtaatac cattcgaact tctctcgata cttctcctag ctgctttagt CD 501 gggagcaatt aatctagcac gcaatgaaga tgcatttatt gtcaataaga CD 551 aatcagctgc ttcagcaccc tacaaaaatt ctacattttt ctaa SQ SEQUENCE 198 AA; MNISELIHDF VLALVELGIL LGSLGAVLLV NTVNSAFSLG LVFTCISLLY FVLNADFVAA AQLLVYVGAI NVLTVFAVMI TDEPAGSETT ARGIGYIITA GTCTILFSIL SFVIHNTKWS DLSLIPQSGI STSGTLGSNV QQLGYKLLGE FVIPFELLSI LLLAALVGAI NLARNEDAFI VNKKSAASAP YKNSTFF* // ID AY178864_78 STANDARD; PRT; 168 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29445.2 FT PROTEIN_NAME : NADH dehydrogenase subunit I FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 114892 - 115395 FT DIRECTIONS : negative FT EDITING : 33 S(tCg) -> L(tTg) FT EDITING : 70 R(Cgc) -> C(Tgc) FT CODON_START : 1 CL CDNALEN 504 NT; CD 1 atgtttttgg caataattaa gtttcaaaat tatggtcaac aagttctcga CD 51 agccgcaaac tacattggtc aaggatttgc agttaccttg gatcattCga CD 101 atcgtttacc cataactgtt cagtatccat atgaaaaaaa attaccatcc CD 151 gaacgatttc gtggacgtat ccatttcgaa tttgataaat gtattgcctg CD 201 cgaagtaCgc gttcgcgtat gcccgatcaa tctcccagtt gtcgattgga CD 251 tattcctgaa agatgtgaaa aagaaaaaat tgaaaaacta tagcattgat CD 301 tttggagttt gcatattctg tgggaactgc gttgagtact gcccaacaaa CD 351 ttgtctgtcg atgaccgaag agtatgaact ttccagttac aatcgtcatg CD 401 aactcaattt tgatcaaacg gctttggggc gtttacctcc tcccgcctct CD 451 gaagatgttt caattcaatt agttttgaat tcaagaaatt cttttaggag CD 501 ataa FT EDITED CDNA CD 1 atgtttttgg caataattaa gtttcaaaat tatggtcaac aagttctcga CD 51 agccgcaaac tacattggtc aaggatttgc agttaccttg gatcattTga CD 101 atcgtttacc cataactgtt cagtatccat atgaaaaaaa attaccatcc CD 151 gaacgatttc gtggacgtat ccatttcgaa tttgataaat gtattgcctg CD 201 cgaagtaTgc gttcgcgtat gcccgatcaa tctcccagtt gtcgattgga CD 251 tattcctgaa agatgtgaaa aagaaaaaat tgaaaaacta tagcattgat CD 301 tttggagttt gcatattctg tgggaactgc gttgagtact gcccaacaaa CD 351 ttgtctgtcg atgaccgaag agtatgaact ttccagttac aatcgtcatg CD 401 aactcaattt tgatcaaacg gctttggggc gtttacctcc tcccgcctct CD 451 gaagatgttt caattcaatt agttttgaat tcaagaaatt cttttaggag CD 501 ataa SQ SEQUENCE 168 AA; MFLAIIKFQN YGQQVLEAAN YIGQGFAVTL DHLNRLPITV QYPYEKKLPS ERFRGRIHFE FDKCIACEVC VRVCPINLPV VDWIFLKDVK KKKLKNYSID FGVCIFCGNC VEYCPTNCLS MTEEYELSSY NRHELNFDQT ALGRLPPPAS EDVSIQLVLN SRNSFRR* // ID AY178864_79 STANDARD; PRT; 372 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29446.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 187/1 FT EDITING : 44 T(aCg) -> M(aTg) FT EDITING : 47 S(tCa) -> L(tTa) FT EDITING : 50 A(gCa) -> V(gTa) FT EDITING : 54 *(Tga) -> R(Cga) FT EDITING : 129 S(tCg) -> L(tTg) FT EDITING : 263 H(Cac) -> Y(Tac) FT EDITING : 267 S(tCa) -> L(tTa) FT EDITING : 271 P(cCa) -> L(cTa) FT EDITING : 356 S(tCg) -> L(tTg) FT EDITING : 359 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 1116 NT; CD 1 atgataaata gtaccgaatt ttgcagaaat aaactaattc atctttttga CD 51 cgagttagaa attacaatga atctttccaa atcaatttgg atttttgctt CD 101 ctactcttct tctagttttg ggagtcacga CgggagtttC agtaattgCa CD 151 tggctcgaaT gaaaagtatc cgcgggggtt cagcaacgaa ttggaccaga CD 201 atatgcaggt ccactaggga ttattcaatc cctagctgat ggaattaaac CD 251 ttcttttaaa agaagatatc attccagcta agggtaatgc ctggttattt CD 301 gccgccggac cggctgtcgt agtcacacca gtatttatta cttatttggt CD 351 aatacctttt ggccaacata tcatattatc cgattCggga ataggtgtct CD 401 ttttctggat tgctatctca agtattgtac ccctgggtct tcttgtggca CD 451 gggtacggtt caaataataa atattctttt ttaggcggtc tcagagcggc CD 501 ggctcaatct atcagttacg aaatacccct agctctatgt gtactgtcga CD 551 tatccctact atccggtagc ttgagtacag ttgatatagt tgagacacaa CD 601 tccaaatatg gtttttgggg gtggaatctg tggcgtcagc caataggatt CD 651 tatagccttt ttcatctctt cattggcaga atgtgagaga ttgccatttg CD 701 acttgccaga ggcggaggag gagttagtgg ctggttacca aactgaatat CD 751 tcaggaataa aatttggctt attttatgtt ggttctCacc taaatttgtC CD 801 agcttcctca cCatttgtag tagttctcta tttgggtgga tgggatttct CD 851 caattccttt tgtcgaaaat tttggacaaa ttgtttcaac ttcaagtgtc CD 901 attgacaagt ctctcgacac gttgaaaccg attgtagagg ttgccactac CD 951 attatccaaa tcctattttt acctattttt ctccatcttg acaagatgga CD 1001 ctctacctag agtcaggatg gatcaattac tagatctcgg atggaaattt CD 1051 ctactgccca ttgcttCggg aaattCgttg ctgacagctt cgtttcgaat CD 1101 attactcata agttga FT EDITED CDNA CD 1 atgataaata gtaccgaatt ttgcagaaat aaactaattc atctttttga CD 51 cgagttagaa attacaatga atctttccaa atcaatttgg atttttgctt CD 101 ctactcttct tctagttttg ggagtcacga TgggagtttT agtaattgTa CD 151 tggctcgaaC gaaaagtatc cgcgggggtt cagcaacgaa ttggaccaga CD 201 atatgcaggt ccactaggga ttattcaatc cctagctgat ggaattaaac CD 251 ttcttttaaa agaagatatc attccagcta agggtaatgc ctggttattt CD 301 gccgccggac cggctgtcgt agtcacacca gtatttatta cttatttggt CD 351 aatacctttt ggccaacata tcatattatc cgattTggga ataggtgtct CD 401 ttttctggat tgctatctca agtattgtac ccctgggtct tcttgtggca CD 451 gggtacggtt caaataataa atattctttt ttaggcggtc tcagagcggc CD 501 ggctcaatct atcagttacg aaatacccct agctctatgt gtactgtcga CD 551 tatccctact atccggtagc ttgagtacag ttgatatagt tgagacacaa CD 601 tccaaatatg gtttttgggg gtggaatctg tggcgtcagc caataggatt CD 651 tatagccttt ttcatctctt cattggcaga atgtgagaga ttgccatttg CD 701 acttgccaga ggcggaggag gagttagtgg ctggttacca aactgaatat CD 751 tcaggaataa aatttggctt attttatgtt ggttctTacc taaatttgtT CD 801 agcttcctca cTatttgtag tagttctcta tttgggtgga tgggatttct CD 851 caattccttt tgtcgaaaat tttggacaaa ttgtttcaac ttcaagtgtc CD 901 attgacaagt ctctcgacac gttgaaaccg attgtagagg ttgccactac CD 951 attatccaaa tcctattttt acctattttt ctccatcttg acaagatgga CD 1001 ctctacctag agtcaggatg gatcaattac tagatctcgg atggaaattt CD 1051 ctactgccca ttgcttTggg aaattTgttg ctgacagctt cgtttcgaat CD 1101 attactcata agttga SQ SEQUENCE 372 AA; MINSTEFCRN KLIHLFDELE ITMNLSKSIW IFASTLLLVL GVTMGVLVIV WLERKVSAGV QQRIGPEYAG PLGIIQSLAD GIKLLLKEDI IPAKGNAWLF AAGPAVVVTP VFITYLVIPF GQHIILSDLG IGVFFWIAIS SIVPLGLLVA GYGSNNKYSF LGGLRAAAQS ISYEIPLALC VLSISLLSGS LSTVDIVETQ SKYGFWGWNL WRQPIGFIAF FISSLAECER LPFDLPEAEE ELVAGYQTEY SGIKFGLFYV GSYLNLLASS LFVVVLYLGG WDFSIPFVEN FGQIVSTSSV IDKSLDTLKP IVEVATTLSK SYFYLFFSIL TRWTLPRVRM DQLLDLGWKF LLPIALGNLL LTASFRILLI S* // ID AY178864_80 STANDARD; PRT; 395 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ndhH FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29447.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 117499 - 118683 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 32 S(tCg) -> L(tTg) FT EDITING : 106 P(cCt) -> L(cTt) FT EDITING : 361 T(aCa) -> I(aTa) FT EDITING : 386 D(gaC) -> D(gaT) FT CODON_START : 1 CL CDNALEN 1185 NT; CD 1 aCgagtattc gtcttgaaga tattgatcca gttgtagtaa gcatgggtcc CD 51 tcatcatccc tcaatgcacg gtgttctccg gcttgttgtt gcttCgcagg CD 101 gtgaaaatgt tgttgattgt gaactaatat tgggatatct gcatcgagga CD 151 atggaaaaaa ttgccgaaaa tcgaacaact tcgcaatatc ttccctatgt CD 201 gacgagatgg gattatttag ctactatgtt tactgaagca gttacggtca CD 251 atgcaccgga aaaattggca aatattcaga tacccgaaag agctagttac CD 301 atacgcgtaa tcatgcCtga attaagtaga atagcatctc acctgttatg CD 351 gctcgggcca ttcctagcgg atatcggtgc acaaaccccc ttcttttata CD 401 tatttcggga aagggagatg atttatgact tgttcgaggc ggctacgggt CD 451 atgagaatga tgcataacta ctttcgaatt gggggagttg ccgcggattt CD 501 gccatacgga tggatcgata aatgcttgga tttttgccaa tattgcctgc CD 551 caaaaatcta tgagtatgag cgattagtta cgaaaaatcc tattttctta CD 601 aaacgagtgc agggagtagg tttcataaac agacaggaag ccatcaattg CD 651 gggattatct ggaccttcgt tacgagcttc aggggttcaa tgggatctcc CD 701 gcaaaattga tcattatgag tgttatgata agctggattg gcagattcag CD 751 tggcaggggg aaggagattc tttggctcga tatttagtac gaatcgacga CD 801 aatgaaagaa tcaataaata ttcttcgaca agctttaaaa cttctcccgg CD 851 gaggtccata tgaaaatcta gagggtcggc gtcttgtgca aaagaaagac CD 901 aaaatagatt ggaacggttt caactaccag tttgtcggaa agaaatcttc CD 951 tcctactctt aaattgccta aacaggaaca ttatgtaaga gtagaagctc CD 1001 ctaagggaga attgggaatt tttttaattg gagatgatag tgtctttcct CD 1051 tggagattga aaattcgtcc acctggtttt aCaaatttgc agattgtccc CD 1101 tcaattgatt aggggaatga aactcgcgga tattgtgaca atattaggta CD 1151 gtatagaCat catcatggga gaggttgatc gttag FT EDITED CDNA CD 1 aTgagtattc gtcttgaaga tattgatcca gttgtagtaa gcatgggtcc CD 51 tcatcatccc tcaatgcacg gtgttctccg gcttgttgtt gcttTgcagg CD 101 gtgaaaatgt tgttgattgt gaactaatat tgggatatct gcatcgagga CD 151 atggaaaaaa ttgccgaaaa tcgaacaact tcgcaatatc ttccctatgt CD 201 gacgagatgg gattatttag ctactatgtt tactgaagca gttacggtca CD 251 atgcaccgga aaaattggca aatattcaga tacccgaaag agctagttac CD 301 atacgcgtaa tcatgcTtga attaagtaga atagcatctc acctgttatg CD 351 gctcgggcca ttcctagcgg atatcggtgc acaaaccccc ttcttttata CD 401 tatttcggga aagggagatg atttatgact tgttcgaggc ggctacgggt CD 451 atgagaatga tgcataacta ctttcgaatt gggggagttg ccgcggattt CD 501 gccatacgga tggatcgata aatgcttgga tttttgccaa tattgcctgc CD 551 caaaaatcta tgagtatgag cgattagtta cgaaaaatcc tattttctta CD 601 aaacgagtgc agggagtagg tttcataaac agacaggaag ccatcaattg CD 651 gggattatct ggaccttcgt tacgagcttc aggggttcaa tgggatctcc CD 701 gcaaaattga tcattatgag tgttatgata agctggattg gcagattcag CD 751 tggcaggggg aaggagattc tttggctcga tatttagtac gaatcgacga CD 801 aatgaaagaa tcaataaata ttcttcgaca agctttaaaa cttctcccgg CD 851 gaggtccata tgaaaatcta gagggtcggc gtcttgtgca aaagaaagac CD 901 aaaatagatt ggaacggttt caactaccag tttgtcggaa agaaatcttc CD 951 tcctactctt aaattgccta aacaggaaca ttatgtaaga gtagaagctc CD 1001 ctaagggaga attgggaatt tttttaattg gagatgatag tgtctttcct CD 1051 tggagattga aaattcgtcc acctggtttt aTaaatttgc agattgtccc CD 1101 tcaattgatt aggggaatga aactcgcgga tattgtgaca atattaggta CD 1151 gtatagaTat catcatggga gaggttgatc gttag SQ SEQUENCE 395 AA; MSIRLEDIDP VVVSMGPHHP SMHGVLRLVV ALQGENVVDC ELILGYLHRG MEKIAENRTT SQYLPYVTRW DYLATMFTEA VTVNAPEKLA NIQIPERASY IRVIMLELSR IASHLLWLGP FLADIGAQTP FFYIFREREM IYDLFEAATG MRMMHNYFRI GGVAADLPYG WIDKCLDFCQ YCLPKIYEYE RLVTKNPIFL KRVQGVGFIN RQEAINWGLS GPSLRASGVQ WDLRKIDHYE CYDKLDWQIQ WQGEGDSLAR YLVRIDEMKE SINILRQALK LLPGGPYENL EGRRLVQKKD KIDWNGFNYQ FVGKKSSPTL KLPKQEHYVR VEAPKGELGI FLIGDDSVFP WRLKIRPPGF INLQIVPQLI RGMKLADIVT ILGSIDIIMG EVDR* // ID AY178864_82 STANDARD; PRT; 1692 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ycf1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29449.2 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 119372 - 124447 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 1155 C(tgC) -> C(tgT) FT CODON_START : 1 CL CDNALEN 5076 NT; CD 1 aCgaatacaa agatattgtt gtcactgccc tggccaaaac tgatggatcc CD 51 ctatatgcta cttggtttct actatgggtt acttacaaca ttacccgtgg CD 101 gaccttcgca aatcctatgt gtgagatctt ttcttttggg tgggaatcta CD 151 agtgggctaa tttctatcag tgggtcggta ttggcacaac taataactgc CD 201 atcatcaatc tactgctcgc caatttatct attactgcta aggccacatt CD 251 tactaactat tgtggcaata ccgtatacac ttctcttttg tctggtaatc CD 301 aaggattttc caaattatca gattttgcgt cccgtgacat cattacgtga CD 351 ctcacgagta gctagattat ttttgataag tttctttttt caaatattga CD 401 acccaataat gttaccaaat agtgtgttaa caagactgat ttatctatac CD 451 ttcttcaggt atagcaccaa tacagttttt atggtatcta cttttatggg CD 501 ttggttaact ggtcaggcag cattcaattt tttttctaga ctacttttaa CD 551 gtcgggtgaa aggggattcc ccgatattat atctagtggc gaaacgtttt CD 601 atatatgcaa cttttagtat tgtttccatc tcatatgctg tggcatattt CD 651 gggtagagct ccggtctctt tttggaccaa aaagttcatg aatgaatctc CD 701 atgatagaga aatgaatctt tgggaaattg ctgaatattc ggatctattg CD 751 tggtggtttt ttaaaccgtg gcccacttct ttttttgatc cctctagggc CD 801 aaatcggagt aatcgatttg tcaaaaatcg tcgattccac atgaataata CD 851 ctttttataa ggggagaaca tccacatact tttttgaaaa atgtttaact CD 901 gatggtaaag agagattatc ttttctagca ttgcccagtt tgtcaatttt CD 951 tgggaaagaa atgtatcaat cgatggcaaa gtcccgtaga tcttttggaa CD 1001 tccgtttatc atatcaaaat tgggtttcaa aaaaattagc gaaaacaaaa CD 1051 ttctttgaga aagaattaac ggatcaaatc aagttgttag acactggttc CD 1101 ttcattctca aagacgatga gtagaaaaac aagattgatg ggcggtaaaa CD 1151 ggaggagaat accccgcacc tatgacccct ttgtcaataa cttccgcata CD 1201 agaattccag tttcacagac atttttgtta gaagatgact tgggtttgag CD 1251 tctatgggaa tgggataaat tggcgacgga aagaaaaaat agaaaggcaa CD 1301 aaaaaactgt caggataaat gctatcaagg ataagatttt cacaaaagat CD 1351 cggagatgga aacatggata tggaaatccg ctaccgtggg aacctttgcc CD 1401 gtcgagaagt aaacgcatgt tctattttat atttgaaaat cgagctttat CD 1451 acgactacga tctacaaaat atcttgaaaa agataaaatc ttcgcccaca CD 1501 ctcgatgtta cttggaaaga aataatggat ttagattatg aagaccatat CD 1551 cttatttttg acctacttag aggtgggatg ctgtcaccga tttggttgga CD 1601 tatctccact caaagccttt ttgagaaaaa gttctaagag tttgtcaaat CD 1651 gtagaacgga gaatacgcag actaaataaa attgggaatt tgagtatgga CD 1701 tctggctcga tatactatcc tgtattttga aaataatttt gatataccgg CD 1751 gaggagacgg cgattttcgc tacagaaaat tgcgtaatgt gggtatcact CD 1801 ttcgcaaaag gaaagcccag atcagaaaga ttaatgaagc gatatgcaaa CD 1851 agtatctgat ttccgtagaa aatttctgaa gggctctatg cgttctagga CD 1901 ggcgaaagac cttgctctgg aaagcacttc aagaaaaaat acgttcgtct CD 1951 tttttcctca gatcagcaga aaggacaatc ttgtttcaat cacttattga CD 2001 gcgactgaca acttcaagcc gtgaagaaaa atttagtgag ttggaaaaag CD 2051 acacggatta cgaatttcag aaacaactac tagatatctc tttatcagcg CD 2101 aaaaggagtt taatcggtga atcgaagctt actcgttcag ctatagcagc CD 2151 tagatcagac ataggtccta tccataatgg aaggggatat atgctagttt CD 2201 ttcaatccag atttcgaaag tttattaaac taccagtact tatagtcttg CD 2251 aaaaatatcg gacgtatttt actccgtcaa aattccgaat ggaataagga CD 2301 ctggacggga tggaagaaag aaattcatat caattgtacg tttgatggcg CD 2351 aagacttttc acaagatgag ttacctccac gatggttaag agaaggtatt CD 2401 cagataaaaa ttgtgtatcc gtttcaactg aagccttggc acacagatgg CD 2451 gaatgaaaaa caacatactc ttcaaagaaa acacaaagaa attggatcta CD 2501 aaagccggga attgaaaagc aaaaggaaat tgaagcaaaa gaagcacaaa CD 2551 tttacttatt taactgtttt agggtatcag acggatatac cttttggaac CD 2601 tattcaaaag aaaacttctt tttggaaacc tgttcggaga aagttaattc CD 2651 ggatttgtaa aagaagcttg cctcgtcaaa ttaaacaagc ctatcaattt CD 2701 attcactcta ggttcgagaa agtatcaaaa ttgaattcaa ctccatcgaa CD 2751 gaaattgaat cttatttcca atctaagaca aggtggaaaa ttactaagtg CD 2801 actatagtct ggatgagaaa agttggatga aaacctcatc taccaattac CD 2851 gtaaatgaaa agacaaaacc taactgtaat gtaatttcaa acagtgagag CD 2901 atttattgct attggtgggg aaatgagtcc ggctaatgtt actcgtaaac CD 2951 aacttgttac tcgggaccag gtagaaagag aatttttaat gagtatcgtt CD 3001 gcagttgact ccaaaaacct tttggacgaa aaaatagatg acccatattc CD 3051 caaaataact tcgaaggatt tggaaacagg cgatactaca tcaggtgaca CD 3101 taaatcttgt gaattccacc aaatttgaac ggaagcaatt ggtcgattcc CD 3151 gaggaagcag gattaagttt atatttactt gtcagagaat taattgaaac CD 3201 atttgtttca gtactaataa acttgccttt cacaattaac aggatttttg CD 3251 ttcattactt cactgaattc ctcgcgttgt atacaaaatt ggcagggata CD 3301 ttggataaca ttaatgaggg aagcaattta tcaacaagaa gtaaatcgtt CD 3351 gcaatttgac ttgccatctc aaacctgtat ttatattgat atgtggaaca CD 3401 tcggtatgag gggcagctta aacctggatc tgttagttaa tgataaaaga CD 3451 agtagcagta attgCggagt aaaaaataga cagagtggca tctatgttga CD 3501 aaccgacggt gtatcaaacc tatatcaacc caaaatgtac gagaaacaaa CD 3551 ctcccgtcca ttacaattta atcgcgacaa aatttctgag tcctgaaata CD 3601 agaaataatc atgtaaatga tttaacaatg tgttttgata cggagactgg CD 3651 caaaactgat gaagagtttt ttgatgaaaa ggttgcgagg tctatagaga CD 3701 attggggatt tttgaataaa tcttgcaaat tggatgaaat taattggaat CD 3751 gaatggttat attctctctc cagatataac ttaccattaa cagcctggcg CD 3801 caatatagca cctcggaagt ggaaagtttg cttgagtgaa cttagtagta CD 3851 ttgagacaaa tacgataact gaattgaaag atcaggtatc tcaaaacaag CD 3901 ctacacagtt attattccat atacacaaaa aaatctttcc tcaggaataa CD 3951 aattagtaat tttagtaaac tgcgtaaaca tagaaacctg ctacaaaacc CD 4001 taactgattc cgtacaaaat ggcgatgtgg aaaatttatc tgtgcaacga CD 4051 gatattatgg agcaaaggtt tcattgcaag agttgcattc aaaaaagtag CD 4101 tagaggagga agaaacagaa ttagcaaatt tgttcacttt ctgagttcta CD 4151 atgtggagag caaaaataat ttgaatttgc aaattgattt gctatcgtgg CD 4201 ttagatccag atattgcaaa aacaaaaata tttttaaaaa aaaagaaaaa CD 4251 ggcaaagcag ttaaaaaatc ctctattgag aaatcactac cgatacagat CD 4301 atgtattaga catatccggc agattccaaa aggtattgaa tcagttgaat CD 4351 gatctcacgt tagatgaaag agaagatgcg gactacattt ttcgatggaa CD 4401 atttaaattt gaaacagaat tggaaaaatt tagaaactta atttctctca CD 4451 cgagaatgct aggagatgac caagatttga ttacactttg tacaaatatt CD 4501 gaagtaaatt cagatttgct aaatttgcaa tttaatgcaa aaactaaacg CD 4551 tgatatgttt cataacttat ctgttgtttc agcccatcgt ttgcggctag CD 4601 tatttgacga tcaagatttg ttgtataaaa taatcaaccc tttgctaaaa CD 4651 ttcaaaggga gattaagagg tatatttagg agacgtttat acagaaatgt CD 4701 atataacggt agttatattt ccaatttgtc acatatatta actgaacgaa CD 4751 attgtaaaca gtcttgcctc tataacatcg atgacctttt atctccgcga CD 4801 cgtaggcggg aatttcgatt tctctattgt ctattgagcc caaaaataga CD 4851 atattcccaa tatatatcaa gaattaaaaa aatagacaat gctgagaaaa CD 4901 aacaaaccct ttaccatctc ccaagaccga tcaggattca aaagattaaa CD 4951 cgttttttat ggcccagtca ccgattagaa gaagcggcct gtacaggcag CD 5001 atcctgcgtt ggcgttatga ctggaagtcg atttgtaacg cttagaatcc CD 5051 gaatgtatcc tattcctcta aattaa FT EDITED CDNA CD 1 aTgaatacaa agatattgtt gtcactgccc tggccaaaac tgatggatcc CD 51 ctatatgcta cttggtttct actatgggtt acttacaaca ttacccgtgg CD 101 gaccttcgca aatcctatgt gtgagatctt ttcttttggg tgggaatcta CD 151 agtgggctaa tttctatcag tgggtcggta ttggcacaac taataactgc CD 201 atcatcaatc tactgctcgc caatttatct attactgcta aggccacatt CD 251 tactaactat tgtggcaata ccgtatacac ttctcttttg tctggtaatc CD 301 aaggattttc caaattatca gattttgcgt cccgtgacat cattacgtga CD 351 ctcacgagta gctagattat ttttgataag tttctttttt caaatattga CD 401 acccaataat gttaccaaat agtgtgttaa caagactgat ttatctatac CD 451 ttcttcaggt atagcaccaa tacagttttt atggtatcta cttttatggg CD 501 ttggttaact ggtcaggcag cattcaattt tttttctaga ctacttttaa CD 551 gtcgggtgaa aggggattcc ccgatattat atctagtggc gaaacgtttt CD 601 atatatgcaa cttttagtat tgtttccatc tcatatgctg tggcatattt CD 651 gggtagagct ccggtctctt tttggaccaa aaagttcatg aatgaatctc CD 701 atgatagaga aatgaatctt tgggaaattg ctgaatattc ggatctattg CD 751 tggtggtttt ttaaaccgtg gcccacttct ttttttgatc cctctagggc CD 801 aaatcggagt aatcgatttg tcaaaaatcg tcgattccac atgaataata CD 851 ctttttataa ggggagaaca tccacatact tttttgaaaa atgtttaact CD 901 gatggtaaag agagattatc ttttctagca ttgcccagtt tgtcaatttt CD 951 tgggaaagaa atgtatcaat cgatggcaaa gtcccgtaga tcttttggaa CD 1001 tccgtttatc atatcaaaat tgggtttcaa aaaaattagc gaaaacaaaa CD 1051 ttctttgaga aagaattaac ggatcaaatc aagttgttag acactggttc CD 1101 ttcattctca aagacgatga gtagaaaaac aagattgatg ggcggtaaaa CD 1151 ggaggagaat accccgcacc tatgacccct ttgtcaataa cttccgcata CD 1201 agaattccag tttcacagac atttttgtta gaagatgact tgggtttgag CD 1251 tctatgggaa tgggataaat tggcgacgga aagaaaaaat agaaaggcaa CD 1301 aaaaaactgt caggataaat gctatcaagg ataagatttt cacaaaagat CD 1351 cggagatgga aacatggata tggaaatccg ctaccgtggg aacctttgcc CD 1401 gtcgagaagt aaacgcatgt tctattttat atttgaaaat cgagctttat CD 1451 acgactacga tctacaaaat atcttgaaaa agataaaatc ttcgcccaca CD 1501 ctcgatgtta cttggaaaga aataatggat ttagattatg aagaccatat CD 1551 cttatttttg acctacttag aggtgggatg ctgtcaccga tttggttgga CD 1601 tatctccact caaagccttt ttgagaaaaa gttctaagag tttgtcaaat CD 1651 gtagaacgga gaatacgcag actaaataaa attgggaatt tgagtatgga CD 1701 tctggctcga tatactatcc tgtattttga aaataatttt gatataccgg CD 1751 gaggagacgg cgattttcgc tacagaaaat tgcgtaatgt gggtatcact CD 1801 ttcgcaaaag gaaagcccag atcagaaaga ttaatgaagc gatatgcaaa CD 1851 agtatctgat ttccgtagaa aatttctgaa gggctctatg cgttctagga CD 1901 ggcgaaagac cttgctctgg aaagcacttc aagaaaaaat acgttcgtct CD 1951 tttttcctca gatcagcaga aaggacaatc ttgtttcaat cacttattga CD 2001 gcgactgaca acttcaagcc gtgaagaaaa atttagtgag ttggaaaaag CD 2051 acacggatta cgaatttcag aaacaactac tagatatctc tttatcagcg CD 2101 aaaaggagtt taatcggtga atcgaagctt actcgttcag ctatagcagc CD 2151 tagatcagac ataggtccta tccataatgg aaggggatat atgctagttt CD 2201 ttcaatccag atttcgaaag tttattaaac taccagtact tatagtcttg CD 2251 aaaaatatcg gacgtatttt actccgtcaa aattccgaat ggaataagga CD 2301 ctggacggga tggaagaaag aaattcatat caattgtacg tttgatggcg CD 2351 aagacttttc acaagatgag ttacctccac gatggttaag agaaggtatt CD 2401 cagataaaaa ttgtgtatcc gtttcaactg aagccttggc acacagatgg CD 2451 gaatgaaaaa caacatactc ttcaaagaaa acacaaagaa attggatcta CD 2501 aaagccggga attgaaaagc aaaaggaaat tgaagcaaaa gaagcacaaa CD 2551 tttacttatt taactgtttt agggtatcag acggatatac cttttggaac CD 2601 tattcaaaag aaaacttctt tttggaaacc tgttcggaga aagttaattc CD 2651 ggatttgtaa aagaagcttg cctcgtcaaa ttaaacaagc ctatcaattt CD 2701 attcactcta ggttcgagaa agtatcaaaa ttgaattcaa ctccatcgaa CD 2751 gaaattgaat cttatttcca atctaagaca aggtggaaaa ttactaagtg CD 2801 actatagtct ggatgagaaa agttggatga aaacctcatc taccaattac CD 2851 gtaaatgaaa agacaaaacc taactgtaat gtaatttcaa acagtgagag CD 2901 atttattgct attggtgggg aaatgagtcc ggctaatgtt actcgtaaac CD 2951 aacttgttac tcgggaccag gtagaaagag aatttttaat gagtatcgtt CD 3001 gcagttgact ccaaaaacct tttggacgaa aaaatagatg acccatattc CD 3051 caaaataact tcgaaggatt tggaaacagg cgatactaca tcaggtgaca CD 3101 taaatcttgt gaattccacc aaatttgaac ggaagcaatt ggtcgattcc CD 3151 gaggaagcag gattaagttt atatttactt gtcagagaat taattgaaac CD 3201 atttgtttca gtactaataa acttgccttt cacaattaac aggatttttg CD 3251 ttcattactt cactgaattc ctcgcgttgt atacaaaatt ggcagggata CD 3301 ttggataaca ttaatgaggg aagcaattta tcaacaagaa gtaaatcgtt CD 3351 gcaatttgac ttgccatctc aaacctgtat ttatattgat atgtggaaca CD 3401 tcggtatgag gggcagctta aacctggatc tgttagttaa tgataaaaga CD 3451 agtagcagta attgTggagt aaaaaataga cagagtggca tctatgttga CD 3501 aaccgacggt gtatcaaacc tatatcaacc caaaatgtac gagaaacaaa CD 3551 ctcccgtcca ttacaattta atcgcgacaa aatttctgag tcctgaaata CD 3601 agaaataatc atgtaaatga tttaacaatg tgttttgata cggagactgg CD 3651 caaaactgat gaagagtttt ttgatgaaaa ggttgcgagg tctatagaga CD 3701 attggggatt tttgaataaa tcttgcaaat tggatgaaat taattggaat CD 3751 gaatggttat attctctctc cagatataac ttaccattaa cagcctggcg CD 3801 caatatagca cctcggaagt ggaaagtttg cttgagtgaa cttagtagta CD 3851 ttgagacaaa tacgataact gaattgaaag atcaggtatc tcaaaacaag CD 3901 ctacacagtt attattccat atacacaaaa aaatctttcc tcaggaataa CD 3951 aattagtaat tttagtaaac tgcgtaaaca tagaaacctg ctacaaaacc CD 4001 taactgattc cgtacaaaat ggcgatgtgg aaaatttatc tgtgcaacga CD 4051 gatattatgg agcaaaggtt tcattgcaag agttgcattc aaaaaagtag CD 4101 tagaggagga agaaacagaa ttagcaaatt tgttcacttt ctgagttcta CD 4151 atgtggagag caaaaataat ttgaatttgc aaattgattt gctatcgtgg CD 4201 ttagatccag atattgcaaa aacaaaaata tttttaaaaa aaaagaaaaa CD 4251 ggcaaagcag ttaaaaaatc ctctattgag aaatcactac cgatacagat CD 4301 atgtattaga catatccggc agattccaaa aggtattgaa tcagttgaat CD 4351 gatctcacgt tagatgaaag agaagatgcg gactacattt ttcgatggaa CD 4401 atttaaattt gaaacagaat tggaaaaatt tagaaactta atttctctca CD 4451 cgagaatgct aggagatgac caagatttga ttacactttg tacaaatatt CD 4501 gaagtaaatt cagatttgct aaatttgcaa tttaatgcaa aaactaaacg CD 4551 tgatatgttt cataacttat ctgttgtttc agcccatcgt ttgcggctag CD 4601 tatttgacga tcaagatttg ttgtataaaa taatcaaccc tttgctaaaa CD 4651 ttcaaaggga gattaagagg tatatttagg agacgtttat acagaaatgt CD 4701 atataacggt agttatattt ccaatttgtc acatatatta actgaacgaa CD 4751 attgtaaaca gtcttgcctc tataacatcg atgacctttt atctccgcga CD 4801 cgtaggcggg aatttcgatt tctctattgt ctattgagcc caaaaataga CD 4851 atattcccaa tatatatcaa gaattaaaaa aatagacaat gctgagaaaa CD 4901 aacaaaccct ttaccatctc ccaagaccga tcaggattca aaagattaaa CD 4951 cgttttttat ggcccagtca ccgattagaa gaagcggcct gtacaggcag CD 5001 atcctgcgtt ggcgttatga ctggaagtcg atttgtaacg cttagaatcc CD 5051 gaatgtatcc tattcctcta aattaa SQ SEQUENCE 1692 AA; MNTKILLSLP WPKLMDPYML LGFYYGLLTT LPVGPSQILC VRSFLLGGNL SGLISISGSV LAQLITASSI YCSPIYLLLL RPHLLTIVAI PYTLLFCLVI KDFPNYQILR PVTSLRDSRV ARLFLISFFF QILNPIMLPN SVLTRLIYLY FFRYSTNTVF MVSTFMGWLT GQAAFNFFSR LLLSRVKGDS PILYLVAKRF IYATFSIVSI SYAVAYLGRA PVSFWTKKFM NESHDREMNL WEIAEYSDLL WWFFKPWPTS FFDPSRANRS NRFVKNRRFH MNNTFYKGRT STYFFEKCLT DGKERLSFLA LPSLSIFGKE MYQSMAKSRR SFGIRLSYQN WVSKKLAKTK FFEKELTDQI KLLDTGSSFS KTMSRKTRLM GGKRRRIPRT YDPFVNNFRI RIPVSQTFLL EDDLGLSLWE WDKLATERKN RKAKKTVRIN AIKDKIFTKD RRWKHGYGNP LPWEPLPSRS KRMFYFIFEN RALYDYDLQN ILKKIKSSPT LDVTWKEIMD LDYEDHILFL TYLEVGCCHR FGWISPLKAF LRKSSKSLSN VERRIRRLNK IGNLSMDLAR YTILYFENNF DIPGGDGDFR YRKLRNVGIT FAKGKPRSER LMKRYAKVSD FRRKFLKGSM RSRRRKTLLW KALQEKIRSS FFLRSAERTI LFQSLIERLT TSSREEKFSE LEKDTDYEFQ KQLLDISLSA KRSLIGESKL TRSAIAARSD IGPIHNGRGY MLVFQSRFRK FIKLPVLIVL KNIGRILLRQ NSEWNKDWTG WKKEIHINCT FDGEDFSQDE LPPRWLREGI QIKIVYPFQL KPWHTDGNEK QHTLQRKHKE IGSKSRELKS KRKLKQKKHK FTYLTVLGYQ TDIPFGTIQK KTSFWKPVRR KLIRICKRSL PRQIKQAYQF IHSRFEKVSK LNSTPSKKLN LISNLRQGGK LLSDYSLDEK SWMKTSSTNY VNEKTKPNCN VISNSERFIA IGGEMSPANV TRKQLVTRDQ VEREFLMSIV AVDSKNLLDE KIDDPYSKIT SKDLETGDTT SGDINLVNST KFERKQLVDS EEAGLSLYLL VRELIETFVS VLINLPFTIN RIFVHYFTEF LALYTKLAGI LDNINEGSNL STRSKSLQFD LPSQTCIYID MWNIGMRGSL NLDLLVNDKR SSSNCGVKNR QSGIYVETDG VSNLYQPKMY EKQTPVHYNL IATKFLSPEI RNNHVNDLTM CFDTETGKTD EEFFDEKVAR SIENWGFLNK SCKLDEINWN EWLYSLSRYN LPLTAWRNIA PRKWKVCLSE LSSIETNTIT ELKDQVSQNK LHSYYSIYTK KSFLRNKISN FSKLRKHRNL LQNLTDSVQN GDVENLSVQR DIMEQRFHCK SCIQKSSRGG RNRISKFVHF LSSNVESKNN LNLQIDLLSW LDPDIAKTKI FLKKKKKAKQ LKNPLLRNHY RYRYVLDISG RFQKVLNQLN DLTLDEREDA DYIFRWKFKF ETELEKFRNL ISLTRMLGDD QDLITLCTNI EVNSDLLNLQ FNAKTKRDMF HNLSVVSAHR LRLVFDDQDL LYKIINPLLK FKGRLRGIFR RRLYRNVYNG SYISNLSHIL TERNCKQSCL YNIDDLLSPR RRREFRFLYC LLSPKIEYSQ YISRIKKIDN AEKKQTLYHL PRPIRIQKIK RFLWPSHRLE EAACTGRSCV GVMTGSRFVT LRIRMYPIPL N* // ID AY178864_83 STANDARD; PRT; 461 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : chlN FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29450.2 FT PROTEIN_NAME : protochlorophyllide reductase subunit chlN FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 124805 - 126187 FT DIRECTIONS : negative FT EDITING : 45 R(Cgt) -> C(Tgt) FT EDITING : 148 A(gCg) -> V(gTg) FT EDITING : 320 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1383 NT; CD 1 atgaaaactc cggagactct tgctttcgaa tgtgaaaccg gcaattacca CD 51 tacgttctgc ccaattagtt gtgtagcttg gttgtaccaa aaaattgaag CD 101 atagtttttt cctggtagtg ggtacaaaaa ctCgtggtta ttttttgcaa CD 151 aatgctcttg gagtgatgat ttttgccgaa cctcgatatg caatggcaga CD 201 attggaagag ggcgatatct cagctcagtt aaatgatcag aaagagttgg CD 251 aaaagatttg cttacaaata agagacgata ggaatcccag tgttatcatt CD 301 tggattggca cttgtactac agagataata aaaatggatt tggaaggtat CD 351 agcgccaaaa ttggaaaaac aaattggaat acctataata gttgcacgag CD 401 caaatggatt ggattacgcc ttcactcagg gggaagatac cgCgttggct CD 451 gccatggcgc atcgctgtcc ggaatacaaa cattgcacaa cgaacttgaa CD 501 gaaccggact gatgaaatgg cgcgtattga taatcatact actaacaaat CD 551 ctccctttga agcgagtaaa ttgacaagat tcaatttagt gctttttggt CD 601 tctttatcct ccagtatagc ttcgcaactg aatttagaat tgaaacgcca CD 651 atcaatttct gtttcaggtt ggttaccttc gcagaaatac gaggaactcc CD 701 ccggcttagg agagggtatc tatgtttgcg gagtgaatcc ttttctgagt CD 751 cgtacagcaa caacattaat gcgtcgccgg aaatgtaagt tagttggagc CD 801 acctttccca attggtccgg atggcacacg cgcctggatc gaaaaaattt CD 851 gttcagtttt tgatattaag tcatacggtc tagaaaatag ggaaagtgaa CD 901 atatgggaaa atgtcaaaga ttatatccag gtaataaatg gtaaatccgt CD 951 attctttaCg ggagataatt tattggaaat ttctttggca agatttttaa CD 1001 ttcgatgcgg aatgattgtt tacgaagtag gaattcccta tatggataga CD 1051 cgataccaag ctgctgagct tttgttttta caacatactt gccggaagat CD 1101 gaaaacaccc ctaccccgga ttgttgaaaa acccgacaat tatggacaga CD 1151 tacaacgtat gcatgagctt aaaccacatt tggctattac gggaatggct CD 1201 catgctaatc ctttggaggc tagaaatata gataccaaat ggtcagttga CD 1251 attcacattt gcacaaattc acggattcag tagcgttcga gacatcctcg CD 1301 aactagttac tcgtccgctg cgacgtaggg gtgttataac cccaggtttt CD 1351 cgcagcttat caaaacaaac gacaggagat tga FT EDITED CDNA CD 1 atgaaaactc cggagactct tgctttcgaa tgtgaaaccg gcaattacca CD 51 tacgttctgc ccaattagtt gtgtagcttg gttgtaccaa aaaattgaag CD 101 atagtttttt cctggtagtg ggtacaaaaa ctTgtggtta ttttttgcaa CD 151 aatgctcttg gagtgatgat ttttgccgaa cctcgatatg caatggcaga CD 201 attggaagag ggcgatatct cagctcagtt aaatgatcag aaagagttgg CD 251 aaaagatttg cttacaaata agagacgata ggaatcccag tgttatcatt CD 301 tggattggca cttgtactac agagataata aaaatggatt tggaaggtat CD 351 agcgccaaaa ttggaaaaac aaattggaat acctataata gttgcacgag CD 401 caaatggatt ggattacgcc ttcactcagg gggaagatac cgTgttggct CD 451 gccatggcgc atcgctgtcc ggaatacaaa cattgcacaa cgaacttgaa CD 501 gaaccggact gatgaaatgg cgcgtattga taatcatact actaacaaat CD 551 ctccctttga agcgagtaaa ttgacaagat tcaatttagt gctttttggt CD 601 tctttatcct ccagtatagc ttcgcaactg aatttagaat tgaaacgcca CD 651 atcaatttct gtttcaggtt ggttaccttc gcagaaatac gaggaactcc CD 701 ccggcttagg agagggtatc tatgtttgcg gagtgaatcc ttttctgagt CD 751 cgtacagcaa caacattaat gcgtcgccgg aaatgtaagt tagttggagc CD 801 acctttccca attggtccgg atggcacacg cgcctggatc gaaaaaattt CD 851 gttcagtttt tgatattaag tcatacggtc tagaaaatag ggaaagtgaa CD 901 atatgggaaa atgtcaaaga ttatatccag gtaataaatg gtaaatccgt CD 951 attctttaTg ggagataatt tattggaaat ttctttggca agatttttaa CD 1001 ttcgatgcgg aatgattgtt tacgaagtag gaattcccta tatggataga CD 1051 cgataccaag ctgctgagct tttgttttta caacatactt gccggaagat CD 1101 gaaaacaccc ctaccccgga ttgttgaaaa acccgacaat tatggacaga CD 1151 tacaacgtat gcatgagctt aaaccacatt tggctattac gggaatggct CD 1201 catgctaatc ctttggaggc tagaaatata gataccaaat ggtcagttga CD 1251 attcacattt gcacaaattc acggattcag tagcgttcga gacatcctcg CD 1301 aactagttac tcgtccgctg cgacgtaggg gtgttataac cccaggtttt CD 1351 cgcagcttat caaaacaaac gacaggagat tga SQ SEQUENCE 461 AA; MKTPETLAFE CETGNYHTFC PISCVAWLYQ KIEDSFFLVV GTKTCGYFLQ NALGVMIFAE PRYAMAELEE GDISAQLNDQ KELEKICLQI RDDRNPSVII WIGTCTTEII KMDLEGIAPK LEKQIGIPII VARANGLDYA FTQGEDTVLA AMAHRCPEYK HCTTNLKNRT DEMARIDNHT TNKSPFEASK LTRFNLVLFG SLSSSIASQL NLELKRQSIS VSGWLPSQKY EELPGLGEGI YVCGVNPFLS RTATTLMRRR KCKLVGAPFP IGPDGTRAWI EKICSVFDIK SYGLENRESE IWENVKDYIQ VINGKSVFFM GDNLLEISLA RFLIRCGMIV YEVGIPYMDR RYQAAELLFL QHTCRKMKTP LPRIVEKPDN YGQIQRMHEL KPHLAITGMA HANPLEARNI DTKWSVEFTF AQIHGFSSVR DILELVTRPL RRRGVITPGF RSLSKQTTGD * // ID AY178864_84 STANDARD; PRT; 294 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : chlL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29451.2 FT PROTEIN_NAME : photochlorophyllide reductase subunit chlL FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 126266 - 127147 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 83 R(Cgt) -> C(Tgt) FT EDITING : 106 P(cCt) -> L(cTt) FT EDITING : 120 S(tCa) -> L(tTa) FT EDITING : 128 A(gCt) -> V(gTt) FT EDITING : 233 R(Cgt) -> C(Tgt) FT EDITING : 236 H(Cat) -> Y(Tat) FT EDITING : 242 *(Taa) -> Q(Caa) FT EDITING : 294 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 882 NT; CD 1 aCgaaagtag cagtttatgg aaaaggtgga attggaaaat caacaactag CD 51 ctgtaatata tcgatagctt tagccagaag aggaagaaaa gtcttacaaa CD 101 ttggatgtga cccaaaacat gatagtacat ttacactaac aggattttta CD 151 atacctacaa ttatagatac tttacaggtg aaagattacc actatgaaga CD 201 tgtatggccc gaagatgtga tttatagagg ttacggcggg gtagatCgtg CD 251 tagaagctgg aggaccccct gcaggagcag gatgcggcgg gtacgttgtg CD 301 ggagaaacgg taaaacCttt gaaagaatta aatgcttttt acgaatatga CD 351 catcatttCa ttcgatgttc tgggagatgt tgCttgcggg ggatttgccg CD 401 ctcccttaaa ttatgcggat tattgcatta ttataactga taatggcttc CD 451 gacgctctat ttgcggcaaa ccgtattgcc gcttcagtta gagaaaaatc CD 501 acatacccat cccttgcgac tagcgggtct agttggaaac cgaacatccg CD 551 gaagagatct tattgataaa tatgtagaag cttgccccat gcctgtacta CD 601 gaggtattgc ccttagtaga agatattcgc gtatcgagag tgaaaggaaa CD 651 aaccttgttt gaaatggctg aatatcaacc gaatttaaat tatgttCgtg CD 701 attttCattt gaatatagca gatTaaatct tatccgagcc agagggagtc CD 751 gtgccaaggg aaattccaga tagagaattg tttagcttgc tctctgattt CD 801 ttatttaaat tccaccttta caaatgaaag tgatggtgga tatgaccacc CD 851 aagatgttcc gcttgacttt acaattattC ga FT EDITED CDNA CD 1 aTgaaagtag cagtttatgg aaaaggtgga attggaaaat caacaactag CD 51 ctgtaatata tcgatagctt tagccagaag aggaagaaaa gtcttacaaa CD 101 ttggatgtga cccaaaacat gatagtacat ttacactaac aggattttta CD 151 atacctacaa ttatagatac tttacaggtg aaagattacc actatgaaga CD 201 tgtatggccc gaagatgtga tttatagagg ttacggcggg gtagatTgtg CD 251 tagaagctgg aggaccccct gcaggagcag gatgcggcgg gtacgttgtg CD 301 ggagaaacgg taaaacTttt gaaagaatta aatgcttttt acgaatatga CD 351 catcatttTa ttcgatgttc tgggagatgt tgTttgcggg ggatttgccg CD 401 ctcccttaaa ttatgcggat tattgcatta ttataactga taatggcttc CD 451 gacgctctat ttgcggcaaa ccgtattgcc gcttcagtta gagaaaaatc CD 501 acatacccat cccttgcgac tagcgggtct agttggaaac cgaacatccg CD 551 gaagagatct tattgataaa tatgtagaag cttgccccat gcctgtacta CD 601 gaggtattgc ccttagtaga agatattcgc gtatcgagag tgaaaggaaa CD 651 aaccttgttt gaaatggctg aatatcaacc gaatttaaat tatgttTgtg CD 701 attttTattt gaatatagca gatCaaatct tatccgagcc agagggagtc CD 751 gtgccaaggg aaattccaga tagagaattg tttagcttgc tctctgattt CD 801 ttatttaaat tccaccttta caaatgaaag tgatggtgga tatgaccacc CD 851 aagatgttcc gcttgacttt acaattattT ga SQ SEQUENCE 294 AA; MKVAVYGKGG IGKSTTSCNI SIALARRGRK VLQIGCDPKH DSTFTLTGFL IPTIIDTLQV KDYHYEDVWP EDVIYRGYGG VDCVEAGGPP AGAGCGGYVV GETVKLLKEL NAFYEYDIIL FDVLGDVVCG GFAAPLNYAD YCIIITDNGF DALFAANRIA ASVREKSHTH PLRLAGLVGN RTSGRDLIDK YVEACPMPVL EVLPLVEDIR VSRVKGKTLF EMAEYQPNLN YVCDFYLNIA DQILSEPEGV VPREIPDREL FSLLSDFYLN STFTNESDGG YDHQDVPLDF TII* // ID AY178864_85 STANDARD; PRT; 2105 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : ycf2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29454.2 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 128339 - 134653 FT DIRECTIONS : negative FT EDITING : 63 *(Tga) -> R(Cga) FT EDITING : 65 L(Cta) -> L(Tta) FT EDITING : 1199 S(tCc) -> F(tTc) FT EDITING : 1232 *(Taa) -> Q(Caa) FT EDITING : 1251 S(agT) -> S(agC) FT EDITING : 1523 S(tCa) -> L(tTa) FT EDITING : 1531 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 6315 NT; CD 1 atggtaaaaa aggtgataga aaaaggaaga ggagtaaggg gccgagatta CD 51 ttcatctaaa gtttgggact tcttagaaat cgatgcatta aactacttct CD 101 ccgaatcatt gaaaaaccac tatctcgaag aacttgtagt tagtccagct CD 151 tccactgctg aacctttcat cagattatct gacttgTgat ttCtaagttt CD 201 actgtttcta cgtaatctgc gtcattcaat aatgaggggt agtggcgtca CD 251 ccctggaaat gctgatgttg ctggcgatac caatttttat gcattgcctg CD 301 agttacaaaa attcgattga taggggtttt gtattagcaa aagtcattga CD 351 tggaggtgag gggataagaa agaaacagac ggaaaattat ggcaatttct CD 401 cctacgattg cttcctccaa ttcaagagat ttttatccgt cggaagagat CD 451 gggaagagag aaatactgga gccctactac ttaggtttga acaaagatat CD 501 ttcaatttct gcaagttctt caaaggagga aagagaaatc cgttatgatg CD 551 tcacgactcc cttgccttcc ggtaggtgga aggcacgcat aatgaggagg CD 601 gattccctac tatttggcgg ggatagattc aaggggaaaa ctgaagggat CD 651 tcaagtggtt cgtgggggta ggtatctgca agatttagtt aggtttttca CD 701 aattctataa aaacttggta gtttccaaaa acggaagtga ctgccaccaa CD 751 aacaattttg attcgttgct tctccgggaa atctgtgaca agcaagatct CD 801 gggtcggtta caagcaatac ggttgggaaa caattcatta agttccgtag CD 851 tattgtaccc ctttgaatct gaatccgcag attcagccga tccccggagg CD 901 gacggatcgg catttccctc tgagcaagaa gtcttttcca acttgtattc CD 951 gtttacgtct cgtgagaaaa caatattgtt tcgcaactct atatctggat CD 1001 tagattatgg agaagatgag ggaggctttc ccgttctaca tgcttattca CD 1051 caagttagaa atcaattaat aaaccgactc accaacttcc tttcgataat CD 1101 taggaaatca aaccttcctc ttggtgggaa aatagttatt gacgtcagta CD 1151 ataggatcaa atccgagaga gtcttttttc catcgggaat gaaaaaaaat CD 1201 atgccgttta ccaaaatatc tggcaagaaa cttaggttag caagtggcgg CD 1251 atacttcgac ttcgttgaga ttttcccaac ctattttaaa gcatccttag CD 1301 agatacctag ggaaacaact aatcaaaatg gaaatactaa ttttttagac CD 1351 gaattggaag gaggggggaa cctagattca atttattctc tagttagatt CD 1401 atatgggcga aatagaatca tacctctcta ctcaacatac atatttcttc CD 1451 tccacgatta tttttgtgcg ttatccactg aatatttctt ccgaatcaaa CD 1501 tattggttgg atggctggac gggtggcaga gtatacatca gtttcacggg CD 1551 aattgcaact gaagaaacag tattcaagtg gaaggatgac gtagagcgtc CD 1601 tatcgaacga atatgttacc tcccatattg gtcagtgtag gaatgttcaa CD 1651 tcaaatctgt atagacggct cgatgcaaca cggaatttgt atgtttcgcc CD 1701 tgttaagaaa ttcttgggag aagcaatgaa gtacaacttg gcagaattaa CD 1751 tctgccgtgt gtcactagtg ggaaacgagt tgctaaataa gactggtgtc CD 1801 agtctccgta gtaccaatag acataccaag aaatattttc accgatttct CD 1851 cgatgtgtta tttctttcca aaatgattgt tgctgaggct actcgccaga CD 1901 aaattctgat agataccgtt gattactgca tcgaaaaatt ggacgacata CD 1951 gattttgaaa aattgaacaa aatggatcgt attgagcttg attttttctc CD 2001 aagtttatcc gatggttaca ttgacgaaga gatacttctt ttcaaaacaa CD 2051 ttcttgaaga aagaaaaagt ttcttagtcg agtctagact gttaacaagt CD 2101 gaaaaatcgg taggctcctc gactgcgcta aaacctgcgt cgaatttcac CD 2151 ctctctcggg ttgtcttgca tcgaagctat ccgagcagga ttctcgggtg CD 2201 aggctctttc tattatgggg agacaaaatt ggaatctgtt tgtgtgtgat CD 2251 ttaagccgtg gggggaattc aattaggaat attggtgaga gtcttccaaa CD 2301 aaacatttcc gatcaaatgg atgaaataaa caactcacct atacggagcc CD 2351 gggctggaaa caactttatc cagagaatca aaaggggttt cttcgtcggg CD 2401 aactgtagca atagttatct cgacgtgtta gaaaactttt atttgagctc CD 2451 cgacgagaaa gccatctcct catctgatat cctttcactt attcacctcc CD 2501 aattgtcaga ttcgttatca tccaattttt cgaaacaaac ggcaggggag CD 2551 gtagctgatc acttactcac accaattcaa cttatttcgc ctaacctgca CD 2601 tgaatccgcg accatagtaa ctcatttgga tggacttccc aattctattt CD 2651 cggatctgaa tgggttactg gcaagtttga gctcatcccc ccgtgaagcg CD 2701 acagactcgt tcctattttc gtgtagtaat gatggagttt ctttggagga CD 2751 ggcgtcgaga aactccgact cgtggtcgga tcatcagcga acccaacctc CD 2801 gtcggaatct gctggtatta gatcgagtca attcggagaa gtttttcaaa CD 2851 gatggattag actcgagaaa tggttccccc acgagtcaag tctatcgaaa CD 2901 cgggttgtct attgagtatt tttgggaacc gaaaaaattg gatacacctt CD 2951 attggtcgct aagattctca ttattcaatg gcgtaacatc aagatttata CD 3001 gcgggatcaa ttggggagga tgttacccgc caagatgcgg ggttcgcaga CD 3051 ttcatctgcc cgggaagaag ctacttgccc gtcccatttc atcaatttca CD 3101 atgaattatc agaagatttg aacagatata agatctcttg gattttctgg CD 3151 agagacagta tcggcgaaaa ttggagctta ttgggagatt atatacccct CD 3201 gttttttacc cccacctggt ggagatactt ctgcgatcta attacaaaag CD 3251 catatccgga aatagtactt aagataagtt acgactcaaa tcatgatctt CD 3301 cgtagaattt ctgaaggaat tgctaggggt ttagtaggta gcgcgaaggg CD 3351 ctatttactc cgaagcctgc aaaggctagg attgatattc ggaaacaatt CD 3401 ctattaatac tatatcatcc gagacagatc ttctcattct cgaaaaaatc CD 3451 cctgataaag cggagatttt acatccgggg gaatggtcgg tatctcaatt CD 3501 ttccaatagg cctatctcct attgctgcat cctctcaata ttacttgttc CD 3551 tcctgtcatt gaaacatcct ttgtctgccg tttcgggttc caattCcttt CD 3601 catttgtgga aacgttttgc tactattgac tatttaacag acccaatgcg CD 3651 tggatcctat ttgagaaagg taatgtattc ccccccgaca agcTaaatgt CD 3701 taacaagaga tctactaatt cattctctca atagattctt gaattgtgta CD 3751 agTaatatac tttttttcct tttcgtgaaa aatgaaattg attcgtggat CD 3801 atttcgtaga gaaagctctg atattttaga tagtaataaa gaactactga CD 3851 ctcaacattt ggtaacgact aagattctct acaggtatgc atcgaaatca CD 3901 aaattcaatt atgatttatc gagcaacaag atttttcatg aaccttaccc CD 3951 gcaagataga tccaacgttt tggcatactt acttcaattc tggcaaaatg CD 4001 atctattggg tcacaagatt cgtaagttgg atcctgcgga gaagtgggct CD 4051 ttttccgccc ttgggagaga tattctattt tcggcaacaa caaggcgaag CD 4101 agacagtcta ctaaatatgc catgtcgtga catacctatt tcactccaat CD 4151 cgggattatt accatccaaa ggaattttgc tagtaggacc tgtagaaact CD 4201 ggcagatcct ctcttattag agatgtagca tccaactcct actttccagt CD 4251 ggtgaaacta ccactcaaaa aattcatata caaccgatct tttttcaata CD 4301 atgtacgtgg aaatttcatc tcgaaagaga gcgtacaccg attaaatatc CD 4351 gtctttgaaa tagcgaaaga aatgtctcct tgtacattat ggattcaaga CD 4401 tattcatgaa ttgaatattt gtcgttcgta taataagcta gaagctgatc CD 4451 ccaaatttct actttgccaa atattgaaga gtattggtca caagctcggc CD 4501 aactccgaca tccgcgagaa tgtcgttatt gccacgactc acgtacctgc CD 4551 gaggatagat ccagcttCag tagctccgaa tcggttaaac Taattaataa CD 4601 attttcggag gtccaatggg cgtcaacgtc agaaagaatt gtcaattcta CD 4651 ttacgtatca aaggtttcga ggtaggggct aatccgactc ttcttgagag CD 4701 tactgtgtct ggaactgcag gttatagtaa acgagattta cttcttctcg CD 4751 ctaatgaagc gttattgata ggtacttcca aagggagaaa gtttgtatgt CD 4801 agcaacacaa ttggattagc tttgcatagg caacattcga ctgttagtga CD 4851 tatgggcaat gagatggaat ctaattctga atgggaaatc tcttcctaca CD 4901 agatggcaga agtaaagaat agtttgacag atatttctct cacaactttt CD 4951 ccatttattg gtcgtgacga gttaaaaatg cgattttatt acttgtctaa CD 5001 ctggtatgtg gaaccttcaa caaccgaatc aacaattgat gaattcacta CD 5051 tgtttttgca tctcccagag ctaatagcca aattagtagc tcgcgattcg CD 5101 ttccaaatgg ataggggaaa agaagataat ttcattgtta tcgacaaact CD 5151 cgtagagaat gacttaaacc tagcttgtgg cgtcctagaa aacctctcga CD 5201 ataatttccc acgtccggaa atttgtaggg gagagagccg gcgcagtaat CD 5251 agttttcctc cccctcttcc tattggaaaa cccaagtatt gctcaggtgt CD 5301 aacctctcta agtcgctctt ccaaatctct gaaaagaggg agaattagta CD 5351 gtctaaccga tttcgagatg caacagtcac ccgaattaag aaactcagcg CD 5401 gcagagatat cgcgtgagat tacttggtcc cgcaaggctt ggcgtctccg CD 5451 tttcctgcga agcgggactt acgaattgat gggggtatta tccgaaccca CD 5501 accatttgta taacttaatt cttctttact acaatcagaa ttacataccc CD 5551 caacaagatt ttgaattcag taagattagg ggaaagagaa gtaagtggcg CD 5601 cgagaaaagc gggtatcttt tcagcttcga gaaatctgtc actaatggaa CD 5651 cagataattc cattaaaaga ttggaaaacc gattggataa tatgttgtta CD 5701 cgtgagcaat ttctcgaatt gggaatctct ggcgattcat ctaatgagta CD 5751 tgaaacacat tgtgatcgat tgaatgaaat gactcgactc ttcggggggc CD 5801 gcttcatctg ggaccccatg cttctgttcc agccagaccc taacattcct CD 5851 tccctgcgcc gcaacttgtt gtcaacgaaa gaactggcac ggaggcttca CD 5901 caccatttac ggtatgagaa ggcagcgcct tcagaagatg tcaaataata CD 5951 aaattaaaga ttttttcctc tatagcgaag agaatccaaa attgaaaccc CD 6001 gactcatctc tcaatcggcg gaataatctt cctctggaag aggaggagcg CD 6051 agattccgaa tacgtcaggg aaacctcttc cgtagatata catctgcaat CD 6101 atccgcagat atttactccc gttcgtttgg gttgctacgc ggtagcggag CD 6151 gatttcccgg aacgatttct tcggtttagg cttctggttc atagaaacaa CD 6201 atggctgaga cggaaccgtt ccccatttcg ggattttctt atttataata CD 6251 tgttgcttga aacttatgaa tatctatcca atccgtttcg gtttggtaaa CD 6301 gcatcactgg attga FT EDITED CDNA CD 1 atggtaaaaa aggtgataga aaaaggaaga ggagtaaggg gccgagatta CD 51 ttcatctaaa gtttgggact tcttagaaat cgatgcatta aactacttct CD 101 ccgaatcatt gaaaaaccac tatctcgaag aacttgtagt tagtccagct CD 151 tccactgctg aacctttcat cagattatct gacttgCgat ttTtaagttt CD 201 actgtttcta cgtaatctgc gtcattcaat aatgaggggt agtggcgtca CD 251 ccctggaaat gctgatgttg ctggcgatac caatttttat gcattgcctg CD 301 agttacaaaa attcgattga taggggtttt gtattagcaa aagtcattga CD 351 tggaggtgag gggataagaa agaaacagac ggaaaattat ggcaatttct CD 401 cctacgattg cttcctccaa ttcaagagat ttttatccgt cggaagagat CD 451 gggaagagag aaatactgga gccctactac ttaggtttga acaaagatat CD 501 ttcaatttct gcaagttctt caaaggagga aagagaaatc cgttatgatg CD 551 tcacgactcc cttgccttcc ggtaggtgga aggcacgcat aatgaggagg CD 601 gattccctac tatttggcgg ggatagattc aaggggaaaa ctgaagggat CD 651 tcaagtggtt cgtgggggta ggtatctgca agatttagtt aggtttttca CD 701 aattctataa aaacttggta gtttccaaaa acggaagtga ctgccaccaa CD 751 aacaattttg attcgttgct tctccgggaa atctgtgaca agcaagatct CD 801 gggtcggtta caagcaatac ggttgggaaa caattcatta agttccgtag CD 851 tattgtaccc ctttgaatct gaatccgcag attcagccga tccccggagg CD 901 gacggatcgg catttccctc tgagcaagaa gtcttttcca acttgtattc CD 951 gtttacgtct cgtgagaaaa caatattgtt tcgcaactct atatctggat CD 1001 tagattatgg agaagatgag ggaggctttc ccgttctaca tgcttattca CD 1051 caagttagaa atcaattaat aaaccgactc accaacttcc tttcgataat CD 1101 taggaaatca aaccttcctc ttggtgggaa aatagttatt gacgtcagta CD 1151 ataggatcaa atccgagaga gtcttttttc catcgggaat gaaaaaaaat CD 1201 atgccgttta ccaaaatatc tggcaagaaa cttaggttag caagtggcgg CD 1251 atacttcgac ttcgttgaga ttttcccaac ctattttaaa gcatccttag CD 1301 agatacctag ggaaacaact aatcaaaatg gaaatactaa ttttttagac CD 1351 gaattggaag gaggggggaa cctagattca atttattctc tagttagatt CD 1401 atatgggcga aatagaatca tacctctcta ctcaacatac atatttcttc CD 1451 tccacgatta tttttgtgcg ttatccactg aatatttctt ccgaatcaaa CD 1501 tattggttgg atggctggac gggtggcaga gtatacatca gtttcacggg CD 1551 aattgcaact gaagaaacag tattcaagtg gaaggatgac gtagagcgtc CD 1601 tatcgaacga atatgttacc tcccatattg gtcagtgtag gaatgttcaa CD 1651 tcaaatctgt atagacggct cgatgcaaca cggaatttgt atgtttcgcc CD 1701 tgttaagaaa ttcttgggag aagcaatgaa gtacaacttg gcagaattaa CD 1751 tctgccgtgt gtcactagtg ggaaacgagt tgctaaataa gactggtgtc CD 1801 agtctccgta gtaccaatag acataccaag aaatattttc accgatttct CD 1851 cgatgtgtta tttctttcca aaatgattgt tgctgaggct actcgccaga CD 1901 aaattctgat agataccgtt gattactgca tcgaaaaatt ggacgacata CD 1951 gattttgaaa aattgaacaa aatggatcgt attgagcttg attttttctc CD 2001 aagtttatcc gatggttaca ttgacgaaga gatacttctt ttcaaaacaa CD 2051 ttcttgaaga aagaaaaagt ttcttagtcg agtctagact gttaacaagt CD 2101 gaaaaatcgg taggctcctc gactgcgcta aaacctgcgt cgaatttcac CD 2151 ctctctcggg ttgtcttgca tcgaagctat ccgagcagga ttctcgggtg CD 2201 aggctctttc tattatgggg agacaaaatt ggaatctgtt tgtgtgtgat CD 2251 ttaagccgtg gggggaattc aattaggaat attggtgaga gtcttccaaa CD 2301 aaacatttcc gatcaaatgg atgaaataaa caactcacct atacggagcc CD 2351 gggctggaaa caactttatc cagagaatca aaaggggttt cttcgtcggg CD 2401 aactgtagca atagttatct cgacgtgtta gaaaactttt atttgagctc CD 2451 cgacgagaaa gccatctcct catctgatat cctttcactt attcacctcc CD 2501 aattgtcaga ttcgttatca tccaattttt cgaaacaaac ggcaggggag CD 2551 gtagctgatc acttactcac accaattcaa cttatttcgc ctaacctgca CD 2601 tgaatccgcg accatagtaa ctcatttgga tggacttccc aattctattt CD 2651 cggatctgaa tgggttactg gcaagtttga gctcatcccc ccgtgaagcg CD 2701 acagactcgt tcctattttc gtgtagtaat gatggagttt ctttggagga CD 2751 ggcgtcgaga aactccgact cgtggtcgga tcatcagcga acccaacctc CD 2801 gtcggaatct gctggtatta gatcgagtca attcggagaa gtttttcaaa CD 2851 gatggattag actcgagaaa tggttccccc acgagtcaag tctatcgaaa CD 2901 cgggttgtct attgagtatt tttgggaacc gaaaaaattg gatacacctt CD 2951 attggtcgct aagattctca ttattcaatg gcgtaacatc aagatttata CD 3001 gcgggatcaa ttggggagga tgttacccgc caagatgcgg ggttcgcaga CD 3051 ttcatctgcc cgggaagaag ctacttgccc gtcccatttc atcaatttca CD 3101 atgaattatc agaagatttg aacagatata agatctcttg gattttctgg CD 3151 agagacagta tcggcgaaaa ttggagctta ttgggagatt atatacccct CD 3201 gttttttacc cccacctggt ggagatactt ctgcgatcta attacaaaag CD 3251 catatccgga aatagtactt aagataagtt acgactcaaa tcatgatctt CD 3301 cgtagaattt ctgaaggaat tgctaggggt ttagtaggta gcgcgaaggg CD 3351 ctatttactc cgaagcctgc aaaggctagg attgatattc ggaaacaatt CD 3401 ctattaatac tatatcatcc gagacagatc ttctcattct cgaaaaaatc CD 3451 cctgataaag cggagatttt acatccgggg gaatggtcgg tatctcaatt CD 3501 ttccaatagg cctatctcct attgctgcat cctctcaata ttacttgttc CD 3551 tcctgtcatt gaaacatcct ttgtctgccg tttcgggttc caattTcttt CD 3601 catttgtgga aacgttttgc tactattgac tatttaacag acccaatgcg CD 3651 tggatcctat ttgagaaagg taatgtattc ccccccgaca agcCaaatgt CD 3701 taacaagaga tctactaatt cattctctca atagattctt gaattgtgta CD 3751 agCaatatac tttttttcct tttcgtgaaa aatgaaattg attcgtggat CD 3801 atttcgtaga gaaagctctg atattttaga tagtaataaa gaactactga CD 3851 ctcaacattt ggtaacgact aagattctct acaggtatgc atcgaaatca CD 3901 aaattcaatt atgatttatc gagcaacaag atttttcatg aaccttaccc CD 3951 gcaagataga tccaacgttt tggcatactt acttcaattc tggcaaaatg CD 4001 atctattggg tcacaagatt cgtaagttgg atcctgcgga gaagtgggct CD 4051 ttttccgccc ttgggagaga tattctattt tcggcaacaa caaggcgaag CD 4101 agacagtcta ctaaatatgc catgtcgtga catacctatt tcactccaat CD 4151 cgggattatt accatccaaa ggaattttgc tagtaggacc tgtagaaact CD 4201 ggcagatcct ctcttattag agatgtagca tccaactcct actttccagt CD 4251 ggtgaaacta ccactcaaaa aattcatata caaccgatct tttttcaata CD 4301 atgtacgtgg aaatttcatc tcgaaagaga gcgtacaccg attaaatatc CD 4351 gtctttgaaa tagcgaaaga aatgtctcct tgtacattat ggattcaaga CD 4401 tattcatgaa ttgaatattt gtcgttcgta taataagcta gaagctgatc CD 4451 ccaaatttct actttgccaa atattgaaga gtattggtca caagctcggc CD 4501 aactccgaca tccgcgagaa tgtcgttatt gccacgactc acgtacctgc CD 4551 gaggatagat ccagcttTag tagctccgaa tcggttaaac Caattaataa CD 4601 attttcggag gtccaatggg cgtcaacgtc agaaagaatt gtcaattcta CD 4651 ttacgtatca aaggtttcga ggtaggggct aatccgactc ttcttgagag CD 4701 tactgtgtct ggaactgcag gttatagtaa acgagattta cttcttctcg CD 4751 ctaatgaagc gttattgata ggtacttcca aagggagaaa gtttgtatgt CD 4801 agcaacacaa ttggattagc tttgcatagg caacattcga ctgttagtga CD 4851 tatgggcaat gagatggaat ctaattctga atgggaaatc tcttcctaca CD 4901 agatggcaga agtaaagaat agtttgacag atatttctct cacaactttt CD 4951 ccatttattg gtcgtgacga gttaaaaatg cgattttatt acttgtctaa CD 5001 ctggtatgtg gaaccttcaa caaccgaatc aacaattgat gaattcacta CD 5051 tgtttttgca tctcccagag ctaatagcca aattagtagc tcgcgattcg CD 5101 ttccaaatgg ataggggaaa agaagataat ttcattgtta tcgacaaact CD 5151 cgtagagaat gacttaaacc tagcttgtgg cgtcctagaa aacctctcga CD 5201 ataatttccc acgtccggaa atttgtaggg gagagagccg gcgcagtaat CD 5251 agttttcctc cccctcttcc tattggaaaa cccaagtatt gctcaggtgt CD 5301 aacctctcta agtcgctctt ccaaatctct gaaaagaggg agaattagta CD 5351 gtctaaccga tttcgagatg caacagtcac ccgaattaag aaactcagcg CD 5401 gcagagatat cgcgtgagat tacttggtcc cgcaaggctt ggcgtctccg CD 5451 tttcctgcga agcgggactt acgaattgat gggggtatta tccgaaccca CD 5501 accatttgta taacttaatt cttctttact acaatcagaa ttacataccc CD 5551 caacaagatt ttgaattcag taagattagg ggaaagagaa gtaagtggcg CD 5601 cgagaaaagc gggtatcttt tcagcttcga gaaatctgtc actaatggaa CD 5651 cagataattc cattaaaaga ttggaaaacc gattggataa tatgttgtta CD 5701 cgtgagcaat ttctcgaatt gggaatctct ggcgattcat ctaatgagta CD 5751 tgaaacacat tgtgatcgat tgaatgaaat gactcgactc ttcggggggc CD 5801 gcttcatctg ggaccccatg cttctgttcc agccagaccc taacattcct CD 5851 tccctgcgcc gcaacttgtt gtcaacgaaa gaactggcac ggaggcttca CD 5901 caccatttac ggtatgagaa ggcagcgcct tcagaagatg tcaaataata CD 5951 aaattaaaga ttttttcctc tatagcgaag agaatccaaa attgaaaccc CD 6001 gactcatctc tcaatcggcg gaataatctt cctctggaag aggaggagcg CD 6051 agattccgaa tacgtcaggg aaacctcttc cgtagatata catctgcaat CD 6101 atccgcagat atttactccc gttcgtttgg gttgctacgc ggtagcggag CD 6151 gatttcccgg aacgatttct tcggtttagg cttctggttc atagaaacaa CD 6201 atggctgaga cggaaccgtt ccccatttcg ggattttctt atttataata CD 6251 tgttgcttga aacttatgaa tatctatcca atccgtttcg gtttggtaaa CD 6301 gcatcactgg attga SQ SEQUENCE 2105 AA; MVKKVIEKGR GVRGRDYSSK VWDFLEIDAL NYFSESLKNH YLEELVVSPA STAEPFIRLS DLRFLSLLFL RNLRHSIMRG SGVTLEMLML LAIPIFMHCL SYKNSIDRGF VLAKVIDGGE GIRKKQTENY GNFSYDCFLQ FKRFLSVGRD GKREILEPYY LGLNKDISIS ASSSKEEREI RYDVTTPLPS GRWKARIMRR DSLLFGGDRF KGKTEGIQVV RGGRYLQDLV RFFKFYKNLV VSKNGSDCHQ NNFDSLLLRE ICDKQDLGRL QAIRLGNNSL SSVVLYPFES ESADSADPRR DGSAFPSEQE VFSNLYSFTS REKTILFRNS ISGLDYGEDE GGFPVLHAYS QVRNQLINRL TNFLSIIRKS NLPLGGKIVI DVSNRIKSER VFFPSGMKKN MPFTKISGKK LRLASGGYFD FVEIFPTYFK ASLEIPRETT NQNGNTNFLD ELEGGGNLDS IYSLVRLYGR NRIIPLYSTY IFLLHDYFCA LSTEYFFRIK YWLDGWTGGR VYISFTGIAT EETVFKWKDD VERLSNEYVT SHIGQCRNVQ SNLYRRLDAT RNLYVSPVKK FLGEAMKYNL AELICRVSLV GNELLNKTGV SLRSTNRHTK KYFHRFLDVL FLSKMIVAEA TRQKILIDTV DYCIEKLDDI DFEKLNKMDR IELDFFSSLS DGYIDEEILL FKTILEERKS FLVESRLLTS EKSVGSSTAL KPASNFTSLG LSCIEAIRAG FSGEALSIMG RQNWNLFVCD LSRGGNSIRN IGESLPKNIS DQMDEINNSP IRSRAGNNFI QRIKRGFFVG NCSNSYLDVL ENFYLSSDEK AISSSDILSL IHLQLSDSLS SNFSKQTAGE VADHLLTPIQ LISPNLHESA TIVTHLDGLP NSISDLNGLL ASLSSSPREA TDSFLFSCSN DGVSLEEASR NSDSWSDHQR TQPRRNLLVL DRVNSEKFFK DGLDSRNGSP TSQVYRNGLS IEYFWEPKKL DTPYWSLRFS LFNGVTSRFI AGSIGEDVTR QDAGFADSSA REEATCPSHF INFNELSEDL NRYKISWIFW RDSIGENWSL LGDYIPLFFT PTWWRYFCDL ITKAYPEIVL KISYDSNHDL RRISEGIARG LVGSAKGYLL RSLQRLGLIF GNNSINTISS ETDLLILEKI PDKAEILHPG EWSVSQFSNR PISYCCILSI LLVLLSLKHP LSAVSGSNFF HLWKRFATID YLTDPMRGSY LRKVMYSPPT SQMLTRDLLI HSLNRFLNCV SNILFFLFVK NEIDSWIFRR ESSDILDSNK ELLTQHLVTT KILYRYASKS KFNYDLSSNK IFHEPYPQDR SNVLAYLLQF WQNDLLGHKI RKLDPAEKWA FSALGRDILF SATTRRRDSL LNMPCRDIPI SLQSGLLPSK GILLVGPVET GRSSLIRDVA SNSYFPVVKL PLKKFIYNRS FFNNVRGNFI SKESVHRLNI VFEIAKEMSP CTLWIQDIHE LNICRSYNKL EADPKFLLCQ ILKSIGHKLG NSDIRENVVI ATTHVPARID PALVAPNRLN QLINFRRSNG RQRQKELSIL LRIKGFEVGA NPTLLESTVS GTAGYSKRDL LLLANEALLI GTSKGRKFVC SNTIGLALHR QHSTVSDMGN EMESNSEWEI SSYKMAEVKN SLTDISLTTF PFIGRDELKM RFYYLSNWYV EPSTTESTID EFTMFLHLPE LIAKLVARDS FQMDRGKEDN FIVIDKLVEN DLNLACGVLE NLSNNFPRPE ICRGESRRSN SFPPPLPIGK PKYCSGVTSL SRSSKSLKRG RISSLTDFEM QQSPELRNSA AEISREITWS RKAWRLRFLR SGTYELMGVL SEPNHLYNLI LLYYNQNYIP QQDFEFSKIR GKRSKWREKS GYLFSFEKSV TNGTDNSIKR LENRLDNMLL REQFLELGIS GDSSNEYETH CDRLNEMTRL FGGRFIWDPM LLFQPDPNIP SLRRNLLSTK ELARRLHTIY GMRRQRLQKM SNNKIKDFFL YSEENPKLKP DSSLNRRNNL PLEEEERDSE YVRETSSVDI HLQYPQIFTP VRLGCYAVAE DFPERFLRFR LLVHRNKWLR RNRSPFRDFL IYNMLLETYE YLSNPFRFGK ASLD* // ID AY178864_87 STANDARD; PRT; 151 AA. AC AY178864; DT Tue Jul 21 07:03:28 2009 DE Adiantum capillus-veneris chloroplast, complete genome. OS chloroplast Adiantum capillus-veneris OC Adiantum capillus-veneris RN [1] RL Am. J. Bot. 84 (10), 1429-1440 (1997) RL PUBMED 12755170 FT Full length CDS FT GENE : rps7 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP29452.3 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 136982 - 137434 FT DIRECTIONS : negative FT EDITING : 1 A(gCg) -> V(gTg) FT EDITING : 47 *(Taa) -> Q(Caa) FT EDITING : 99 S(tCa) -> L(tTa) FT EDITING : 115 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 453 NT; CD 1 gCgaacgaaa ttagaaatat cgaatcggat ccaatttatc gcaatcgatt CD 51 ggcaaacatg ctagttgatc gtatcctgaa aaacggcaaa aaatcactag CD 101 cttatcagat tttttatcag gctatgaagc ggattagaTa aaagacaaat CD 151 aggaacccac tgtctgttct gcgacaggca gtgcgtgggg taactcccga CD 201 tgtagtcaca gaaaccaaac gtgtgggtgg atcaacttat cgagttccca CD 251 ttgaagtagt acctgcaaaa ggaaaagctt tggccatccg gtggtCattg CD 301 atcgcatgtc gaaaacgctc aggtcgaagt atggctttaa ggtCgagtga CD 351 tgaattgata gatgccgcca gaaattctgg gagtgccata cggaagaagg CD 401 aagagactca taaagttgcg gaagctaaca aagcttttgc ccacttccgt CD 451 tag FT EDITED CDNA CD 1 gTgaacgaaa ttagaaatat cgaatcggat ccaatttatc gcaatcgatt CD 51 ggcaaacatg ctagttgatc gtatcctgaa aaacggcaaa aaatcactag CD 101 cttatcagat tttttatcag gctatgaagc ggattagaCa aaagacaaat CD 151 aggaacccac tgtctgttct gcgacaggca gtgcgtgggg taactcccga CD 201 tgtagtcaca gaaaccaaac gtgtgggtgg atcaacttat cgagttccca CD 251 ttgaagtagt acctgcaaaa ggaaaagctt tggccatccg gtggtTattg CD 301 atcgcatgtc gaaaacgctc aggtcgaagt atggctttaa ggtTgagtga CD 351 tgaattgata gatgccgcca gaaattctgg gagtgccata cggaagaagg CD 401 aagagactca taaagttgcg gaagctaaca aagcttttgc ccacttccgt CD 451 tag SQ SEQUENCE 151 AA; VNEIRNIESD PIYRNRLANM LVDRILKNGK KSLAYQIFYQ AMKRIRQKTN RNPLSVLRQA VRGVTPDVVT ETKRVGGSTY RVPIEVVPAK GKALAIRWLL IACRKRSGRS MALRLSDELI DAARNSGSAI RKKEETHKVA EANKAFAHFR * // ID AY258270_1 STANDARD; PRT; 197 AA. AC AY258270; DT Tue Jul 21 07:03:29 2009 DE Cucumis sativus MSC16 mitochondrial ribosomal protein L5 (rpl5) OS mitochondrion Cucumis sativus (cucumber) OC Cucumis sativus RN [1] RL Curr. Genet. 45 (1), 45-53 (2004) RL PUBMED 14586555 FT Full length CDS FT GENE : rpl5 FT NOTE : RPL5 FT LOCUS_TAG : FT PROTEIN_ID : AAP33159.1 FT PROTEIN_NAME : ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1773 - 2363 FT DIRECTIONS : positive FT EDITING : 15 S(tCa) -> L(tTa) FT EDITING : 19 P(cCg) -> L(cTg) FT EDITING : 34 S(tCg) -> L(tTg) FT EDITING : 60 R(Cgc) -> C(Tgc) FT EDITING : 175 P(cCa) -> L(cTa) FT EDITING : 176 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 591 NT; CD 1 atgggtccga gcctacaact ccagtttcat tacgaagata tatCacgtca CD 51 ggagcCgttg ctcaaactga attacaccaa cgttatggaa gttcctggat CD 101 Cgtctgaaat aagagtcgtg ccaaaggaac cctatgattt cagaagcaaa CD 151 aatggaaaat tggctatgga gattctgCgc ggtcagaaat tgatacagac CD 201 aaggggttcg acaggaaagt cctttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgagaaag cactctccga CD 301 gggcattcaa tgtttcattt ttttttcaaa ataattatag gaatagtact CD 351 gtctttctta aattctccgg gcgaaatacg gaaaaactcc attcaattcc CD 401 cgatggaaac ggagtttttc gaattcttcc cggaactggc agatcatttt CD 451 gagatcttct ctaatactct agggttccat gtgactattg tcacttcggc CD 501 caagacacaa gatgagactt tacCacCgtg gagcggcttt ttgagaaaaa CD 551 aatggaattt gaatttgaaa aaaagaaaaa gaaaagattg a FT EDITED CDNA CD 1 atgggtccga gcctacaact ccagtttcat tacgaagata tatTacgtca CD 51 ggagcTgttg ctcaaactga attacaccaa cgttatggaa gttcctggat CD 101 Tgtctgaaat aagagtcgtg ccaaaggaac cctatgattt cagaagcaaa CD 151 aatggaaaat tggctatgga gattctgTgc ggtcagaaat tgatacagac CD 201 aaggggttcg acaggaaagt cctttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgagaaag cactctccga CD 301 gggcattcaa tgtttcattt ttttttcaaa ataattatag gaatagtact CD 351 gtctttctta aattctccgg gcgaaatacg gaaaaactcc attcaattcc CD 401 cgatggaaac ggagtttttc gaattcttcc cggaactggc agatcatttt CD 451 gagatcttct ctaatactct agggttccat gtgactattg tcacttcggc CD 501 caagacacaa gatgagactt tacTacTgtg gagcggcttt ttgagaaaaa CD 551 aatggaattt gaatttgaaa aaaagaaaaa gaaaagattg a SQ SEQUENCE 197 AA; MGPSLQLQFH YEDILRQELL LKLNYTNVME VPGLSEIRVV PKEPYDFRSK NGKLAMEILC GQKLIQTRGS TGKSFRSNPF LESNKDKGYV SDLARESTLR GHSMFHFFFK IIIGIVLSFL NSPGEIRKNS IQFPMETEFF EFFPELADHF EIFSNTLGFH VTIVTSAKTQ DETLLLWSGF LRKKWNLNLK KRKRKD* // ID AY258273_1 STANDARD; PRT; 197 AA. AC AY258273; DT Tue Jul 21 07:03:29 2009 DE Cucumis sativus MSC16 ribosomal protein L5 (rpl5) gene, complete OS mitochondrion Cucumis sativus (cucumber) OC Cucumis sativus RN [1] RL Curr. Genet. 45 (1), 45-53 (2004) RL PUBMED 14586555 FT Full length CDS FT GENE : rpl5 FT NOTE : RPL5 FT LOCUS_TAG : FT PROTEIN_ID : AAP33161.1 FT PROTEIN_NAME : ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 7881 - 8471 FT DIRECTIONS : positive FT EDITING : 15 S(tCa) -> L(tTa) FT EDITING : 19 P(cCg) -> L(cTg) FT EDITING : 34 S(tCg) -> L(tTg) FT EDITING : 60 R(Cgc) -> C(Tgc) FT EDITING : 175 P(cCa) -> L(cTa) FT EDITING : 176 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 591 NT; CD 1 atgggtccga gcctacaact ccagtttcat tacgaagata tatCacgtca CD 51 ggagcCgttg ctcaaactga attacaccaa cgttatggaa gttcctggat CD 101 Cgtctgaaat aagagtcgtg ccaaaggaac cctatgattt cagaagcaaa CD 151 aatggaaaat tggctatgga gattctgCgc ggtcagaaat tgatacagac CD 201 aaggggttcg acaggaaagt cctttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgagaaag cactctccga CD 301 gggcattcaa tgtttcattt ttttttcaaa ataattatag gaatagtact CD 351 gtctttctta aattctccgg gcgaaatacg gaaaaactcc attcaattcc CD 401 cgatggaaac ggagtttttc gaattcttcc cggaactggc agatcatttt CD 451 gagatcttct ctaatactct agggttccat gtgactattg tcacttcggc CD 501 caagacacaa gatgagactt tacCacCgtg gagcggcttt ttgagaaaaa CD 551 aatggaattt gaatttgaaa aaaagaaaaa gaaaagattg a FT EDITED CDNA CD 1 atgggtccga gcctacaact ccagtttcat tacgaagata tatTacgtca CD 51 ggagcTgttg ctcaaactga attacaccaa cgttatggaa gttcctggat CD 101 Tgtctgaaat aagagtcgtg ccaaaggaac cctatgattt cagaagcaaa CD 151 aatggaaaat tggctatgga gattctgTgc ggtcagaaat tgatacagac CD 201 aaggggttcg acaggaaagt cctttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgagaaag cactctccga CD 301 gggcattcaa tgtttcattt ttttttcaaa ataattatag gaatagtact CD 351 gtctttctta aattctccgg gcgaaatacg gaaaaactcc attcaattcc CD 401 cgatggaaac ggagtttttc gaattcttcc cggaactggc agatcatttt CD 451 gagatcttct ctaatactct agggttccat gtgactattg tcacttcggc CD 501 caagacacaa gatgagactt tacTacTgtg gagcggcttt ttgagaaaaa CD 551 aatggaattt gaatttgaaa aaaagaaaaa gaaaagattg a SQ SEQUENCE 197 AA; MGPSLQLQFH YEDILRQELL LKLNYTNVME VPGLSEIRVV PKEPYDFRSK NGKLAMEILC GQKLIQTRGS TGKSFRSNPF LESNKDKGYV SDLARESTLR GHSMFHFFFK IIIGIVLSFL NSPGEIRKNS IQFPMETEFF EFFPELADHF EIFSNTLGFH VTIVTSAKTQ DETLLLWSGF LRKKWNLNLK KRKRKD* // ID AY258275_1 STANDARD; PRT; 197 AA. AC AY258275; DT Tue Jul 21 07:03:29 2009 DE Cucumis sativus Calypso ribosomal protein L5 (rpl5) gene, complete OS mitochondrion Cucumis sativus (cucumber) OC Cucumis sativus RN [1] RL Curr. Genet. 45 (1), 45-53 (2004) RL PUBMED 14586555 FT Full length CDS FT GENE : rpl5 FT NOTE : RPL5 FT LOCUS_TAG : FT PROTEIN_ID : AAP33162.1 FT PROTEIN_NAME : ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3364 - 3954 FT DIRECTIONS : positive FT EDITING : 15 S(tCa) -> L(tTa) FT EDITING : 19 P(cCg) -> L(cTg) FT EDITING : 34 S(tCg) -> L(tTg) FT EDITING : 60 R(Cgc) -> C(Tgc) FT EDITING : 175 P(cCa) -> L(cTa) FT EDITING : 176 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 591 NT; CD 1 atgggtccga gcctacaact ccagtttcat tacgaagata tatCacgtca CD 51 ggagcCgttg ctcaaactga attacaccaa cgttatggaa gttcctggat CD 101 Cgtctgaaat aagagtcgtg ccaaaggaac cctatgattt cagaagcaaa CD 151 aatggaaaat tggctatgga gattctgCgc ggtcagaaat tgatacagac CD 201 aaggggttcg acaggaaagt cctttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgagaaag cactctccga CD 301 gggcattcaa tgtttcattt ttttttcaaa ataattatag gaatagtact CD 351 gtctttctta aattctccgg gcgaaatacg gaaaaactcc attcaattcc CD 401 cgatggaaac ggagtttttc gaattcttcc cggaactggc agatcatttt CD 451 gagatcttct ctaatactct agggttccat gtgactattg tcacttcggc CD 501 caagacacaa gatgagactt tacCacCgtg gagcggcttt ttgagaaaaa CD 551 aatggaattt gaatttgaaa aaaagaaaaa gaaaagattg a FT EDITED CDNA CD 1 atgggtccga gcctacaact ccagtttcat tacgaagata tatTacgtca CD 51 ggagcTgttg ctcaaactga attacaccaa cgttatggaa gttcctggat CD 101 Tgtctgaaat aagagtcgtg ccaaaggaac cctatgattt cagaagcaaa CD 151 aatggaaaat tggctatgga gattctgTgc ggtcagaaat tgatacagac CD 201 aaggggttcg acaggaaagt cctttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgagaaag cactctccga CD 301 gggcattcaa tgtttcattt ttttttcaaa ataattatag gaatagtact CD 351 gtctttctta aattctccgg gcgaaatacg gaaaaactcc attcaattcc CD 401 cgatggaaac ggagtttttc gaattcttcc cggaactggc agatcatttt CD 451 gagatcttct ctaatactct agggttccat gtgactattg tcacttcggc CD 501 caagacacaa gatgagactt tacTacTgtg gagcggcttt ttgagaaaaa CD 551 aatggaattt gaatttgaaa aaaagaaaaa gaaaagattg a SQ SEQUENCE 197 AA; MGPSLQLQFH YEDILRQELL LKLNYTNVME VPGLSEIRVV PKEPYDFRSK NGKLAMEILC GQKLIQTRGS TGKSFRSNPF LESNKDKGYV SDLARESTLR GHSMFHFFFK IIIGIVLSFL NSPGEIRKNS IQFPMETEFF EFFPELADHF EIFSNTLGFH VTIVTSAKTQ DETLLLWSGF LRKKWNLNLK KRKRKD* // ID AY293019_1 STANDARD; PRT; 142 AA. AC AY293019; DT Tue Jul 21 07:03:30 2009 DE Sanguinaria canadensis small subunit ribosomal protein (rps11) OS mitochondrion Sanguinaria canadensis (red puccoon) OC Sanguinaria canadensis RN [1] RL Nature 424 (6945), 197-201 (2003) RL PUBMED 12853958 FT C-terminal not determined FT GENE : rps11 FT NOTE : Rps11 FT LOCUS_TAG : FT PROTEIN_ID : AAP76349.1 FT PROTEIN_NAME : small subunit ribosomal protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 376 - 801 FT DIRECTIONS : positive FT EDITING : 26 F(ttT) -> F(ttC) FT EDITING : 31 L(tTg) -> S(tCg) FT EDITING : 48 L(cTa) -> P(cCa) FT EDITING : 49 L(cTg) -> P(cCg) FT EDITING : 117 F(ttT) -> F(ttC) FT CODON_START : 1 CL CDNALEN 426 NT; CD 1 atgccccagg aaaaaacgac ggccgagcgc gtagagcaac aagttattgc CD 51 gggcaggagt ttcaaatcca tgaacttTgt acagagcatt tTggaggaag CD 101 atgagcaatt ggagcggaaa aacaaagatt ttgtccattt acTacTgatc CD 151 cacaataata cctttgttac cgtgacggat gctaggggga ataaaaaaac CD 201 tggggcctcc gcaggttgtt tggaggaaag aaaagggcgg tctcgtcttt CD 251 ctcggtatgc tgctgaagct actgcggaac atgtcgggcg atccgccaga CD 301 aagatgggtt tgaagtcagt tgtaatgaaa gtgaaaggat ctagttattt CD 351 Taggaaaaag aaaaaagtga tcttgagctg gagagaaggt tttcgaggtg CD 401 aaggagtagg agatcaatct ccaatt FT EDITED CDNA CD 1 atgccccagg aaaaaacgac ggccgagcgc gtagagcaac aagttattgc CD 51 gggcaggagt ttcaaatcca tgaacttCgt acagagcatt tCggaggaag CD 101 atgagcaatt ggagcggaaa aacaaagatt ttgtccattt acCacCgatc CD 151 cacaataata cctttgttac cgtgacggat gctaggggga ataaaaaaac CD 201 tggggcctcc gcaggttgtt tggaggaaag aaaagggcgg tctcgtcttt CD 251 ctcggtatgc tgctgaagct actgcggaac atgtcgggcg atccgccaga CD 301 aagatgggtt tgaagtcagt tgtaatgaaa gtgaaaggat ctagttattt CD 351 Caggaaaaag aaaaaagtga tcttgagctg gagagaaggt tttcgaggtg CD 401 aaggagtagg agatcaatct ccaatt SQ SEQUENCE 142 AA; MPQEKTTAER VEQQVIAGRS FKSMNFVQSI SEEDEQLERK NKDFVHLPPI HNNTFVTVTD ARGNKKTGAS AGCLEERKGR SRLSRYAAEA TAEHVGRSAR KMGLKSVVMK VKGSSYFRKK KKVILSWREG FRGEGVGDQS PI // ID AY345867_1 STANDARD; PRT; 94 AA. AC AY345867; DT Tue Jul 21 07:03:33 2009 DE Cycas revoluta ribosomal protein S19 (rps19), ribosomal protein S3 OS mitochondrion Cycas revoluta OC Cycas revoluta RN [1] RL J. Mol. Evol. 60 (2), 196-206 (2005) RL PUBMED 15785848 FT Full length CDS FT GENE : rps19 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR01944.1 FT PROTEIN_NAME : ribosomal protein S19 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 6 - 287 FT DIRECTIONS : positive FT EDITING : 11 S(tCc) -> F(tTc) FT EDITING : 15 L(Ctc) -> F(Ttc) FT EDITING : 16 S(tCg) -> L(tTg) FT EDITING : 17 S(tCg) -> L(tTg) FT EDITING : 32 R(Cgg) -> W(Tgg) FT EDITING : 37 P(Ccc) -> S(Tcc) FT EDITING : 42 S(tCt) -> F(tTt) FT EDITING : 46 F(ttC) -> F(ttT) FT EDITING : 55 S(tCt) -> F(tTt) FT EDITING : 69 S(tCt) -> F(tTt) FT EDITING : 72 S(tCc) -> F(tTc) FT EDITING : 74 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 282 NT; CD 1 atgccacgac gatctatatg gaagggcagt tCcgttgatg ctCtctCgtC CD 51 gaaaatgagg agcaagagag agaatatttc tagcaggaaa attCggtcac CD 101 gtagatctCc cattttgcca gaatCtgttg attgcttCgt acgaatttat CD 151 aacggaaaaa cctCtgttcg ttgcaagatc actgaaggaa aggttggtca CD 201 taaatCtgga gagtCcgctt Ctgcacggaa acgaaaacct tcgagaaccg CD 251 atatcggacc gggaagaaag gggaaaaggt aa FT EDITED CDNA CD 1 atgccacgac gatctatatg gaagggcagt tTcgttgatg ctTtctTgtT CD 51 gaaaatgagg agcaagagag agaatatttc tagcaggaaa attTggtcac CD 101 gtagatctTc cattttgcca gaatTtgttg attgcttTgt acgaatttat CD 151 aacggaaaaa cctTtgttcg ttgcaagatc actgaaggaa aggttggtca CD 201 taaatTtgga gagtTcgctt Ttgcacggaa acgaaaacct tcgagaaccg CD 251 atatcggacc gggaagaaag gggaaaaggt aa SQ SEQUENCE 94 AA; MPRRSIWKGS FVDAFLLKMR SKRENISSRK IWSRRSSILP EFVDCFVRIY NGKTFVRCKI TEGKVGHKFG EFAFARKRKP SRTDIGPGRK GKR* // ID AY345867_2 STANDARD; PRT; 580 AA. AC AY345867; DT Tue Jul 21 07:03:33 2009 DE Cycas revoluta ribosomal protein S19 (rps19), ribosomal protein S3 OS mitochondrion Cycas revoluta OC Cycas revoluta RN [1] RL J. Mol. Evol. 60 (2), 196-206 (2005) RL PUBMED 15785848 FT Full length CDS FT GENE : rps3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR01945.1 FT PROTEIN_NAME : ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 25/2 FT INTRON 90/0 FT EDITING : 14 P(cCg) -> L(cTg) FT EDITING : 20 P(Cca) -> S(Tca) FT EDITING : 21 S(agC) -> S(agT) FT EDITING : 22 R(Cgg) -> W(Tgg) FT EDITING : 23 S(tCc) -> F(tTc) FT EDITING : 28 H(Cat) -> Y(Tat) FT EDITING : 74 S(tCt) -> F(tTt) FT EDITING : 171 V(gtC) -> V(gtT) FT EDITING : 186 A(gcC) -> A(gcT) FT EDITING : 207 S(tCC) -> F(tTT) FT EDITING : 212 F(ttC) -> F(ttT) FT EDITING : 245 S(tCg) -> L(tTg) FT EDITING : 267 P(cCc) -> L(cTc) FT EDITING : 325 R(Cgc) -> C(Tgc) FT EDITING : 343 S(tCg) -> L(tTg) FT EDITING : 355 P(cCa) -> L(cTa) FT EDITING : 370 P(cCa) -> L(cTa) FT EDITING : 454 T(acC) -> T(acT) FT EDITING : 456 I(atC) -> I(atT) FT EDITING : 470 P(cCa) -> L(cTa) FT EDITING : 479 P(cCg) -> L(cTg) FT EDITING : 512 R(Cgt) -> C(Tgt) FT EDITING : 516 S(tCg) -> L(tTg) FT EDITING : 537 S(tCt) -> F(tTt) FT EDITING : 543 H(Cat) -> Y(Tat) FT CODON_START : 1 CL CDNALEN 1740 NT; CD 1 atggcacgag aagtcaatcc gatttcagtc agacttaatc Cgaatcgtag CD 51 ttcagatCca agCCggtCca gtgattatta tCatgggaaa ttggtgtatc CD 101 aagatgtcaa tcttagagat tatttcggtt cgatacgtcc acctacgaga CD 151 aaaacctttg gctttcgtct cggtaggtgt attattcatc attttaccaa CD 201 aaggacattc attcatttat Ctcttccccg tcgaccacga cgactgaaac CD 251 gacgcggcaa atcaaggccc ggaaagggcc ggtggtgggc atttgggaaa CD 301 gtcaggtcga tcgggcccga cgacggtaca gaggaagaac gaaacgaagt CD 351 gaggggccgc cggcgggggg caggaaaaac tgtcaagtcg atcaggctcg CD 401 acgaccgtac aggggaagag cgaaacgaag tcaggatttg gccgagaaaa CD 451 aagcaacgct atggatacca tgaccgatca ccatcgagac agaagaatct CD 501 ttcgaaatgg gtCagcggtt ggatggccta caagcatcca atgagtggga CD 551 aatacgcCgc gaagaagagg caatatgtaa atgacatagc gttctcgata CD 601 gaagatgaca cttatgtttC Cggaaaaaca aagttCttca agttcctttt CD 651 cccaaagaag ttccgctccg acggcccgac gagtaagaga cttctacaga CD 701 ccatccctgc tgtgcgtccc tcctttaatt attCggtcat gcaatacttc CD 751 tttcatatga agaaccaaat tcattttgac cccatagacg tcgtagttcC CD 801 caataatctc gtggcaccgg gcgtggctga accgggggga gcggatgaac CD 851 agggaggaag cttagataag agaatacgct ctcgcattgg tttttttgta CD 901 gaaagcttga ccgccaagac cgagcagggc gagtttttgg ccgaagccaa CD 951 aaaaaggttt acccacttaa tcCgccaagc gaatgattct cgctttgcga CD 1001 gaacaacgaa aacctgttgg tccatatCgc tctttccttt cttcggtgct CD 1051 acctttttct ttcCaaggga taacctcggg gtgtctaata acaaaattga CD 1101 tgatgcccCa ccactaaggg aacaactcct gggtaaattc agaagaaaat CD 1151 taaggaacct cctgggtaag gagaaggtaa tcaaattgat ggaaaaatta CD 1201 atagacctag gtgggatagg agaattgata aagggaatag ggatgataga CD 1251 tgctataata ctgagaaaca gaagtggaag aatcccgtac gggtacaact CD 1301 attatttgaa cgaagtgcaa aaaatgcgat ctttgttgtc tgatggaaca CD 1351 aacactaata cCtcaatCgg gtcggtcaag atcgaatctg tttatcaaag CD 1401 tgcttctcCa attgctcaag acatatcttt tcaacCgagg aacggaacag CD 1451 gatcatttcg ttccattttt gggcaaatag ttagggatat tacattcgta CD 1501 atgcccaaaa gggtgaaggg gatccgtatt tgtCgttcag gtcgatCgaa CD 1551 aggtgcagaa atagctagaa ctgaatgcag ggagtatgga aaaacatctt CD 1601 gtaacgtatC tgaccataaa attgatCatg cttctgcgaa agtatgtact CD 1651 cgttatggaa tctcaggtgt caaagtgtgg atctcatata gtaacgaaag CD 1701 aaagggacgt gccatatccg aaacgtacaa gatatcgtaa FT EDITED CDNA CD 1 atggcacgag aagtcaatcc gatttcagtc agacttaatc Tgaatcgtag CD 51 ttcagatTca agTTggtTca gtgattatta tTatgggaaa ttggtgtatc CD 101 aagatgtcaa tcttagagat tatttcggtt cgatacgtcc acctacgaga CD 151 aaaacctttg gctttcgtct cggtaggtgt attattcatc attttaccaa CD 201 aaggacattc attcatttat Ttcttccccg tcgaccacga cgactgaaac CD 251 gacgcggcaa atcaaggccc ggaaagggcc ggtggtgggc atttgggaaa CD 301 gtcaggtcga tcgggcccga cgacggtaca gaggaagaac gaaacgaagt CD 351 gaggggccgc cggcgggggg caggaaaaac tgtcaagtcg atcaggctcg CD 401 acgaccgtac aggggaagag cgaaacgaag tcaggatttg gccgagaaaa CD 451 aagcaacgct atggatacca tgaccgatca ccatcgagac agaagaatct CD 501 ttcgaaatgg gtTagcggtt ggatggccta caagcatcca atgagtggga CD 551 aatacgcTgc gaagaagagg caatatgtaa atgacatagc gttctcgata CD 601 gaagatgaca cttatgtttT Tggaaaaaca aagttTttca agttcctttt CD 651 cccaaagaag ttccgctccg acggcccgac gagtaagaga cttctacaga CD 701 ccatccctgc tgtgcgtccc tcctttaatt attTggtcat gcaatacttc CD 751 tttcatatga agaaccaaat tcattttgac cccatagacg tcgtagttcT CD 801 caataatctc gtggcaccgg gcgtggctga accgggggga gcggatgaac CD 851 agggaggaag cttagataag agaatacgct ctcgcattgg tttttttgta CD 901 gaaagcttga ccgccaagac cgagcagggc gagtttttgg ccgaagccaa CD 951 aaaaaggttt acccacttaa tcTgccaagc gaatgattct cgctttgcga CD 1001 gaacaacgaa aacctgttgg tccatatTgc tctttccttt cttcggtgct CD 1051 acctttttct ttcTaaggga taacctcggg gtgtctaata acaaaattga CD 1101 tgatgcccTa ccactaaggg aacaactcct gggtaaattc agaagaaaat CD 1151 taaggaacct cctgggtaag gagaaggtaa tcaaattgat ggaaaaatta CD 1201 atagacctag gtgggatagg agaattgata aagggaatag ggatgataga CD 1251 tgctataata ctgagaaaca gaagtggaag aatcccgtac gggtacaact CD 1301 attatttgaa cgaagtgcaa aaaatgcgat ctttgttgtc tgatggaaca CD 1351 aacactaata cTtcaatTgg gtcggtcaag atcgaatctg tttatcaaag CD 1401 tgcttctcTa attgctcaag acatatcttt tcaacTgagg aacggaacag CD 1451 gatcatttcg ttccattttt gggcaaatag ttagggatat tacattcgta CD 1501 atgcccaaaa gggtgaaggg gatccgtatt tgtTgttcag gtcgatTgaa CD 1551 aggtgcagaa atagctagaa ctgaatgcag ggagtatgga aaaacatctt CD 1601 gtaacgtatT tgaccataaa attgatTatg cttctgcgaa agtatgtact CD 1651 cgttatggaa tctcaggtgt caaagtgtgg atctcatata gtaacgaaag CD 1701 aaagggacgt gccatatccg aaacgtacaa gatatcgtaa SQ SEQUENCE 580 AA; MAREVNPISV RLNLNRSSDS SWFSDYYYGK LVYQDVNLRD YFGSIRPPTR KTFGFRLGRC IIHHFTKRTF IHLFLPRRPR RLKRRGKSRP GKGRWWAFGK VRSIGPDDGT EEERNEVRGR RRGAGKTVKS IRLDDRTGEE RNEVRIWPRK KQRYGYHDRS PSRQKNLSKW VSGWMAYKHP MSGKYAAKKR QYVNDIAFSI EDDTYVFGKT KFFKFLFPKK FRSDGPTSKR LLQTIPAVRP SFNYLVMQYF FHMKNQIHFD PIDVVVLNNL VAPGVAEPGG ADEQGGSLDK RIRSRIGFFV ESLTAKTEQG EFLAEAKKRF THLICQANDS RFARTTKTCW SILLFPFFGA TFFFLRDNLG VSNNKIDDAL PLREQLLGKF RRKLRNLLGK EKVIKLMEKL IDLGGIGELI KGIGMIDAII LRNRSGRIPY GYNYYLNEVQ KMRSLLSDGT NTNTSIGSVK IESVYQSASL IAQDISFQLR NGTGSFRSIF GQIVRDITFV MPKRVKGIRI CCSGRLKGAE IARTECREYG KTSCNVFDHK IDYASAKVCT RYGISGVKVW ISYSNERKGR AISETYKIS* // ID AY345867_3 STANDARD; PRT; 164 AA. AC AY345867; DT Tue Jul 21 07:03:33 2009 DE Cycas revoluta ribosomal protein S19 (rps19), ribosomal protein S3 OS mitochondrion Cycas revoluta OC Cycas revoluta RN [1] RL J. Mol. Evol. 60 (2), 196-206 (2005) RL PUBMED 15785848 FT Full length CDS FT GENE : rpl16 FT NOTE : truncated due to internal stop codon via RNA FT LOCUS_TAG : FT PROTEIN_ID : AAR01946.1 FT PROTEIN_NAME : truncated ribosomal protein L16 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 6887 - 7378 FT DIRECTIONS : positive FT EDITING : 13 Q(Cag) -> *(Tag) FT EDITING : 29 P(cCa) -> L(cTa) FT EDITING : 93 R(Cgg) -> W(Tgg) FT EDITING : 100 P(cCc) -> L(cTc) FT EDITING : 111 T(aCg) -> M(aTg) FT EDITING : 125 A(gCg) -> V(gTg) FT EDITING : 126 S(tcC) -> S(tcT) FT EDITING : 131 P(cCa) -> L(cTa) FT EDITING : 153 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 492 NT; CD 1 atgcttctgc gaaagtatgt actcgttatg gaatctCagg tgtcaaagtg CD 51 tggatctcat atagtaacga aagaaaggga cgtgcCatat ccgaaacgta CD 101 caagatatcg taaatatcgg aaaggcatat gtagtagggg ttgcgaaacg CD 151 gacggtacac aacttggttt tggaagatac ggcatcaaaa gctgtggagc CD 201 tggtcgtatt tcatatcgag ccattgaagc agcgcgtcgt gctataagcg CD 251 gacaatttcg aagaaatggt caaataCggg taagagtttt cgcagatcCc CD 301 cctattaccg gtaaacctac agaagtgaga aCgggaaaag gaaaagggaa CD 351 tcctacgggt tggattgctc gtgCgtcCac gggacaaatc cCatttgaaa CD 401 tggatggtgt gagtttgtca aatgctcgac aagctgctac attagcggcg CD 451 cataaacCat gttcgtcaac caagtttgtt cagtggtcgt aa FT EDITED CDNA CD 1 atgcttctgc gaaagtatgt actcgttatg gaatctTagg tgtcaaagtg CD 51 tggatctcat atagtaacga aagaaaggga cgtgcTatat ccgaaacgta CD 101 caagatatcg taaatatcgg aaaggcatat gtagtagggg ttgcgaaacg CD 151 gacggtacac aacttggttt tggaagatac ggcatcaaaa gctgtggagc CD 201 tggtcgtatt tcatatcgag ccattgaagc agcgcgtcgt gctataagcg CD 251 gacaatttcg aagaaatggt caaataTggg taagagtttt cgcagatcTc CD 301 cctattaccg gtaaacctac agaagtgaga aTgggaaaag gaaaagggaa CD 351 tcctacgggt tggattgctc gtgTgtcTac gggacaaatc cTatttgaaa CD 401 tggatggtgt gagtttgtca aatgctcgac aagctgctac attagcggcg CD 451 cataaacTat gttcgtcaac caagtttgtt cagtggtcgt aa SQ SEQUENCE 164 AA; MLLRKYVLVM ES*VSKCGSH IVTKERDVLY PKRTRYRKYR KGICSRGCET DGTQLGFGRY GIKSCGAGRI SYRAIEAARR AISGQFRRNG QIWVRVFADL PITGKPTEVR MGKGKGNPTG WIARVSTGQI LFEMDGVSLS NARQAATLAA HKLCSSTKFV QWS* // ID AY354938_1 STANDARD; PRT; 272 AA. AC AY354938; DT Tue Jul 21 07:03:34 2009 DE Huperzia lucidula NADH dehydrogenase subunit 1 (nad1) gene, partial OS mitochondrion Huperzia lucidula (shining club moss) OC Huperzia lucidula RN [1] RL Mol. Phylogenet. Evol. 32 (1), 246-263 (2004) RL PUBMED 15186811 FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR24032.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 75/1 FT INTRON 103/0 FT INTRON 167/0 FT INTRON 186/2 FT EDITING : 120 *(Taa) -> Q(Caa) FT EDITING : 162 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 816 NT; CD 1 ggttttaaat taattataaa agaacctatt ttaccaagta gtgctaattt CD 51 attcattttt tcaatggctc cagtaattac atttacgtca agtttggttg CD 101 ctcgggctgt tacacctttc gattatggta tggtattgtc agattcaaat CD 151 gtaggtatac tttatttatt tgctatttct tctctaggtg tttatggaat CD 201 tattacggcg ggttggtcta gtaattctaa atatgctttt ctaggagcat CD 251 tacgatctgc agctcaaatg gtttcttatg aagtctctat tggtcttatt CD 301 attattactg tactaatccg tgtaggttct tgcaatttca gtgagattgt CD 351 catagcaTaa aagcaaatat ggtttggcat tcccttgttt cctgtattga CD 401 ttatgttctt tatttctcgt ctagcagaaa ctaatcgggc gccgtttgat CD 451 ctaccagaag cagaagctga attagttgcg ggcTaaaatg tggaatattc CD 501 stcaatgggg tktgcttttt ttttttcagg tgagtatgct aatacgatct CD 551 taatgagtag tctatgtaca ttgctttttt tgggaggttg gctgcccatc CD 601 ctagatattc ctattctccg ggtgattccg ggctcggtct ggttcagtat CD 651 caaggttctt ctctttctgt ttgtatatat atgggtccgt gcggcatttc CD 701 cacgatatcg ttatgatcaa ttaatgagac ttggctggaa agtatttttg CD 751 cctttatcat tagcatgggt agtctttgta tctggtgttc taataacctt CD 801 tgaatggctt ccttca FT EDITED CDNA CD 1 ggttttaaat taattataaa agaacctatt ttaccaagta gtgctaattt CD 51 attcattttt tcaatggctc cagtaattac atttacgtca agtttggttg CD 101 ctcgggctgt tacacctttc gattatggta tggtattgtc agattcaaat CD 151 gtaggtatac tttatttatt tgctatttct tctctaggtg tttatggaat CD 201 tattacggcg ggttggtcta gtaattctaa atatgctttt ctaggagcat CD 251 tacgatctgc agctcaaatg gtttcttatg aagtctctat tggtcttatt CD 301 attattactg tactaatccg tgtaggttct tgcaatttca gtgagattgt CD 351 catagcaCaa aagcaaatat ggtttggcat tcccttgttt cctgtattga CD 401 ttatgttctt tatttctcgt ctagcagaaa ctaatcgggc gccgtttgat CD 451 ctaccagaag cagaagctga attagttgcg ggcCaaaatg tggaatattc CD 501 stcaatgggg tktgcttttt ttttttcagg tgagtatgct aatacgatct CD 551 taatgagtag tctatgtaca ttgctttttt tgggaggttg gctgcccatc CD 601 ctagatattc ctattctccg ggtgattccg ggctcggtct ggttcagtat CD 651 caaggttctt ctctttctgt ttgtatatat atgggtccgt gcggcatttc CD 701 cacgatatcg ttatgatcaa ttaatgagac ttggctggaa agtatttttg CD 751 cctttatcat tagcatgggt agtctttgta tctggtgttc taataacctt CD 801 tgaatggctt ccttca SQ SEQUENCE 272 AA; GFKLIIKEPI LPSSANLFIF SMAPVITFTS SLVARAVTPF DYGMVLSDSN VGILYLFAIS SLGVYGIITA GWSSNSKYAF LGALRSAAQM VSYEVSIGLI IITVLIRVGS CNFSEIVIAQ KQIWFGIPLF PVLIMFFISR LAETNRAPFD LPEAEAELVA GQNVEYXSMG XAFFFSGEYA NTILMSSLCT LLFLGGWLPI LDIPILRVIP GSVWFSIKVL LFLFVYIWVR AAFPRYRYDQ LMRLGWKVFL PLSLAWVVFV SGVLITFEWL PS // ID AY354939_1 STANDARD; PRT; 179 AA. AC AY354939; DT Tue Jul 21 07:03:34 2009 DE Isoetes sp. Qiu 96272 NADH dehydrogenase subunit 1 (nad1) gene, OS mitochondrion Isoetes sp. Qiu 96272 OC Isoetes sp. Qiu 96272 RN [1] RL Mol. Phylogenet. Evol. 32 (1), 246-263 (2004) RL PUBMED 15186811 FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR24033.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 69/0 FT EDITING : 82 *(Taa) -> Q(Caa) FT CODON_START : 3 CL CDNALEN 538 NT; CD 1 aagaacctat tttaccaagt agtgctaatt tccctcctcc tccaacggct CD 51 ctaataatta catctatgtc aggtttggtt gctcgggccg tcatatctct CD 101 tgattatggt atggcattac cagatttcaa tgtaggtaca cttcatttat CD 151 tcgccattcc ttttccaggt gtttatggaa ttattacggc gggtcggcct CD 201 agtaatccca aatacgcttt ttcaggagca ttacgatctg cggctTaaat CD 251 ggtttcttat gaagtctcca ttggtctcat tattattact gcattaatct CD 301 gtgtaggttc ttgtaatttc agtgagattg tcatcgcgca gaagcagata CD 351 tggtttggca ttcccttgtt ccctgtactg attatgttct ttatttcctg CD 401 tctagcagaa actaataggg ctccgtttga tctaccagaa gcagaagctg CD 451 aattagttgc gggctataat gtggaatatt cttccatggg gttcgctctt CD 501 ttttttctag gtgagtatgc taatatgatc ttaatgag FT EDITED CDNA CD 1 aagaacctat tttaccaagt agtgctaatt tccctcctcc tccaacggct CD 51 ctaataatta catctatgtc aggtttggtt gctcgggccg tcatatctct CD 101 tgattatggt atggcattac cagatttcaa tgtaggtaca cttcatttat CD 151 tcgccattcc ttttccaggt gtttatggaa ttattacggc gggtcggcct CD 201 agtaatccca aatacgcttt ttcaggagca ttacgatctg cggctCaaat CD 251 ggtttcttat gaagtctcca ttggtctcat tattattact gcattaatct CD 301 gtgtaggttc ttgtaatttc agtgagattg tcatcgcgca gaagcagata CD 351 tggtttggca ttcccttgtt ccctgtactg attatgttct ttatttcctg CD 401 tctagcagaa actaataggg ctccgtttga tctaccagaa gcagaagctg CD 451 aattagttgc gggctataat gtggaatatt cttccatggg gttcgctctt CD 501 ttttttctag gtgagtatgc taatatgatc ttaatgag SQ SEQUENCE 179 AA; EPILPSSANF PPPPTALIIT SMSGLVARAV ISLDYGMALP DFNVGTLHLF AIPFPGVYGI ITAGRPSNPK YAFSGALRSA AQMVSYEVSI GLIIITALIC VGSCNFSEIV IAQKQIWFGI PLFPVLIMFF ISCLAETNRA PFDLPEAEAE LVAGYNVEYS SMGFALFFLG EYANMILMX // ID AY354943S2_1 STANDARD; PRT; 153 AA. AC AY354944; DT Tue Jul 21 07:03:34 2009 DE Ophioglossum lusitanicum NADH dehydrogenase subunit 1 (nad1) gene, OS mitochondrion Ophioglossum lusitanicum OC Ophioglossum lusitanicum RN [1] RL Mol. Phylogenet. Evol. 32 (1), 246-263 (2004) RL PUBMED 15186811 FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR24065.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 23/2 FT INTRON 96/2 FT EDITING : 78 *(Tga) -> R(Cga) FT EDITING : 113 *(Taa) -> Q(Caa) FT EDITING : 115 *(Tag) -> Q(Cag) FT CODON_START : 3 CL CDNALEN 460 NT; CD 1 aagaacctat tttaccaagt agtgctaatt tctttctatt cgtaatggct CD 51 ccagtaatta catttatgtc aagtttggtt gcttgggcgg ttatcccttt CD 101 tgattatggt atggtattgt cagacctcaa tgtgggtata cttcattcat CD 151 ttgctatatc ttctccagga gcttatggga ttattatggc gggttggtct CD 201 agtaattcta aatatgcttt ttcgggagca ttaTgatccg cagctcaaac CD 251 ggtttcttat gaagtatcta ttggtcttat cattattact gtactaatct CD 301 gtgtaggttc tcgtaacttc agtgagattg tcatagcgTa aaagTagata CD 351 tggtttggca ttcccttgtt tcctgtatcg attatgtttt ccatttcttg CD 401 ctcagcagaa actaatcgag ctccgtccga tctaccagaa gcagaagctg CD 451 aatcagtcgc FT EDITED CDNA CD 1 aagaacctat tttaccaagt agtgctaatt tctttctatt cgtaatggct CD 51 ccagtaatta catttatgtc aagtttggtt gcttgggcgg ttatcccttt CD 101 tgattatggt atggtattgt cagacctcaa tgtgggtata cttcattcat CD 151 ttgctatatc ttctccagga gcttatggga ttattatggc gggttggtct CD 201 agtaattcta aatatgcttt ttcgggagca ttaCgatccg cagctcaaac CD 251 ggtttcttat gaagtatcta ttggtcttat cattattact gtactaatct CD 301 gtgtaggttc tcgtaacttc agtgagattg tcatagcgCa aaagCagata CD 351 tggtttggca ttcccttgtt tcctgtatcg attatgtttt ccatttcttg CD 401 ctcagcagaa actaatcgag ctccgtccga tctaccagaa gcagaagctg CD 451 aatcagtcgc SQ SEQUENCE 153 AA; EPILPSSANF FLFVMAPVIT FMSSLVAWAV IPFDYGMVLS DLNVGILHSF AISSPGAYGI IMAGWSSNSK YAFSGALRSA AQTVSYEVSI GLIIITVLIC VGSRNFSEIV IAQKQIWFGI PLFPVSIMFS ISCSAETNRA PSDLPEAEAE SVA // ID AY354953_1 STANDARD; PRT; 198 AA. AC AY354953; DT Tue Jul 21 07:03:34 2009 DE Adiantum sp. Qiu 95118 NADH dehydrogenase subunit 1 (nad1) gene, OS mitochondrion Adiantum sp. Qiu 95118 OC Adiantum sp. Qiu 95118 RN [1] RL Unpublished FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR24035.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 23/0 FT INTRON 68/1 FT INTRON 179/2 FT EDITING : 78 *(Tga) -> R(Cga) FT EDITING : 82 *(Taa) -> Q(Caa) FT EDITING : 113 *(Taa) -> Q(Caa) FT EDITING : 115 *(Tag) -> Q(Cag) FT CODON_START : 1 CL CDNALEN 592 NT; CD 1 gaacctattt taccgagtag tgctaatttt tttctttttg taatggctct CD 51 agtaattaca tctacgttaa gtttggttgc ttgggccgtt acaccttttg CD 101 attatggtat ggtattgttg gattcaaatg taggtatatt ccatccattt CD 151 gctatatctt ccttaggggt ttatggtatt attatagtgg gttggtctag CD 201 taattctaaa tatgctttct taggagtatt aTgatttgct gtcTaaatgg CD 251 ttttgtatga agtatctatt ggtctcatta ttattactgc actaacttgt CD 301 gcaggttcyt gcaattttag cgagattgtc gtagcgTaag agTagatatg CD 351 gttttgcatt cttttgtttc ttgtattgat tccgtttttt atctcttgcc CD 401 tagtagaaac taattgggct ctatccgatt taccagaagc agaagctgaa CD 451 tcagtcgygg gccataatgc ggaatatctc ttaatgggat ttgctccttt CD 501 tcttttagga gagtatgcta atatgatctt aatgagtagt ctgtgtacat CD 551 tacctctctt gggaggttgg caactcattt tagatcttcc gg FT EDITED CDNA CD 1 gaacctattt taccgagtag tgctaatttt tttctttttg taatggctct CD 51 agtaattaca tctacgttaa gtttggttgc ttgggccgtt acaccttttg CD 101 attatggtat ggtattgttg gattcaaatg taggtatatt ccatccattt CD 151 gctatatctt ccttaggggt ttatggtatt attatagtgg gttggtctag CD 201 taattctaaa tatgctttct taggagtatt aCgatttgct gtcCaaatgg CD 251 ttttgtatga agtatctatt ggtctcatta ttattactgc actaacttgt CD 301 gcaggttcyt gcaattttag cgagattgtc gtagcgCaag agCagatatg CD 351 gttttgcatt cttttgtttc ttgtattgat tccgtttttt atctcttgcc CD 401 tagtagaaac taattgggct ctatccgatt taccagaagc agaagctgaa CD 451 tcagtcgygg gccataatgc ggaatatctc ttaatgggat ttgctccttt CD 501 tcttttagga gagtatgcta atatgatctt aatgagtagt ctgtgtacat CD 551 tacctctctt gggaggttgg caactcattt tagatcttcc gg SQ SEQUENCE 198 AA; EPILPSSANF FLFVMALVIT STLSLVAWAV TPFDYGMVLL DSNVGIFHPF AISSLGVYGI IIVGWSSNSK YAFLGVLRFA VQMVLYEVSI GLIIITALTC AGXCNFSEIV VAQEQIWFCI LLFLVLIPFF ISCLVETNWA LSDLPEAEAE SVXGHNAEYL LMGFAPFLLG EYANMILMSS LCTLPLLGGW QLILDLPX // ID AY354954_1 STANDARD; PRT; 230 AA. AC AY354954; DT Tue Jul 21 07:03:34 2009 DE Asplenium nidus NADH dehydrogenase subunit 1 (nad1) gene, partial OS mitochondrion Asplenium nidus (bird's-nest fern) OC Asplenium nidus RN [1] RL Mol. Phylogenet. Evol. 32 (1), 246-263 (2004) RL PUBMED 15186811 FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR24036.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 23/2 FT INTRON 69/0 FT INTRON 180/1 FT EDITING : 78 *(Tga) -> R(Cga) FT EDITING : 82 *(Taa) -> Q(Caa) FT EDITING : 113 *(Taa) -> Q(Caa) FT EDITING : 115 *(Tag) -> Q(Cag) FT CODON_START : 3 CL CDNALEN 691 NT; CD 1 aagaacctat tttaccaagt agtgctaatt tctttctttc tgtaatggct CD 51 ctggtaatta catttacgtt aagtttggtt gctcgggctg ttacaccttc CD 101 cgattatggt atggtattgt cggatccaaa tgtaggtata ttctatccat CD 151 ttgctatatc ttctccaggg gtttatggta ttattatagc gggtcggtct CD 201 agtaattcca aatatgcttt ttcaggagta tcaTgatttg ctgtcTaaat CD 251 ggttttgtac gaagtatcta ttggtcccat catcattact gcatcaaccc CD 301 gtgcaggttc ttgcaatttc agcgagattg tcatagcgTa agagTagata CD 351 tggttccgca ttctcttgtt cctcgtattg attttgtttt tcatctcccg CD 401 cctagcagaa actaatcggg ctctgtctga tcyaccagaa gcagargctg CD 451 aattrgtcgc gggccataat gcggaatatc ttctaatggg atttgctctt CD 501 tttctttcag gagagtatgc taatatgatc ttaatgagta gtctgtgtac CD 551 accgcctctc ccgggaggtt ggccacccat tttagatctt cccagtttcc CD 601 ggggaacccc aggctcaatc tggtttggta taaaggttat tttatttccg CD 651 tttgtatata tatgggtttg cgcagcattt cctcgatatc g FT EDITED CDNA CD 1 aagaacctat tttaccaagt agtgctaatt tctttctttc tgtaatggct CD 51 ctggtaatta catttacgtt aagtttggtt gctcgggctg ttacaccttc CD 101 cgattatggt atggtattgt cggatccaaa tgtaggtata ttctatccat CD 151 ttgctatatc ttctccaggg gtttatggta ttattatagc gggtcggtct CD 201 agtaattcca aatatgcttt ttcaggagta tcaCgatttg ctgtcCaaat CD 251 ggttttgtac gaagtatcta ttggtcccat catcattact gcatcaaccc CD 301 gtgcaggttc ttgcaatttc agcgagattg tcatagcgCa agagCagata CD 351 tggttccgca ttctcttgtt cctcgtattg attttgtttt tcatctcccg CD 401 cctagcagaa actaatcggg ctctgtctga tcyaccagaa gcagargctg CD 451 aattrgtcgc gggccataat gcggaatatc ttctaatggg atttgctctt CD 501 tttctttcag gagagtatgc taatatgatc ttaatgagta gtctgtgtac CD 551 accgcctctc ccgggaggtt ggccacccat tttagatctt cccagtttcc CD 601 ggggaacccc aggctcaatc tggtttggta taaaggttat tttatttccg CD 651 tttgtatata tatgggtttg cgcagcattt cctcgatatc g SQ SEQUENCE 230 AA; EPILPSSANF FLSVMALVIT FTLSLVARAV TPSDYGMVLS DPNVGIFYPF AISSPGVYGI IIAGRSSNSK YAFSGVSRFA VQMVLYEVSI GPIIITASTR AGSCNFSEIV IAQEQIWFRI LLFLVLILFF ISRLAETNRA LSDXPEAXAE XVAGHNAEYL LMGFALFLSG EYANMILMSS LCTPPLPGGW PPILDLPSFR GTPGSIWFGI KVILFPFVYI WVCAAFPRYR // ID AY354966_1 STANDARD; PRT; 285 AA. AC AY354966; DT Tue Jul 21 07:03:34 2009 DE Polytrichum juniperinum NADH dehydrogenase subunit 1 (nad1) gene, OS mitochondrion Polytrichum juniperinum OC Polytrichum juniperinum RN [1] RL Unpublished FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR24048.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 62/0 FT INTRON 209/0 FT EDITING : 229 *(Tag) -> Q(Cag) FT EDITING : 271 *(Tag) -> Q(Cag) FT EDITING : 272 Y(taT) -> Y(taC) FT CODON_START : 2 CL CDNALEN 855 NT; CD 1 ctctatgcaa cgtagaaagg gtcctaatgc agtgggattg ttcggattgt CD 51 tacaaccttt agcagatggt ttgaaattaa tgataaaaga acctatttta CD 101 ccaagtagtg ctaatttatt tatttttata atggctccag taattacatt CD 151 tatgttaagt ttggttgctt gggctgttat accttttgat tatggtatgg CD 201 tattgtcgga tctaaatgta ggtatacttt atctatttgc tatatcttct CD 251 ctaggtgttt acgggattat tacagcgggc tggtctagta attctaaata CD 301 tgctttttta ggagcattac gatctgcagc tcaaatggtt tcttatgaag CD 351 tttctatcgg tcttattatt attactgtac taattcgtgt aggttcctgt CD 401 aattttagtg agattgtaat agcgcaaaag cagatatggt ttggcattcc CD 451 tttgtttcct gtatttatta tgtttttcat ttcttgttca gcagaaacta CD 501 atcgagctcc ttttgattta ccagaagcag aagctgaatt agtcgcgggc CD 551 tataatgtag aatattcttc gatgggtttt gctctttttt tcttagggga CD 601 atatgctaat atgatcttaa tgagccgtat gacgcgagag tgtcacgtac CD 651 ggttctttga gaagggagtg gatatctatt attctTaggc tcgagcgggc CD 701 tacggagctg cacctttact ctcccagtct atgtacattg ctctttttag CD 751 gaggttggtt gcccatctta gatattccta tttttcatgt gattccgggt CD 801 tctatctggt tTagtaTtaa ggttcttttc tttttgtttg tctatatatg CD 851 ggtcc FT EDITED CDNA CD 1 ctctatgcaa cgtagaaagg gtcctaatgc agtgggattg ttcggattgt CD 51 tacaaccttt agcagatggt ttgaaattaa tgataaaaga acctatttta CD 101 ccaagtagtg ctaatttatt tatttttata atggctccag taattacatt CD 151 tatgttaagt ttggttgctt gggctgttat accttttgat tatggtatgg CD 201 tattgtcgga tctaaatgta ggtatacttt atctatttgc tatatcttct CD 251 ctaggtgttt acgggattat tacagcgggc tggtctagta attctaaata CD 301 tgctttttta ggagcattac gatctgcagc tcaaatggtt tcttatgaag CD 351 tttctatcgg tcttattatt attactgtac taattcgtgt aggttcctgt CD 401 aattttagtg agattgtaat agcgcaaaag cagatatggt ttggcattcc CD 451 tttgtttcct gtatttatta tgtttttcat ttcttgttca gcagaaacta CD 501 atcgagctcc ttttgattta ccagaagcag aagctgaatt agtcgcgggc CD 551 tataatgtag aatattcttc gatgggtttt gctctttttt tcttagggga CD 601 atatgctaat atgatcttaa tgagccgtat gacgcgagag tgtcacgtac CD 651 ggttctttga gaagggagtg gatatctatt attctCaggc tcgagcgggc CD 701 tacggagctg cacctttact ctcccagtct atgtacattg ctctttttag CD 751 gaggttggtt gcccatctta gatattccta tttttcatgt gattccgggt CD 801 tctatctggt tCagtaCtaa ggttcttttc tttttgtttg tctatatatg CD 851 ggtcc SQ SEQUENCE 285 AA; SMQRRKGPNA VGLFGLLQPL ADGLKLMIKE PILPSSANLF IFIMAPVITF MLSLVAWAVI PFDYGMVLSD LNVGILYLFA ISSLGVYGII TAGWSSNSKY AFLGALRSAA QMVSYEVSIG LIIITVLIRV GSCNFSEIVI AQKQIWFGIP LFPVFIMFFI SCSAETNRAP FDLPEAEAEL VAGYNVEYSS MGFALFFLGE YANMILMSRM TRECHVRFFE KGVDIYYSQA RAGYGAAPLL SQSMYIALFR RLVAHLRYSY FSCDSGFYLV QY*GSFLFVC LYMGP // ID AY354978_1 STANDARD; PRT; 218 AA. AC AY354978; DT Tue Jul 21 07:03:34 2009 DE Anthoceros agrestis NADH dehydrogenase subunit 1 (nad1) gene, OS mitochondrion Anthoceros agrestis OC Anthoceros agrestis RN [1] RL Mol. Phylogenet. Evol. 32 (1), 246-263 (2004) RL PUBMED 15186811 FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR24060.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 46/0 FT INTRON 66/1 FT INTRON 193/0 FT EDITING : 91 *(Tga) -> R(Cga) FT EDITING : 95 *(Taa) -> Q(Caa) FT EDITING : 126 *(Taa) -> Q(Caa) FT EDITING : 128 *(Tag) -> Q(Cag) FT CODON_START : 2 CL CDNALEN 655 NT; CD 1 gttacaacct tttgcagacg gtttgaaact aatgataaaa gaacctattc CD 51 catcgagtag tgctaattca tttatttcta taatggcttt agtaattaca CD 101 ttcatgttaa gtttggttgc ttgggctgtt ataccttttg attatggtat CD 151 ggtattgtca gattcaaatg taggtatacc tcatctattc gctacatctt CD 201 ccctaggtgt ttatgggatt attatggtgg gtcgggttag taatcttaaa CD 251 catgtgtctt caggagtatt aTgattcgca gctTaaatgg ttctttatga CD 301 agtttctatt ggtcccatca ttattactgt attaatccgt gtaggttctc CD 351 gcaattttag cgagattgtc atggcgTaaa agTagatatg gttcggcatt CD 401 cctttgtttc ctgtatcgat tatgtttttc atttttcgtc caacagaaac CD 451 taatcgagct ccttccgatc caccagaagc agaagcggaa tcagtcgcgg CD 501 gctataatgt agaatatttt ctaatggggt ttgctcctcc ttcttcaggg CD 551 gagtatgcta atatgatttt aatgagcagt ctatgtacat tgcttttttt CD 601 aggaggttgg ctgcctatcc tagatcttcc tattttccag gtgattccgg CD 651 gctcg FT EDITED CDNA CD 1 gttacaacct tttgcagacg gtttgaaact aatgataaaa gaacctattc CD 51 catcgagtag tgctaattca tttatttcta taatggcttt agtaattaca CD 101 ttcatgttaa gtttggttgc ttgggctgtt ataccttttg attatggtat CD 151 ggtattgtca gattcaaatg taggtatacc tcatctattc gctacatctt CD 201 ccctaggtgt ttatgggatt attatggtgg gtcgggttag taatcttaaa CD 251 catgtgtctt caggagtatt aCgattcgca gctCaaatgg ttctttatga CD 301 agtttctatt ggtcccatca ttattactgt attaatccgt gtaggttctc CD 351 gcaattttag cgagattgtc atggcgCaaa agCagatatg gttcggcatt CD 401 cctttgtttc ctgtatcgat tatgtttttc atttttcgtc caacagaaac CD 451 taatcgagct ccttccgatc caccagaagc agaagcggaa tcagtcgcgg CD 501 gctataatgt agaatatttt ctaatggggt ttgctcctcc ttcttcaggg CD 551 gagtatgcta atatgatttt aatgagcagt ctatgtacat tgcttttttt CD 601 aggaggttgg ctgcctatcc tagatcttcc tattttccag gtgattccgg CD 651 gctcg SQ SEQUENCE 218 AA; LQPFADGLKL MIKEPIPSSS ANSFISIMAL VITFMLSLVA WAVIPFDYGM VLSDSNVGIP HLFATSSLGV YGIIMVGRVS NLKHVSSGVL RFAAQMVLYE VSIGPIIITV LIRVGSRNFS EIVMAQKQIW FGIPLFPVSI MFFIFRPTET NRAPSDPPEA EAESVAGYNV EYFLMGFAPP SSGEYANMIL MSSLCTLLFL GGWLPILDLP IFQVIPGS // ID AY354979_1 STANDARD; PRT; 184 AA. AC AY354979; DT Tue Jul 21 07:03:34 2009 DE Megaceros tosanus NADH dehydrogenase subunit 1 (nad1) gene, partial OS mitochondrion Megaceros tosanus OC Megaceros tosanus RN [1] RL Mol. Phylogenet. Evol. 32 (1), 246-263 (2004) RL PUBMED 15186811 FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR24061.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 7/0 FT INTRON 133/2 FT EDITING : 32 *(Tga) -> R(Cga) FT EDITING : 36 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 551 NT; CD 1 cttcatctat tcgctatatc ctctccaggt gtttatggga ttattacggt CD 51 gggtcgggtt agtaatccaa aatatgcgtc ttcaggagca ttaTgatctg CD 101 cagctTaaac ggttttttat gaagtttcta ttggtcccat tattattact CD 151 gtatcaatcc gtgtaggtcc tcgtaatctt agtgagattg tcatggcgca CD 201 aaagcagata tggttcggca ttcccttgtt tcctgtattg attatgtttt CD 251 tcatttctcg tctagcagaa actaataggg ctttttctga tctaccagaa CD 301 gcagaagcgg aatcagtcgc gggctataat gtagaatatc ctctaatggg CD 351 gtttgctccc ctttccntag gagagtatgc taatatgatt ttaatgagta CD 401 gtctatgtac attgccctct ttaggaggtt ggccgcctat ctcagatttt CD 451 cctattttcg aggcgatttc gggctctatt tggttcagta tcaaggttct CD 501 tttctttccg cccatacata tacgggtccg tgcagcattt ccacgatatc CD 551 g FT EDITED CDNA CD 1 cttcatctat tcgctatatc ctctccaggt gtttatggga ttattacggt CD 51 gggtcgggtt agtaatccaa aatatgcgtc ttcaggagca ttaCgatctg CD 101 cagctCaaac ggttttttat gaagtttcta ttggtcccat tattattact CD 151 gtatcaatcc gtgtaggtcc tcgtaatctt agtgagattg tcatggcgca CD 201 aaagcagata tggttcggca ttcccttgtt tcctgtattg attatgtttt CD 251 tcatttctcg tctagcagaa actaataggg ctttttctga tctaccagaa CD 301 gcagaagcgg aatcagtcgc gggctataat gtagaatatc ctctaatggg CD 351 gtttgctccc ctttccntag gagagtatgc taatatgatt ttaatgagta CD 401 gtctatgtac attgccctct ttaggaggtt ggccgcctat ctcagatttt CD 451 cctattttcg aggcgatttc gggctctatt tggttcagta tcaaggttct CD 501 tttctttccg cccatacata tacgggtccg tgcagcattt ccacgatatc CD 551 g SQ SEQUENCE 184 AA; LHLFAISSPG VYGIITVGRV SNPKYASSGA LRSAAQTVFY EVSIGPIIIT VSIRVGPRNL SEIVMAQKQI WFGIPLFPVL IMFFISRLAE TNRAFSDLPE AEAESVAGYN VEYPLMGFAP LSXGEYANMI LMSSLCTLPS LGGWPPISDF PIFEAISGSI WFSIKVLFFP PIHIRVRAAF PRYR // ID AY354980_1 STANDARD; PRT; 243 AA. AC AY354980; DT Tue Jul 21 07:03:34 2009 DE Phaeoceros carolinianus NADH dehydrogenase subunit 1 (nad1) gene, OS mitochondrion Phaeoceros carolinianus OC Phaeoceros carolinianus RN [1] RL Mol. Phylogenet. Evol. 32 (1), 246-263 (2004) RL PUBMED 15186811 FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR24062.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 46/0 FT INTRON 66/1 FT INTRON 193/0 FT EDITING : 91 *(Tga) -> R(Cga) FT EDITING : 95 *(Taa) -> Q(Caa) FT EDITING : 126 *(Taa) -> Q(Caa) FT EDITING : 128 *(Tag) -> Q(Cag) FT CODON_START : 2 CL CDNALEN 729 NT; CD 1 gttacaacct ttggctgatg gtttgaaatt aatgataaaa gaacttattc CD 51 tactgagtag tgctaattta tttatttcta taatggcttc agtaattaca CD 101 tttatgtcaa gttcggttgc ttgggctgtt atactttttg attatggtat CD 151 ggtattgtca gattcaaatg taggtatacc tcatctattc gctatatcct CD 201 ctctaggtgt ttatgggatt attacggtgg gtcgggttag taatctaaaa CD 251 tatgtgtctt caggagcatc aTgatttgca gttTaaacgg ttctttatga CD 301 agtttctatt ggtcccatta ttattactgt attaatctgt gtaggttctc CD 351 gtaattttag tgagattgtc atagcgTaaa agTagatatg gttcggcatt CD 401 cctttgtttc cagtattgat tatgtttttc atttcttgtc tagcagaaat CD 451 taatagggct ttttttgatc cactagaagt agaagcggaa tcagtcgcgg CD 501 gctataatgt agaatatttt ttaatggggt ttgctcctct ctctttagga CD 551 gagtatgcta atatgatttt aatgagtagt ctatgtacat tgctccttct CD 601 agggggttgg ccgcctatct cagatttccc tattttcgag gggatttcgg CD 651 gctctatttg gttcagtatc aaggttcctt tcttttcgtt catacatata CD 701 cgggtctgtg cagcatttcc tcgatatct FT EDITED CDNA CD 1 gttacaacct ttggctgatg gtttgaaatt aatgataaaa gaacttattc CD 51 tactgagtag tgctaattta tttatttcta taatggcttc agtaattaca CD 101 tttatgtcaa gttcggttgc ttgggctgtt atactttttg attatggtat CD 151 ggtattgtca gattcaaatg taggtatacc tcatctattc gctatatcct CD 201 ctctaggtgt ttatgggatt attacggtgg gtcgggttag taatctaaaa CD 251 tatgtgtctt caggagcatc aCgatttgca gttCaaacgg ttctttatga CD 301 agtttctatt ggtcccatta ttattactgt attaatctgt gtaggttctc CD 351 gtaattttag tgagattgtc atagcgCaaa agCagatatg gttcggcatt CD 401 cctttgtttc cagtattgat tatgtttttc atttcttgtc tagcagaaat CD 451 taatagggct ttttttgatc cactagaagt agaagcggaa tcagtcgcgg CD 501 gctataatgt agaatatttt ttaatggggt ttgctcctct ctctttagga CD 551 gagtatgcta atatgatttt aatgagtagt ctatgtacat tgctccttct CD 601 agggggttgg ccgcctatct cagatttccc tattttcgag gggatttcgg CD 651 gctctatttg gttcagtatc aaggttcctt tcttttcgtt catacatata CD 701 cgggtctgtg cagcatttcc tcgatatct SQ SEQUENCE 243 AA; LQPLADGLKL MIKELILLSS ANLFISIMAS VITFMSSSVA WAVILFDYGM VLSDSNVGIP HLFAISSLGV YGIITVGRVS NLKYVSSGAS RFAVQTVLYE VSIGPIIITV LICVGSRNFS EIVIAQKQIW FGIPLFPVLI MFFISCLAEI NRAFFDPLEV EAESVAGYNV EYFLMGFAPL SLGEYANMIL MSSLCTLLLL GGWPPISDFP IFEGISGSIW FSIKVPFFSF IHIRVCAAFP RYL // ID AY354981_1 STANDARD; PRT; 179 AA. AC AY354981; DT Tue Jul 21 07:03:34 2009 DE Notothylas breutelii NADH dehydrogenase subunit 1 (nad1) gene, OS mitochondrion Notothylas breutelii OC Notothylas breutelii RN [1] RL Mol. Phylogenet. Evol. 32 (1), 246-263 (2004) RL PUBMED 15186811 FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR24063.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 32/2 FT INTRON 53/0 FT EDITING : 78 *(Tga) -> R(Cga) FT EDITING : 82 *(Taa) -> Q(Caa) FT EDITING : 113 *(Taa) -> Q(Caa) FT EDITING : 115 *(Tag) -> Q(Cag) FT CODON_START : 1 CL CDNALEN 536 NT; CD 1 gaacctattt taccaagtag tgctaattta tttatttcta taatggttcc CD 51 agtaattaca tttatgtcaa gttcggttgc ttgggctgtt atatcttttg CD 101 attatggtat ggtattgtca gattcaaatg taggtatact tcatctattc CD 151 gctatatcct ctctaggtgt ttatgggatt attacggtgg gtcgggttag CD 201 taatctaaaa catgcgtctt caggagcatc aTgatctgca gctTaaacgg CD 251 ttctttatga agttcctatt ggtcccatta ttattactgt actaatctgt CD 301 gtaggttctc gtaatcctag tgagattgtc atagcgTaaa agTagatatg CD 351 gttcggcatt cctttgtttc cagtattgat tatgtttttc atttcccgtc CD 401 tagcagaaac taacagggct tttcctgatc caccagaagt agaagcggaa CD 451 tcagtcgcgg gctataatgt agaatattct ttaatggggt ttgctctctc CD 501 ccctctagga gagtatgcta atatgatttt aatgag FT EDITED CDNA CD 1 gaacctattt taccaagtag tgctaattta tttatttcta taatggttcc CD 51 agtaattaca tttatgtcaa gttcggttgc ttgggctgtt atatcttttg CD 101 attatggtat ggtattgtca gattcaaatg taggtatact tcatctattc CD 151 gctatatcct ctctaggtgt ttatgggatt attacggtgg gtcgggttag CD 201 taatctaaaa catgcgtctt caggagcatc aCgatctgca gctCaaacgg CD 251 ttctttatga agttcctatt ggtcccatta ttattactgt actaatctgt CD 301 gtaggttctc gtaatcctag tgagattgtc atagcgCaaa agCagatatg CD 351 gttcggcatt cctttgtttc cagtattgat tatgtttttc atttcccgtc CD 401 tagcagaaac taacagggct tttcctgatc caccagaagt agaagcggaa CD 451 tcagtcgcgg gctataatgt agaatattct ttaatggggt ttgctctctc CD 501 ccctctagga gagtatgcta atatgatttt aatgag SQ SEQUENCE 179 AA; EPILPSSANL FISIMVPVIT FMSSSVAWAV ISFDYGMVLS DSNVGILHLF AISSLGVYGI ITVGRVSNLK HASSGASRSA AQTVLYEVPI GPIIITVLIC VGSRNPSEIV IAQKQIWFGI PLFPVLIMFF ISRLAETNRA FPDPPEVEAE SVAGYNVEYS LMGFALSPLG EYANMILMX // ID AY442177_1 STANDARD; PRT; 279 AA. AC AY442177; DT Tue Jul 21 07:03:36 2009 DE Pisum sativum ATPase subunit 6 (atp6) gene, complete cds; OS mitochondrion Pisum sativum (pea) OC Pisum sativum RN [1] RL Curr. Genet. 46 (4), 235-239 (2004) FT Full length CDS FT GENE : atp6 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR16718.2 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 399 - 1235 FT DIRECTIONS : positive FT EDITING : 52 P(CcC) -> S(TcT) FT EDITING : 78 S(tCa) -> L(tTa) FT EDITING : 95 P(cCg) -> L(cTg) FT EDITING : 222 F(ttC) -> F(ttT) FT EDITING : 251 P(cCg) -> L(cTg) FT EDITING : 258 S(tCa) -> L(tTa) FT EDITING : 261 H(Cat) -> Y(Tat) FT EDITING : 263 S(tCt) -> F(tTt) FT EDITING : 266 S(tCa) -> L(tTa) FT EDITING : 275 T(aCa) -> I(aTa) FT EDITING : 279 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 837 NT; CD 1 atgaacttgt acttccagtt agacttatac ttatacaacg acaacttata CD 51 cttatactta gagtcggggg tggttcccag cccacttgaa caatttgaga CD 101 taatcccttt tcttcctatg aagataggtg acttgtattt ctcattcaca CD 151 aatCcCtctt tgtttatgct gctcactctc agtttggtct tactgctggt CD 201 tcattttgtt actaaaaagg gaggaggaaa gtCagtaccc aatgcttggc CD 251 aatccttggt agagcttatt tatgatttcg tgcCgaacct ggtaaacgaa CD 301 caaataggtg gtctttccgg aaatgtgaaa caacagtttt tcccttgcat CD 351 ctttgtcact tttacttttt tgttattttg taatcttcag ggtatgatac CD 401 cttatagctt cacagttaca agtcattttc tcattacttt gggtctctca CD 451 ttttctattt ttattggcat tactatagtg ggatttcaaa gaaatgggct CD 501 tcatttttta agcttcttat tacccgcagg agtcccactg ccgttagcgc CD 551 cttttttagt actccttgag ctaatctctt attgttttcg cgcattaagc CD 601 ttaggaatac gtttatttgc taatatgatg gccggtcata gtttagtaaa CD 651 gattttaagt gggttCgctt ggactatgct atgtatgaat gatcttttat CD 701 atttcatagg agatcttggt cctttattta tagttcttgc attaaccggt CD 751 cCggaattag gtgtagctat atCacaagct CatgtttCta cgatctCaat CD 801 ctgtatttac ttgaatgatg ctaCaaatct ccatCaa FT EDITED CDNA CD 1 atgaacttgt acttccagtt agacttatac ttatacaacg acaacttata CD 51 cttatactta gagtcggggg tggttcccag cccacttgaa caatttgaga CD 101 taatcccttt tcttcctatg aagataggtg acttgtattt ctcattcaca CD 151 aatTcTtctt tgtttatgct gctcactctc agtttggtct tactgctggt CD 201 tcattttgtt actaaaaagg gaggaggaaa gtTagtaccc aatgcttggc CD 251 aatccttggt agagcttatt tatgatttcg tgcTgaacct ggtaaacgaa CD 301 caaataggtg gtctttccgg aaatgtgaaa caacagtttt tcccttgcat CD 351 ctttgtcact tttacttttt tgttattttg taatcttcag ggtatgatac CD 401 cttatagctt cacagttaca agtcattttc tcattacttt gggtctctca CD 451 ttttctattt ttattggcat tactatagtg ggatttcaaa gaaatgggct CD 501 tcatttttta agcttcttat tacccgcagg agtcccactg ccgttagcgc CD 551 cttttttagt actccttgag ctaatctctt attgttttcg cgcattaagc CD 601 ttaggaatac gtttatttgc taatatgatg gccggtcata gtttagtaaa CD 651 gattttaagt gggttTgctt ggactatgct atgtatgaat gatcttttat CD 701 atttcatagg agatcttggt cctttattta tagttcttgc attaaccggt CD 751 cTggaattag gtgtagctat atTacaagct TatgtttTta cgatctTaat CD 801 ctgtatttac ttgaatgatg ctaTaaatct ccatTaa SQ SEQUENCE 279 AA; MNLYFQLDLY LYNDNLYLYL ESGVVPSPLE QFEIIPFLPM KIGDLYFSFT NSSLFMLLTL SLVLLLVHFV TKKGGGKLVP NAWQSLVELI YDFVLNLVNE QIGGLSGNVK QQFFPCIFVT FTFLLFCNLQ GMIPYSFTVT SHFLITLGLS FSIFIGITIV GFQRNGLHFL SFLLPAGVPL PLAPFLVLLE LISYCFRALS LGIRLFANMM AGHSLVKILS GFAWTMLCMN DLLYFIGDLG PLFIVLALTG LELGVAILQA YVFTILICIY LNDAINLH* // ID AY506529_49 STANDARD; PRT; 220 AA. AC AY506529; DT Tue Jul 21 07:03:37 2009 DE Zea mays strain NB mitochondrion, complete genome. OS mitochondrion Zea mays OC Zea mays RN [1] RL Plant Physiol. 136 (3), 3486-3503 (2004) RL PUBMED 15542500 FT Full length CDS FT GENE : atp4 FT NOTE : orf25 FT LOCUS_TAG : FT PROTEIN_ID : AAR91067.1 FT PROTEIN_NAME : ATPase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 138553 - 139212 FT DIRECTIONS : negative FT EDITING : 14 L(Cta) -> L(Tta) FT EDITING : 19 P(cCa) -> L(cTa) FT EDITING : 20 S(tCt) -> F(tTt) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 26 P(Ccg) -> S(Tcg) FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 40 R(Cgt) -> C(Tgt) FT EDITING : 110 S(tCa) -> L(tTa) FT EDITING : 120 C(tgC) -> C(tgT) FT EDITING : 136 S(tCa) -> L(tTa) FT EDITING : 143 T(aCt) -> I(aTt) FT EDITING : 177 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 660 NT; CD 1 atgagattta gtggaatgga tatgaagggt ataaatatgC tatttgctgc CD 51 tattcCatCt atttgtgcat CaagtCcgaa gaagatctCa atctataatg CD 101 aagaaatgat agtagctCgt tgttttatag gctttctcat attaagtcgg CD 151 aagagtttag gtaagacttt caaagaaact ctcgacggga gaatcgagtc CD 201 tattcaggaa tcattgcagc aattcttcaa tcctaacgaa gtcattctgg CD 251 aggaatccaa tgaacaacaa cgattactta atctacggat cagcttgcga CD 301 atttgcagca ccgtaaaagt agtagaatCa ttaccagcgg cacgctgtgc CD 351 gcctaagtgC gaaaagacag tgcaagcttt gttatgccga aacctaaatg CD 401 tcaagtCagc aacacttcta aatgccaCtt cttcccgtcg catccgtctt CD 451 caggacgata tagtcacagg ttttcacttt tcagtgagtg aaagattagt CD 501 atccgggtct acaactttgg tagaagcttC taccgtagaa caaattcgag CD 551 aggccttctt attagaaccc agagacctaa ttcgagaagg ctttatagtc CD 601 ctcagaaagg tgagggtggg gggtatcccc gggacctgtg gagacggggt CD 651 gggcctgtag FT EDITED CDNA CD 1 atgagattta gtggaatgga tatgaagggt ataaatatgT tatttgctgc CD 51 tattcTatTt atttgtgcat TaagtTcgaa gaagatctTa atctataatg CD 101 aagaaatgat agtagctTgt tgttttatag gctttctcat attaagtcgg CD 151 aagagtttag gtaagacttt caaagaaact ctcgacggga gaatcgagtc CD 201 tattcaggaa tcattgcagc aattcttcaa tcctaacgaa gtcattctgg CD 251 aggaatccaa tgaacaacaa cgattactta atctacggat cagcttgcga CD 301 atttgcagca ccgtaaaagt agtagaatTa ttaccagcgg cacgctgtgc CD 351 gcctaagtgT gaaaagacag tgcaagcttt gttatgccga aacctaaatg CD 401 tcaagtTagc aacacttcta aatgccaTtt cttcccgtcg catccgtctt CD 451 caggacgata tagtcacagg ttttcacttt tcagtgagtg aaagattagt CD 501 atccgggtct acaactttgg tagaagcttT taccgtagaa caaattcgag CD 551 aggccttctt attagaaccc agagacctaa ttcgagaagg ctttatagtc CD 601 ctcagaaagg tgagggtggg gggtatcccc gggacctgtg gagacggggt CD 651 gggcctgtag SQ SEQUENCE 220 AA; MRFSGMDMKG INMLFAAILF ICALSSKKIL IYNEEMIVAC CFIGFLILSR KSLGKTFKET LDGRIESIQE SLQQFFNPNE VILEESNEQQ RLLNLRISLR ICSTVKVVEL LPAARCAPKC EKTVQALLCR NLNVKLATLL NAISSRRIRL QDDIVTGFHF SVSERLVSGS TTLVEAFTVE QIREAFLLEP RDLIREGFIV LRKVRVGGIP GTCGDGVGL* // ID AY506529_89 STANDARD; PRT; 126 AA. AC AY506529; DT Tue Jul 21 07:03:37 2009 DE Zea mays strain NB mitochondrion, complete genome. OS mitochondrion Zea mays OC Zea mays RN [1] RL Plant Physiol. 136 (3), 3486-3503 (2004) RL PUBMED 15542500 FT Full length CDS FT GENE : rps12 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR91117.1 FT PROTEIN_NAME : ribosomal protein S12 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 262384 - 262761 FT DIRECTIONS : negative FT EDITING : 24 S(tCg) -> L(tTg) FT EDITING : 66 H(Cac) -> Y(Tac) FT EDITING : 74 S(tCg) -> L(tTg) FT EDITING : 90 S(tCg) -> L(tTg) FT EDITING : 95 S(tCc) -> F(tTc) FT EDITING : 97 R(Cgt) -> C(Tgt) FT CODON_START : 1 CL CDNALEN 378 NT; CD 1 atgcctacaa aaaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt Cggatcaatg tccccagaag caaggagtat CD 101 gcctgcgtgt ttcgacgaga acaccgaaaa aacctaattc agctctacgt CD 151 aagatagcaa aagtacggtt gagcaatcga catgatatat ttgctCacat CD 201 tccaggcgaa ggtcataatt Cgcaggaaca ttctatagtc ttagtcagag CD 251 ggggtagagt gaaagattCg ccaggtgtga aatCccatCg tattcgagga CD 301 gtaaaggatt tgctgggaat tccggatcgt agaaagggaa gatctaaata CD 351 tggcgcagaa agaccaaaat ctaaatga FT EDITED CDNA CD 1 atgcctacaa aaaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt Tggatcaatg tccccagaag caaggagtat CD 101 gcctgcgtgt ttcgacgaga acaccgaaaa aacctaattc agctctacgt CD 151 aagatagcaa aagtacggtt gagcaatcga catgatatat ttgctTacat CD 201 tccaggcgaa ggtcataatt Tgcaggaaca ttctatagtc ttagtcagag CD 251 ggggtagagt gaaagattTg ccaggtgtga aatTccatTg tattcgagga CD 301 gtaaaggatt tgctgggaat tccggatcgt agaaagggaa gatctaaata CD 351 tggcgcagaa agaccaaaat ctaaatga SQ SEQUENCE 126 AA; MPTKNQLIRH GREEKRRTDR TRALDQCPQK QGVCLRVSTR TPKKPNSALR KIAKVRLSNR HDIFAYIPGE GHNLQEHSIV LVRGGRVKDL PGVKFHCIRG VKDLLGIPDR RKGRSKYGAE RPKSK* // ID AY506529_90 STANDARD; PRT; 119 AA. AC AY506529; DT Tue Jul 21 07:03:37 2009 DE Zea mays strain NB mitochondrion, complete genome. OS mitochondrion Zea mays OC Zea mays RN [1] RL Plant Physiol. 136 (3), 3486-3503 (2004) RL PUBMED 15542500 FT Full length CDS FT GENE : nad3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR91127.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 262806 - 263162 FT DIRECTIONS : negative FT EDITING : 2 S(tCg) -> L(tTg) FT EDITING : 9 I(atC) -> I(atT) FT EDITING : 15 P(cCg) -> L(cTg) FT EDITING : 21 P(CCa) -> L(TTa) FT EDITING : 27 P(CCa) -> L(TTa) FT EDITING : 46 S(tCc) -> F(tTc) FT EDITING : 49 S(tCc) -> F(tTc) FT EDITING : 62 P(cCg) -> L(cTg) FT EDITING : 64 P(Cct) -> S(Tct) FT EDITING : 70 P(CCt) -> F(TTt) FT EDITING : 72 P(cCg) -> L(cTg) FT EDITING : 77 S(tCt) -> F(tTt) FT EDITING : 83 P(Cct) -> S(Tct) FT EDITING : 84 P(cCt) -> L(cTt) FT EDITING : 89 L(Ctg) -> L(Ttg) FT EDITING : 92 S(tCt) -> F(tTt) FT EDITING : 103 T(aCg) -> M(aTg) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 117 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 atgtCggaat ttgcacctat ttgtatCtat ttagtgatca gtcCgctagt CD 51 ttctttgatt CCactcggtg ttccttttCC atttgcttcc aatagttcga CD 101 cctatccaga aaaattgtcg gcctacgaat gtggttCcga tccctCcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatcCggttC ctattttatt CD 201 tattatcCCt gaccCggaag tcaccttttC ttttccttgg gcagtaCctc CD 251 Ctaacaagat tgatCtgttt ggatCttggt ccatgatggc ctttttattg CD 301 attttgaCga ttggatctct ctatgaatgg aaaaggggtg cttCggatCg CD 351 ggagtaa FT EDITED CDNA CD 1 atgtTggaat ttgcacctat ttgtatTtat ttagtgatca gtcTgctagt CD 51 ttctttgatt TTactcggtg ttccttttTT atttgcttcc aatagttcga CD 101 cctatccaga aaaattgtcg gcctacgaat gtggttTcga tccctTcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatcTggttT ctattttatt CD 201 tattatcTTt gaccTggaag tcaccttttT ttttccttgg gcagtaTctc CD 251 Ttaacaagat tgatTtgttt ggatTttggt ccatgatggc ctttttattg CD 301 attttgaTga ttggatctct ctatgaatgg aaaaggggtg cttTggatTg CD 351 ggagtaa SQ SEQUENCE 119 AA; MLEFAPICIY LVISLLVSLI LLGVPFLFAS NSSTYPEKLS AYECGFDPFG DARSRFDIRF YLVSILFIIF DLEVTFFFPW AVSLNKIDLF GFWSMMAFLL ILMIGSLYEW KRGALDWE* // ID AY506529_92 STANDARD; PRT; 674 AA. AC AY506529; DT Tue Jul 21 07:03:37 2009 DE Zea mays strain NB mitochondrion, complete genome. OS mitochondrion Zea mays OC Zea mays RN [1] RL Plant Physiol. 136 (3), 3486-3503 (2004) RL PUBMED 15542500 FT Full length CDS FT GENE : mat-r FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR91044.1 FT PROTEIN_NAME : maturase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 267745 - 269766 FT DIRECTIONS : negative FT EDITING : 6 S(tCg) -> L(tTg) FT EDITING : 11 L(ctC) -> L(ctT) FT EDITING : 29 P(cCc) -> L(cTc) FT EDITING : 31 S(tCc) -> F(tTc) FT EDITING : 99 P(CCc) -> F(TTc) FT EDITING : 375 P(cCC) -> L(cTT) FT EDITING : 577 S(tCc) -> F(tTc) FT EDITING : 584 P(cCt) -> L(cTt) FT EDITING : 595 Y(taC) -> Y(taT) FT EDITING : 626 P(cCa) -> L(cTa) FT EDITING : 629 P(Ccc) -> S(Tcc) FT EDITING : 632 S(tCa) -> L(tTa) FT EDITING : 635 V(gtC) -> V(gtT) FT CODON_START : 1 CL CDNALEN 2022 NT; CD 1 agaaagaaag aagggtCgaa gtttagaccg ctCacagtag ttctacccat CD 51 agaaaagatc atgaaagagg cgatcagaat ggtacCcgaa tCcatttacg CD 101 atcccgagtt tccagacaca tcgcacttcc gctcgggtcg aggctgccac CD 151 tcggccctca gacggatcaa agaagagtgg ggaacctctc gctggttttt CD 201 ggaattcgac atcaggaagt gttttcacac catcgaccga catcgattca CD 251 tctcaatctt gaaggaagag atcgacgatt ccaagttctt ttacCCcact CD 301 cagaaacagt tttccgccgg acgactcgta ggaggtgaga agggccctga CD 351 ctccgtccca aacagtgtac tactatcggc cctattaggc aatatctacc CD 401 tacacaagct cgatcaggag atagggagga tccggcagaa gcacgaaatt CD 451 cctcttgtag tgaaaataag atcggttcta ttaagaatag gtcgtcgtat CD 501 tgatgaccaa gaaaagtatg gaaaagaagc aagcttcaac gctccccaag CD 551 acaacagagc cctcatagtg gggagggtaa agagcatcca acgcaaagcg CD 601 acctttcatt cccttgtttc gtcgtggcac acccccccca caagcacccc CD 651 caggcgaagg ggagaccaga aaacgccttt cgttttccct ccttccctag CD 701 ccgccttcct taacaagccc tcgagcctcc tttgcgccgc cttcctcata CD 751 gaagccgctg ggttgacccc gaaggccgaa ttcaatggta gagaaggctt CD 801 taataagaat ttggccatga gagaccttct taagtattgc aaaagaaggg CD 851 gcccgctgat agagctgggc ggggaggcga tactagttac caggtcagag CD 901 agaggcctgg cccgtaagct ggcccccttt aaaagccatt ccttattaat CD 951 aaggatttgt tacgcgcgat atgccgacga cttactactg ggaatcgtgg CD 1001 gtgccgtatt tcttctcata gaaatacaaa aacgtatcac ccacttccta CD 1051 caatccggcc tgaacctttg ggtaggctcc gcaggatcaa caaccatagc CD 1101 tgcacggagt acggtagaat tccCCggtac ggtcattcgg gaagtccccc CD 1151 cgaggacgac tcccatacaa ttcttgcgag agctggagaa gcgtctacgg CD 1201 gtaaagcacc gtatccatat aactgcctgc cacctacgct ccgccatcca CD 1251 ttccaagtta agggacctag gttatagtat ccctatcaaa gagctgacga CD 1301 aggggatgag cggaagaggt cgtctactgg acgcggttca actagcggag CD 1351 actcttggaa aagaaagtcc ccaagttagc gtattatggg ggaccgtcaa CD 1401 gcacatccgg caaagatcaa gggggatctc gttgttgcat agctcaggtc CD 1451 agagcaaggt gccatcaggc gttcaacagg cagtctcacg atcgggcatg CD 1501 agtgtcctga agaataaatt gtatactccc tttggtcgga aggcggcggg CD 1551 ggaaggaagg ggacactggg cgggatcttt cagcagcgaa ttccccatac CD 1601 agatagaggc gcctatcaaa aagatactcc gaaggcttcg ggatcgaggt CD 1651 ctcattagcc gaagaagacc caggccaatc cacgcggcct ctttgaccaa CD 1701 cgtcagcgac agagacatag taaattggtC cgcgggcatc gcgataagtc CD 1751 Ctctgtccta ctacaggtgc tgcgacaacc tttaCcaagt ccgaacgatt CD 1801 gtcaactacc agatccgctg gtccgctata ttcaccctag cccacaagca CD 1851 caaatcttcg gcgcggaata taatccCaaa gcacCccaaa gactCaaata CD 1901 tagtCaatca agaaggtggt aagacccttg cagagttccc aaacagcata CD 1951 gagcttggga agctcggact cggtcaagat ccgaacaacg gcggagcact CD 2001 caactacatg tttaataagt ag FT EDITED CDNA CD 1 agaaagaaag aagggtTgaa gtttagaccg ctTacagtag ttctacccat CD 51 agaaaagatc atgaaagagg cgatcagaat ggtacTcgaa tTcatttacg CD 101 atcccgagtt tccagacaca tcgcacttcc gctcgggtcg aggctgccac CD 151 tcggccctca gacggatcaa agaagagtgg ggaacctctc gctggttttt CD 201 ggaattcgac atcaggaagt gttttcacac catcgaccga catcgattca CD 251 tctcaatctt gaaggaagag atcgacgatt ccaagttctt ttacTTcact CD 301 cagaaacagt tttccgccgg acgactcgta ggaggtgaga agggccctga CD 351 ctccgtccca aacagtgtac tactatcggc cctattaggc aatatctacc CD 401 tacacaagct cgatcaggag atagggagga tccggcagaa gcacgaaatt CD 451 cctcttgtag tgaaaataag atcggttcta ttaagaatag gtcgtcgtat CD 501 tgatgaccaa gaaaagtatg gaaaagaagc aagcttcaac gctccccaag CD 551 acaacagagc cctcatagtg gggagggtaa agagcatcca acgcaaagcg CD 601 acctttcatt cccttgtttc gtcgtggcac acccccccca caagcacccc CD 651 caggcgaagg ggagaccaga aaacgccttt cgttttccct ccttccctag CD 701 ccgccttcct taacaagccc tcgagcctcc tttgcgccgc cttcctcata CD 751 gaagccgctg ggttgacccc gaaggccgaa ttcaatggta gagaaggctt CD 801 taataagaat ttggccatga gagaccttct taagtattgc aaaagaaggg CD 851 gcccgctgat agagctgggc ggggaggcga tactagttac caggtcagag CD 901 agaggcctgg cccgtaagct ggcccccttt aaaagccatt ccttattaat CD 951 aaggatttgt tacgcgcgat atgccgacga cttactactg ggaatcgtgg CD 1001 gtgccgtatt tcttctcata gaaatacaaa aacgtatcac ccacttccta CD 1051 caatccggcc tgaacctttg ggtaggctcc gcaggatcaa caaccatagc CD 1101 tgcacggagt acggtagaat tccTTggtac ggtcattcgg gaagtccccc CD 1151 cgaggacgac tcccatacaa ttcttgcgag agctggagaa gcgtctacgg CD 1201 gtaaagcacc gtatccatat aactgcctgc cacctacgct ccgccatcca CD 1251 ttccaagtta agggacctag gttatagtat ccctatcaaa gagctgacga CD 1301 aggggatgag cggaagaggt cgtctactgg acgcggttca actagcggag CD 1351 actcttggaa aagaaagtcc ccaagttagc gtattatggg ggaccgtcaa CD 1401 gcacatccgg caaagatcaa gggggatctc gttgttgcat agctcaggtc CD 1451 agagcaaggt gccatcaggc gttcaacagg cagtctcacg atcgggcatg CD 1501 agtgtcctga agaataaatt gtatactccc tttggtcgga aggcggcggg CD 1551 ggaaggaagg ggacactggg cgggatcttt cagcagcgaa ttccccatac CD 1601 agatagaggc gcctatcaaa aagatactcc gaaggcttcg ggatcgaggt CD 1651 ctcattagcc gaagaagacc caggccaatc cacgcggcct ctttgaccaa CD 1701 cgtcagcgac agagacatag taaattggtT cgcgggcatc gcgataagtc CD 1751 Ttctgtccta ctacaggtgc tgcgacaacc tttaTcaagt ccgaacgatt CD 1801 gtcaactacc agatccgctg gtccgctata ttcaccctag cccacaagca CD 1851 caaatcttcg gcgcggaata taatccTaaa gcacTccaaa gactTaaata CD 1901 tagtTaatca agaaggtggt aagacccttg cagagttccc aaacagcata CD 1951 gagcttggga agctcggact cggtcaagat ccgaacaacg gcggagcact CD 2001 caactacatg tttaataagt ag SQ SEQUENCE 674 AA; RKKEGLKFRP LTVVLPIEKI MKEAIRMVLE FIYDPEFPDT SHFRSGRGCH SALRRIKEEW GTSRWFLEFD IRKCFHTIDR HRFISILKEE IDDSKFFYFT QKQFSAGRLV GGEKGPDSVP NSVLLSALLG NIYLHKLDQE IGRIRQKHEI PLVVKIRSVL LRIGRRIDDQ EKYGKEASFN APQDNRALIV GRVKSIQRKA TFHSLVSSWH TPPTSTPRRR GDQKTPFVFP PSLAAFLNKP SSLLCAAFLI EAAGLTPKAE FNGREGFNKN LAMRDLLKYC KRRGPLIELG GEAILVTRSE RGLARKLAPF KSHSLLIRIC YARYADDLLL GIVGAVFLLI EIQKRITHFL QSGLNLWVGS AGSTTIAARS TVEFLGTVIR EVPPRTTPIQ FLRELEKRLR VKHRIHITAC HLRSAIHSKL RDLGYSIPIK ELTKGMSGRG RLLDAVQLAE TLGKESPQVS VLWGTVKHIR QRSRGISLLH SSGQSKVPSG VQQAVSRSGM SVLKNKLYTP FGRKAAGEGR GHWAGSFSSE FPIQIEAPIK KILRRLRDRG LISRRRPRPI HAASLTNVSD RDIVNWFAGI AISLLSYYRC CDNLYQVRTI VNYQIRWSAI FTLAHKHKSS ARNIILKHSK DLNIVNQEGG KTLAEFPNSI ELGKLGLGQD PNNGGALNYM FNK* // ID AY506529_104 STANDARD; PRT; 75 AA. AC AY506529; DT Tue Jul 21 07:03:37 2009 DE Zea mays strain NB mitochondrion, complete genome. OS mitochondrion Zea mays OC Zea mays RN [1] RL Plant Physiol. 136 (3), 3486-3503 (2004) RL PUBMED 15542500 FT Full length CDS FT GENE : atp9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR91187.1 FT PROTEIN_NAME : ATPase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 299238 - 299462 FT DIRECTIONS : negative FT EDITING : 7 S(tCa) -> L(tTa) FT EDITING : 28 L(Ctc) -> F(Ttc) FT EDITING : 31 S(tCg) -> L(tTg) FT EDITING : 45 S(tCa) -> L(tTa) FT EDITING : 61 S(tCg) -> L(tTg) FT EDITING : 64 P(cCa) -> L(cTa) FT EDITING : 71 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gagctaaatC aataggtgct ggagctgcta caattgcttt CD 51 agcgggagct gctgtcggta ttggaaacgt tCtcagttct tCgattcatt CD 101 ccgtggcgcg aaatccttca ttggctaaac aatCattcgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca tCgtttgccc Caatgatggc CD 201 ctttctgatc tCattcgttt tctaa FT EDITED CDNA CD 1 atgttagaag gagctaaatT aataggtgct ggagctgcta caattgcttt CD 51 agcgggagct gctgtcggta ttggaaacgt tTtcagttct tTgattcatt CD 101 ccgtggcgcg aaatccttca ttggctaaac aatTattcgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca tTgtttgccc Taatgatggc CD 201 ctttctgatc tTattcgttt tctaa SQ SEQUENCE 75 AA; MLEGAKLIGA GAATIALAGA AVGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI LFVF* // ID AY506529_111 STANDARD; PRT; 117 AA. AC AY506529; DT Tue Jul 21 07:03:37 2009 DE Zea mays strain NB mitochondrion, complete genome. OS mitochondrion Zea mays OC Zea mays RN [1] RL Plant Physiol. 136 (3), 3486-3503 (2004) RL PUBMED 15542500 FT Full length CDS FT GENE : rps13 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR91134.1 FT PROTEIN_NAME : ribosomal protein S13 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 319613 - 319963 FT DIRECTIONS : positive FT EDITING : 2 S(tCa) -> L(tTa) FT EDITING : 9 S(tCa) -> L(tTa) FT EDITING : 19 S(tCa) -> L(tTa) FT EDITING : 34 R(Cgt) -> C(Tgt) FT EDITING : 86 R(Cgt) -> C(Tgt) FT EDITING : 96 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 351 NT; CD 1 atgtCatata tctcaggagc tagatCactt cccgatgaac aagtaagaat CD 51 tgcctCaaca aaaatggatg gaattggacc gaaaaaagcc attcagcttC CD 101 gttatcgatt aggtatcagt gggaacatca agattcatga gttaactaag CD 151 tatcagatcg accaaattga acaaatgata gctcaagatc atgttgttca CD 201 ttgggaattg aagaggggag aacgagcaga catcgaacga ttaatttcta CD 251 tttctCgtta tcgtggaatt cgtcatcaag atggatCgcc attacgcggt CD 301 caacgaactc atactaatgc aaggactgct cgcaagcaaa ttcggaaatg CD 351 a FT EDITED CDNA CD 1 atgtTatata tctcaggagc tagatTactt cccgatgaac aagtaagaat CD 51 tgcctTaaca aaaatggatg gaattggacc gaaaaaagcc attcagcttT CD 101 gttatcgatt aggtatcagt gggaacatca agattcatga gttaactaag CD 151 tatcagatcg accaaattga acaaatgata gctcaagatc atgttgttca CD 201 ttgggaattg aagaggggag aacgagcaga catcgaacga ttaatttcta CD 251 tttctTgtta tcgtggaatt cgtcatcaag atggatTgcc attacgcggt CD 301 caacgaactc atactaatgc aaggactgct cgcaagcaaa ttcggaaatg CD 351 a SQ SEQUENCE 117 AA; MLYISGARLL PDEQVRIALT KMDGIGPKKA IQLCYRLGIS GNIKIHELTK YQIDQIEQMI AQDHVVHWEL KRGERADIER LISISCYRGI RHQDGLPLRG QRTHTNARTA RKQIRK* // ID AY506529_159 STANDARD; PRT; 261 AA. AC AY506529; DT Tue Jul 21 07:03:37 2009 DE Zea mays strain NB mitochondrion, complete genome. OS mitochondrion Zea mays OC Zea mays RN [1] RL Plant Physiol. 136 (3), 3486-3503 (2004) RL PUBMED 15542500 FT Full length CDS FT GENE : cox2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR91199.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 130/1 FT EDITING : 5 S(tCa) -> L(tTa) FT EDITING : 11 L(Ctc) -> F(Ttc) FT EDITING : 26 S(tCt) -> F(tTt) FT EDITING : 56 S(tCa) -> L(tTa) FT EDITING : 57 R(Cgg) -> W(Tgg) FT EDITING : 87 R(Cgg) -> W(Tgg) FT EDITING : 95 P(cCa) -> L(cTa) FT EDITING : 129 R(Cgg) -> W(Tgg) FT EDITING : 150 T(aCg) -> M(aTg) FT EDITING : 156 P(CCa) -> L(TTa) FT EDITING : 161 S(tCa) -> L(tTa) FT EDITING : 184 P(Ccc) -> S(Tcc) FT EDITING : 188 P(cCt) -> L(cTt) FT EDITING : 196 S(tCa) -> L(tTa) FT EDITING : 207 S(tCa) -> L(tTa) FT EDITING : 213 S(tCg) -> L(tTg) FT EDITING : 235 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 783 NT; CD 1 atgattcttc gttCattaga atgtcgattc Ctcacaatcg ctctttgtga CD 51 tgctgcggaa ccatggcaat taggatCtca agacgcagca acacctatga CD 101 tgcaaggaat cattgactta catcacgata tctttttctt cctcattctg CD 151 attttggttt tcgtatCaCg gatgttggtt cgcgctttat ggcatttcaa CD 201 cgagcaaact aatccaatcc cgcaaaggat tgttcatgga actactatcg CD 251 aaattattCg gaccattttt cctagtgtca ttcCattgtt cattgctata CD 301 ccatcgtttg ctctgttata ctcaatggac ggggtattag tagatccagc CD 351 cattactatc aaagctattg gacatcaatg gtatCggact tatgagtatt CD 401 cggactataa cagttccgat gaacagtcac tcacttttga cagttataCg CD 451 attccagaag atgatCCaga attgggtcaa tCacgtttat tagaagttga CD 501 caatagagtg gttgtaccag ccaaaactca tctacgtatg attgtaacaC CD 551 ccgctgatgt acCtcatagt tgggctgtac cttcctCagg tgtcaaatgt CD 601 gatgctgtac ctggtcgttC aaatcttacc tccatctCgg tacaacgaga CD 651 aggagtttac tatggtcagt gcagtgagat ttgtggaact aatcatgcct CD 701 ttaCgcctat cgtcgtagaa gcagtgactt tgaaagatta tgcggattgg CD 751 gtatccaatc aattaatcct ccaaaccaac taa FT EDITED CDNA CD 1 atgattcttc gttTattaga atgtcgattc Ttcacaatcg ctctttgtga CD 51 tgctgcggaa ccatggcaat taggatTtca agacgcagca acacctatga CD 101 tgcaaggaat cattgactta catcacgata tctttttctt cctcattctg CD 151 attttggttt tcgtatTaTg gatgttggtt cgcgctttat ggcatttcaa CD 201 cgagcaaact aatccaatcc cgcaaaggat tgttcatgga actactatcg CD 251 aaattattTg gaccattttt cctagtgtca ttcTattgtt cattgctata CD 301 ccatcgtttg ctctgttata ctcaatggac ggggtattag tagatccagc CD 351 cattactatc aaagctattg gacatcaatg gtatTggact tatgagtatt CD 401 cggactataa cagttccgat gaacagtcac tcacttttga cagttataTg CD 451 attccagaag atgatTTaga attgggtcaa tTacgtttat tagaagttga CD 501 caatagagtg gttgtaccag ccaaaactca tctacgtatg attgtaacaT CD 551 ccgctgatgt acTtcatagt tgggctgtac cttcctTagg tgtcaaatgt CD 601 gatgctgtac ctggtcgttT aaatcttacc tccatctTgg tacaacgaga CD 651 aggagtttac tatggtcagt gcagtgagat ttgtggaact aatcatgcct CD 701 ttaTgcctat cgtcgtagaa gcagtgactt tgaaagatta tgcggattgg CD 751 gtatccaatc aattaatcct ccaaaccaac taa SQ SEQUENCE 261 AA; MILRLLECRF FTIALCDAAE PWQLGFQDAA TPMMQGIIDL HHDIFFFLIL ILVFVLWMLV RALWHFNEQT NPIPQRIVHG TTIEIIWTIF PSVILLFIAI PSFALLYSMD GVLVDPAITI KAIGHQWYWT YEYSDYNSSD EQSLTFDSYM IPEDDLELGQ LRLLEVDNRV VVPAKTHLRM IVTSADVLHS WAVPSLGVKC DAVPGRLNLT SILVQREGVY YGQCSEICGT NHAFMPIVVE AVTLKDYADW VSNQLILQTN * // ID AY506529_162 STANDARD; PRT; 396 AA. AC AY506529; DT Tue Jul 21 07:03:37 2009 DE Zea mays strain NB mitochondrion, complete genome. OS mitochondrion Zea mays OC Zea mays RN [1] RL Plant Physiol. 136 (3), 3486-3503 (2004) RL PUBMED 15542500 FT Full length CDS FT GENE : atp6 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR91060.2 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 562726 - 563913 FT DIRECTIONS : positive FT EDITING : 396 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1188 NT; CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac cctccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggcac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaatttgga CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttccatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatCaa FT EDITED CDNA CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac cctccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggcac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaatttgga CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttccatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatTaa SQ SEQUENCE 396 AA; MMMMTRWSST DMKRRNRILA NMVPIRNLSL PDYYEYEEEY PPVSREATRG VCILLRIDRY LSSIGRSIQD REVLRDFRQR LLFPQREAGH SFSEIYDDIR AHGVEASRLG QPLRDLYDEM ERNGEIVNNG SIIIPGGGGP VTESPLDQFG IHPILDLNIG KYYVSFTNLS LSMLLTLGLV LLLVFVVTKK GGGKSVPNAF QSLVELIYDF VPNLVNEQIG GLSGNVKHKF FPCISVTFTF SLFRNPQGMI PFSFTVTSHF LITLALSFSI FIGITIVGFQ RHGLHFFSFL LPAGVPLPLA PFLVLLELIS HCFRALSSGI RLFANMMAGH SSVKILSGFA WTMLFLNNIF YFLGDLGPLF IVLALTGLEL GVAISQAHVS TISICIYLND ATNLH* // ID AY506529_165 STANDARD; PRT; 221 AA. AC AY506529; DT Tue Jul 21 07:03:37 2009 DE Zea mays strain NB mitochondrion, complete genome. OS mitochondrion Zea mays OC Zea mays RN [1] RL Plant Physiol. 136 (3), 3486-3503 (2004) RL PUBMED 15542500 FT Full length CDS FT GENE : nad6 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAR91066.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 565003 - 565665 FT DIRECTIONS : positive FT EDITING : 9 P(CCt) -> F(TTt) FT EDITING : 30 P(CCc) -> F(TTc) FT EDITING : 46 L(ctC) -> L(ctT) FT EDITING : 49 S(tCc) -> F(tTc) FT EDITING : 53 F(ttC) -> F(ttT) FT EDITING : 54 P(cCa) -> L(cTa) FT EDITING : 57 H(Cat) -> Y(Tat) FT EDITING : 64 S(tCa) -> L(tTa) FT EDITING : 149 S(tCc) -> F(tTc) FT EDITING : 190 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 663 NT; CD 1 atgattcttt ccgttttgtc gagcCCtgct ttggtctctg gtttgatggt CD 51 tgtacgtgct aaaaatccgg tacattccgt tttgtttCCc atcctagtct CD 101 tttgcgacac ttctggttta cttattttgt taggtctCga cttctCcgct CD 151 atgatcttCc CagtagttCa tataggagct attgccgttt Cattcctatt CD 201 cgtggttatg atgttcaata ttcaaatagc ggagattcac gaagaagtat CD 251 tgcgctattt accagtgagt ggtattattg gactgatctt ttggtgggaa CD 301 atgttcttca ttttagataa tgaaaccatt ccattactac caacccacag CD 351 aaatacgacc tctctgaaat atacggttta tgccggaaag gtacgaagtt CD 401 ggactaattt ggaaacattg ggcaatttac tttataccta ctattCcgtc CD 451 tggtttttgg tttctagtct gattttatta gtagctatga ttggggctat CD 501 agtacttact atgcatagga ctacaaaggt gaaaagacag gatgtattcc CD 551 gacgaaatgc cttggattCt aggaggacta ctattcatat tcagaacaga CD 601 aggttcttct cccacaaagg ggatgacgca cctgtccccc ccgctgatcc CD 651 ggaatccatt taa FT EDITED CDNA CD 1 atgattcttt ccgttttgtc gagcTTtgct ttggtctctg gtttgatggt CD 51 tgtacgtgct aaaaatccgg tacattccgt tttgtttTTc atcctagtct CD 101 tttgcgacac ttctggttta cttattttgt taggtctTga cttctTcgct CD 151 atgatcttTc TagtagttTa tataggagct attgccgttt Tattcctatt CD 201 cgtggttatg atgttcaata ttcaaatagc ggagattcac gaagaagtat CD 251 tgcgctattt accagtgagt ggtattattg gactgatctt ttggtgggaa CD 301 atgttcttca ttttagataa tgaaaccatt ccattactac caacccacag CD 351 aaatacgacc tctctgaaat atacggttta tgccggaaag gtacgaagtt CD 401 ggactaattt ggaaacattg ggcaatttac tttataccta ctattTcgtc CD 451 tggtttttgg tttctagtct gattttatta gtagctatga ttggggctat CD 501 agtacttact atgcatagga ctacaaaggt gaaaagacag gatgtattcc CD 551 gacgaaatgc cttggattTt aggaggacta ctattcatat tcagaacaga CD 601 aggttcttct cccacaaagg ggatgacgca cctgtccccc ccgctgatcc CD 651 ggaatccatt taa SQ SEQUENCE 221 AA; MILSVLSSFA LVSGLMVVRA KNPVHSVLFF ILVFCDTSGL LILLGLDFFA MIFLVVYIGA IAVLFLFVVM MFNIQIAEIH EEVLRYLPVS GIIGLIFWWE MFFILDNETI PLLPTHRNTT SLKYTVYAGK VRSWTNLETL GNLLYTYYFV WFLVSSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNALDF RRTTIHIQNR RFFSHKGDDA PVPPADPESI * // ID AY521591_1 STANDARD; PRT; 149 AA. AC AY521591; DT Tue Jul 21 07:03:46 2009 DE Daucus carota ribosomal protein S7 (rps7) gene, cytochrome oxidase OS mitochondrion Daucus carota (carrot) OC Daucus carota RN [1] RL Mol. Genet. Genomics 275 (1), 68-73 (2006) RL PUBMED 16362373 FT Full length CDS FT GENE : rps7 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAV54056.1 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1469 - 1915 FT DIRECTIONS : positive FT EDITING : 39 P(cCc) -> L(cTc) FT EDITING : 111 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 447 NT; CD 1 atgggggact tggatggtga gcaaaaacaa ttgatcaaga agttggtcaa CD 51 ctttcgcatg aaagaaggta aaaaaacaag agttcgtgct attgtttata CD 101 agactttgca tcgccCcggt cgaactgaac gcgatgtaat caaacttatg CD 151 gttgacgccc tagagaatat aaagcccata tgcaaagtgg aaagagtagg CD 201 aagagcaggt actatttatg atgtccctgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggacccttg aagcagcttt caaacgacgt CD 301 ataagctaca ggacaagctt agagcaatgt tCatttgatg agatactgga CD 351 tgcttaccga aagaggggaa ttgtacgtaa gaaaaggggg aatcttcata CD 401 gactggcttc caccaatcga agtatcgcgc atttcagatg gtggtaa FT EDITED CDNA CD 1 atgggggact tggatggtga gcaaaaacaa ttgatcaaga agttggtcaa CD 51 ctttcgcatg aaagaaggta aaaaaacaag agttcgtgct attgtttata CD 101 agactttgca tcgccTcggt cgaactgaac gcgatgtaat caaacttatg CD 151 gttgacgccc tagagaatat aaagcccata tgcaaagtgg aaagagtagg CD 201 aagagcaggt actatttatg atgtccctgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggacccttg aagcagcttt caaacgacgt CD 301 ataagctaca ggacaagctt agagcaatgt tTatttgatg agatactgga CD 351 tgcttaccga aagaggggaa ttgtacgtaa gaaaaggggg aatcttcata CD 401 gactggcttc caccaatcga agtatcgcgc atttcagatg gtggtaa SQ SEQUENCE 149 AA; MGDLDGEQKQ LIKKLVNFRM KEGKKTRVRA IVYKTLHRLG RTERDVIKLM VDALENIKPI CKVERVGRAG TIYDVPGIVA RDRQQTLAIR WTLEAAFKRR ISYRTSLEQC LFDEILDAYR KRGIVRKKRG NLHRLASTNR SIAHFRWW* // ID AY521591_2 STANDARD; PRT; 755 AA. AC AY521591; DT Tue Jul 21 07:03:46 2009 DE Daucus carota ribosomal protein S7 (rps7) gene, cytochrome oxidase OS mitochondrion Daucus carota (carrot) OC Daucus carota RN [1] RL Mol. Genet. Genomics 275 (1), 68-73 (2006) RL PUBMED 16362373 FT Full length CDS FT GENE : cox1 FT NOTE : differs from cox1-2 because of different C-terminal FT LOCUS_TAG : FT PROTEIN_ID : AAV54057.1 FT PROTEIN_NAME : cytochrome oxidase subunit I FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2211 - 4475 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 4 P(cCg) -> L(cTg) FT EDITING : 5 V(gtC) -> V(gtT) FT EDITING : 81 S(tCt) -> F(tTt) FT EDITING : 85 S(tCt) -> F(tTt) FT EDITING : 118 P(Cca) -> S(Tca) FT EDITING : 148 S(tCa) -> L(tTa) FT EDITING : 151 S(tCt) -> F(tTt) FT EDITING : 153 P(cCt) -> L(cTt) FT EDITING : 172 S(tCc) -> F(tTc) FT EDITING : 184 S(tCa) -> L(tTa) FT EDITING : 197 P(cCa) -> L(cTa) FT EDITING : 223 S(tCt) -> F(tTt) FT EDITING : 239 R(Cgg) -> W(Tgg) FT EDITING : 249 P(cCc) -> L(cTc) FT EDITING : 254 S(tCc) -> F(tTc) FT EDITING : 346 S(tCc) -> F(tTc) FT EDITING : 360 P(cCg) -> L(cTg) FT EDITING : 396 H(Cac) -> Y(Tac) FT EDITING : 425 P(cCg) -> L(cTg) FT EDITING : 469 R(Cgt) -> C(Tgt) FT EDITING : 478 S(tCa) -> L(tTa) FT EDITING : 497 P(Cca) -> S(Tca) FT EDITING : 500 P(cCg) -> L(cTg) FT EDITING : 589 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 2265 NT; CD 1 aCgacaaatc CggtCcgatg gctgttctcc actaaccaca aagatatagg CD 51 gactctctat ttcatctttg gtgccattgc tggagtgatg ggcacatgct CD 101 tctcagtact gattcgtatg gaattagcac gacccggcga tcaaattctt CD 151 ggcgggaatc atcaacttta taatgtttta ataacggctc acgccttttt CD 201 aatgatcttt tttatggtta tgccggcgat gataggtgga tCtggtaatt CD 251 ggtCtgttcc gattctgata ggtgcgcctg acatggcatt tccacgatta CD 301 aataatattt cattctggtt gttgccacca agtctcttgc tcctattaag CD 351 cCcagcctta gtagaagtgg gtagcggcac tgggtggacg gtctatccgc CD 401 ccttaagtgg tattaccagc cattctggag gagcagttga ttCagcaatt CD 451 tCtagtcCtc atctatccgg tgtttcatcc attttaggtt ctatcaactt CD 501 tataacaact atctCcaaca tgcgtggacc tggaatgact atgcatagat CD 551 Cacccctatt tgtgtggtcc gttctagtga cagcattccC acttttatta CD 601 tcacttccgg tactggcagg ggcaattacc atgttattaa ccgatcgaaa CD 651 ctttaataca accttttCtg atcccgctgg agggggagac cccatattat CD 701 accagcatct ctttCggttc ttcggccatc cagaggtgta tattcCcatt CD 751 ctgcctggat Ccggtatcat aagtcatatc gtttctactt tttcgggaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgatc agtataggtg CD 851 ttcttggatt tcttgtttgg gctcatcata tgtttactgt gggcttagac CD 901 gttgataccc gtgcctactt caccgcagct accatgatca tagctgtccc CD 951 cactggaata aaaatattta gttggatcgc taccatgtgg gggggttcga CD 1001 tacaatacaa aacacccatg ttatttgctg tagggtCcat ctttttgttc CD 1051 accataggag gactcactgg aatagttcCg gcaaattctg ggctagacat CD 1101 tgctctacat gatacttatt atgtggttgc acatttccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ttatttgcag gatttCacta ttgggtaggt CD 1201 aaaatctttg gtcggacata tcctgaaact ttaggtcaaa tccatttttg CD 1251 gatcactttt ttcggggtga atcCgacctt ttttcccatg catttcttag CD 1301 ggctttcggg tatgccacgt cgcattccag attatccaga tgcttacgct CD 1351 ggatggaatg cccttagcag ttctggctct tatatatccg tagttgggat CD 1401 ttgtCgtttc ttcgtggtcg taacaatcac ttCaagcagt ggaaacaaca CD 1451 aaagatgcgc tccaagtcct tgggctgttg aacagaatCc aaacacacCg CD 1501 gaatggatga tacaaagtcc tccagctttt catacttttg gagaacttcc CD 1551 tgctatcaag gagacgaaag gcaatgtgaa aaaaaaaatt ggagaacttc CD 1601 ctgctatcaa ggagaccaat ctcactggat ctattgtgga tgttcctgcg CD 1651 ggaaaggcta tgctagggcg tgtggtcgac gcgttggaag tacgctatga CD 1701 tgatccagag aaacgtgtgg tttctgaacc cattgggatg acccaagaat CD 1751 ttcgctattt cgattCtgca aaaccatgtt ctctatttat tggtcttttt CD 1801 gttattttta tcttgaaccc acatatggcg gaagcatcgg gcctccccga CD 1851 tttaaaccac tttccgccct ctccgtctcc ctctccgtcc acccctccgt CD 1901 ccaccccgga gatagattct acccttcacc taggccatcc ccatgcttta CD 1951 aatgagcttg ggggcgatgc agggccgtcg tcctccgaag gatcggcggt CD 2001 gcatggaggg atggagtgtc cactcctcga atctattatt gagaacagaa CD 2051 tgaaaatcta tggttcacga aggacaacag ctgccttatt taaagacatt CD 2101 aatcttagca cccaggacta taaggagctc gcccgtgcct ttgtcaggaa CD 2151 gtacgaaatc ccaatccaat ctgaggacca gttacgcgta agaatgtcct CD 2201 tttataaatc tctgcagaga tgtgacagca tgttttatac tttcttgaaa CD 2251 gataggttca agtaa FT EDITED CDNA CD 1 aTgacaaatc TggtTcgatg gctgttctcc actaaccaca aagatatagg CD 51 gactctctat ttcatctttg gtgccattgc tggagtgatg ggcacatgct CD 101 tctcagtact gattcgtatg gaattagcac gacccggcga tcaaattctt CD 151 ggcgggaatc atcaacttta taatgtttta ataacggctc acgccttttt CD 201 aatgatcttt tttatggtta tgccggcgat gataggtgga tTtggtaatt CD 251 ggtTtgttcc gattctgata ggtgcgcctg acatggcatt tccacgatta CD 301 aataatattt cattctggtt gttgccacca agtctcttgc tcctattaag CD 351 cTcagcctta gtagaagtgg gtagcggcac tgggtggacg gtctatccgc CD 401 ccttaagtgg tattaccagc cattctggag gagcagttga ttTagcaatt CD 451 tTtagtcTtc atctatccgg tgtttcatcc attttaggtt ctatcaactt CD 501 tataacaact atctTcaaca tgcgtggacc tggaatgact atgcatagat CD 551 Tacccctatt tgtgtggtcc gttctagtga cagcattccT acttttatta CD 601 tcacttccgg tactggcagg ggcaattacc atgttattaa ccgatcgaaa CD 651 ctttaataca accttttTtg atcccgctgg agggggagac cccatattat CD 701 accagcatct ctttTggttc ttcggccatc cagaggtgta tattcTcatt CD 751 ctgcctggat Tcggtatcat aagtcatatc gtttctactt tttcgggaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgatc agtataggtg CD 851 ttcttggatt tcttgtttgg gctcatcata tgtttactgt gggcttagac CD 901 gttgataccc gtgcctactt caccgcagct accatgatca tagctgtccc CD 951 cactggaata aaaatattta gttggatcgc taccatgtgg gggggttcga CD 1001 tacaatacaa aacacccatg ttatttgctg tagggtTcat ctttttgttc CD 1051 accataggag gactcactgg aatagttcTg gcaaattctg ggctagacat CD 1101 tgctctacat gatacttatt atgtggttgc acatttccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ttatttgcag gatttTacta ttgggtaggt CD 1201 aaaatctttg gtcggacata tcctgaaact ttaggtcaaa tccatttttg CD 1251 gatcactttt ttcggggtga atcTgacctt ttttcccatg catttcttag CD 1301 ggctttcggg tatgccacgt cgcattccag attatccaga tgcttacgct CD 1351 ggatggaatg cccttagcag ttctggctct tatatatccg tagttgggat CD 1401 ttgtTgtttc ttcgtggtcg taacaatcac ttTaagcagt ggaaacaaca CD 1451 aaagatgcgc tccaagtcct tgggctgttg aacagaatTc aaacacacTg CD 1501 gaatggatga tacaaagtcc tccagctttt catacttttg gagaacttcc CD 1551 tgctatcaag gagacgaaag gcaatgtgaa aaaaaaaatt ggagaacttc CD 1601 ctgctatcaa ggagaccaat ctcactggat ctattgtgga tgttcctgcg CD 1651 ggaaaggcta tgctagggcg tgtggtcgac gcgttggaag tacgctatga CD 1701 tgatccagag aaacgtgtgg tttctgaacc cattgggatg acccaagaat CD 1751 ttcgctattt cgattTtgca aaaccatgtt ctctatttat tggtcttttt CD 1801 gttattttta tcttgaaccc acatatggcg gaagcatcgg gcctccccga CD 1851 tttaaaccac tttccgccct ctccgtctcc ctctccgtcc acccctccgt CD 1901 ccaccccgga gatagattct acccttcacc taggccatcc ccatgcttta CD 1951 aatgagcttg ggggcgatgc agggccgtcg tcctccgaag gatcggcggt CD 2001 gcatggaggg atggagtgtc cactcctcga atctattatt gagaacagaa CD 2051 tgaaaatcta tggttcacga aggacaacag ctgccttatt taaagacatt CD 2101 aatcttagca cccaggacta taaggagctc gcccgtgcct ttgtcaggaa CD 2151 gtacgaaatc ccaatccaat ctgaggacca gttacgcgta agaatgtcct CD 2201 tttataaatc tctgcagaga tgtgacagca tgttttatac tttcttgaaa CD 2251 gataggttca agtaa SQ SEQUENCE 755 AA; MTNLVRWLFS TNHKDIGTLY FIFGAIAGVM GTCFSVLIRM ELARPGDQIL GGNHQLYNVL ITAHAFLMIF FMVMPAMIGG FGNWFVPILI GAPDMAFPRL NNISFWLLPP SLLLLLSSAL VEVGSGTGWT VYPPLSGITS HSGGAVDLAI FSLHLSGVSS ILGSINFITT IFNMRGPGMT MHRLPLFVWS VLVTAFLLLL SLPVLAGAIT MLLTDRNFNT TFFDPAGGGD PILYQHLFWF FGHPEVYILI LPGFGIISHI VSTFSGKPVF GYLGMVYAMI SIGVLGFLVW AHHMFTVGLD VDTRAYFTAA TMIIAVPTGI KIFSWIATMW GGSIQYKTPM LFAVGFIFLF TIGGLTGIVL ANSGLDIALH DTYYVVAHFH YVLSMGAVFA LFAGFYYWVG KIFGRTYPET LGQIHFWITF FGVNLTFFPM HFLGLSGMPR RIPDYPDAYA GWNALSSSGS YISVVGICCF FVVVTITLSS GNNKRCAPSP WAVEQNSNTL EWMIQSPPAF HTFGELPAIK ETKGNVKKKI GELPAIKETN LTGSIVDVPA GKAMLGRVVD ALEVRYDDPE KRVVSEPIGM TQEFRYFDFA KPCSLFIGLF VIFILNPHMA EASGLPDLNH FPPSPSPSPS TPPSTPEIDS TLHLGHPHAL NELGGDAGPS SSEGSAVHGG MECPLLESII ENRMKIYGSR RTTAALFKDI NLSTQDYKEL ARAFVRKYEI PIQSEDQLRV RMSFYKSLQR CDSMFYTFLK DRFK* // ID AY727902_1 STANDARD; PRT; 394 AA. AC AY727902; DT Tue Jul 21 07:03:52 2009 DE Vitis vinifera cytochrome b gene, complete cds; mitochondrial. OS mitochondrion Vitis vinifera OC Vitis vinifera RN [1] RL Biochimie 88 (5), 431-435 (2006) RL PUBMED 16310923 FT Full length CDS FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAU25941.1 FT PROTEIN_NAME : cytochrome b FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 1182 FT DIRECTIONS : positive FT EDITING : 16 S(tcC) -> S(tcT) FT EDITING : 60 H(Cac) -> Y(Tac) FT EDITING : 96 L(Ctc) -> F(Ttc) FT EDITING : 100 H(Cac) -> Y(Tac) FT EDITING : 109 H(Cat) -> Y(Tat) FT EDITING : 120 R(Cgg) -> W(Tgg) FT EDITING : 136 T(aCa) -> I(aTa) FT EDITING : 140 P(cCa) -> L(cTa) FT EDITING : 190 H(Cat) -> Y(Tat) FT EDITING : 194 L(Ctt) -> F(Ttt) FT EDITING : 239 R(Cgg) -> W(Tgg) FT EDITING : 242 S(tCt) -> F(tTt) FT EDITING : 246 S(tCt) -> F(tTt) FT EDITING : 270 P(Ccc) -> S(Tcc) FT EDITING : 285 H(Cat) -> Y(Tat) FT EDITING : 303 P(cCa) -> L(cTa) FT EDITING : 328 H(Cac) -> Y(Tac) FT EDITING : 339 R(Cgc) -> C(Tgc) FT EDITING : 361 P(Cct) -> S(Tct) FT EDITING : 362 P(Cct) -> S(Tct) FT EDITING : 375 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 1182 NT; CD 1 atgactataa ggaaccaacg attctctctt cttaaacaac ctatatcCtc CD 51 cacactgaat cagcatttga tagattatcc aaccccgagc aatcttagtt CD 101 attggtgggg gttcggttcg ttagctggta tttgtttagt cattcagata CD 151 gtcactggcg tttttttagc tatgcatCac acacctcatg tggatttagc CD 201 tttcaacagc gtagaacacg ttatgagaga tgttgaaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttCtcat tgtggttCac CD 301 cttcatattt ttcgtggtct atatCatgcg agttatagca gtcctaggga CD 351 atttgttCgg tgtctcggag ttgtaatctt cctattaatg attgtgacag CD 401 cttttaCagg atacgtacCa ccttggggtc agatgagctt ttggggagct CD 451 acagtaatta caagcttagc tagcgccata cctgtagtag gagataccat CD 501 agtgacttgg ctttggggtg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tcttcatCat ttactccccC ttattttagt aggcgccagt CD 601 cttcttcatc tggccgcatt gcatcaatat ggatcaaata atccattggg CD 651 tgtccattca gagatggata aaatttcttt ttacccttat ttttatgtaa CD 701 aggatctagt aggtCgggta gcttCtgcta tcttttCttc catttggatt CD 751 ttttatgctc ctaatgtttt ggggcatccc gacaattata tacctgctaa CD 801 tccgatgCcc accccgcctc atattgtgcc ggaatggtat ttcctaccga CD 851 tcCatgccat tcttcgtagt atacctgaca aatcgggagg tgtagccgca CD 901 atagcacCag tttttatatg tctgttggct ttaccttttt ttaaaagtat CD 951 gtatgtgcgt agttcaagtt ttcgaccgat tCaccaagga atattttggt CD 1001 tgcttttggc ggatCgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaggcaccat ttgttactat tggacaaatt CctCcttttg ttttcttctt CD 1101 gttctttgcc ataacgccca ttcCgggacg agttggaaga ggaattccta CD 1151 attcttacac ggatgagact gatcacacct ga FT EDITED CDNA CD 1 atgactataa ggaaccaacg attctctctt cttaaacaac ctatatcTtc CD 51 cacactgaat cagcatttga tagattatcc aaccccgagc aatcttagtt CD 101 attggtgggg gttcggttcg ttagctggta tttgtttagt cattcagata CD 151 gtcactggcg tttttttagc tatgcatTac acacctcatg tggatttagc CD 201 tttcaacagc gtagaacacg ttatgagaga tgttgaaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttTtcat tgtggttTac CD 301 cttcatattt ttcgtggtct atatTatgcg agttatagca gtcctaggga CD 351 atttgttTgg tgtctcggag ttgtaatctt cctattaatg attgtgacag CD 401 cttttaTagg atacgtacTa ccttggggtc agatgagctt ttggggagct CD 451 acagtaatta caagcttagc tagcgccata cctgtagtag gagataccat CD 501 agtgacttgg ctttggggtg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tcttcatTat ttactccccT ttattttagt aggcgccagt CD 601 cttcttcatc tggccgcatt gcatcaatat ggatcaaata atccattggg CD 651 tgtccattca gagatggata aaatttcttt ttacccttat ttttatgtaa CD 701 aggatctagt aggtTgggta gcttTtgcta tcttttTttc catttggatt CD 751 ttttatgctc ctaatgtttt ggggcatccc gacaattata tacctgctaa CD 801 tccgatgTcc accccgcctc atattgtgcc ggaatggtat ttcctaccga CD 851 tcTatgccat tcttcgtagt atacctgaca aatcgggagg tgtagccgca CD 901 atagcacTag tttttatatg tctgttggct ttaccttttt ttaaaagtat CD 951 gtatgtgcgt agttcaagtt ttcgaccgat tTaccaagga atattttggt CD 1001 tgcttttggc ggatTgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaggcaccat ttgttactat tggacaaatt TctTcttttg ttttcttctt CD 1101 gttctttgcc ataacgccca ttcTgggacg agttggaaga ggaattccta CD 1151 attcttacac ggatgagact gatcacacct ga SQ SEQUENCE 394 AA; MTIRNQRFSL LKQPISSTLN QHLIDYPTPS NLSYWWGFGS LAGICLVIQI VTGVFLAMHY TPHVDLAFNS VEHVMRDVEG GWLLRYMHAN GASMFFIVVY LHIFRGLYYA SYSSPREFVW CLGVVIFLLM IVTAFIGYVL PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNRFFSLHY LLPFILVGAS LLHLAALHQY GSNNPLGVHS EMDKISFYPY FYVKDLVGWV AFAIFFSIWI FYAPNVLGHP DNYIPANPMS TPPHIVPEWY FLPIYAILRS IPDKSGGVAA IALVFICLLA LPFFKSMYVR SSSFRPIYQG IFWLLLADCL LLGWIGCQPV EAPFVTIGQI SSFVFFLFFA ITPILGRVGR GIPNSYTDET DHT* // ID AY820131_1 STANDARD; PRT; 149 AA. AC AY820131; DT Tue Jul 21 07:03:55 2009 DE Daucus carota ribosomal protein S7 (rps7) and cytochrome oxidase OS mitochondrion Daucus carota (carrot) OC Daucus carota RN [1] RL Mol. Genet. Genomics 275 (1), 68-73 (2006) RL PUBMED 16362373 FT Full length CDS FT GENE : rps7 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAV68251.1 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1469 - 1915 FT DIRECTIONS : positive FT EDITING : 39 P(cCc) -> L(cTc) FT EDITING : 111 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 447 NT; CD 1 atgggggact tggatggtga gcaaaaacaa ttgatcaaga agttggtcaa CD 51 ctttcgcatg aaagaaggta aaaaaacaag agttcgtgct attgtttata CD 101 agactttgca tcgccCcggt cgaactgaac gcgatgtaat caaacttatg CD 151 gttgacgccc tagagaatat aaagcccata tgcaaagtgg aaagagtagg CD 201 aagagcaggt actatttatg atgtccctgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggacccttg aagcagcttt caaacgacgt CD 301 ataagctaca ggacaagctt agagcaatgt tCatttgatg agatactgga CD 351 tgcttaccga aagaggggaa ttgtacgtaa gaaaaggggg aatcttcata CD 401 gactggcttc caccaatcga agtatcgcgc atttcagatg gtggtaa FT EDITED CDNA CD 1 atgggggact tggatggtga gcaaaaacaa ttgatcaaga agttggtcaa CD 51 ctttcgcatg aaagaaggta aaaaaacaag agttcgtgct attgtttata CD 101 agactttgca tcgccTcggt cgaactgaac gcgatgtaat caaacttatg CD 151 gttgacgccc tagagaatat aaagcccata tgcaaagtgg aaagagtagg CD 201 aagagcaggt actatttatg atgtccctgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggacccttg aagcagcttt caaacgacgt CD 301 ataagctaca ggacaagctt agagcaatgt tTatttgatg agatactgga CD 351 tgcttaccga aagaggggaa ttgtacgtaa gaaaaggggg aatcttcata CD 401 gactggcttc caccaatcga agtatcgcgc atttcagatg gtggtaa SQ SEQUENCE 149 AA; MGDLDGEQKQ LIKKLVNFRM KEGKKTRVRA IVYKTLHRLG RTERDVIKLM VDALENIKPI CKVERVGRAG TIYDVPGIVA RDRQQTLAIR WTLEAAFKRR ISYRTSLEQC LFDEILDAYR KRGIVRKKRG NLHRLASTNR SIAHFRWW* // ID AY820131_2 STANDARD; PRT; 815 AA. AC AY820131; DT Tue Jul 21 07:03:55 2009 DE Daucus carota ribosomal protein S7 (rps7) and cytochrome oxidase OS mitochondrion Daucus carota (carrot) OC Daucus carota RN [1] RL Mol. Genet. Genomics 275 (1), 68-73 (2006) RL PUBMED 16362373 FT Full length CDS FT GENE : cox1 FT NOTE : version 2; C-terminal extension; cox1-2 FT LOCUS_TAG : FT PROTEIN_ID : AAV68252.1 FT PROTEIN_NAME : cytochrome oxidase subunit 1-2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2211 - 4655 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 4 P(cCg) -> L(cTg) FT EDITING : 5 V(gtC) -> V(gtT) FT EDITING : 81 S(tCt) -> F(tTt) FT EDITING : 85 S(tCt) -> F(tTt) FT EDITING : 118 P(Cca) -> S(Tca) FT EDITING : 148 S(tCa) -> L(tTa) FT EDITING : 151 S(tCt) -> F(tTt) FT EDITING : 153 P(cCt) -> L(cTt) FT EDITING : 172 S(tCc) -> F(tTc) FT EDITING : 184 S(tCa) -> L(tTa) FT EDITING : 197 P(cCa) -> L(cTa) FT EDITING : 223 S(tCt) -> F(tTt) FT EDITING : 239 R(Cgg) -> W(Tgg) FT EDITING : 249 P(cCc) -> L(cTc) FT EDITING : 254 S(tCc) -> F(tTc) FT EDITING : 346 S(tCc) -> F(tTc) FT EDITING : 360 P(cCg) -> L(cTg) FT EDITING : 396 H(Cac) -> Y(Tac) FT EDITING : 425 P(cCg) -> L(cTg) FT EDITING : 469 R(Cgt) -> C(Tgt) FT EDITING : 478 S(tCa) -> L(tTa) FT EDITING : 497 P(Cca) -> S(Tca) FT EDITING : 500 P(cCg) -> L(cTg) FT EDITING : 553 V(gtC) -> V(gtT) FT EDITING : 572 L(Cta) -> L(Tta) FT EDITING : 581 I(atC) -> I(atT) FT EDITING : 583 F(ttC) -> F(ttT) FT CODON_START : 1 CL CDNALEN 2445 NT; CD 1 aCgacaaatc CggtCcgatg gctgttctcc actaaccaca aagatatagg CD 51 gactctctat ttcatctttg gtgccattgc tggagtgatg ggcacatgct CD 101 tctcagtact gattcgtatg gaattagcac gacccggcga tcaaattctt CD 151 ggcgggaatc atcaacttta taatgtttta ataacggctc acgccttttt CD 201 aatgatcttt tttatggtta tgccggcgat gataggtgga tCtggtaatt CD 251 ggtCtgttcc gattctgata ggtgcgcctg acatggcatt tccacgatta CD 301 aataatattt cattctggtt gttgccacca agtctcttgc tcctattaag CD 351 cCcagcctta gtagaagtgg gtagcggcac tgggtggacg gtctatccgc CD 401 ccttaagtgg tattaccagc cattctggag gagcagttga ttCagcaatt CD 451 tCtagtcCtc atctatccgg tgtttcatcc attttaggtt ctatcaactt CD 501 tataacaact atctCcaaca tgcgtggacc tggaatgact atgcatagat CD 551 Cacccctatt tgtgtggtcc gttctagtga cagcattccC acttttatta CD 601 tcacttccgg tactggcagg ggcaattacc atgttattaa ccgatcgaaa CD 651 ctttaataca accttttCtg atcccgctgg agggggagac cccatattat CD 701 accagcatct ctttCggttc ttcggccatc cagaggtgta tattcCcatt CD 751 ctgcctggat Ccggtatcat aagtcatatc gtttctactt tttcgggaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgatc agtataggtg CD 851 ttcttggatt tcttgtttgg gctcatcata tgtttactgt gggcttagac CD 901 gttgataccc gtgcctactt caccgcagct accatgatca tagctgtccc CD 951 cactggaata aaaatattta gttggatcgc taccatgtgg gggggttcga CD 1001 tacaatacaa aacacccatg ttatttgctg tagggtCcat ctttttgttc CD 1051 accataggag gactcactgg aatagttcCg gcaaattctg ggctagacat CD 1101 tgctctacat gatacttatt atgtggttgc acatttccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ttatttgcag gatttCacta ttgggtaggt CD 1201 aaaatctttg gtcggacata tcctgaaact ttaggtcaaa tccatttttg CD 1251 gatcactttt ttcggggtga atcCgacctt ttttcccatg catttcttag CD 1301 ggctttcggg tatgccacgt cgcattccag attatccaga tgcttacgct CD 1351 ggatggaatg cccttagcag ttctggctct tatatatccg tagttgggat CD 1401 ttgtCgtttc ttcgtggtcg taacaatcac ttCaagcagt ggaaacaaca CD 1451 aaagatgcgc tccaagtcct tgggctgttg aacagaatCc aaacacacCg CD 1501 gaatggatga tacaaagtcc tccagctttt catacttttg gagaacttcc CD 1551 tgctatcaag gagacgaaag gcaatgtgaa aaaaaaaatt ggaaaaagaa CD 1601 gtatggaaag aaacatattc cattttttaa cttacagggg gactcccctt CD 1651 atgactgtCg tcctggcaga ttttttagta ccgaaatcaa tgataacagg CD 1701 tccaattttg attCtatttt gctttttcct tttgaccttt atCtttttCt CD 1751 tccatcgata tggtttacat aaaaaaaaaa atgaaggtct tacccttctc CD 1801 actattcttt atatttctat atatttttgt atctttttgt tcggatcttt CD 1851 tttccgtata tgcctctttt cccacgtggg tctggatttc tcctcctttt CD 1901 tttcactggt attgtgcgcg ggggctggtc aggagctccc agatcaacca CD 1951 accccttctt ccagcaatat ccactccgtc gctggcccgt cagaaataaa CD 2001 agcagagatt aaattcgaaa gaatggatca acaagatcaa atagcaccaa CD 2051 ttcaacaaga tcaaatagca ccaattcaac aagatcaaat agcaccaatt CD 2101 caacgaagca tcactacaga actagaccgt atagccgaga tacaaaaaag CD 2151 caattatgac cgcagcttta aaaatgcgga aacacacgaa cagcagatca CD 2201 taatacaaat gaaacaacga acaaacttct ccgatgtgga gataaaagtt CD 2251 gcagtggaaa atacgattga cgagatacgt caaggtccga atgtctatgc CD 2301 aaataatgcg aagatcaaaa agattttgac acagttaagt gatgatgccc CD 2351 aatgggagca cagttctgga tttcgcaaaa tagaaagcga aataaactat CD 2401 tttaataata ttgggaggaa caatggcgat gacggtgccg gctaa FT EDITED CDNA CD 1 aTgacaaatc TggtTcgatg gctgttctcc actaaccaca aagatatagg CD 51 gactctctat ttcatctttg gtgccattgc tggagtgatg ggcacatgct CD 101 tctcagtact gattcgtatg gaattagcac gacccggcga tcaaattctt CD 151 ggcgggaatc atcaacttta taatgtttta ataacggctc acgccttttt CD 201 aatgatcttt tttatggtta tgccggcgat gataggtgga tTtggtaatt CD 251 ggtTtgttcc gattctgata ggtgcgcctg acatggcatt tccacgatta CD 301 aataatattt cattctggtt gttgccacca agtctcttgc tcctattaag CD 351 cTcagcctta gtagaagtgg gtagcggcac tgggtggacg gtctatccgc CD 401 ccttaagtgg tattaccagc cattctggag gagcagttga ttTagcaatt CD 451 tTtagtcTtc atctatccgg tgtttcatcc attttaggtt ctatcaactt CD 501 tataacaact atctTcaaca tgcgtggacc tggaatgact atgcatagat CD 551 Tacccctatt tgtgtggtcc gttctagtga cagcattccT acttttatta CD 601 tcacttccgg tactggcagg ggcaattacc atgttattaa ccgatcgaaa CD 651 ctttaataca accttttTtg atcccgctgg agggggagac cccatattat CD 701 accagcatct ctttTggttc ttcggccatc cagaggtgta tattcTcatt CD 751 ctgcctggat Tcggtatcat aagtcatatc gtttctactt tttcgggaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgatc agtataggtg CD 851 ttcttggatt tcttgtttgg gctcatcata tgtttactgt gggcttagac CD 901 gttgataccc gtgcctactt caccgcagct accatgatca tagctgtccc CD 951 cactggaata aaaatattta gttggatcgc taccatgtgg gggggttcga CD 1001 tacaatacaa aacacccatg ttatttgctg tagggtTcat ctttttgttc CD 1051 accataggag gactcactgg aatagttcTg gcaaattctg ggctagacat CD 1101 tgctctacat gatacttatt atgtggttgc acatttccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ttatttgcag gatttTacta ttgggtaggt CD 1201 aaaatctttg gtcggacata tcctgaaact ttaggtcaaa tccatttttg CD 1251 gatcactttt ttcggggtga atcTgacctt ttttcccatg catttcttag CD 1301 ggctttcggg tatgccacgt cgcattccag attatccaga tgcttacgct CD 1351 ggatggaatg cccttagcag ttctggctct tatatatccg tagttgggat CD 1401 ttgtTgtttc ttcgtggtcg taacaatcac ttTaagcagt ggaaacaaca CD 1451 aaagatgcgc tccaagtcct tgggctgttg aacagaatTc aaacacacTg CD 1501 gaatggatga tacaaagtcc tccagctttt catacttttg gagaacttcc CD 1551 tgctatcaag gagacgaaag gcaatgtgaa aaaaaaaatt ggaaaaagaa CD 1601 gtatggaaag aaacatattc cattttttaa cttacagggg gactcccctt CD 1651 atgactgtTg tcctggcaga ttttttagta ccgaaatcaa tgataacagg CD 1701 tccaattttg attTtatttt gctttttcct tttgaccttt atTtttttTt CD 1751 tccatcgata tggtttacat aaaaaaaaaa atgaaggtct tacccttctc CD 1801 actattcttt atatttctat atatttttgt atctttttgt tcggatcttt CD 1851 tttccgtata tgcctctttt cccacgtggg tctggatttc tcctcctttt CD 1901 tttcactggt attgtgcgcg ggggctggtc aggagctccc agatcaacca CD 1951 accccttctt ccagcaatat ccactccgtc gctggcccgt cagaaataaa CD 2001 agcagagatt aaattcgaaa gaatggatca acaagatcaa atagcaccaa CD 2051 ttcaacaaga tcaaatagca ccaattcaac aagatcaaat agcaccaatt CD 2101 caacgaagca tcactacaga actagaccgt atagccgaga tacaaaaaag CD 2151 caattatgac cgcagcttta aaaatgcgga aacacacgaa cagcagatca CD 2201 taatacaaat gaaacaacga acaaacttct ccgatgtgga gataaaagtt CD 2251 gcagtggaaa atacgattga cgagatacgt caaggtccga atgtctatgc CD 2301 aaataatgcg aagatcaaaa agattttgac acagttaagt gatgatgccc CD 2351 aatgggagca cagttctgga tttcgcaaaa tagaaagcga aataaactat CD 2401 tttaataata ttgggaggaa caatggcgat gacggtgccg gctaa SQ SEQUENCE 815 AA; MTNLVRWLFS TNHKDIGTLY FIFGAIAGVM GTCFSVLIRM ELARPGDQIL GGNHQLYNVL ITAHAFLMIF FMVMPAMIGG FGNWFVPILI GAPDMAFPRL NNISFWLLPP SLLLLLSSAL VEVGSGTGWT VYPPLSGITS HSGGAVDLAI FSLHLSGVSS ILGSINFITT IFNMRGPGMT MHRLPLFVWS VLVTAFLLLL SLPVLAGAIT MLLTDRNFNT TFFDPAGGGD PILYQHLFWF FGHPEVYILI LPGFGIISHI VSTFSGKPVF GYLGMVYAMI SIGVLGFLVW AHHMFTVGLD VDTRAYFTAA TMIIAVPTGI KIFSWIATMW GGSIQYKTPM LFAVGFIFLF TIGGLTGIVL ANSGLDIALH DTYYVVAHFH YVLSMGAVFA LFAGFYYWVG KIFGRTYPET LGQIHFWITF FGVNLTFFPM HFLGLSGMPR RIPDYPDAYA GWNALSSSGS YISVVGICCF FVVVTITLSS GNNKRCAPSP WAVEQNSNTL EWMIQSPPAF HTFGELPAIK ETKGNVKKKI GKRSMERNIF HFLTYRGTPL MTVVLADFLV PKSMITGPIL ILFCFFLLTF IFFFHRYGLH KKKNEGLTLL TILYISIYFC IFLFGSFFRI CLFSHVGLDF SSFFSLVLCA GAGQELPDQP TPSSSNIHSV AGPSEIKAEI KFERMDQQDQ IAPIQQDQIA PIQQDQIAPI QRSITTELDR IAEIQKSNYD RSFKNAETHE QQIIIQMKQR TNFSDVEIKV AVENTIDEIR QGPNVYANNA KIKKILTQLS DDAQWEHSSG FRKIESEINY FNNIGRNNGD DGAG* // ID AY973491_1 STANDARD; PRT; 495 AA. AC AY973491; DT Tue Jul 21 07:04:06 2009 DE Zea mays cytochrome c oxidase subunit I (cox1) mRNA, partial cds; OS mitochondrion Zea mays OC Zea mays RN [1] RL Unpublished FT C-terminal not determined FT GENE : cox1 FT NOTE : COXI FT LOCUS_TAG : FT PROTEIN_ID : AAX99137.1 FT PROTEIN_NAME : cytochrome c oxidase subunit I FT EVIDENCE : FT EXCEPTION : FT REGIONS : 140 - 1624 FT DIRECTIONS : positive FT EDITING : 5 V(gtC) -> V(gtT) FT EDITING : 468 R(Cgt) -> C(Tgt) FT EDITING : 469 R(Cgt) -> C(Tgt) FT EDITING : 478 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1485 NT; CD 1 atgacaaatc tggtCcgatg gctcttctcc actaaccaca aggatatcgg CD 51 tactctatat ttcatcttcg gtgccattgc aggagtgatg ggcacatgct CD 101 tctccgtact gattcgtatg gaattagccc gacccggcga tcaaattctt CD 151 ggtgggaatc atcaacttta taatgtttta ataacggctc acgctttttt CD 201 aatgatcttt tttatggtta tgccggcgat gataggtgga tttgggaatt CD 251 ggtttgttcc gattctgata ggtgcacctg acatggcatt tccacgatta CD 301 aataatatat cattctggtt gttgccacca agtctcttgc tcctattaag CD 351 ctcagcctta gtagaagtgg gcagcggcac tgggtggacg gtctatccgc CD 401 ccttaagtgg tattaccagc cattctggag gagcagttga tttagcaatt CD 451 tttagtcttc atctatcagg tgtttcatca attttaggtt ctatcaattt CD 501 tataactact atcttcaaca tgcgtggacc tggaatgact atgcatagat CD 551 taccactttt tgtgtggtcc gttttagtga cagcattcct acttttatta CD 601 tcacttccgg tactggcagg ggcaattaca atgttattaa ccgatcgaaa CD 651 ctttaataca accttttttg atccagcagg agggggagac ccaatattat CD 701 accagcatct cttttggttc ttcggtcatc cagaggtgta tattctcatt CD 751 ctgcctggat tcggtattat tagtcatatc gtatcgacct tttcaagaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgata agtataggtg CD 851 ttcttggatt tctagtttgg gctcatcata tgtttactgt gggcttagac CD 901 gttgatacgc gtgcctactt caccgcagct accatgatca tagctgtgcc CD 951 cactggaatc aaaatcttta gttggatcgc taccatgtgg ggaggttcga CD 1001 tacaatacaa aacacccatg ttatttgctg tagggttcat ctttttgttc CD 1051 accataggag ggctcactgg aatagttcta gcaaactctg ggctagacat CD 1101 tgctctacat gatacttatt atgtggttgc acatttccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ttatttgctg gattttacta ttgggtgggt CD 1201 aaaatctttg gtcggacata tcctgaaact ttaggccaaa tccatttttg CD 1251 gatcactttt ttcggggtta atctgacctt ctttcccatg catttcttag CD 1301 ggctttcggg tatgccacgt cgcattccag attatccaga tgcttacgcc CD 1351 ggatggaatg ctctgagcag tttcggttct tatatatccg tagttgggat CD 1401 tCgtCgtttc ttcgtagttg tcgcaatcac ttCaagcagt ggaaagaaca CD 1451 aaagatgtgc ggaaagtcct tgggctgttg agcag FT EDITED CDNA CD 1 atgacaaatc tggtTcgatg gctcttctcc actaaccaca aggatatcgg CD 51 tactctatat ttcatcttcg gtgccattgc aggagtgatg ggcacatgct CD 101 tctccgtact gattcgtatg gaattagccc gacccggcga tcaaattctt CD 151 ggtgggaatc atcaacttta taatgtttta ataacggctc acgctttttt CD 201 aatgatcttt tttatggtta tgccggcgat gataggtgga tttgggaatt CD 251 ggtttgttcc gattctgata ggtgcacctg acatggcatt tccacgatta CD 301 aataatatat cattctggtt gttgccacca agtctcttgc tcctattaag CD 351 ctcagcctta gtagaagtgg gcagcggcac tgggtggacg gtctatccgc CD 401 ccttaagtgg tattaccagc cattctggag gagcagttga tttagcaatt CD 451 tttagtcttc atctatcagg tgtttcatca attttaggtt ctatcaattt CD 501 tataactact atcttcaaca tgcgtggacc tggaatgact atgcatagat CD 551 taccactttt tgtgtggtcc gttttagtga cagcattcct acttttatta CD 601 tcacttccgg tactggcagg ggcaattaca atgttattaa ccgatcgaaa CD 651 ctttaataca accttttttg atccagcagg agggggagac ccaatattat CD 701 accagcatct cttttggttc ttcggtcatc cagaggtgta tattctcatt CD 751 ctgcctggat tcggtattat tagtcatatc gtatcgacct tttcaagaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgata agtataggtg CD 851 ttcttggatt tctagtttgg gctcatcata tgtttactgt gggcttagac CD 901 gttgatacgc gtgcctactt caccgcagct accatgatca tagctgtgcc CD 951 cactggaatc aaaatcttta gttggatcgc taccatgtgg ggaggttcga CD 1001 tacaatacaa aacacccatg ttatttgctg tagggttcat ctttttgttc CD 1051 accataggag ggctcactgg aatagttcta gcaaactctg ggctagacat CD 1101 tgctctacat gatacttatt atgtggttgc acatttccat tatgtacttt CD 1151 ctatgggagc cgtttttgct ttatttgctg gattttacta ttgggtgggt CD 1201 aaaatctttg gtcggacata tcctgaaact ttaggccaaa tccatttttg CD 1251 gatcactttt ttcggggtta atctgacctt ctttcccatg catttcttag CD 1301 ggctttcggg tatgccacgt cgcattccag attatccaga tgcttacgcc CD 1351 ggatggaatg ctctgagcag tttcggttct tatatatccg tagttgggat CD 1401 tTgtTgtttc ttcgtagttg tcgcaatcac ttTaagcagt ggaaagaaca CD 1451 aaagatgtgc ggaaagtcct tgggctgttg agcag SQ SEQUENCE 495 AA; MTNLVRWLFS TNHKDIGTLY FIFGAIAGVM GTCFSVLIRM ELARPGDQIL GGNHQLYNVL ITAHAFLMIF FMVMPAMIGG FGNWFVPILI GAPDMAFPRL NNISFWLLPP SLLLLLSSAL VEVGSGTGWT VYPPLSGITS HSGGAVDLAI FSLHLSGVSS ILGSINFITT IFNMRGPGMT MHRLPLFVWS VLVTAFLLLL SLPVLAGAIT MLLTDRNFNT TFFDPAGGGD PILYQHLFWF FGHPEVYILI LPGFGIISHI VSTFSRKPVF GYLGMVYAMI SIGVLGFLVW AHHMFTVGLD VDTRAYFTAA TMIIAVPTGI KIFSWIATMW GGSIQYKTPM LFAVGFIFLF TIGGLTGIVL ANSGLDIALH DTYYVVAHFH YVLSMGAVFA LFAGFYYWVG KIFGRTYPET LGQIHFWITF FGVNLTFFPM HFLGLSGMPR RIPDYPDAYA GWNALSSFGS YISVVGICCF FVVVAITLSS GKNKRCAESP WAVEQ // ID AY973492_1 STANDARD; PRT; 261 AA. AC AY973492; DT Tue Jul 21 07:04:06 2009 DE Zea mays cytochrome c oxidase subunit II (cox2) mRNA, complete cds; OS mitochondrion Zea mays OC Zea mays RN [1] RL Unpublished FT Full length CDS FT GENE : cox2 FT NOTE : COX2 FT LOCUS_TAG : FT PROTEIN_ID : AAX99138.1 FT PROTEIN_NAME : cytochrome c oxidase subunit II FT EVIDENCE : FT EXCEPTION : FT REGIONS : 222 - 1004 FT DIRECTIONS : positive FT EDITING : 5 S(tCa) -> L(tTa) FT EDITING : 10 F(ttC) -> F(ttT) FT EDITING : 11 L(Ctc) -> F(Ttc) FT EDITING : 26 S(tCt) -> F(tTt) FT EDITING : 48 L(ctC) -> L(ctT) FT EDITING : 54 F(ttC) -> F(ttT) FT EDITING : 56 S(tCa) -> L(tTa) FT EDITING : 57 R(Cgg) -> W(Tgg) FT EDITING : 87 R(Cgg) -> W(Tgg) FT EDITING : 95 P(cCa) -> L(cTa) FT EDITING : 129 R(Cgg) -> W(Tgg) FT EDITING : 150 T(aCg) -> M(aTg) FT EDITING : 156 P(CCa) -> L(TTa) FT EDITING : 161 S(tCa) -> L(tTa) FT EDITING : 184 P(Ccc) -> S(Tcc) FT EDITING : 188 P(cCt) -> L(cTt) FT EDITING : 196 S(tCa) -> L(tTa) FT EDITING : 207 S(tCa) -> L(tTa) FT EDITING : 213 S(tCg) -> L(tTg) FT EDITING : 235 T(aCg) -> M(aTg) FT EDITING : 237 I(atC) -> I(atT) FT CODON_START : 1 CL CDNALEN 783 NT; CD 1 atgattcttc gttCattaga atgtcgattC Ctcacaatcg ctctttgtga CD 51 tgctgcggaa ccatggcaat taggatCtca agacgcagca acacctatga CD 101 tgcaaggaat cattgactta catcacgata tctttttctt cctCattctg CD 151 attttggttt tCgtatCaCg gatgttggtt cgcgctttat ggcatttcaa CD 201 cgagcaaact aatccaatcc cgcaaaggat tgttcatgga actactatcg CD 251 aaattattCg gaccattttt cctagtgtca ttcCattgtt cattgctata CD 301 ccatcgtttg ctctgttata ctcaatggac ggggtattag tagatccagc CD 351 cattactatc aaagctattg gacatcaatg gtatCggact tatgagtatt CD 401 cggactataa cagttccgat gaacagtcac tcacttttga cagttataCg CD 451 attccagaag atgatCCaga attgggtcaa tCacgtttat tagaagttga CD 501 caatagagtg gttgtaccag ccaaaactca tctacgtatg attgtaacaC CD 551 ccgctgatgt acCtcatagt tgggctgtac cttcctCagg tgtcaaatgt CD 601 gatgctgtac ctggtcgttC aaatcttacc tccatctCgg tacaacgaga CD 651 aggagtttac tatggtcagt gcagtgagat ttgtggaact aatcatgcct CD 701 ttaCgcctat Cgtcgtagaa gcagtgactt tgaaagatta tgcggattgg CD 751 gtatccaatc aattaatcct ccaaaccaac taa FT EDITED CDNA CD 1 atgattcttc gttTattaga atgtcgattT Ttcacaatcg ctctttgtga CD 51 tgctgcggaa ccatggcaat taggatTtca agacgcagca acacctatga CD 101 tgcaaggaat cattgactta catcacgata tctttttctt cctTattctg CD 151 attttggttt tTgtatTaTg gatgttggtt cgcgctttat ggcatttcaa CD 201 cgagcaaact aatccaatcc cgcaaaggat tgttcatgga actactatcg CD 251 aaattattTg gaccattttt cctagtgtca ttcTattgtt cattgctata CD 301 ccatcgtttg ctctgttata ctcaatggac ggggtattag tagatccagc CD 351 cattactatc aaagctattg gacatcaatg gtatTggact tatgagtatt CD 401 cggactataa cagttccgat gaacagtcac tcacttttga cagttataTg CD 451 attccagaag atgatTTaga attgggtcaa tTacgtttat tagaagttga CD 501 caatagagtg gttgtaccag ccaaaactca tctacgtatg attgtaacaT CD 551 ccgctgatgt acTtcatagt tgggctgtac cttcctTagg tgtcaaatgt CD 601 gatgctgtac ctggtcgttT aaatcttacc tccatctTgg tacaacgaga CD 651 aggagtttac tatggtcagt gcagtgagat ttgtggaact aatcatgcct CD 701 ttaTgcctat Tgtcgtagaa gcagtgactt tgaaagatta tgcggattgg CD 751 gtatccaatc aattaatcct ccaaaccaac taa SQ SEQUENCE 261 AA; MILRLLECRF FTIALCDAAE PWQLGFQDAA TPMMQGIIDL HHDIFFFLIL ILVFVLWMLV RALWHFNEQT NPIPQRIVHG TTIEIIWTIF PSVILLFIAI PSFALLYSMD GVLVDPAITI KAIGHQWYWT YEYSDYNSSD EQSLTFDSYM IPEDDLELGQ LRLLEVDNRV VVPAKTHLRM IVTSADVLHS WAVPSLGVKC DAVPGRLNLT SILVQREGVY YGQCSEICGT NHAFMPIVVE AVTLKDYADW VSNQLILQTN * // ID BA000009_2 STANDARD; PRT; 193 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : nad9 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99286.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 34 - 612 FT DIRECTIONS : positive FT EDITING : 31 S(tCt) -> F(tTt) FT EDITING : 38 P(cCa) -> L(cTa) FT EDITING : 100 P(cCg) -> L(cTg) FT EDITING : 110 R(Cgg) -> W(Tgg) FT EDITING : 123 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 579 NT; CD 1 atggataacc aattcatttt caaatatagt tgggagactt tacccaagaa CD 51 atgggtcaaa aaaatagaaa aatcagaaca tgggaataga tCtgatacca CD 101 atacggacta ccCatttcaa ttgttgtgct ttcttaaatt gcatacctat CD 151 acaaggtttc aagttttgat cgatatttgc ggagttgatt atccttctcg CD 201 aaaacgaaga tttgaagtgg tctataattt actgagtact cggtataatt CD 251 cgcgcattcg gctacaaacc tgtgcagacg aagtaacacg aatatctcCg CD 301 gtagtcagtc tatttccatc agctggcCgg tgggagcgag aagtttggga CD 351 tatgtttggt gtttcttCca tcaatcatcc ggatctacgc cgtatattaa CD 401 cagattatgg tttcgagggt catccattac gaaaagactt tcctctgagt CD 451 ggatatgtag aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 gcccattgag atgacccaag aatttcgcta tttcgatttt gctagtcctt CD 551 gggaacaacg taacggtaac gaaggataa FT EDITED CDNA CD 1 atggataacc aattcatttt caaatatagt tgggagactt tacccaagaa CD 51 atgggtcaaa aaaatagaaa aatcagaaca tgggaataga tTtgatacca CD 101 atacggacta ccTatttcaa ttgttgtgct ttcttaaatt gcatacctat CD 151 acaaggtttc aagttttgat cgatatttgc ggagttgatt atccttctcg CD 201 aaaacgaaga tttgaagtgg tctataattt actgagtact cggtataatt CD 251 cgcgcattcg gctacaaacc tgtgcagacg aagtaacacg aatatctcTg CD 301 gtagtcagtc tatttccatc agctggcTgg tgggagcgag aagtttggga CD 351 tatgtttggt gtttcttTca tcaatcatcc ggatctacgc cgtatattaa CD 401 cagattatgg tttcgagggt catccattac gaaaagactt tcctctgagt CD 451 ggatatgtag aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 gcccattgag atgacccaag aatttcgcta tttcgatttt gctagtcctt CD 551 gggaacaacg taacggtaac gaaggataa SQ SEQUENCE 193 AA; MDNQFIFKYS WETLPKKWVK KIEKSEHGNR FDTNTDYLFQ LLCFLKLHTY TRFQVLIDIC GVDYPSRKRR FEVVYNLLST RYNSRIRLQT CADEVTRISL VVSLFPSAGW WEREVWDMFG VSFINHPDLR RILTDYGFEG HPLRKDFPLS GYVEVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRNGN EG* // ID BA000009_15 STANDARD; PRT; 578 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : ccb577 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99299.2 FT PROTEIN_NAME : cytochrome c biogenesis protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 33147 - 34880 FT DIRECTIONS : positive FT EDITING : 13 P(cCg) -> L(cTg) FT EDITING : 33 P(cCt) -> L(cTt) FT EDITING : 51 P(Cct) -> S(Tct) FT EDITING : 86 R(Cgg) -> W(Tgg) FT EDITING : 88 P(cCa) -> L(cTa) FT EDITING : 95 L(Ctt) -> F(Ttt) FT EDITING : 151 F(ttC) -> F(ttT) FT EDITING : 187 L(Ctt) -> F(Ttt) FT EDITING : 236 P(cCt) -> L(cTt) FT EDITING : 239 S(tCa) -> L(tTa) FT EDITING : 252 R(Cgt) -> C(Tgt) FT EDITING : 259 S(tCa) -> L(tTa) FT EDITING : 263 P(cCa) -> L(cTa) FT EDITING : 268 S(tCa) -> L(tTa) FT EDITING : 424 R(Cgg) -> W(Tgg) FT EDITING : 433 P(cCa) -> L(cTa) FT EDITING : 439 H(Cat) -> Y(Tat) FT EDITING : 444 R(Cgg) -> W(Tgg) FT EDITING : 450 R(Cgg) -> W(Tgg) FT EDITING : 461 R(Cgg) -> W(Tgg) FT EDITING : 467 R(Cgt) -> C(Tgt) FT EDITING : 482 L(Ctt) -> F(Ttt) FT EDITING : 505 P(Ccc) -> S(Tcc) FT CODON_START : 1 CL CDNALEN 1734 NT; CD 1 atgtcaatat atgaattgtt tcattattcg ttatttcCgg gccttttcat CD 51 tgcattcact tacaacaaga aacaaccacc agcgtttggt gcagcacCtg CD 101 cgttttggtg tattcttctt tctttccttg gtcttttgtt ctgtcatatt CD 151 Cctaataact tatccaatta caacatatta accgctaatg cacctttctt CD 201 ttatcaaatc tcagggacat ggtctaatca tgaaggtagt attttattat CD 251 ggtgtCggat ccCaagtttt tatggattcc ttCtttgtta ccggggtcga CD 301 tcccaaagcc ataatgtctc aaaacgagga ggccatagag aaagtcttct CD 351 tttttccttt gtcttaaact tcgtgaagaa ctccattcta tctcttcctc CD 401 gttacgaaca aaaaagtaga gttcttcacg aaccccagtt gtacactctc CD 451 ttCgttctac gaactcttgt tgattctgaa ctttgttcgc gaaggaaccg CD 501 gacttttgac gggccagctc ttttttacgt ttaccctgaa aggaaaatga CD 551 gctttgctCt tctgggcgct aggcgctctc gtggttcgcg agaaggaaaa CD 601 aggactcatc ctttgttgca tctggcacga gatgataaag agagagcttc CD 651 gtctatcgat gaacagcgga ttgacggagc tcttggcatt gctttctttt CD 701 tctttcCttt cctatCagcg agttccgatc cttttgttcg aaatttcttc CD 751 gttCgtaccg aaccgcttgc agaatCaaat cctgttcCac aagatcctat CD 801 atCagctata catcctcctt gcatttatgc cggagacgtc gccagtgcta CD 851 tgggctttgg cttatgtaga tcaaaaatga tgaatgggat tgtggcactc CD 901 cactcgccgc caatgcggaa ggatgtcgcc gaaaagaatg gaacgctgct CD 951 ttgctctgct ggatgcgtcg gatcccgtat aacaagcgag ctctttaccc CD 1001 ttaaattcaa acatgtgggc gccaaatgct atcctgctct attgttgcgt CD 1051 agcaaaagaa gcctgctcat gctgcttcgg cggcgctttt tcgccttctc CD 1101 ttcgctctgg acaagagcgc tagtggacac ggggagggag cgggcgaagc CD 1151 gtttctttcg taatggaaag aaaaagacca ctactttgcc tctttgttgg CD 1201 accgccggcg cgaacacagt ggtctctgac caggaccagg aaccaattcg CD 1251 aatttggatc ttgacatgtC ggtgcttttt aaccgtaggc atcttgcCag CD 1301 gaagttggtg ggctCatcat gaattaggtC ggggtggctg gtggtttCgg CD 1351 gatcccgtag aaaatgcttc ttttatgcct Cgggtattag ccacagctCg CD 1401 tattcattca gtcattttac cccttcttca ttcttggact ttgCttctta CD 1451 atattgtgac ttttctatgc tgtgtcttag gaaccttttc aatacggtcc CD 1501 ggattgctag ctCccgttca tagttttgct acagatgata cacgaggaat CD 1551 ctttttatgg cggttcttcc ttctaatgac cggcatatct atgattcttt CD 1601 tctctcagat gaagcagcag gcatcggtcc gtagaaccta taaaaaagag CD 1651 atggttgtag cgcgaagtac tcttgtgcac ttacgtcact tggctcgcgc CD 1701 gcaacctcgc ccccttatgt tatggaagaa ttga FT EDITED CDNA CD 1 atgtcaatat atgaattgtt tcattattcg ttatttcTgg gccttttcat CD 51 tgcattcact tacaacaaga aacaaccacc agcgtttggt gcagcacTtg CD 101 cgttttggtg tattcttctt tctttccttg gtcttttgtt ctgtcatatt CD 151 Tctaataact tatccaatta caacatatta accgctaatg cacctttctt CD 201 ttatcaaatc tcagggacat ggtctaatca tgaaggtagt attttattat CD 251 ggtgtTggat ccTaagtttt tatggattcc ttTtttgtta ccggggtcga CD 301 tcccaaagcc ataatgtctc aaaacgagga ggccatagag aaagtcttct CD 351 tttttccttt gtcttaaact tcgtgaagaa ctccattcta tctcttcctc CD 401 gttacgaaca aaaaagtaga gttcttcacg aaccccagtt gtacactctc CD 451 ttTgttctac gaactcttgt tgattctgaa ctttgttcgc gaaggaaccg CD 501 gacttttgac gggccagctc ttttttacgt ttaccctgaa aggaaaatga CD 551 gctttgctTt tctgggcgct aggcgctctc gtggttcgcg agaaggaaaa CD 601 aggactcatc ctttgttgca tctggcacga gatgataaag agagagcttc CD 651 gtctatcgat gaacagcgga ttgacggagc tcttggcatt gctttctttt CD 701 tctttcTttt cctatTagcg agttccgatc cttttgttcg aaatttcttc CD 751 gttTgtaccg aaccgcttgc agaatTaaat cctgttcTac aagatcctat CD 801 atTagctata catcctcctt gcatttatgc cggagacgtc gccagtgcta CD 851 tgggctttgg cttatgtaga tcaaaaatga tgaatgggat tgtggcactc CD 901 cactcgccgc caatgcggaa ggatgtcgcc gaaaagaatg gaacgctgct CD 951 ttgctctgct ggatgcgtcg gatcccgtat aacaagcgag ctctttaccc CD 1001 ttaaattcaa acatgtgggc gccaaatgct atcctgctct attgttgcgt CD 1051 agcaaaagaa gcctgctcat gctgcttcgg cggcgctttt tcgccttctc CD 1101 ttcgctctgg acaagagcgc tagtggacac ggggagggag cgggcgaagc CD 1151 gtttctttcg taatggaaag aaaaagacca ctactttgcc tctttgttgg CD 1201 accgccggcg cgaacacagt ggtctctgac caggaccagg aaccaattcg CD 1251 aatttggatc ttgacatgtT ggtgcttttt aaccgtaggc atcttgcTag CD 1301 gaagttggtg ggctTatcat gaattaggtT ggggtggctg gtggtttTgg CD 1351 gatcccgtag aaaatgcttc ttttatgcct Tgggtattag ccacagctTg CD 1401 tattcattca gtcattttac cccttcttca ttcttggact ttgTttctta CD 1451 atattgtgac ttttctatgc tgtgtcttag gaaccttttc aatacggtcc CD 1501 ggattgctag ctTccgttca tagttttgct acagatgata cacgaggaat CD 1551 ctttttatgg cggttcttcc ttctaatgac cggcatatct atgattcttt CD 1601 tctctcagat gaagcagcag gcatcggtcc gtagaaccta taaaaaagag CD 1651 atggttgtag cgcgaagtac tcttgtgcac ttacgtcact tggctcgcgc CD 1701 gcaacctcgc ccccttatgt tatggaagaa ttga SQ SEQUENCE 578 AA; MSIYELFHYS LFLGLFIAFT YNKKQPPAFG AALAFWCILL SFLGLLFCHI SNNLSNYNIL TANAPFFYQI SGTWSNHEGS ILLWCWILSF YGFLFCYRGR SQSHNVSKRG GHRESLLFSF VLNFVKNSIL SLPRYEQKSR VLHEPQLYTL FVLRTLVDSE LCSRRNRTFD GPALFYVYPE RKMSFAFLGA RRSRGSREGK RTHPLLHLAR DDKERASSID EQRIDGALGI AFFFFLFLLA SSDPFVRNFF VCTEPLAELN PVLQDPILAI HPPCIYAGDV ASAMGFGLCR SKMMNGIVAL HSPPMRKDVA EKNGTLLCSA GCVGSRITSE LFTLKFKHVG AKCYPALLLR SKRSLLMLLR RRFFAFSSLW TRALVDTGRE RAKRFFRNGK KKTTTLPLCW TAGANTVVSD QDQEPIRIWI LTCWCFLTVG ILLGSWWAYH ELGWGGWWFW DPVENASFMP WVLATACIHS VILPLLHSWT LFLNIVTFLC CVLGTFSIRS GLLASVHSFA TDDTRGIFLW RFFLLMTGIS MILFSQMKQQ ASVRRTYKKE MVVARSTLVH LRHLARAQPR PLMLWKN* // ID BA000009_16 STANDARD; PRT; 439 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : ccb438 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99300.2 FT PROTEIN_NAME : cytochrome c biogenesis protein FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 256/2 FT EDITING : 13 S(tCc) -> F(tTc) FT EDITING : 17 P(cCt) -> L(cTt) FT EDITING : 41 S(tCC) -> F(tTT) FT EDITING : 51 P(Cct) -> S(Tct) FT EDITING : 52 S(tCa) -> L(tTa) FT EDITING : 59 L(Cta) -> L(Tta) FT EDITING : 104 R(Cgt) -> C(Tgt) FT EDITING : 131 R(Cgt) -> C(Tgt) FT EDITING : 136 R(Cgt) -> C(Tgt) FT CODON_START : 1 CL CDNALEN 1317 NT; CD 1 atggtccaac tacataactt tttctttttc attacttCca tggtcgtgcC CD 51 ttgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 tttccacagg tgcccctttt tCCaatggta ctttaattcc tattcttatc CD 151 CcttCattcc ttcttttggt ttatCtacat tccaggaaat tcatacgctc CD 201 tatggacgga gtaaaaagtg gagtcttggt cagagcaagt tgccctattt CD 251 tattaccaga cataattggg agaagctcat ccgaaactag agctagaaac CD 301 gccttatttC gtttcgttcc cattcttcat tttcttcttc tcgaattcaa CD 351 gggggacttc ccctatttag aatctttttg cggtgtgctc Cgtttactat CD 401 tctttCgtac tttcttctct ttaccacgcg ataggtcagc gaagcgtgag CD 451 cgggcgcgga gaagagaagg ccaaacactt cggcctaacg ggaatgagca CD 501 acgacgaaat gaaaagagaa agtgccccgg gcgcccccat ttagaaagaa CD 551 gggtcgaagg gtttgggcct gtagctttcc ccgtcccccc ttcgtcgggt CD 601 ggtgcttgca tggggggtgt gctacctgaa atcgggcttg aagctcccgc CD 651 cttaccaacg agccgacagc tgatggctgt tggtcacgac tactaccaaa CD 701 aggtgaacat gaagatgaat atttcacatg ggggagtgtg catctttatg CD 751 ttgggtgttc ttctgtctaa cacaaagaag atacagttca ctcaacgatt CD 801 gcctttgggt tccgaactcc atatggggaa ggaacgttgt tgtttgcggg CD 851 gtctcgatca tttacatgga cccacttttc attccatttg tgggaatttg CD 901 atgatctata aaccgtcctt aacgaacgat cggctcatct ttgagcatga CD 951 tgaatcactt cgtgccgacc tgttgtcaat aaacttttgg gcctcatatg CD 1001 agaatggaaa actggagcat tttctgcatc ggtggatgaa gaatcgcgaa CD 1051 catccaaatt tctggttaag catgttccca gaaaaaagat actttcgaga CD 1101 aacaacgagc acgactgaag tggctatcca tacaaatcca tttacggatc CD 1151 tatatgcttc gattggaact ggaagttcaa gaacaggcgg ctggtatact CD 1201 accataatga aactgccttt tctttttttt attcggatag gatttctgtt CD 1251 ggcttcgctg ggaggctcgc gtagtttgtt acgtcaactc caaaaggaga CD 1301 aattgcgttg gaattga FT EDITED CDNA CD 1 atggtccaac tacataactt tttctttttc attacttTca tggtcgtgcT CD 51 ttgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 tttccacagg tgcccctttt tTTaatggta ctttaattcc tattcttatc CD 151 TcttTattcc ttcttttggt ttatTtacat tccaggaaat tcatacgctc CD 201 tatggacgga gtaaaaagtg gagtcttggt cagagcaagt tgccctattt CD 251 tattaccaga cataattggg agaagctcat ccgaaactag agctagaaac CD 301 gccttatttT gtttcgttcc cattcttcat tttcttcttc tcgaattcaa CD 351 gggggacttc ccctatttag aatctttttg cggtgtgctc Tgtttactat CD 401 tctttTgtac tttcttctct ttaccacgcg ataggtcagc gaagcgtgag CD 451 cgggcgcgga gaagagaagg ccaaacactt cggcctaacg ggaatgagca CD 501 acgacgaaat gaaaagagaa agtgccccgg gcgcccccat ttagaaagaa CD 551 gggtcgaagg gtttgggcct gtagctttcc ccgtcccccc ttcgtcgggt CD 601 ggtgcttgca tggggggtgt gctacctgaa atcgggcttg aagctcccgc CD 651 cttaccaacg agccgacagc tgatggctgt tggtcacgac tactaccaaa CD 701 aggtgaacat gaagatgaat atttcacatg ggggagtgtg catctttatg CD 751 ttgggtgttc ttctgtctaa cacaaagaag atacagttca ctcaacgatt CD 801 gcctttgggt tccgaactcc atatggggaa ggaacgttgt tgtttgcggg CD 851 gtctcgatca tttacatgga cccacttttc attccatttg tgggaatttg CD 901 atgatctata aaccgtcctt aacgaacgat cggctcatct ttgagcatga CD 951 tgaatcactt cgtgccgacc tgttgtcaat aaacttttgg gcctcatatg CD 1001 agaatggaaa actggagcat tttctgcatc ggtggatgaa gaatcgcgaa CD 1051 catccaaatt tctggttaag catgttccca gaaaaaagat actttcgaga CD 1101 aacaacgagc acgactgaag tggctatcca tacaaatcca tttacggatc CD 1151 tatatgcttc gattggaact ggaagttcaa gaacaggcgg ctggtatact CD 1201 accataatga aactgccttt tctttttttt attcggatag gatttctgtt CD 1251 ggcttcgctg ggaggctcgc gtagtttgtt acgtcaactc caaaaggaga CD 1301 aattgcgttg gaattga SQ SEQUENCE 439 AA; MVQLHNFFFF ITFMVVLCGT AAPVLLKWFV SRDVSTGAPF FNGTLIPILI SLFLLLVYLH SRKFIRSMDG VKSGVLVRAS CPILLPDIIG RSSSETRARN ALFCFVPILH FLLLEFKGDF PYLESFCGVL CLLFFCTFFS LPRDRSAKRE RARRREGQTL RPNGNEQRRN EKRKCPGRPH LERRVEGFGP VAFPVPPSSG GACMGGVLPE IGLEAPALPT SRQLMAVGHD YYQKVNMKMN ISHGGVCIFM LGVLLSNTKK IQFTQRLPLG SELHMGKERC CLRGLDHLHG PTFHSICGNL MIYKPSLTND RLIFEHDESL RADLLSINFW ASYENGKLEH FLHRWMKNRE HPNFWLSMFP EKRYFRETTS TTEVAIHTNP FTDLYASIGT GSSRTGGWYT TIMKLPFLFF IRIGFLLASL GGSRSLLRQL QKEKLRWN* // ID BA000009_17 STANDARD; PRT; 190 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : orf189 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA99301.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 38583 - 39152 FT DIRECTIONS : positive FT EDITING : 131 P(cCa) -> L(cTa) FT EDITING : 138 S(tCg) -> L(tTg) FT EDITING : 163 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 570 NT; CD 1 atggtgcggc ttaggtcaac taacacaaag aagatacagt tcactcaacg CD 51 attgcctttg ggttccgaac tccatatggg gaaggaacgt tgttgtttgc CD 101 ggggtctcga tcatttacat ggacccactt ttcattccat ttgtgggaat CD 151 ttgatgatct ataaaccgtc cttaacgaac gatcggctca tctttgagca CD 201 tgatgaatca cttcgtgccg acctgttgtc aataaacttt tgggcctcat CD 251 atgagaatgg aaaactggag cattttctgc atcggtggat gaagaatcgc CD 301 gaacatccaa atttctggtt aagcatgttc ccagaaaaaa gatactttcg CD 351 agaaacaacg agcacgactg aagtggctat ccatacaaat cCatttacgg CD 401 atctatatgc ttCgattgga actggaagtt caagaacagg cggctggtat CD 451 actaccataa tgaaactgcc ttttcttttt tttattCgga taggatttct CD 501 gttggcttcg ctgggaggct cgcgtagttt gttacgtcaa ctccaaaagg CD 551 agaaattgcg ttggaattga FT EDITED CDNA CD 1 atggtgcggc ttaggtcaac taacacaaag aagatacagt tcactcaacg CD 51 attgcctttg ggttccgaac tccatatggg gaaggaacgt tgttgtttgc CD 101 ggggtctcga tcatttacat ggacccactt ttcattccat ttgtgggaat CD 151 ttgatgatct ataaaccgtc cttaacgaac gatcggctca tctttgagca CD 201 tgatgaatca cttcgtgccg acctgttgtc aataaacttt tgggcctcat CD 251 atgagaatgg aaaactggag cattttctgc atcggtggat gaagaatcgc CD 301 gaacatccaa atttctggtt aagcatgttc ccagaaaaaa gatactttcg CD 351 agaaacaacg agcacgactg aagtggctat ccatacaaat cTatttacgg CD 401 atctatatgc ttTgattgga actggaagtt caagaacagg cggctggtat CD 451 actaccataa tgaaactgcc ttttcttttt tttattTgga taggatttct CD 501 gttggcttcg ctgggaggct cgcgtagttt gttacgtcaa ctccaaaagg CD 551 agaaattgcg ttggaattga SQ SEQUENCE 190 AA; MVRLRSTNTK KIQFTQRLPL GSELHMGKER CCLRGLDHLH GPTFHSICGN LMIYKPSLTN DRLIFEHDES LRADLLSINF WASYENGKLE HFLHRWMKNR EHPNFWLSMF PEKRYFRETT STTEVAIHTN LFTDLYALIG TGSSRTGGWY TTIMKLPFLF FIWIGFLLAS LGGSRSLLRQ LQKEKLRWN* // ID BA000009_20 STANDARD; PRT; 519 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : orf518 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC75957.2 FT PROTEIN_NAME : cytochrome c biogenesis protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 49343 - 50899 FT DIRECTIONS : negative FT EDITING : 12 S(tCa) -> L(tTa) FT EDITING : 22 Y(taC) -> Y(taT) FT EDITING : 44 Y(taC) -> Y(taT) FT EDITING : 66 Y(taC) -> Y(taT) FT EDITING : 102 S(tCt) -> F(tTt) FT EDITING : 307 F(ttC) -> F(ttT) FT EDITING : 314 H(Cat) -> Y(Tat) FT EDITING : 341 R(Cgg) -> W(Tgg) FT EDITING : 353 N(aaC) -> N(aaT) FT EDITING : 373 T(aCa) -> I(aTa) FT EDITING : 379 S(tCt) -> F(tTt) FT EDITING : 390 R(Cgg) -> W(Tgg) FT EDITING : 412 L(ctC) -> L(ctT) FT EDITING : 413 L(Ctt) -> F(Ttt) FT EDITING : 419 L(Ctg) -> L(Ttg) FT EDITING : 425 P(Cct) -> S(Tct) FT EDITING : 428 P(cCg) -> L(cTg) FT EDITING : 430 P(Cct) -> S(Tct) FT EDITING : 432 S(tCa) -> L(tTa) FT EDITING : 434 R(Cgt) -> C(Tgt) FT EDITING : 435 A(gCt) -> V(gTt) FT EDITING : 437 P(cCg) -> L(cTg) FT EDITING : 438 I(atC) -> I(atT) FT EDITING : 446 P(Cca) -> S(Tca) FT EDITING : 453 S(tCg) -> L(tTg) FT EDITING : 462 S(tCt) -> F(tTt) FT EDITING : 469 P(Cct) -> S(Tct) FT EDITING : 484 S(tCa) -> L(tTa) FT EDITING : 485 T(acC) -> T(acT) FT EDITING : 486 R(Cgt) -> C(Tgt) FT EDITING : 496 P(cCt) -> L(cTt) FT EDITING : 498 P(cCa) -> L(cTa) FT EDITING : 504 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 1557 NT; CD 1 atgatctact ctgttatgtt agaaggcgca aaatCaatag gtgccggagc CD 51 tgctttcaat acttaCcaag cgaatttgct agatgcatcc ggaccgtctg CD 101 cactaggtgc cggagctgct tccaatactt aCcaagcgaa tttgctagat CD 151 gcatccggac cgtctgcact aggtgccgga gctgcttcca atacttaCca CD 201 agcgaatttg ctagatgcat ccggagcgtc tggatcaggg atgcctgaag CD 251 ttattcttca gggaataccg gttcctccgg gtatcgatct agcctcgatc CD 301 tattCttcgc catttttctt cagtccctct gtttggatct ccggtgatat CD 351 tgaggatcct ttgattatct cgaagctcag taatttcaat aaatttttat CD 401 tagttctaca gaaggatttt tttcaaggga ccatacaagg cccctatatc CD 451 aaagctctcc aaggggtatt ggaccaaact tcacccgctt tactagcggg CD 501 aaaactggac ttcctactca ttagagagta caactcttgg tataacgttt CD 551 atgctaagaa tatgggtctc ggtgtgcccg tacatgattg gtatgtgaag CD 601 aactttggta aatttgtccc ttcccccctg gagcccctct tgactgacaa CD 651 ttttggtttc ttttttattg gcatccttct catagttgtg ttttctatct CD 701 ctctattatt atggcgcaga aagagaaaga atttcaagtg tgaggagagc CD 751 aagccttcat gtacgggcgt tccccgacag gggcctgcca gctcaggaag CD 801 ccaaacgccc gataccggta gaagggtccc tagccccctt tctctttctt CD 851 tattacaacc ttcttttttg atgtcaaaga ccaggaacta cgcgcaaatt CD 901 ctcattggat cttggttgtt Cttaacagcg atggctattC atttaagtct CD 951 ttgggtagca ccactagatt ttcaacaagg tggaaattct cgtattctct CD 1001 atgtacatgt tcctgtggct Cggatgagta ttcttgttta tatcgttacg CD 1051 gctataaaCa ctttcttgtt cctattaaca aaacatcctc tttttcttcg CD 1101 ctcttccgga accggtaCag aaatgggtgc tttttCtacg ttgtttacct CD 1151 tagttactgg ggggtttCgg ggaagaccca tgtgggggac cttttgggtg CD 1201 tgggatgctc gtttaacttc tgtattcatc ttgctCCtta tttacttggg CD 1251 tgcgCtgtgt tttcaaaagc ttCctgtaga acCggctCct atttCaatcC CD 1301 gtgCtggacC gatCgatata ccaataatca agtttCcagt caactggtgg CD 1351 aatacatCgc atcaacctgg gagcattagc cgatCtggta catcaataca CD 1401 tgttCctatg ctcattccaa tcttgtctaa ctttgctaac ttcctcttct CD 1451 CaacCCgtct attatttgtt attgaaatac gtcttcCtat tcCatctttt CD 1501 ctcgaatctC ctttaacgga agaaattgaa gctcgagaag gtagtttacg CD 1551 tgcttag FT EDITED CDNA CD 1 atgatctact ctgttatgtt agaaggcgca aaatTaatag gtgccggagc CD 51 tgctttcaat acttaTcaag cgaatttgct agatgcatcc ggaccgtctg CD 101 cactaggtgc cggagctgct tccaatactt aTcaagcgaa tttgctagat CD 151 gcatccggac cgtctgcact aggtgccgga gctgcttcca atacttaTca CD 201 agcgaatttg ctagatgcat ccggagcgtc tggatcaggg atgcctgaag CD 251 ttattcttca gggaataccg gttcctccgg gtatcgatct agcctcgatc CD 301 tattTttcgc catttttctt cagtccctct gtttggatct ccggtgatat CD 351 tgaggatcct ttgattatct cgaagctcag taatttcaat aaatttttat CD 401 tagttctaca gaaggatttt tttcaaggga ccatacaagg cccctatatc CD 451 aaagctctcc aaggggtatt ggaccaaact tcacccgctt tactagcggg CD 501 aaaactggac ttcctactca ttagagagta caactcttgg tataacgttt CD 551 atgctaagaa tatgggtctc ggtgtgcccg tacatgattg gtatgtgaag CD 601 aactttggta aatttgtccc ttcccccctg gagcccctct tgactgacaa CD 651 ttttggtttc ttttttattg gcatccttct catagttgtg ttttctatct CD 701 ctctattatt atggcgcaga aagagaaaga atttcaagtg tgaggagagc CD 751 aagccttcat gtacgggcgt tccccgacag gggcctgcca gctcaggaag CD 801 ccaaacgccc gataccggta gaagggtccc tagccccctt tctctttctt CD 851 tattacaacc ttcttttttg atgtcaaaga ccaggaacta cgcgcaaatt CD 901 ctcattggat cttggttgtt Tttaacagcg atggctattT atttaagtct CD 951 ttgggtagca ccactagatt ttcaacaagg tggaaattct cgtattctct CD 1001 atgtacatgt tcctgtggct Tggatgagta ttcttgttta tatcgttacg CD 1051 gctataaaTa ctttcttgtt cctattaaca aaacatcctc tttttcttcg CD 1101 ctcttccgga accggtaTag aaatgggtgc tttttTtacg ttgtttacct CD 1151 tagttactgg ggggtttTgg ggaagaccca tgtgggggac cttttgggtg CD 1201 tgggatgctc gtttaacttc tgtattcatc ttgctTTtta tttacttggg CD 1251 tgcgTtgtgt tttcaaaagc ttTctgtaga acTggctTct atttTaatcT CD 1301 gtgTtggacT gatTgatata ccaataatca agtttTcagt caactggtgg CD 1351 aatacatTgc atcaacctgg gagcattagc cgatTtggta catcaataca CD 1401 tgttTctatg ctcattccaa tcttgtctaa ctttgctaac ttcctcttct CD 1451 TaacTTgtct attatttgtt attgaaatac gtcttcTtat tcTatctttt CD 1501 ctcgaatctT ctttaacgga agaaattgaa gctcgagaag gtagtttacg CD 1551 tgcttag SQ SEQUENCE 519 AA; MIYSVMLEGA KLIGAGAAFN TYQANLLDAS GPSALGAGAA SNTYQANLLD ASGPSALGAG AASNTYQANL LDASGASGSG MPEVILQGIP VPPGIDLASI YFSPFFFSPS VWISGDIEDP LIISKLSNFN KFLLVLQKDF FQGTIQGPYI KALQGVLDQT SPALLAGKLD FLLIREYNSW YNVYAKNMGL GVPVHDWYVK NFGKFVPSPL EPLLTDNFGF FFIGILLIVV FSISLLLWRR KRKNFKCEES KPSCTGVPRQ GPASSGSQTP DTGRRVPSPL SLSLLQPSFL MSKTRNYAQI LIGSWLFLTA MAIYLSLWVA PLDFQQGGNS RILYVHVPVA WMSILVYIVT AINTFLFLLT KHPLFLRSSG TGIEMGAFFT LFTLVTGGFW GRPMWGTFWV WDARLTSVFI LLFIYLGALC FQKLSVELAS ILICVGLIDI PIIKFSVNWW NTLHQPGSIS RFGTSIHVSM LIPILSNFAN FLFLTCLLFV IEIRLLILSF LESSLTEEIE AREGSLRA* // ID BA000009_21 STANDARD; PRT; 199 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : orf25 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99306.2 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 54540 - 55136 FT DIRECTIONS : negative FT EDITING : 5 S(tCc) -> F(tTc) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 40 R(Cgt) -> C(Tgt) FT EDITING : 72 S(tCg) -> L(tTg) FT EDITING : 76 P(cCc) -> L(cTc) FT EDITING : 83 P(cCt) -> L(cTt) FT EDITING : 84 P(CCg) -> L(TTg) FT EDITING : 128 L(Cta) -> L(Tta) FT EDITING : 132 S(tCa) -> L(tTa) FT EDITING : 136 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 597 NT; CD 1 atgagaaaga gttCcacgaa gatgcaggct agaaagatgc tatttgctgc CD 51 tattctatct atttgtgcat Caagttcgaa gaagatctCa atctataatg CD 101 aagaaatgat agtagctCgt tgttttatag gctttatcat attcagtcgg CD 151 aagagtttag gtaatacttt caaagtgact ctcgacgaga gaatccaggc CD 201 tattcaggaa gaatCgcagc aattccCcaa tcctaacgaa gtagttcCtC CD 251 Cggaatccaa tgaacaacaa cgattactta gggtcagctt gcgaatttgt CD 301 ggaaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaaaacagtg caagctttgt tatgtcgaaa cCtaaatgtt aagtCagcaa CD 401 cacttcCaaa tgccacttct tcccgtcgca cccgtcttca ggatgatcta CD 451 gtcacaggtt ttcacttctc agtgagtgaa agatttgtcc ccgggtctac CD 501 gttgaaagct tctatagtag aactcattcg agaaggcttg gcggtcttaa CD 551 gaatggttcg ggtaggaggt tctcttaaga ataaagaaga caaatag FT EDITED CDNA CD 1 atgagaaaga gttTcacgaa gatgcaggct agaaagatgc tatttgctgc CD 51 tattctatct atttgtgcat Taagttcgaa gaagatctTa atctataatg CD 101 aagaaatgat agtagctTgt tgttttatag gctttatcat attcagtcgg CD 151 aagagtttag gtaatacttt caaagtgact ctcgacgaga gaatccaggc CD 201 tattcaggaa gaatTgcagc aattccTcaa tcctaacgaa gtagttcTtT CD 251 Tggaatccaa tgaacaacaa cgattactta gggtcagctt gcgaatttgt CD 301 ggaaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaaaacagtg caagctttgt tatgtcgaaa cTtaaatgtt aagtTagcaa CD 401 cacttcTaaa tgccacttct tcccgtcgca cccgtcttca ggatgatcta CD 451 gtcacaggtt ttcacttctc agtgagtgaa agatttgtcc ccgggtctac CD 501 gttgaaagct tctatagtag aactcattcg agaaggcttg gcggtcttaa CD 551 gaatggttcg ggtaggaggt tctcttaaga ataaagaaga caaatag SQ SEQUENCE 199 AA; MRKSFTKMQA RKMLFAAILS ICALSSKKIL IYNEEMIVAC CFIGFIIFSR KSLGNTFKVT LDERIQAIQE ELQQFLNPNE VVLLESNEQQ RLLRVSLRIC GTVVESLPMA RCAPKCEKTV QALLCRNLNV KLATLLNATS SRRTRLQDDL VTGFHFSVSE RFVPGSTLKA SIVELIREGL AVLRMVRVGG SLKNKEDK* // ID BA000009_22 STANDARD; PRT; 101 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : nad4L FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99307.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 55303 - 55605 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 16 S(tCa) -> L(tTa) FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 32 S(tCa) -> L(tTa) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 44 S(tCg) -> L(tTg) FT EDITING : 53 S(tCg) -> L(tTg) FT EDITING : 60 S(tCa) -> L(tTa) FT EDITING : 66 P(cCa) -> L(cTa) FT EDITING : 94 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggattcta tcaaatattt tacattttct atgatcatct ttatttCagg CD 51 tattCggggt attctcctta atagacgaaa tattcttatt atgtCaatgt CD 101 caattgaatC aatgttatta gctgtgaatt Cgaacttttt ggtattttct CD 151 gtttcttCgg atgatatgat gggtcaatCa tttgctttat tggttcCaac CD 201 ggtggcagct gcggaatctg ctattgggtt agccattttc gttattactt CD 251 tccgagtccg gggtactatt gctgtagaat Ctattaatag cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggattcta tcaaatattt tacattttct atgatcatct ttatttTagg CD 51 tattTggggt attctcctta atagacgaaa tattcttatt atgtTaatgt CD 101 caattgaatT aatgttatta gctgtgaatt Tgaacttttt ggtattttct CD 151 gtttcttTgg atgatatgat gggtcaatTa tttgctttat tggttcTaac CD 201 ggtggcagct gcggaatctg ctattgggtt agccattttc gttattactt CD 251 tccgagtccg gggtactatt gctgtagaat Ttattaatag cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDSIKYFTFS MIIFILGIWG ILLNRRNILI MLMSIELMLL AVNLNFLVFS VSLDDMMGQL FALLVLTVAA AESAIGLAIF VITFRVRGTI AVEFINSIQG * // ID BA000009_28 STANDARD; PRT; 75 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : atp9 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99313.2 FT PROTEIN_NAME : ATPase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 72367 - 72591 FT DIRECTIONS : negative FT EDITING : 7 S(tCa) -> L(tTa) FT EDITING : 17 S(tCa) -> L(tTa) FT EDITING : 32 I(atC) -> I(atT) FT EDITING : 71 S(tCa) -> L(tTa) FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gcgcaaaatC aataggtgcc ggagccgcta caattgcttC CD 51 agcgggagct gctatcggta ttggaaacgt ttttagttcc ttgatCcatt CD 101 ccgtggcgcg aaatccgtca ttggcgaaac aattatttgg ttatgctatt CD 151 ttgggctttg ctctaaccga agctatcgca ttgtttgccc taatgatggc CD 201 ctttttgatt tCattcgtat tcCga FT EDITED CDNA CD 1 atgttagaag gcgcaaaatT aataggtgcc ggagccgcta caattgcttT CD 51 agcgggagct gctatcggta ttggaaacgt ttttagttcc ttgatTcatt CD 101 ccgtggcgcg aaatccgtca ttggcgaaac aattatttgg ttatgctatt CD 151 ttgggctttg ctctaaccga agctatcgca ttgtttgccc taatgatggc CD 201 ctttttgatt tTattcgtat tcTga SQ SEQUENCE 75 AA; MLEGAKLIGA GAATIALAGA AIGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI LFVF* // ID BA000009_30 STANDARD; PRT; 301 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : orf300 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA99315.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 76447 - 77349 FT DIRECTIONS : negative FT EDITING : 4 P(ccC) -> P(ccT) FT EDITING : 27 S(tCt) -> F(tTt) FT EDITING : 74 H(Cat) -> Y(Tat) FT EDITING : 84 R(Cgt) -> C(Tgt) FT EDITING : 85 T(aCt) -> I(aTt) FT EDITING : 107 S(tCa) -> L(tTa) FT EDITING : 117 S(tCa) -> L(tTa) FT EDITING : 124 V(gtC) -> V(gtT) FT EDITING : 140 S(tCg) -> L(tTg) FT EDITING : 168 F(ttC) -> F(ttT) FT EDITING : 180 P(Cca) -> S(Tca) FT CODON_START : 1 CL CDNALEN 903 NT; CD 1 atgtgggcac cCgatatcta tgagggttca cccaccccgg ttacagcatt CD 51 cttttctatt gcgcctaaaa tatctatttC tgctaatatt ttacgtgttt CD 101 ttatttatgg ttcctatgga gctacattgc aacaaatctt ctttttctgc CD 151 agcattgctt ctatgatctt aggagcactg gccgccatgg cccaaacgaa CD 201 agtaaaaaga cttctagctC atagttcaat tggacatgta ggttatattC CD 251 gtaCtggttt ctcatgtgga accatagaag gaattcaatc actactaatt CD 301 ggtctcttta tttatgcatC aatgacgata gatgcattcg ctatagtttC CD 351 agcattacgg caaacacgtg tCaaatatat agcggatttg ggcgctctag CD 401 ccaaaacgaa tcctatttCg gctattacct tctctattac tatgttctca CD 451 tacgcaggaa tacccccgtt agccggcttt tgtagtaaat tctatttgtt CD 501 cttCgccgct ttgggttgtg gggcttactt cctagccCca gtgggagtag CD 551 tgactagcgt tataggttgt tgggcggccg gaaggttgcc acgagtaagt CD 601 cagtttgggg accgaaggca gttctccgtg caccggacac gtagcttacc CD 651 gaatcagttg cgacacggat gggaatgcat gctacgaaag atagggtcga CD 701 gtctgataca tcaaccgtct gtctactcaa tatccttgta cgagtccaca CD 751 atcactacac gagatgaacc ctggtttggt gaatttgagt tggccttagg CD 801 tgtaatagga ctcccagtta ctgcgcacga tcgtatactg aggtgctccc CD 851 cgccggttgt tggaacgacg cgagccgggc cgggcctcaa ttcagaaaga CD 901 taa FT EDITED CDNA CD 1 atgtgggcac cTgatatcta tgagggttca cccaccccgg ttacagcatt CD 51 cttttctatt gcgcctaaaa tatctatttT tgctaatatt ttacgtgttt CD 101 ttatttatgg ttcctatgga gctacattgc aacaaatctt ctttttctgc CD 151 agcattgctt ctatgatctt aggagcactg gccgccatgg cccaaacgaa CD 201 agtaaaaaga cttctagctT atagttcaat tggacatgta ggttatattT CD 251 gtaTtggttt ctcatgtgga accatagaag gaattcaatc actactaatt CD 301 ggtctcttta tttatgcatT aatgacgata gatgcattcg ctatagtttT CD 351 agcattacgg caaacacgtg tTaaatatat agcggatttg ggcgctctag CD 401 ccaaaacgaa tcctatttTg gctattacct tctctattac tatgttctca CD 451 tacgcaggaa tacccccgtt agccggcttt tgtagtaaat tctatttgtt CD 501 cttTgccgct ttgggttgtg gggcttactt cctagccTca gtgggagtag CD 551 tgactagcgt tataggttgt tgggcggccg gaaggttgcc acgagtaagt CD 601 cagtttgggg accgaaggca gttctccgtg caccggacac gtagcttacc CD 651 gaatcagttg cgacacggat gggaatgcat gctacgaaag atagggtcga CD 701 gtctgataca tcaaccgtct gtctactcaa tatccttgta cgagtccaca CD 751 atcactacac gagatgaacc ctggtttggt gaatttgagt tggccttagg CD 801 tgtaatagga ctcccagtta ctgcgcacga tcgtatactg aggtgctccc CD 851 cgccggttgt tggaacgacg cgagccgggc cgggcctcaa ttcagaaaga CD 901 taa SQ SEQUENCE 301 AA; MWAPDIYEGS PTPVTAFFSI APKISIFANI LRVFIYGSYG ATLQQIFFFC SIASMILGAL AAMAQTKVKR LLAYSSIGHV GYICIGFSCG TIEGIQSLLI GLFIYALMTI DAFAIVLALR QTRVKYIADL GALAKTNPIL AITFSITMFS YAGIPPLAGF CSKFYLFFAA LGCGAYFLAS VGVVTSVIGC WAAGRLPRVS QFGDRRQFSV HRTRSLPNQL RHGWECMLRK IGSSLIHQPS VYSISLYEST ITTRDEPWFG EFELALGVIG LPVTAHDRIL RCSPPVVGTT RAGPGLNSER * // ID BA000009_38 STANDARD; PRT; 326 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99457.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 129/2 FT INTRON 157/0 FT INTRON 221/0 FT INTRON 240/2 FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 56 S(tCg) -> L(tTg) FT EDITING : 72 S(tCc) -> F(tTc) FT EDITING : 89 R(Cgg) -> W(Tgg) FT EDITING : 103 P(CCg) -> L(TTg) FT CODON_START : 1 CL CDNALEN 978 NT; CD 1 aCgtacatag ctgttccagc tgaaatactt ggaataattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttCgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctCccttt ttagaatggc tccagtcact acatttatgc CD 251 taagtctggt tgctCgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatCCga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga attattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtccctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc ctcgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtccggt attcccttgt CD 551 tccctgtatt ggttatgttc tttatttctt gtttagcaga aactaatcga CD 601 gctccgtttg atctcccaga agcggaacgt gaattagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtctgctct ttttttttta ggagagtatg CD 701 ccaatatgat cttaatgagt ggtctatgca catcgctttc tccaggaggt CD 751 tggccgccta tcctagatct tcccatttcc aagaggatcc cgggctcgat CD 801 ctggtttagt atcaaggtga ttctctttct ctttctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtcgccg tttctggtgt CD 951 tttagtcacc tttcaatggc tcccttaa FT EDITED CDNA CD 1 aTgtacatag ctgttccagc tgaaatactt ggaataattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttTgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctTccttt ttagaatggc tccagtcact acatttatgc CD 251 taagtctggt tgctTgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatTTga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga attattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtccctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc ctcgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtccggt attcccttgt CD 551 tccctgtatt ggttatgttc tttatttctt gtttagcaga aactaatcga CD 601 gctccgtttg atctcccaga agcggaacgt gaattagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtctgctct ttttttttta ggagagtatg CD 701 ccaatatgat cttaatgagt ggtctatgca catcgctttc tccaggaggt CD 751 tggccgccta tcctagatct tcccatttcc aagaggatcc cgggctcgat CD 801 ctggtttagt atcaaggtga ttctctttct ctttctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtcgccg tttctggtgt CD 951 tttagtcacc tttcaatggc tcccttaa SQ SEQUENCE 326 AA; MYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGLKLIL KEPISPSSAN FFLFRMAPVT TFMLSLVAWA VVPFDYGMVL SDLNIGLLYL FAISSLGVYG IIIAGWSSNS KYAFLGALRS AAQMVPYEVS IGLILITVLI CVGPRNSSEI VMAQKQIWSG IPLFPVLVMF FISCLAETNR APFDLPEAER ELVAGYNVEY SSMGSALFFL GEYANMILMS GLCTSLSPGG WPPILDLPIS KRIPGSIWFS IKVILFLFLY IWVRAAFPRY RYDQLMGLGR KVFLPLSLAR VVAVSGVLVT FQWLP* // ID BA000009_40 STANDARD; PRT; 118 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : orf117 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA99324.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 104911 - 105264 FT DIRECTIONS : negative FT EDITING : 23 P(Cct) -> S(Tct) FT EDITING : 24 R(Cgt) -> C(Tgt) FT EDITING : 26 S(tCg) -> L(tTg) FT EDITING : 38 S(tCC) -> F(tTT) FT CODON_START : 1 CL CDNALEN 354 NT; CD 1 atgcagggaa acttgcacgt gtggttctgg ccggggcccc ggtatactgt CD 51 actaatatgt gtaggtCctC gtaattCgag tgagattgtc atggcgcaaa CD 101 agcagatatg gtCCggtatt cccttgttcc ctgtattggt tatgttcttt CD 151 atttcttgtt tagcagaaac taatcgagct ccgtttgatc tcccagaagc CD 201 ggaacgtgaa ttagttgcag gctataatgt agaatatgcg cgggatgcga CD 251 tccttaatag ttcactgttg gcggaagcca atcccggggt cccgggactc CD 301 attctgactg aaacaggggg tggtctttac caacttcaaa attctcgatt CD 351 ttag FT EDITED CDNA CD 1 atgcagggaa acttgcacgt gtggttctgg ccggggcccc ggtatactgt CD 51 actaatatgt gtaggtTctT gtaattTgag tgagattgtc atggcgcaaa CD 101 agcagatatg gtTTggtatt cccttgttcc ctgtattggt tatgttcttt CD 151 atttcttgtt tagcagaaac taatcgagct ccgtttgatc tcccagaagc CD 201 ggaacgtgaa ttagttgcag gctataatgt agaatatgcg cgggatgcga CD 251 tccttaatag ttcactgttg gcggaagcca atcccggggt cccgggactc CD 301 attctgactg aaacaggggg tggtctttac caacttcaaa attctcgatt CD 351 ttag SQ SEQUENCE 118 AA; MQGNLHVWFW PGPRYTVLIC VGSCNLSEIV MAQKQIWFGI PLFPVLVMFF ISCLAETNRA PFDLPEAERE LVAGYNVEYA RDAILNSSLL AEANPGVPGL ILTETGGGLY QLQNSRF* // ID BA000009_41 STANDARD; PRT; 117 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : rps13 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99325.2 FT PROTEIN_NAME : ribosomal protein S13 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 107038 - 107388 FT DIRECTIONS : negative FT EDITING : 19 S(tCa) -> L(tTa) FT EDITING : 78 I(atC) -> I(atT) FT CODON_START : 1 CL CDNALEN 351 NT; CD 1 atgtcatata tttcaggagc tagattagtt gacgataaac aagtaaaaat CD 51 tgcctCaaca aaaattgatg gaattggacc taaaaaagcc attcaggttt CD 101 gttatcgatt aggtatcagt gataacatta agataaaaga gttaactaaa CD 151 tatcagatcg accaaattga acaaatgata ggtcaagatc atgttgttca CD 201 ttgggaattg aagaggggag aacgagcaga catCgaacga ttaatttcta CD 251 tttcttgtta tcgtggaatt cgtcatcaag atggattgcc cttacgcggt CD 301 caacgaactc atactaatgc taggacttgt cgtaagaaaa ttcggaaatg CD 351 a FT EDITED CDNA CD 1 atgtcatata tttcaggagc tagattagtt gacgataaac aagtaaaaat CD 51 tgcctTaaca aaaattgatg gaattggacc taaaaaagcc attcaggttt CD 101 gttatcgatt aggtatcagt gataacatta agataaaaga gttaactaaa CD 151 tatcagatcg accaaattga acaaatgata ggtcaagatc atgttgttca CD 201 ttgggaattg aagaggggag aacgagcaga catTgaacga ttaatttcta CD 251 tttcttgtta tcgtggaatt cgtcatcaag atggattgcc cttacgcggt CD 301 caacgaactc atactaatgc taggacttgt cgtaagaaaa ttcggaaatg CD 351 a SQ SEQUENCE 117 AA; MSYISGARLV DDKQVKIALT KIDGIGPKKA IQVCYRLGIS DNIKIKELTK YQIDQIEQMI GQDHVVHWEL KRGERADIER LISISCYRGI RHQDGLPLRG QRTHTNARTC RKKIRK* // ID BA000009_58 STANDARD; PRT; 207 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : ccb206 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99342.2 FT PROTEIN_NAME : cytochrome c biogenesis protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 156020 - 156640 FT DIRECTIONS : negative FT EDITING : 10 H(Cat) -> Y(Tat) FT EDITING : 13 I(atC) -> I(atT) FT EDITING : 24 P(cCa) -> L(cTa) FT EDITING : 27 S(tCg) -> L(tTg) FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 50 P(CCg) -> L(TTg) FT EDITING : 52 R(Cgg) -> W(Tgg) FT EDITING : 54 P(Cct) -> S(Tct) FT EDITING : 58 P(Cct) -> S(Tct) FT EDITING : 60 P(cCC) -> L(cTT) FT EDITING : 61 P(CcC) -> S(TcT) FT EDITING : 96 R(Cgg) -> W(Tgg) FT EDITING : 102 R(Cgt) -> C(Tgt) FT EDITING : 136 L(Ctg) -> L(Ttg) FT EDITING : 142 R(Cgt) -> C(Tgt) FT EDITING : 156 S(tCg) -> L(tTg) FT EDITING : 162 S(tCa) -> L(tTa) FT EDITING : 165 S(tCa) -> L(tTa) FT EDITING : 168 S(tCa) -> L(tTa) FT EDITING : 169 T(acC) -> T(acT) FT EDITING : 171 S(tCt) -> F(tTt) FT EDITING : 172 R(Cgt) -> C(Tgt) FT EDITING : 184 S(tCa) -> L(tTa) FT EDITING : 185 S(tCg) -> L(tTg) FT EDITING : 190 S(tCt) -> F(tTt) FT EDITING : 191 S(tCg) -> L(tTg) FT EDITING : 199 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 621 NT; CD 1 atgagacgac tcttttttga actatatCat aaacagatCt tcttctccac CD 51 accaatcacg agtttttctc CattcctctC gtatattgtc gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttCat gtcatttcca tttaggtCCg CD 151 attCggatcC ctctgttgtt tCcttttcCC CcCgcacctt ttcttcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt gcttattgct CD 251 tgccaaagat cctacttcta caattggtag gtcacCgggt tattcaaata CD 301 agtCgtgttt tctgtagttt tcccatgtta caacttctgt accaattcgg CD 351 tcaatccgga atggatcggt taaacattct attagggagc ctggtcttga CD 401 ctcttCtgtg tggtattcat tctCgtttgg ctcttggaat cacatccagc CD 451 agtggttgga acagctCgca aaatttaacc acttCaccta cttCattgcc CD 501 ctCaacCgtt tCtCgtacct ctattgaaac agaatggttt catgttcttt CD 551 CatCgattgg ttatttttCt tCgttcgtct ctctttttcc aatttCggtc CD 601 tcgattagtt cacaagattg a FT EDITED CDNA CD 1 atgagacgac tcttttttga actatatTat aaacagatTt tcttctccac CD 51 accaatcacg agtttttctc TattcctctT gtatattgtc gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttTat gtcatttcca tttaggtTTg CD 151 attTggatcT ctctgttgtt tTcttttcTT TcTgcacctt ttcttcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt gcttattgct CD 251 tgccaaagat cctacttcta caattggtag gtcacTgggt tattcaaata CD 301 agtTgtgttt tctgtagttt tcccatgtta caacttctgt accaattcgg CD 351 tcaatccgga atggatcggt taaacattct attagggagc ctggtcttga CD 401 ctcttTtgtg tggtattcat tctTgtttgg ctcttggaat cacatccagc CD 451 agtggttgga acagctTgca aaatttaacc acttTaccta cttTattgcc CD 501 ctTaacTgtt tTtTgtacct ctattgaaac agaatggttt catgttcttt CD 551 TatTgattgg ttatttttTt tTgttcgtct ctctttttcc aatttTggtc CD 601 tcgattagtt cacaagattg a SQ SEQUENCE 207 AA; MRRLFFELYY KQIFFSTPIT SFSLFLLYIV VTPLMLGFEK DFLCHFHLGL IWISLLFSFL SAPFLRNEKE DGTLELYYLS AYCLPKILLL QLVGHWVIQI SCVFCSFPML QLLYQFGQSG MDRLNILLGS LVLTLLCGIH SCLALGITSS SGWNSLQNLT TLPTLLPLTV FCTSIETEWF HVLLLIGYFF LFVSLFPILV SISSQD* // ID BA000009_66 STANDARD; PRT; 671 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99490.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 5 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 77/2 FT INTRON 483/0 FT INTRON 490/1 FT INTRON 622/0 FT EDITING : 52 P(cCg) -> L(cTg) FT EDITING : 81 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 2013 NT; CD 1 atgtatttac ttatcgtctt tttgcccttg cttggtagtt ccgtagcagg CD 51 ttttttcgga cgttttctag gatcagaagg aactgctata gtgactacta CD 101 cgtgcgtttc attctcttcg atcttatctt tgattgcttt ttatgaagtc CD 151 gcacCgggag ctagtgcttg ctatctaaga attgctccat ggatttcatc CD 201 ggaaatgttt gatgcttctt ggggcttctt gttcgatagc cCgaccgtag CD 251 tgatgttaat tgtggttaca ttcataagta gcttggtcca tctttattct CD 301 atttcatata tgtctgagga tccgcatagc cctcgattta tgtgttattt CD 351 atccattctt acttttttta tgccaatgtt ggtgactgga gataactctc CD 401 ttcaattatt cttgggatgg gagggagtag gtcttgcttc atatttgtta CD 451 attcattttt ggtttacacg acttcaggca gataaagcag ctataaaagc CD 501 tatgcttgtc aatcgagtag gtgattttgg attagctctt gggatttcgg CD 551 gttgttttac tctctttcaa acagtagact tttctaccat ttttgcttgt CD 601 gctagtgccc ctagaaattc ttggattttt tgcaatatga gattgaatgc CD 651 cataactctt atttgtattt tactttttat tggtgctgtt ggaaaatctg CD 701 cacagatagg atcgcatact tggtcacccg atgctatgga gggtcccact CD 751 ccagtatccg ctttgattca tgcagctact atggtaacag ctggcgtttt CD 801 catgatagca aggtgttccc ctttatttga atacccacct acggctttaa CD 851 ttgttattac ttttgcagga gctatgacgt cattccttgc ggcaaccact CD 901 ggaatattac agaacgatct aaagagggtc atagcttatt caacttgcag CD 951 tcaattaggc tatatgatct ttgcttgcgg catttctaac tattcggtta CD 1001 gcgtctttca tttaatgaat cacgcctttt tcaaagcatt actattcctg CD 1051 agtgcaggtt cggtgattca tgccatgtcg gatgagcaag atatgcggaa CD 1101 gatggggggg ctcgcctcct cgttcccctt tacctatgcc atgatgctca CD 1151 tgggcagctt atctctaatt ggatttcctt ttctaactgg attttattcc CD 1201 aaagatgtga tcttagagct cgcttacact aagtatacca tcagtgggaa CD 1251 ctttgctttc tggttgggaa gtgtctctgt ccttttcact tcttattact CD 1301 cttttcgttt actttttcta acatttctag taccaactaa ttcattcggg CD 1351 cgagacatct tacgatgtca tgatgcgccc attcctatgg ccattccttt CD 1401 aatacttctg gctttcggga gtctctttgt aggatacttg gccaaagata CD 1451 tgatgattgg tttaggtacc aatttttggg ccaattccct cttcgtacta CD 1501 ccaaaaaatg agattcttgc cgaatccgag tttgctgctc caaccattac CD 1551 caaactaata cctattctgt ttagtacttc aggtgcttct gttgcgtata CD 1601 atgtaaatcc cgtagcggat caattccaac gagcctttca aactagtact CD 1651 ttttgtaatc gactctatag cttcttcaat aaacgctggt tcttcgatca CD 1701 agttttgaat gactttatag tcagatcgtt cttgcgtttc gggtatgaag CD 1751 tctcattcga agctttagac aaaggtgcta ttgagatatt gggcccctat CD 1801 ggtatctcgt acacattccg acgattggcc gagcgaataa gtcaacttca CD 1851 aagtggattt gtttatcatt atgcctttgc aatgttactt ggttcaactc CD 1901 tatttgtgac cttttctcgt atgtgggact ttctatcttc ttgggtagat CD 1951 aatcgatcgt ctttcatttg gatagtgagt agtttttata ataataagtc CD 2001 aagtcaagaa taa FT EDITED CDNA CD 1 atgtatttac ttatcgtctt tttgcccttg cttggtagtt ccgtagcagg CD 51 ttttttcgga cgttttctag gatcagaagg aactgctata gtgactacta CD 101 cgtgcgtttc attctcttcg atcttatctt tgattgcttt ttatgaagtc CD 151 gcacTgggag ctagtgcttg ctatctaaga attgctccat ggatttcatc CD 201 ggaaatgttt gatgcttctt ggggcttctt gttcgatagc cTgaccgtag CD 251 tgatgttaat tgtggttaca ttcataagta gcttggtcca tctttattct CD 301 atttcatata tgtctgagga tccgcatagc cctcgattta tgtgttattt CD 351 atccattctt acttttttta tgccaatgtt ggtgactgga gataactctc CD 401 ttcaattatt cttgggatgg gagggagtag gtcttgcttc atatttgtta CD 451 attcattttt ggtttacacg acttcaggca gataaagcag ctataaaagc CD 501 tatgcttgtc aatcgagtag gtgattttgg attagctctt gggatttcgg CD 551 gttgttttac tctctttcaa acagtagact tttctaccat ttttgcttgt CD 601 gctagtgccc ctagaaattc ttggattttt tgcaatatga gattgaatgc CD 651 cataactctt atttgtattt tactttttat tggtgctgtt ggaaaatctg CD 701 cacagatagg atcgcatact tggtcacccg atgctatgga gggtcccact CD 751 ccagtatccg ctttgattca tgcagctact atggtaacag ctggcgtttt CD 801 catgatagca aggtgttccc ctttatttga atacccacct acggctttaa CD 851 ttgttattac ttttgcagga gctatgacgt cattccttgc ggcaaccact CD 901 ggaatattac agaacgatct aaagagggtc atagcttatt caacttgcag CD 951 tcaattaggc tatatgatct ttgcttgcgg catttctaac tattcggtta CD 1001 gcgtctttca tttaatgaat cacgcctttt tcaaagcatt actattcctg CD 1051 agtgcaggtt cggtgattca tgccatgtcg gatgagcaag atatgcggaa CD 1101 gatggggggg ctcgcctcct cgttcccctt tacctatgcc atgatgctca CD 1151 tgggcagctt atctctaatt ggatttcctt ttctaactgg attttattcc CD 1201 aaagatgtga tcttagagct cgcttacact aagtatacca tcagtgggaa CD 1251 ctttgctttc tggttgggaa gtgtctctgt ccttttcact tcttattact CD 1301 cttttcgttt actttttcta acatttctag taccaactaa ttcattcggg CD 1351 cgagacatct tacgatgtca tgatgcgccc attcctatgg ccattccttt CD 1401 aatacttctg gctttcggga gtctctttgt aggatacttg gccaaagata CD 1451 tgatgattgg tttaggtacc aatttttggg ccaattccct cttcgtacta CD 1501 ccaaaaaatg agattcttgc cgaatccgag tttgctgctc caaccattac CD 1551 caaactaata cctattctgt ttagtacttc aggtgcttct gttgcgtata CD 1601 atgtaaatcc cgtagcggat caattccaac gagcctttca aactagtact CD 1651 ttttgtaatc gactctatag cttcttcaat aaacgctggt tcttcgatca CD 1701 agttttgaat gactttatag tcagatcgtt cttgcgtttc gggtatgaag CD 1751 tctcattcga agctttagac aaaggtgcta ttgagatatt gggcccctat CD 1801 ggtatctcgt acacattccg acgattggcc gagcgaataa gtcaacttca CD 1851 aagtggattt gtttatcatt atgcctttgc aatgttactt ggttcaactc CD 1901 tatttgtgac cttttctcgt atgtgggact ttctatcttc ttgggtagat CD 1951 aatcgatcgt ctttcatttg gatagtgagt agtttttata ataataagtc CD 2001 aagtcaagaa taa SQ SEQUENCE 671 AA; MYLLIVFLPL LGSSVAGFFG RFLGSEGTAI VTTTCVSFSS ILSLIAFYEV ALGASACYLR IAPWISSEMF DASWGFLFDS LTVVMLIVVT FISSLVHLYS ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL IHFWFTRLQA DKAAIKAMLV NRVGDFGLAL GISGCFTLFQ TVDFSTIFAC ASAPRNSWIF CNMRLNAITL ICILLFIGAV GKSAQIGSHT WSPDAMEGPT PVSALIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITFAG AMTSFLAATT GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPFTYA MMLMGSLSLI GFPFLTGFYS KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDILRCHDAP IPMAIPLILL AFGSLFVGYL AKDMMIGLGT NFWANSLFVL PKNEILAESE FAAPTITKLI PILFSTSGAS VAYNVNPVAD QFQRAFQTST FCNRLYSFFN KRWFFDQVLN DFIVRSFLRF GYEVSFEALD KGAIEILGPY GISYTFRRLA ERISQLQSGF VYHYAFAMLL GSTLFVTFSR MWDFLSSWVD NRSSFIWIVS SFYNNKSSQE * // ID BA000009_67 STANDARD; PRT; 400 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : orf399 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA99350.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 172973 - 174172 FT DIRECTIONS : positive FT EDITING : 36 L(Ctt) -> F(Ttt) FT EDITING : 41 P(cCa) -> L(cTa) FT EDITING : 49 S(tCt) -> F(tTt) FT EDITING : 99 S(tCg) -> L(tTg) FT EDITING : 119 A(gCc) -> V(gTc) FT EDITING : 154 S(tCg) -> L(tTg) FT EDITING : 158 S(tCa) -> L(tTa) FT EDITING : 195 P(Cca) -> S(Tca) FT CODON_START : 1 CL CDNALEN 1200 NT; CD 1 atgttaattg tggttacatt cataagtagc ttggtccatc tttattctat CD 51 ttcatatatg tctgaggatc cgcatagccc tcgatttatg tgttatttat CD 101 ccattCttac tttttttatg cCaatgttgg tgactggaga taactCtctt CD 151 caattattct tgggatggga gggagtaggt cttgcttcat atttgttaat CD 201 tcatttttgg tttacacgac ttcaggcaga taaagcagct ataaaagcta CD 251 tgcttgtcaa tcgagtaggt gattttggat tagctcttgg gatttCgggt CD 301 tgttttactc tctttcaaac agtagacttt tctaccattt ttgcttgtgc CD 351 tagtgCccct agaaattctt ggattttttg caatatgaga ttgaatgcca CD 401 taactcttat ttgtatttta ctttttattg gtgctgttgg aaaatctgca CD 451 cagataggat Cgcatacttg gtCacccgat gctatggagg gtcccactcc CD 501 agtatccgct ttgattcatg cagctactat ggtaacagct ggcgttttca CD 551 tgatagcaag gtgttcccct ttatttgaat acCcacctac ggctttaatt CD 601 gttattactt ttgcaggagc tatgacgtca ttccttgcgg caaccactgg CD 651 aatattacag aacgatctaa agagggtcat agcttattca acttgcagtc CD 701 aattaggcta tatgatcttt gcttgcggca tttctaacta ttcggttagc CD 751 gtctttcatt taatgaatca cgcctttttc aaagcattac tattcctgag CD 801 tgcaggttcg gtgattcatg ccatgtcgga tgagcaagat atgcggaaga CD 851 tgggggggct cgcctcctcg ttccccttta cctatgccat gatgctcatg CD 901 ggcagcttat ctctaattgg atttcctttt ctaactggat tttattccaa CD 951 agatgtgatc ttagagctcg cttacactaa gtataccatc agtgggaact CD 1001 ttgctttctg gttgggaagt gtctctgtcc ttttcacttc ttattactct CD 1051 tttcgtttac tttttctaac atttctagta ccaactaatt cattcgggcg CD 1101 agacatctta cgatgtcatg atgcgcccat tcctatggcc attcctttaa CD 1151 tacttctggc tttcgggagt ctctttgtag gatacttggc caaagtgtga FT EDITED CDNA CD 1 atgttaattg tggttacatt cataagtagc ttggtccatc tttattctat CD 51 ttcatatatg tctgaggatc cgcatagccc tcgatttatg tgttatttat CD 101 ccattTttac tttttttatg cTaatgttgg tgactggaga taactTtctt CD 151 caattattct tgggatggga gggagtaggt cttgcttcat atttgttaat CD 201 tcatttttgg tttacacgac ttcaggcaga taaagcagct ataaaagcta CD 251 tgcttgtcaa tcgagtaggt gattttggat tagctcttgg gatttTgggt CD 301 tgttttactc tctttcaaac agtagacttt tctaccattt ttgcttgtgc CD 351 tagtgTccct agaaattctt ggattttttg caatatgaga ttgaatgcca CD 401 taactcttat ttgtatttta ctttttattg gtgctgttgg aaaatctgca CD 451 cagataggat Tgcatacttg gtTacccgat gctatggagg gtcccactcc CD 501 agtatccgct ttgattcatg cagctactat ggtaacagct ggcgttttca CD 551 tgatagcaag gtgttcccct ttatttgaat acTcacctac ggctttaatt CD 601 gttattactt ttgcaggagc tatgacgtca ttccttgcgg caaccactgg CD 651 aatattacag aacgatctaa agagggtcat agcttattca acttgcagtc CD 701 aattaggcta tatgatcttt gcttgcggca tttctaacta ttcggttagc CD 751 gtctttcatt taatgaatca cgcctttttc aaagcattac tattcctgag CD 801 tgcaggttcg gtgattcatg ccatgtcgga tgagcaagat atgcggaaga CD 851 tgggggggct cgcctcctcg ttccccttta cctatgccat gatgctcatg CD 901 ggcagcttat ctctaattgg atttcctttt ctaactggat tttattccaa CD 951 agatgtgatc ttagagctcg cttacactaa gtataccatc agtgggaact CD 1001 ttgctttctg gttgggaagt gtctctgtcc ttttcacttc ttattactct CD 1051 tttcgtttac tttttctaac atttctagta ccaactaatt cattcgggcg CD 1101 agacatctta cgatgtcatg atgcgcccat tcctatggcc attcctttaa CD 1151 tacttctggc tttcgggagt ctctttgtag gatacttggc caaagtgtga SQ SEQUENCE 400 AA; MLIVVTFISS LVHLYSISYM SEDPHSPRFM CYLSIFTFFM LMLVTGDNFL QLFLGWEGVG LASYLLIHFW FTRLQADKAA IKAMLVNRVG DFGLALGILG CFTLFQTVDF STIFACASVP RNSWIFCNMR LNAITLICIL LFIGAVGKSA QIGLHTWLPD AMEGPTPVSA LIHAATMVTA GVFMIARCSP LFEYSPTALI VITFAGAMTS FLAATTGILQ NDLKRVIAYS TCSQLGYMIF ACGISNYSVS VFHLMNHAFF KALLFLSAGS VIHAMSDEQD MRKMGGLASS FPFTYAMMLM GSLSLIGFPF LTGFYSKDVI LELAYTKYTI SGNFAFWLGS VSVLFTSYYS FRLLFLTFLV PTNSFGRDIL RCHDAPIPMA IPLILLAFGS LFVGYLAKV* // ID BA000009_69 STANDARD; PRT; 394 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : cob FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99352.2 FT PROTEIN_NAME : apocytochrome B FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 179096 - 180277 FT DIRECTIONS : negative FT EDITING : 14 P(ccC) -> P(ccT) FT EDITING : 96 L(Ctc) -> F(Ttc) FT EDITING : 100 H(Cac) -> Y(Tac) FT EDITING : 109 H(Cat) -> Y(Tat) FT EDITING : 120 R(Cgg) -> W(Tgg) FT EDITING : 138 Y(taC) -> Y(taT) FT EDITING : 190 H(Cat) -> Y(Tat) FT EDITING : 227 L(Ctt) -> F(Ttt) FT EDITING : 270 P(Ccc) -> S(Tcc) FT EDITING : 303 P(cCc) -> L(cTc) FT EDITING : 308 L(ctC) -> L(ctT) FT EDITING : 361 P(Cct) -> S(Tct) FT EDITING : 387 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1182 NT; CD 1 atgagtctaa gaaaccaacg attctctgtt cttaaacaac cCatattttc CD 51 cacacttaat cagcatttga tagattatcc aaccccgagc aatattagtt CD 101 attggtgggg attcggttcg ttagctggga tttgtttagt cattcagata CD 151 gtgactggcg tttttttagc tatgcattat acacctcatg tggatctagc CD 201 tttcaacagc gtagaacaca ttatgagaga tgttgaaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttCtcat tgtggttCac CD 301 cttcatattt ttcgtggtct atatCatgcg agttatagca gccctaggga CD 351 atttgttCgg tgtctcggag ttgtaatctt cttattaatg attgtgacag CD 401 cttttatagg ataCgtacta ccttggggtc agatgagctt ttggggagct CD 451 acagtaatta caagcttagc tagcgctata cctgtagtag gagatagcat CD 501 agtgacttgg ctttggggcg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tcttcatCat ttactccctt ttattttagt aggcgccagt CD 601 cttcttcatc tggccgcatt gcatcaatat ggatcaaata atccattagg CD 651 tgtacattca gagatggata aaattgccCt ttacccttat ttttatgtaa CD 701 aggatctagt aggttgggta gcttttgcta tctttttttc cttttggatt CD 751 ttttatgctc ctaatgtttt ggggcatccc gacaattata tacctgctaa CD 801 tccgatgCcc accccgcctc atattgtgcc ggaatggtat ttcttaccca CD 851 tctatgccat tcttcgtagt atacctgaca aatcgggagg tgtagccgca CD 901 atagcacCcg tttttatatg tctCttggct ttaccttttt ttaaaagtat CD 951 gtatgtacgt agttcaagtt ttcgcccgat ttaccaagga ctcttttggt CD 1001 tgcttttggc ggattgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaagcaccct ttgttactat tggacaaatt Ccttcttttc ttttcttctt CD 1101 gttctttgcc ataacgccca ttctgggacg agttggaaga agaattccta CD 1151 attcttacaC ggatgagact gagaacacct ga FT EDITED CDNA CD 1 atgagtctaa gaaaccaacg attctctgtt cttaaacaac cTatattttc CD 51 cacacttaat cagcatttga tagattatcc aaccccgagc aatattagtt CD 101 attggtgggg attcggttcg ttagctggga tttgtttagt cattcagata CD 151 gtgactggcg tttttttagc tatgcattat acacctcatg tggatctagc CD 201 tttcaacagc gtagaacaca ttatgagaga tgttgaaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttTtcat tgtggttTac CD 301 cttcatattt ttcgtggtct atatTatgcg agttatagca gccctaggga CD 351 atttgttTgg tgtctcggag ttgtaatctt cttattaatg attgtgacag CD 401 cttttatagg ataTgtacta ccttggggtc agatgagctt ttggggagct CD 451 acagtaatta caagcttagc tagcgctata cctgtagtag gagatagcat CD 501 agtgacttgg ctttggggcg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tcttcatTat ttactccctt ttattttagt aggcgccagt CD 601 cttcttcatc tggccgcatt gcatcaatat ggatcaaata atccattagg CD 651 tgtacattca gagatggata aaattgccTt ttacccttat ttttatgtaa CD 701 aggatctagt aggttgggta gcttttgcta tctttttttc cttttggatt CD 751 ttttatgctc ctaatgtttt ggggcatccc gacaattata tacctgctaa CD 801 tccgatgTcc accccgcctc atattgtgcc ggaatggtat ttcttaccca CD 851 tctatgccat tcttcgtagt atacctgaca aatcgggagg tgtagccgca CD 901 atagcacTcg tttttatatg tctTttggct ttaccttttt ttaaaagtat CD 951 gtatgtacgt agttcaagtt ttcgcccgat ttaccaagga ctcttttggt CD 1001 tgcttttggc ggattgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaagcaccct ttgttactat tggacaaatt Tcttcttttc ttttcttctt CD 1101 gttctttgcc ataacgccca ttctgggacg agttggaaga agaattccta CD 1151 attcttacaT ggatgagact gagaacacct ga SQ SEQUENCE 394 AA; MSLRNQRFSV LKQPIFSTLN QHLIDYPTPS NISYWWGFGS LAGICLVIQI VTGVFLAMHY TPHVDLAFNS VEHIMRDVEG GWLLRYMHAN GASMFFIVVY LHIFRGLYYA SYSSPREFVW CLGVVIFLLM IVTAFIGYVL PWGQMSFWGA TVITSLASAI PVVGDSIVTW LWGGFSVDNA TLNRFFSLHY LLPFILVGAS LLHLAALHQY GSNNPLGVHS EMDKIAFYPY FYVKDLVGWV AFAIFFSFWI FYAPNVLGHP DNYIPANPMS TPPHIVPEWY FLPIYAILRS IPDKSGGVAA IALVFICLLA LPFFKSMYVR SSSFRPIYQG LFWLLLADCL LLGWIGCQPV EAPFVTIGQI SSFLFFLFFA ITPILGRVGR RIPNSYMDET ENT* // ID BA000009_71 STANDARD; PRT; 187 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : rpl5 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99354.2 FT PROTEIN_NAME : ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 181752 - 182312 FT DIRECTIONS : negative FT EDITING : 16 P(cCg) -> L(cTg) FT EDITING : 20 P(cCg) -> L(cTg) FT EDITING : 22 H(Cac) -> Y(Tac) FT EDITING : 57 P(Ccg) -> S(Tcg) FT EDITING : 173 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 561 NT; CD 1 atgtttcccc tccattttca ttacgaagat gtttcacgtc aagatcCgtt CD 51 gctcaaacCg aatCacgcca acgttatgga cgttcctgga ttgtgtgaaa CD 101 taagagtagt accaaaggca gcaccttctg atttcataat ccaaaatgga CD 151 aaattggcta tggagattCc gtgcggtcag aaatttatac ggacacgcag CD 201 gggttcgata ggaaagtcgt ttcaatccaa tccattcttg gggtcaaata CD 251 aagacaaagg atatgtcaat gacctagcac gacaaagcac tctccgaggg CD 301 catggaatgt ttcatttttt ggtcagaatc tcgacagtaa tgtctctctt CD 351 agattctctg gtggaaatac gggaaaactc cattcaattc tcgatggaaa CD 401 cggagttttg cgaattctcc ccggaactag aagatcattt tgagatcttc CD 451 gaacatattc gagggttcaa tgtaactatt gtcacttcag ccaacacaca CD 501 agatgagact ttactacCgt ggagcggctt tttgcaaaaa gatgagggag CD 551 aaactcagta a FT EDITED CDNA CD 1 atgtttcccc tccattttca ttacgaagat gtttcacgtc aagatcTgtt CD 51 gctcaaacTg aatTacgcca acgttatgga cgttcctgga ttgtgtgaaa CD 101 taagagtagt accaaaggca gcaccttctg atttcataat ccaaaatgga CD 151 aaattggcta tggagattTc gtgcggtcag aaatttatac ggacacgcag CD 201 gggttcgata ggaaagtcgt ttcaatccaa tccattcttg gggtcaaata CD 251 aagacaaagg atatgtcaat gacctagcac gacaaagcac tctccgaggg CD 301 catggaatgt ttcatttttt ggtcagaatc tcgacagtaa tgtctctctt CD 351 agattctctg gtggaaatac gggaaaactc cattcaattc tcgatggaaa CD 401 cggagttttg cgaattctcc ccggaactag aagatcattt tgagatcttc CD 451 gaacatattc gagggttcaa tgtaactatt gtcacttcag ccaacacaca CD 501 agatgagact ttactacTgt ggagcggctt tttgcaaaaa gatgagggag CD 551 aaactcagta a SQ SEQUENCE 187 AA; MFPLHFHYED VSRQDLLLKL NYANVMDVPG LCEIRVVPKA APSDFIIQNG KLAMEISCGQ KFIRTRRGSI GKSFQSNPFL GSNKDKGYVN DLARQSTLRG HGMFHFLVRI STVMSLLDSL VEIRENSIQF SMETEFCEFS PELEDHFEIF EHIRGFNVTI VTSANTQDET LLLWSGFLQK DEGETQ* // ID BA000009_73 STANDARD; PRT; 316 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : rps4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99356.2 FT PROTEIN_NAME : ribosomal protein S4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 191832 - 192779 FT DIRECTIONS : positive FT EDITING : 17 R(Cgg) -> W(Tgg) FT EDITING : 45 P(Ccg) -> S(Tcg) FT EDITING : 65 H(Cat) -> Y(Tat) FT EDITING : 89 P(cCa) -> L(cTa) FT EDITING : 112 P(cCg) -> L(cTg) FT EDITING : 156 F(ttC) -> F(ttT) FT EDITING : 161 S(tCa) -> L(tTa) FT EDITING : 284 S(tCt) -> F(tTt) FT EDITING : 301 P(cCa) -> L(cTa) FT EDITING : 304 P(cCt) -> L(cTt) FT EDITING : 306 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 948 NT; CD 1 atgactgcat taagatttaa aacttgtcgt ctagtttcag gaaatgttCg CD 51 gaataaagaa cttacactat cgcaacgcat cgctctccga aaatggagaa CD 101 tgaagaaaaa atctattaag aaaaagatgt atCcgagaaa aaatcgtaac CD 151 agttacatac aattacgaac tacacgaaag ttgtcccttt ttCatgggaa CD 201 tttacccatc acaaagatgc acagaagaac aaaacgaact tcatatatcc CD 251 cttttctact caatcCagaa acaagattgg acgttattct ggttcgtcta CD 301 catttttgtg aaactattcc tcaagcaagg cagcCgataa gtcatcgaaa CD 351 agtgtgtgtg aataatggaa tagtaaacat tagtcatttt aaagtttccc CD 401 acggtgatat aatatctttt caagaaaatt acgcgagaac ccgcggtgaa CD 451 gaaataagga aatttttCta tatcaaaata tCagttgaaa aaatcatagg CD 501 caaattaagg ggtcaccggg gaagactgcg gagcagaagc aaaacagaat CD 551 ggttccgccg agtaagaatg cggagcagaa gcaaaacaga atggttccgc CD 601 cgactcaaaa ctaagaaggg atgccgccta ctactaaaag accggttttt CD 651 gcaaaagtta cattcttcta tgcaagaaca agacttagaa agaacaaaga CD 701 agtttggatc cgacgctgag cacaacagaa tgaagaggaa tttttatcac CD 751 tccgtgacct tattcttatc gaagaagaga agaatcaaaa ggatagaact CD 801 acctactcat tattcggagg tcaatcatag aacactaaaa gctgtggtat CD 851 Cttatggacc taacatagat cacatccctc acgacataag attgaaagat CD 901 cCaaaccttc CtcttCggag cggaaaggga cgtggccaaa acacataa FT EDITED CDNA CD 1 atgactgcat taagatttaa aacttgtcgt ctagtttcag gaaatgttTg CD 51 gaataaagaa cttacactat cgcaacgcat cgctctccga aaatggagaa CD 101 tgaagaaaaa atctattaag aaaaagatgt atTcgagaaa aaatcgtaac CD 151 agttacatac aattacgaac tacacgaaag ttgtcccttt ttTatgggaa CD 201 tttacccatc acaaagatgc acagaagaac aaaacgaact tcatatatcc CD 251 cttttctact caatcTagaa acaagattgg acgttattct ggttcgtcta CD 301 catttttgtg aaactattcc tcaagcaagg cagcTgataa gtcatcgaaa CD 351 agtgtgtgtg aataatggaa tagtaaacat tagtcatttt aaagtttccc CD 401 acggtgatat aatatctttt caagaaaatt acgcgagaac ccgcggtgaa CD 451 gaaataagga aatttttTta tatcaaaata tTagttgaaa aaatcatagg CD 501 caaattaagg ggtcaccggg gaagactgcg gagcagaagc aaaacagaat CD 551 ggttccgccg agtaagaatg cggagcagaa gcaaaacaga atggttccgc CD 601 cgactcaaaa ctaagaaggg atgccgccta ctactaaaag accggttttt CD 651 gcaaaagtta cattcttcta tgcaagaaca agacttagaa agaacaaaga CD 701 agtttggatc cgacgctgag cacaacagaa tgaagaggaa tttttatcac CD 751 tccgtgacct tattcttatc gaagaagaga agaatcaaaa ggatagaact CD 801 acctactcat tattcggagg tcaatcatag aacactaaaa gctgtggtat CD 851 Tttatggacc taacatagat cacatccctc acgacataag attgaaagat CD 901 cTaaaccttc TtcttTggag cggaaaggga cgtggccaaa acacataa SQ SEQUENCE 316 AA; MTALRFKTCR LVSGNVWNKE LTLSQRIALR KWRMKKKSIK KKMYSRKNRN SYIQLRTTRK LSLFYGNLPI TKMHRRTKRT SYIPFLLNLE TRLDVILVRL HFCETIPQAR QLISHRKVCV NNGIVNISHF KVSHGDIISF QENYARTRGE EIRKFFYIKI LVEKIIGKLR GHRGRLRSRS KTEWFRRVRM RSRSKTEWFR RLKTKKGCRL LLKDRFLQKL HSSMQEQDLE RTKKFGSDAE HNRMKRNFYH SVTLFLSKKR RIKRIELPTH YSEVNHRTLK AVVFYGPNID HIPHDIRLKD LNLLLWSGKG RGQNT* // ID BA000009_75 STANDARD; PRT; 206 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : nad6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99358.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 193388 - 194005 FT DIRECTIONS : positive FT EDITING : 9 P(cCg) -> L(cTg) FT EDITING : 30 P(CCC) -> F(TTT) FT EDITING : 32 P(CCa) -> L(TTa) FT EDITING : 35 R(Cgc) -> C(Tgc) FT EDITING : 49 S(tCc) -> F(tTc) FT EDITING : 54 P(cCa) -> L(cTa) FT EDITING : 64 S(tCa) -> L(tTa) FT EDITING : 190 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 618 NT; CD 1 atgatacttt ctgttttgtc gagccCggct ttggtctctg gtttgatggt CD 51 tgtacgtgct aaaaatccgg tacattccgt tttgtttCCC atcCCagtct CD 101 ttCgcaacac ttcaggttta cttcttttgt taggtctcga tttttCcgct CD 151 atgatcttcc Cagtagttta tataggagct atagccgttt Cattcctatt CD 201 cgttgttatg atgttccata ttcaaatagc ggagattcac gaagaagtat CD 251 tgcgctattt accagtgagt ggtattattg gactgatctt ttggtgggaa CD 301 atgttcttca ttttagataa tgaaaccatt ccattactac caacccaaag CD 351 aaatacgacc tctctgagat atacggttta tgccggaaag gtacgaagtt CD 401 ggactaattt ggaaacattg ggcaatttac tttatactta ctattttgtc CD 451 tggtttttgg tttctagtct tattttatta gtagccatga ttggggctat CD 501 agtactgact atgcatagga ctactaaggt gaaaagacag gatgtattcc CD 551 gacgaaatgc tattgattCt agaaggacta taatgaagag gacgacagac CD 601 ccactcacga tctactaa FT EDITED CDNA CD 1 atgatacttt ctgttttgtc gagccTggct ttggtctctg gtttgatggt CD 51 tgtacgtgct aaaaatccgg tacattccgt tttgtttTTT atcTTagtct CD 101 ttTgcaacac ttcaggttta cttcttttgt taggtctcga tttttTcgct CD 151 atgatcttcc Tagtagttta tataggagct atagccgttt Tattcctatt CD 201 cgttgttatg atgttccata ttcaaatagc ggagattcac gaagaagtat CD 251 tgcgctattt accagtgagt ggtattattg gactgatctt ttggtgggaa CD 301 atgttcttca ttttagataa tgaaaccatt ccattactac caacccaaag CD 351 aaatacgacc tctctgagat atacggttta tgccggaaag gtacgaagtt CD 401 ggactaattt ggaaacattg ggcaatttac tttatactta ctattttgtc CD 451 tggtttttgg tttctagtct tattttatta gtagccatga ttggggctat CD 501 agtactgact atgcatagga ctactaaggt gaaaagacag gatgtattcc CD 551 gacgaaatgc tattgattTt agaaggacta taatgaagag gacgacagac CD 601 ccactcacga tctactaa SQ SEQUENCE 206 AA; MILSVLSSLA LVSGLMVVRA KNPVHSVLFF ILVFCNTSGL LLLLGLDFFA MIFLVVYIGA IAVLFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE MFFILDNETI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYFV WFLVSSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMKRTTD PLTIY* // ID BA000009_78 STANDARD; PRT; 116 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : orf115b FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA99443.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 199520 - 199867 FT DIRECTIONS : negative FT EDITING : 19 S(tCg) -> L(tTg) FT EDITING : 22 P(Cca) -> S(Tca) FT EDITING : 34 R(Cgt) -> C(Tgt) FT EDITING : 36 P(cCa) -> L(cTa) FT EDITING : 57 P(Ccc) -> S(Tcc) FT EDITING : 76 R(Cgt) -> C(Tgt) FT EDITING : 81 S(tCg) -> L(tTg) FT EDITING : 91 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 348 NT; CD 1 atgatcaaat tacaacctaa gatctatgac tatattatgt taactgttcg CD 51 tatttCgttc attCcatcgg tatgctccca gttacctgta attgtgatcC CD 101 gtttgcCaga actgaggggt ctttctgtgg aaaccttcac gaacaatcgt CD 151 cgttttttga tggtttttCc ccttctcaca gctgctcttt ccacacctcc CD 201 ggatatctgg tgccaaattg tcgccCgttt ccttatttct tCgataatag CD 251 agttggctat ctttgtggca tCgattgtac aagttcgtga agaaggctgg CD 301 acgagtggaa tgagggggag cggctcgatc gacaaaaaag aagagtag FT EDITED CDNA CD 1 atgatcaaat tacaacctaa gatctatgac tatattatgt taactgttcg CD 51 tatttTgttc attTcatcgg tatgctccca gttacctgta attgtgatcT CD 101 gtttgcTaga actgaggggt ctttctgtgg aaaccttcac gaacaatcgt CD 151 cgttttttga tggtttttTc ccttctcaca gctgctcttt ccacacctcc CD 201 ggatatctgg tgccaaattg tcgccTgttt ccttatttct tTgataatag CD 251 agttggctat ctttgtggca tTgattgtac aagttcgtga agaaggctgg CD 301 acgagtggaa tgagggggag cggctcgatc gacaaaaaag aagagtag SQ SEQUENCE 116 AA; MIKLQPKIYD YIMLTVRILF ISSVCSQLPV IVICLLELRG LSVETFTNNR RFLMVFSLLT AALSTPPDIW CQIVACFLIS LIIELAIFVA LIVQVREEGW TSGMRGSGSI DKKEE* // ID BA000009_80 STANDARD; PRT; 258 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99445.2 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 200936 - 201709 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 31 P(Cca) -> S(Tca) FT EDITING : 57 S(tCa) -> L(tTa) FT EDITING : 106 R(Cgt) -> C(Tgt) FT EDITING : 152 S(tCa) -> L(tTa) FT EDITING : 172 P(Cct) -> S(Tct) FT EDITING : 173 H(Cat) -> Y(Tat) FT EDITING : 180 S(tCa) -> L(tTa) FT EDITING : 194 S(tCa) -> L(tTa) FT EDITING : 240 H(Cat) -> Y(Tat) FT EDITING : 254 T(aCa) -> I(aTa) FT EDITING : 258 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 774 NT; CD 1 aCgattacgc ccaacagccc acttgagcaa ttttccattc tcccattgat CD 51 tcctatgaaa ataggaaact tgtatttctc attcacaaat Ccatctttgt CD 101 ttatgctgct aactctcagt ttggtcctac ttctgcttca ttttgttact CD 151 aaaaagggag gaggaaactC agtaccaaat gtttggcaat ccttggtaga CD 201 gcttatttat gatttcgtgc tgaacctggt aaacgaacaa ataggtggtc CD 251 tttccggaaa tgttaaacaa aagtttttcc cttgcatctt ggtcactttt CD 301 acttttttgt tatttCgtaa tctccagggt atgataccct atagctttac CD 351 agttacaagt cattttctca ttactttggg tctttcattt tccattttta CD 401 ttggcattac tatagtggga tttcaaagaa atgggcttca ttttttaagc CD 451 ttctCattac ctgcaggagt cccgctgccg ttagcacctt ttttagtact CD 501 ccttgagcta atcCctCatt gttttcgcgc attaagctCa ggaatacgtt CD 551 tatttgctaa tatgatggcc ggtcatagtt Cagtaaagat tttaagtggg CD 601 ttcgcttgga ctatgctatg tatgaatgat cttttatatt tcataggaga CD 651 tcttggtcct ttatttatag ttcttgcatt aaccggtctt gaattaggtg CD 701 tagctatatt acaagctCat gtttttacga tcttaatctg tatttacttg CD 751 aatgatgcta Caaatctcca tCaa FT EDITED CDNA CD 1 aTgattacgc ccaacagccc acttgagcaa ttttccattc tcccattgat CD 51 tcctatgaaa ataggaaact tgtatttctc attcacaaat Tcatctttgt CD 101 ttatgctgct aactctcagt ttggtcctac ttctgcttca ttttgttact CD 151 aaaaagggag gaggaaactT agtaccaaat gtttggcaat ccttggtaga CD 201 gcttatttat gatttcgtgc tgaacctggt aaacgaacaa ataggtggtc CD 251 tttccggaaa tgttaaacaa aagtttttcc cttgcatctt ggtcactttt CD 301 acttttttgt tatttTgtaa tctccagggt atgataccct atagctttac CD 351 agttacaagt cattttctca ttactttggg tctttcattt tccattttta CD 401 ttggcattac tatagtggga tttcaaagaa atgggcttca ttttttaagc CD 451 ttctTattac ctgcaggagt cccgctgccg ttagcacctt ttttagtact CD 501 ccttgagcta atcTctTatt gttttcgcgc attaagctTa ggaatacgtt CD 551 tatttgctaa tatgatggcc ggtcatagtt Tagtaaagat tttaagtggg CD 601 ttcgcttgga ctatgctatg tatgaatgat cttttatatt tcataggaga CD 651 tcttggtcct ttatttatag ttcttgcatt aaccggtctt gaattaggtg CD 701 tagctatatt acaagctTat gtttttacga tcttaatctg tatttacttg CD 751 aatgatgcta Taaatctcca tTaa SQ SEQUENCE 258 AA; MITPNSPLEQ FSILPLIPMK IGNLYFSFTN SSLFMLLTLS LVLLLLHFVT KKGGGNLVPN VWQSLVELIY DFVLNLVNEQ IGGLSGNVKQ KFFPCILVTF TFLLFCNLQG MIPYSFTVTS HFLITLGLSF SIFIGITIVG FQRNGLHFLS FLLPAGVPLP LAPFLVLLEL ISYCFRALSL GIRLFANMMA GHSLVKILSG FAWTMLCMND LLYFIGDLGP LFIVLALTGL ELGVAILQAY VFTILICIYL NDAINLH* // ID BA000009_82 STANDARD; PRT; 392 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : nad7 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99447.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 7 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 45/2 FT INTRON 68/2 FT INTRON 224/1 FT INTRON 305/2 FT EDITING : 23 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1176 NT; CD 1 atgaacagac aaatcaaaaa tttcactttg aatttcggac ctcaacatcc CD 51 tgctgctcat ggtgtttCac gattagtatt ggaaatgaac ggagaagtgg CD 101 tggaacgtgc agaaccacat attggattac tccatagagg gactgagaaa CD 151 ttaatagagt acaaaactta tcttcaagct ttaccttatt ttgatcgttt CD 201 agactatgtt tctatgatgg cccaagaaca cgctcattct tcagccgtag CD 251 agagactttt gaattgcgag gtaccattac gagctcaata tatacgagtg CD 301 ttattccgtg aaataactcg aatttcaaat cattcacttg ctttaactac CD 351 tcatgctatg gatgtgggag cattaactcc gttcctgtgg gcttttgagg CD 401 agcgagagaa attgttggaa ttctatgaaa gagtcccggg agccaggatg CD 451 catgccagtt tcatacgacc aggtggagtg gcacaagatc tgcctcttgg CD 501 cttatgtcga gatattgatt cctccacaca acaatttgct tctcgtatcg CD 551 acgaattaga agagatgtca accggcaacc gtatctggaa acaacgatta CD 601 gtggatattg gtactgtcac tgcgcagcaa gcaaaggatt ggggcttcag CD 651 tggtgtaatg ttaagaggtc caggggtatg ctgggatttg cgaagagcag CD 701 caccttacga tgtttatgac caattggatt ttgacgtacc agtaggtacc CD 751 agaggagatc gctatgatcg ttactgtatc cgtatcgaag agatgcgaca CD 801 aagtgttcgg atcattgtgc aatgtcttaa tcaaatgcct agtggcatga CD 851 tcaaagccga tgatcgtaag ctatgtcctc catcacgata tcgaatgaaa CD 901 ctatccatgg aatcctcaat tcaccatttc gaaccttata cagaagggtt CD 951 ttccgtacca gctccttcta cctataccgc agttgaagca cctaaaggag CD 1001 aatttggtgt ctttctggtc agtaatggaa gcaatcgtcc ttaccgtcgt CD 1051 aaaataagag cacctggctc tgcccattca caaggactcg attctatgtc CD 1101 caaacatcac atgccagccg atgtggtcac catcataggt actcaagata CD 1151 ttgtgtctgg agaggtggat agatag FT EDITED CDNA CD 1 atgaacagac aaatcaaaaa tttcactttg aatttcggac ctcaacatcc CD 51 tgctgctcat ggtgtttTac gattagtatt ggaaatgaac ggagaagtgg CD 101 tggaacgtgc agaaccacat attggattac tccatagagg gactgagaaa CD 151 ttaatagagt acaaaactta tcttcaagct ttaccttatt ttgatcgttt CD 201 agactatgtt tctatgatgg cccaagaaca cgctcattct tcagccgtag CD 251 agagactttt gaattgcgag gtaccattac gagctcaata tatacgagtg CD 301 ttattccgtg aaataactcg aatttcaaat cattcacttg ctttaactac CD 351 tcatgctatg gatgtgggag cattaactcc gttcctgtgg gcttttgagg CD 401 agcgagagaa attgttggaa ttctatgaaa gagtcccggg agccaggatg CD 451 catgccagtt tcatacgacc aggtggagtg gcacaagatc tgcctcttgg CD 501 cttatgtcga gatattgatt cctccacaca acaatttgct tctcgtatcg CD 551 acgaattaga agagatgtca accggcaacc gtatctggaa acaacgatta CD 601 gtggatattg gtactgtcac tgcgcagcaa gcaaaggatt ggggcttcag CD 651 tggtgtaatg ttaagaggtc caggggtatg ctgggatttg cgaagagcag CD 701 caccttacga tgtttatgac caattggatt ttgacgtacc agtaggtacc CD 751 agaggagatc gctatgatcg ttactgtatc cgtatcgaag agatgcgaca CD 801 aagtgttcgg atcattgtgc aatgtcttaa tcaaatgcct agtggcatga CD 851 tcaaagccga tgatcgtaag ctatgtcctc catcacgata tcgaatgaaa CD 901 ctatccatgg aatcctcaat tcaccatttc gaaccttata cagaagggtt CD 951 ttccgtacca gctccttcta cctataccgc agttgaagca cctaaaggag CD 1001 aatttggtgt ctttctggtc agtaatggaa gcaatcgtcc ttaccgtcgt CD 1051 aaaataagag cacctggctc tgcccattca caaggactcg attctatgtc CD 1101 caaacatcac atgccagccg atgtggtcac catcataggt actcaagata CD 1151 ttgtgtctgg agaggtggat agatag SQ SEQUENCE 392 AA; MNRQIKNFTL NFGPQHPAAH GVLRLVLEMN GEVVERAEPH IGLLHRGTEK LIEYKTYLQA LPYFDRLDYV SMMAQEHAHS SAVERLLNCE VPLRAQYIRV LFREITRISN HSLALTTHAM DVGALTPFLW AFEEREKLLE FYERVPGARM HASFIRPGGV AQDLPLGLCR DIDSSTQQFA SRIDELEEMS TGNRIWKQRL VDIGTVTAQQ AKDWGFSGVM LRGPGVCWDL RRAAPYDVYD QLDFDVPVGT RGDRYDRYCI RIEEMRQSVR IIVQCLNQMP SGMIKADDRK LCPPSRYRMK LSMESSIHHF EPYTEGFSVP APSTYTAVEA PKGEFGVFLV SNGSNRPYRR KIRAPGSAHS QGLDSMSKHH MPADVVTIIG TQDIVSGEVD R* // ID BA000009_83 STANDARD; PRT; 156 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : orf155b FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA99448.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 218341 - 218808 FT DIRECTIONS : positive FT EDITING : 8 H(Cat) -> Y(Tat) FT EDITING : 10 S(tCa) -> L(tTa) FT EDITING : 32 R(Cgt) -> C(Tgt) FT EDITING : 38 S(tCa) -> L(tTa) FT EDITING : 41 S(tCa) -> L(tTa) FT EDITING : 75 P(Ccg) -> S(Tcg) FT EDITING : 104 S(tCc) -> F(tTc) FT EDITING : 119 S(tCa) -> L(tTa) FT EDITING : 153 R(Cgt) -> C(Tgt) FT CODON_START : 1 CL CDNALEN 468 NT; CD 1 atgatggccc aagaacacgc tCattcttCa gccgtagaga gacttttgaa CD 51 ttgcgaggta ccattacgag ctcaatatat acgagtgtta ttcCgtgaaa CD 101 taactcgaat ttCaaatcat tCacttgctt taactactca tgctatggat CD 151 gtgggagcat taactccgtt cctgtgggct tttgaggagc gagagaaatt CD 201 gttggaattc tatgaaagag tcCcgggagc caggatgcat gccagtttca CD 251 tacgaccagg tggagtggca caagatctgc ctcttggctt atgtcgagat CD 301 attgattcct Ccacacaaca atttgcttct cgtatcgacg aattagaaga CD 351 gatgtCaacc ggcaaccgta tctggaaaca acgattagtg gatattggta CD 401 ctgtcactgc gcagcaagca aaggattggg gcttcagtgg tgtaatgtta CD 451 agaggtCgtg cgacatga FT EDITED CDNA CD 1 atgatggccc aagaacacgc tTattcttTa gccgtagaga gacttttgaa CD 51 ttgcgaggta ccattacgag ctcaatatat acgagtgtta ttcTgtgaaa CD 101 taactcgaat ttTaaatcat tTacttgctt taactactca tgctatggat CD 151 gtgggagcat taactccgtt cctgtgggct tttgaggagc gagagaaatt CD 201 gttggaattc tatgaaagag tcTcgggagc caggatgcat gccagtttca CD 251 tacgaccagg tggagtggca caagatctgc ctcttggctt atgtcgagat CD 301 attgattcct Tcacacaaca atttgcttct cgtatcgacg aattagaaga CD 351 gatgtTaacc ggcaaccgta tctggaaaca acgattagtg gatattggta CD 401 ctgtcactgc gcagcaagca aaggattggg gcttcagtgg tgtaatgtta CD 451 agaggtTgtg cgacatga SQ SEQUENCE 156 AA; MMAQEHAYSL AVERLLNCEV PLRAQYIRVL FCEITRILNH LLALTTHAMD VGALTPFLWA FEEREKLLEF YERVSGARMH ASFIRPGGVA QDLPLGLCRD IDSFTQQFAS RIDELEEMLT GNRIWKQRLV DIGTVTAQQA KDWGFSGVML RGCAT* // ID BA000009_86 STANDARD; PRT; 149 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : rps7 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99451.2 FT PROTEIN_NAME : ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 231651 - 232097 FT DIRECTIONS : positive FT EDITING : 39 P(cCa) -> L(cTa) FT EDITING : 111 S(tCa) -> L(tTa) FT EDITING : 142 F(ttC) -> F(ttT) FT CODON_START : 1 CL CDNALEN 447 NT; CD 1 atggggggct tagatagtga gcaaaaacaa ttgatcaaga aattggtcaa CD 51 ctttcacatg aaagaaggta aaagaacgaa ggttcgtgct attgtttatc CD 101 aaacttttca tcgccCagct cgaactgaag gcgatgtaat caaacttatg CD 151 attgacgccg tagagaatat aaagcccata tgcaaagtag aaaaagtcag CD 201 agtagcaggt actatttatg atgtccccgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggatccttg aagcagcttt caaacgacgt CD 301 atatcctaca ggataagctt agagaaatgt tCatttgatg agatactgga CD 351 tgcttaccga aagaggggaa tttcgcgtaa gaaaagggag aatcttcatg CD 401 gactggcttc cgccaatcga agtttCgcgc atttcagatg gtggtaa FT EDITED CDNA CD 1 atggggggct tagatagtga gcaaaaacaa ttgatcaaga aattggtcaa CD 51 ctttcacatg aaagaaggta aaagaacgaa ggttcgtgct attgtttatc CD 101 aaacttttca tcgccTagct cgaactgaag gcgatgtaat caaacttatg CD 151 attgacgccg tagagaatat aaagcccata tgcaaagtag aaaaagtcag CD 201 agtagcaggt actatttatg atgtccccgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggatccttg aagcagcttt caaacgacgt CD 301 atatcctaca ggataagctt agagaaatgt tTatttgatg agatactgga CD 351 tgcttaccga aagaggggaa tttcgcgtaa gaaaagggag aatcttcatg CD 401 gactggcttc cgccaatcga agtttTgcgc atttcagatg gtggtaa SQ SEQUENCE 149 AA; MGGLDSEQKQ LIKKLVNFHM KEGKRTKVRA IVYQTFHRLA RTEGDVIKLM IDAVENIKPI CKVEKVRVAG TIYDVPGIVA RDRQQTLAIR WILEAAFKRR ISYRISLEKC LFDEILDAYR KRGISRKKRE NLHGLASANR SFAHFRWW* // ID BA000009_88 STANDARD; PRT; 261 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : cox2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99453.2 FT PROTEIN_NAME : cytochrome c oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 128/1 FT EDITING : 46 L(ctC) -> L(ctT) FT EDITING : 54 S(tCa) -> L(tTa) FT EDITING : 85 R(Cgg) -> W(Tgg) FT EDITING : 127 R(Cgg) -> W(Tgg) FT EDITING : 148 T(aCg) -> M(aTg) FT EDITING : 154 P(cCa) -> L(cTa) FT EDITING : 159 S(tCa) -> L(tTa) FT EDITING : 194 S(tCa) -> L(tTa) FT EDITING : 248 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 783 NT; CD 1 atgattgttc gagaatggct attcttcaca atggctcctt gtgatgcagc CD 51 ggaaccatgg caattaggat ttcaagacgc agcaacacct atgatgcaag CD 101 gaataatcga cttacatcat gatatctttt tcttcctCat tcttattttg CD 151 gttttcgtat Catggatctt ggttcgcgct ttatggcatt tccactataa CD 201 aaaaaatcca atcccgcaaa ggattgttca tggaactact atcgagatta CD 251 ttCggaccat ctttcccagt atcatcctga tgttcattgc tataccatca CD 301 tttgctctgt tatactcaat ggacgaggta gtagtagatc cagccattac CD 351 tatcaaagct attggacatc aatggtatCg gacttatgag tattcggact CD 401 ataacagttc cgatgaacag tcactcactt ttgacagtta taCgattcca CD 451 gaagatgatc Cagaattggg tcaatCacgt ttattagaag tggacaatag CD 501 agtggttgta ccagccaaaa ctcatatacg tattattgta acatccgctg CD 551 atgtacttca tagttgggct gtaccttcct Caggtgtcaa atgtgatgct CD 601 gtacctggtc gtttaaatca gacctctatt ttggtacaac gagaaggagt CD 651 ttactatggt cagtgcagtg aaatttgtgg aactaatcat gcttttatgc CD 701 ctatcgtcgt agaagctgtt tctaggaaag attatggttc tCgggtatct CD 751 aatcaattaa tcccccaaac cggagaagct taa FT EDITED CDNA CD 1 atgattgttc gagaatggct attcttcaca atggctcctt gtgatgcagc CD 51 ggaaccatgg caattaggat ttcaagacgc agcaacacct atgatgcaag CD 101 gaataatcga cttacatcat gatatctttt tcttcctTat tcttattttg CD 151 gttttcgtat Tatggatctt ggttcgcgct ttatggcatt tccactataa CD 201 aaaaaatcca atcccgcaaa ggattgttca tggaactact atcgagatta CD 251 ttTggaccat ctttcccagt atcatcctga tgttcattgc tataccatca CD 301 tttgctctgt tatactcaat ggacgaggta gtagtagatc cagccattac CD 351 tatcaaagct attggacatc aatggtatTg gacttatgag tattcggact CD 401 ataacagttc cgatgaacag tcactcactt ttgacagtta taTgattcca CD 451 gaagatgatc Tagaattggg tcaatTacgt ttattagaag tggacaatag CD 501 agtggttgta ccagccaaaa ctcatatacg tattattgta acatccgctg CD 551 atgtacttca tagttgggct gtaccttcct Taggtgtcaa atgtgatgct CD 601 gtacctggtc gtttaaatca gacctctatt ttggtacaac gagaaggagt CD 651 ttactatggt cagtgcagtg aaatttgtgg aactaatcat gcttttatgc CD 701 ctatcgtcgt agaagctgtt tctaggaaag attatggttc tTgggtatct CD 751 aatcaattaa tcccccaaac cggagaagct taa SQ SEQUENCE 261 AA; MIVREWLFFT MAPCDAAEPW QLGFQDAATP MMQGIIDLHH DIFFFLILIL VFVLWILVRA LWHFHYKKNP IPQRIVHGTT IEIIWTIFPS IILMFIAIPS FALLYSMDEV VVDPAITIKA IGHQWYWTYE YSDYNSSDEQ SLTFDSYMIP EDDLELGQLR LLEVDNRVVV PAKTHIRIIV TSADVLHSWA VPSLGVKCDA VPGRLNQTSI LVQREGVYYG QCSEICGTNH AFMPIVVEAV SRKDYGSWVS NQLIPQTGEA * // ID BA000009_91 STANDARD; PRT; 656 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : mat-r FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99458.2 FT PROTEIN_NAME : maturase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 243932 - 245899 FT DIRECTIONS : positive FT EDITING : 9 P(cCc) -> L(cTc) FT EDITING : 65 P(Cca) -> S(Tca) FT EDITING : 109 P(cCa) -> L(cTa) FT EDITING : 138 S(tCg) -> L(tTg) FT EDITING : 560 S(tCc) -> F(tTc) FT EDITING : 567 P(cCt) -> L(cTt) FT EDITING : 574 R(Cgc) -> C(Tgc) FT EDITING : 578 Y(taC) -> Y(taT) FT EDITING : 596 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1968 NT; CD 1 atgaaagagg cgatcagaat ggtacCcgaa tccatttacg atcccgagtt CD 51 tccagacaca tcgcacttcc gctcgggtcg aggctgccat tcggccctaa CD 101 gacggattaa agaagagtgg ggaacctctc gctggttttt ggaattcgac CD 151 atcaggaagt gttttcacac catcgaccga catcgactca tcCcaatctt CD 201 taaggaagag atcgacgatc ccaagttctt ttactcgatt cagaaagtct CD 251 tttctgccgg acgactcgta ggaggtgaga agggccctta ctccgtccca CD 301 cacagtgtac tactatcggc cctacCaggc aacatctact tacacaagct CD 351 cgatcaggag atagggagga ttcgacagaa gtacgaaatt ccgattgttc CD 401 agagaatcag atCggttcta ttaaagacaa gtcgtattga tgaccaagaa CD 451 aactctggag aagaagaaag cttcaacgct ccacaagaca acagagccat CD 501 cattgtggat agggtaaaaa gcatccaacg caaagcggcc tttcattccc CD 551 ttgtttcgtc gtggcacacc ctccccgcaa gcaccccccg gctcaggggg CD 601 gaccagaaaa ggcctttcgt tttcccccct tcgtcggccc ttaccgcctt CD 651 ccttaacaag ccctcgagcc tccttttcgc tgcgttcctc atagaagccg CD 701 ccgggttgac cccgaaggcc gaattctatg gtagagaatg ctgtaataat CD 751 aattgggcca tgagagacct ttttaagtat tgcaaaagaa agggcctgct CD 801 gatagagctg ggcgaggcag cgatactagt tatcaggtca gagaaaggcc CD 851 tggcccgtaa gctggccccc tttaaaaccc attacttaat aaggatttgt CD 901 tacgcgcgat atgccgacga cttactattg ggaatcgtgg gtgccgtaga CD 951 gcttctcata gaaatacaaa aacgtatcgc ccacttccta caatccggcc CD 1001 tgaacctttg ggtaggctct gcgggatcaa caacaatagc tgcacggagt CD 1051 acggtagaat tcctcggtac ggtcattcgg gaagtccctc cgaagacgac CD 1101 tcccatacaa tttttgcgag agctggagaa gcgtctacgg gtaaagcacc CD 1151 gtatccatat aactgcttgc cacttacgct ctgccattca ttccaagttt CD 1201 aggaacctag gtaatagtat cccgatcaaa cagctgacga aggggatgag CD 1251 caaaacaggg agtctactgg acgcggttca actagcggaa agtctttcca CD 1301 cagctagagt aagaagtccc caagtgagcg tattatggga gaccgtcaag CD 1351 cacatccggc aaggatcaag ggagatctcg ttgttgcata gctcaggtca CD 1401 gagcaaggtg ccatcggacg ttcaacaggc agtcttgcga tcgggcatga CD 1451 gtgtccggaa gttgtcattg tatactctcg cgggtcggaa ggcggcgggg CD 1501 gaaggagggg gacactggtc gagatctatc agcagcgaat tccccataca CD 1551 gatagaagcg cctatcaaaa agatactccg aaggcttcga gatcgaggtc CD 1601 tcattagccg aagaagaccc tggccaatcc acgtggcctg cttgacgaac CD 1651 gtcagcgacg gagacatcgt aaattggtCc gcgggcatcg cgataagtcC CD 1701 tctgtcctac tacaggtgcC gcgacaacct ttaCcaagtc cgaacgattg CD 1751 tcgactacca gatccgctgg tctgcaatat tcacccCagc ccacaagcac CD 1801 aaatcctcag cgcggaatat aatccaaaag tactccaaag acttaaatat CD 1851 agtaaatcaa gaaggtggca agacccttgc ggagttcccc aacagcatag CD 1901 agcttgggaa gctcggaccc ggtcaagatc cgaacaacaa agagcactca CD 1951 actactagtc tagtctag FT EDITED CDNA CD 1 atgaaagagg cgatcagaat ggtacTcgaa tccatttacg atcccgagtt CD 51 tccagacaca tcgcacttcc gctcgggtcg aggctgccat tcggccctaa CD 101 gacggattaa agaagagtgg ggaacctctc gctggttttt ggaattcgac CD 151 atcaggaagt gttttcacac catcgaccga catcgactca tcTcaatctt CD 201 taaggaagag atcgacgatc ccaagttctt ttactcgatt cagaaagtct CD 251 tttctgccgg acgactcgta ggaggtgaga agggccctta ctccgtccca CD 301 cacagtgtac tactatcggc cctacTaggc aacatctact tacacaagct CD 351 cgatcaggag atagggagga ttcgacagaa gtacgaaatt ccgattgttc CD 401 agagaatcag atTggttcta ttaaagacaa gtcgtattga tgaccaagaa CD 451 aactctggag aagaagaaag cttcaacgct ccacaagaca acagagccat CD 501 cattgtggat agggtaaaaa gcatccaacg caaagcggcc tttcattccc CD 551 ttgtttcgtc gtggcacacc ctccccgcaa gcaccccccg gctcaggggg CD 601 gaccagaaaa ggcctttcgt tttcccccct tcgtcggccc ttaccgcctt CD 651 ccttaacaag ccctcgagcc tccttttcgc tgcgttcctc atagaagccg CD 701 ccgggttgac cccgaaggcc gaattctatg gtagagaatg ctgtaataat CD 751 aattgggcca tgagagacct ttttaagtat tgcaaaagaa agggcctgct CD 801 gatagagctg ggcgaggcag cgatactagt tatcaggtca gagaaaggcc CD 851 tggcccgtaa gctggccccc tttaaaaccc attacttaat aaggatttgt CD 901 tacgcgcgat atgccgacga cttactattg ggaatcgtgg gtgccgtaga CD 951 gcttctcata gaaatacaaa aacgtatcgc ccacttccta caatccggcc CD 1001 tgaacctttg ggtaggctct gcgggatcaa caacaatagc tgcacggagt CD 1051 acggtagaat tcctcggtac ggtcattcgg gaagtccctc cgaagacgac CD 1101 tcccatacaa tttttgcgag agctggagaa gcgtctacgg gtaaagcacc CD 1151 gtatccatat aactgcttgc cacttacgct ctgccattca ttccaagttt CD 1201 aggaacctag gtaatagtat cccgatcaaa cagctgacga aggggatgag CD 1251 caaaacaggg agtctactgg acgcggttca actagcggaa agtctttcca CD 1301 cagctagagt aagaagtccc caagtgagcg tattatggga gaccgtcaag CD 1351 cacatccggc aaggatcaag ggagatctcg ttgttgcata gctcaggtca CD 1401 gagcaaggtg ccatcggacg ttcaacaggc agtcttgcga tcgggcatga CD 1451 gtgtccggaa gttgtcattg tatactctcg cgggtcggaa ggcggcgggg CD 1501 gaaggagggg gacactggtc gagatctatc agcagcgaat tccccataca CD 1551 gatagaagcg cctatcaaaa agatactccg aaggcttcga gatcgaggtc CD 1601 tcattagccg aagaagaccc tggccaatcc acgtggcctg cttgacgaac CD 1651 gtcagcgacg gagacatcgt aaattggtTc gcgggcatcg cgataagtcT CD 1701 tctgtcctac tacaggtgcT gcgacaacct ttaTcaagtc cgaacgattg CD 1751 tcgactacca gatccgctgg tctgcaatat tcacccTagc ccacaagcac CD 1801 aaatcctcag cgcggaatat aatccaaaag tactccaaag acttaaatat CD 1851 agtaaatcaa gaaggtggca agacccttgc ggagttcccc aacagcatag CD 1901 agcttgggaa gctcggaccc ggtcaagatc cgaacaacaa agagcactca CD 1951 actactagtc tagtctag SQ SEQUENCE 656 AA; MKEAIRMVLE SIYDPEFPDT SHFRSGRGCH SALRRIKEEW GTSRWFLEFD IRKCFHTIDR HRLISIFKEE IDDPKFFYSI QKVFSAGRLV GGEKGPYSVP HSVLLSALLG NIYLHKLDQE IGRIRQKYEI PIVQRIRLVL LKTSRIDDQE NSGEEESFNA PQDNRAIIVD RVKSIQRKAA FHSLVSSWHT LPASTPRLRG DQKRPFVFPP SSALTAFLNK PSSLLFAAFL IEAAGLTPKA EFYGRECCNN NWAMRDLFKY CKRKGLLIEL GEAAILVIRS EKGLARKLAP FKTHYLIRIC YARYADDLLL GIVGAVELLI EIQKRIAHFL QSGLNLWVGS AGSTTIAARS TVEFLGTVIR EVPPKTTPIQ FLRELEKRLR VKHRIHITAC HLRSAIHSKF RNLGNSIPIK QLTKGMSKTG SLLDAVQLAE SLSTARVRSP QVSVLWETVK HIRQGSREIS LLHSSGQSKV PSDVQQAVLR SGMSVRKLSL YTLAGRKAAG EGGGHWSRSI SSEFPIQIEA PIKKILRRLR DRGLISRRRP WPIHVACLTN VSDGDIVNWF AGIAISLLSY YRCCDNLYQV RTIVDYQIRW SAIFTLAHKH KSSARNIIQK YSKDLNIVNQ EGGKTLAEFP NSIELGKLGP GQDPNNKEHS TTSLV* // ID BA000009_100 STANDARD; PRT; 119 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : nad3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99467.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 263258 - 263614 FT DIRECTIONS : positive FT EDITING : 2 S(tCa) -> L(tTa) FT EDITING : 13 I(atC) -> I(atT) FT EDITING : 21 P(CCa) -> L(TTa) FT EDITING : 27 P(cCa) -> L(cTa) FT EDITING : 70 L(Ctt) -> F(Ttt) FT EDITING : 72 P(cCg) -> L(cTg) FT EDITING : 83 P(Cct) -> S(Tct) FT EDITING : 89 P(cCg) -> L(cTg) FT EDITING : 92 S(tCt) -> F(tTt) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 117 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 atgtCagaat ttgcgcctat ttgtatctat ttagtgatCa gtctgctagt CD 51 ttctttgatc CCactcggtg ttccttttcC attttcttct aatacttcga CD 101 cttatccaga aaaattgtcg gcctacgaat gtggtttcga tcctttcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatcttgttt caattttatt CD 201 tattatcCtt gatcCggaag taaccttttt ctttccttgg gcagtaCctc CD 251 tcaacaagat tgatcCgttt ggatCttggt ccatgatggc ctttttattg CD 301 attttaacga taggatttct ctatgaatgg aaaaggggtg cttCggatCg CD 351 ggagtaa FT EDITED CDNA CD 1 atgtTagaat ttgcgcctat ttgtatctat ttagtgatTa gtctgctagt CD 51 ttctttgatc TTactcggtg ttccttttcT attttcttct aatacttcga CD 101 cttatccaga aaaattgtcg gcctacgaat gtggtttcga tcctttcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatcttgttt caattttatt CD 201 tattatcTtt gatcTggaag taaccttttt ctttccttgg gcagtaTctc CD 251 tcaacaagat tgatcTgttt ggatTttggt ccatgatggc ctttttattg CD 301 attttaacga taggatttct ctatgaatgg aaaaggggtg cttTggatTg CD 351 ggagtaa SQ SEQUENCE 119 AA; MLEFAPICIY LVISLLVSLI LLGVPFLFSS NTSTYPEKLS AYECGFDPFG DARSRFDIRF YLVSILFIIF DLEVTFFFPW AVSLNKIDLF GFWSMMAFLL ILTIGFLYEW KRGALDWE* // ID BA000009_101 STANDARD; PRT; 126 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : rps12 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99468.2 FT PROTEIN_NAME : ribosomal protein S12 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 263663 - 264040 FT DIRECTIONS : positive FT EDITING : 24 S(tCg) -> L(tTg) FT EDITING : 34 R(Cgc) -> C(Tgc) FT EDITING : 35 P(cCg) -> L(cTg) FT EDITING : 66 H(Cac) -> Y(Tac) FT EDITING : 90 S(tCg) -> L(tTg) FT EDITING : 95 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 378 NT; CD 1 atgcctacaa taaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt Cggatcaatg tccccagaag caaggagtaC CD 101 gccCgcgtgt ttcaacgaga acaccgaaaa aacctaattc agctctacgt CD 151 aagatagcca aagtacggtt gagcaatcga catgatatat ttgctCacat CD 201 tccgggcgaa ggtcataatt tgcaggaaca ttctatggtc ttaataagag CD 251 gaggtagagt gaaagattCg ccaggtgtga aatCccattg tattcgagga CD 301 gtcaaggatt tgctgggaat tccggatcga agaagaggca gatcaaaata CD 351 tggtgcagaa aaacccaaat cgatatga FT EDITED CDNA CD 1 atgcctacaa taaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt Tggatcaatg tccccagaag caaggagtaT CD 101 gccTgcgtgt ttcaacgaga acaccgaaaa aacctaattc agctctacgt CD 151 aagatagcca aagtacggtt gagcaatcga catgatatat ttgctTacat CD 201 tccgggcgaa ggtcataatt tgcaggaaca ttctatggtc ttaataagag CD 251 gaggtagagt gaaagattTg ccaggtgtga aatTccattg tattcgagga CD 301 gtcaaggatt tgctgggaat tccggatcga agaagaggca gatcaaaata CD 351 tggtgcagaa aaacccaaat cgatatga SQ SEQUENCE 126 AA; MPTINQLIRH GREEKRRTDR TRALDQCPQK QGVCLRVSTR TPKKPNSALR KIAKVRLSNR HDIFAYIPGE GHNLQEHSMV LIRGGRVKDL PGVKFHCIRG VKDLLGIPDR RRGRSKYGAE KPKSI* // ID BA000009_104 STANDARD; PRT; 552 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : rps3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99471.2 FT PROTEIN_NAME : ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 271008 - 272663 FT DIRECTIONS : positive FT EDITING : 171 S(tCa) -> L(tTa) FT EDITING : 238 S(tCg) -> L(tTg) FT EDITING : 252 S(tCc) -> F(tTc) FT EDITING : 344 P(cCa) -> L(cTa) FT EDITING : 455 P(cCg) -> L(cTg) FT EDITING : 464 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 1656 NT; CD 1 atggcacgaa aaggaaatcc gatttcggta agacttgatc tgaatcgtag CD 51 ttcagattca agttggttta atgattatta ttatagtaaa ttagtatatc CD 101 aagatctcaa tctgagatct tattttggtt cgatacgtcc acctacgaga CD 151 cttacctttg gctttcgcct cggtaggtgt attattatac attttcaaaa CD 201 acgaacattc attaatttct ttcttcctcg tcgaccacaa cgacggaaac CD 251 gacgcaaaaa atccagaccc ggaaagacga agggccggtg gtgggaattg CD 301 gggaaagtcg ggccgatcga gtgtctttat tcaagcgagg gtagaaaaga CD 351 agaacgaaac gaagtgagag accgaagggc cgggaaaaga gtcgagtcga CD 401 tcaggcttga cgaccagaaa aagcaaaacg aaatccgggt ttggccaaaa CD 451 aagaagcaac gctatggata ccatgaccga tcaccatcga taaagaagaa CD 501 tctttctaaa tCacttcggg tcagcggggc cttcaagcat ccgaaatacg CD 551 ccgaggttgt aaatgacata gcctttctga tagaaaatga ttcttccttc CD 601 aaaaaaacga agttattcaa gttctttttc ccaaagaagt cacgctacga CD 651 cggcccgaca agtcatctac ttaaaaggac cctccctgca gtgcgccctt CD 701 ccttgaatta ttCggtcatg caatacttat tgaatacaaa gaaaaaaatg CD 751 cattCcgatc ccgtcctagt tctcaatcat ttcgtggcac cgggcgtggt CD 801 tgaaccatcc acgatgaata gagctaatgc gcagggagga agcttagata CD 851 agagaatacg ttctcgcatc gctttttttg tggaaagctc gaccagccag CD 901 aaaaagtgtt tggccgaagc caaaaagagg ttgacccact tcattcgcca CD 951 agcgaatgat cttcgcttcg cgggaagaag aaaaaccacc atctcgctct CD 1001 ttcctttctt cggtgctacc tttttctttc Caagggatgg agttagagtt CD 1051 tataataacc tgttttttaa agatgcccgg gaacaactcc taggtcaatt CD 1101 aaggataaaa tgttggaacc tcatgggtaa ggataaggta atgaaattga CD 1151 tagaaaaatt catagatcta ggtgggataa gagaattgat aaagggaata CD 1201 gagatgatga tagagatcat actgaaaaac ataagaattg cttacgggtc CD 1251 taactcttat ttgaacgaag tgaaaaaaat gcgatctttg ttgtctaata CD 1301 gaacaaacac taatacctta attgaatcgg tcaagatcaa atctgtttat CD 1351 caaagtgctt ctcCgattgc tcaagacata tcttttcaac Cgaaaaagaa CD 1401 aagaggatca tttcgttcta tttttagtaa aatagtgaaa aagattccat CD 1451 tagtaatgaa aaggggggta gaggggatcc gtatatgttg ttcaggtcga CD 1501 ttagaaggtg cagaaattgc tagaactgaa tgcggaaagt atggaaaaac CD 1551 atcttgtaat gtattacacc agaaaattga ttatgcttct gcggaagtat CD 1601 ctactcgtta cggaatcgta ggtgtcaaag tgtggatttc ttatagtcca CD 1651 aaataa FT EDITED CDNA CD 1 atggcacgaa aaggaaatcc gatttcggta agacttgatc tgaatcgtag CD 51 ttcagattca agttggttta atgattatta ttatagtaaa ttagtatatc CD 101 aagatctcaa tctgagatct tattttggtt cgatacgtcc acctacgaga CD 151 cttacctttg gctttcgcct cggtaggtgt attattatac attttcaaaa CD 201 acgaacattc attaatttct ttcttcctcg tcgaccacaa cgacggaaac CD 251 gacgcaaaaa atccagaccc ggaaagacga agggccggtg gtgggaattg CD 301 gggaaagtcg ggccgatcga gtgtctttat tcaagcgagg gtagaaaaga CD 351 agaacgaaac gaagtgagag accgaagggc cgggaaaaga gtcgagtcga CD 401 tcaggcttga cgaccagaaa aagcaaaacg aaatccgggt ttggccaaaa CD 451 aagaagcaac gctatggata ccatgaccga tcaccatcga taaagaagaa CD 501 tctttctaaa tTacttcggg tcagcggggc cttcaagcat ccgaaatacg CD 551 ccgaggttgt aaatgacata gcctttctga tagaaaatga ttcttccttc CD 601 aaaaaaacga agttattcaa gttctttttc ccaaagaagt cacgctacga CD 651 cggcccgaca agtcatctac ttaaaaggac cctccctgca gtgcgccctt CD 701 ccttgaatta ttTggtcatg caatacttat tgaatacaaa gaaaaaaatg CD 751 cattTcgatc ccgtcctagt tctcaatcat ttcgtggcac cgggcgtggt CD 801 tgaaccatcc acgatgaata gagctaatgc gcagggagga agcttagata CD 851 agagaatacg ttctcgcatc gctttttttg tggaaagctc gaccagccag CD 901 aaaaagtgtt tggccgaagc caaaaagagg ttgacccact tcattcgcca CD 951 agcgaatgat cttcgcttcg cgggaagaag aaaaaccacc atctcgctct CD 1001 ttcctttctt cggtgctacc tttttctttc Taagggatgg agttagagtt CD 1051 tataataacc tgttttttaa agatgcccgg gaacaactcc taggtcaatt CD 1101 aaggataaaa tgttggaacc tcatgggtaa ggataaggta atgaaattga CD 1151 tagaaaaatt catagatcta ggtgggataa gagaattgat aaagggaata CD 1201 gagatgatga tagagatcat actgaaaaac ataagaattg cttacgggtc CD 1251 taactcttat ttgaacgaag tgaaaaaaat gcgatctttg ttgtctaata CD 1301 gaacaaacac taatacctta attgaatcgg tcaagatcaa atctgtttat CD 1351 caaagtgctt ctcTgattgc tcaagacata tcttttcaac Tgaaaaagaa CD 1401 aagaggatca tttcgttcta tttttagtaa aatagtgaaa aagattccat CD 1451 tagtaatgaa aaggggggta gaggggatcc gtatatgttg ttcaggtcga CD 1501 ttagaaggtg cagaaattgc tagaactgaa tgcggaaagt atggaaaaac CD 1551 atcttgtaat gtattacacc agaaaattga ttatgcttct gcggaagtat CD 1601 ctactcgtta cggaatcgta ggtgtcaaag tgtggatttc ttatagtcca CD 1651 aaataa SQ SEQUENCE 552 AA; MARKGNPISV RLDLNRSSDS SWFNDYYYSK LVYQDLNLRS YFGSIRPPTR LTFGFRLGRC IIIHFQKRTF INFFLPRRPQ RRKRRKKSRP GKTKGRWWEL GKVGPIECLY SSEGRKEERN EVRDRRAGKR VESIRLDDQK KQNEIRVWPK KKQRYGYHDR SPSIKKNLSK LLRVSGAFKH PKYAEVVNDI AFLIENDSSF KKTKLFKFFF PKKSRYDGPT SHLLKRTLPA VRPSLNYLVM QYLLNTKKKM HFDPVLVLNH FVAPGVVEPS TMNRANAQGG SLDKRIRSRI AFFVESSTSQ KKCLAEAKKR LTHFIRQAND LRFAGRRKTT ISLFPFFGAT FFFLRDGVRV YNNLFFKDAR EQLLGQLRIK CWNLMGKDKV MKLIEKFIDL GGIRELIKGI EMMIEIILKN IRIAYGSNSY LNEVKKMRSL LSNRTNTNTL IESVKIKSVY QSASLIAQDI SFQLKKKRGS FRSIFSKIVK KIPLVMKRGV EGIRICCSGR LEGAEIARTE CGKYGKTSCN VLHQKIDYAS AEVSTRYGIV GVKVWISYSP K* // ID BA000009_106 STANDARD; PRT; 496 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : nad4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99473.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 154/2 FT INTRON 467/1 FT EDITING : 473 H(Cac) -> Y(Tac) FT EDITING : 478 P(cCg) -> L(cTg) FT EDITING : 480 R(Cgc) -> C(Tgc) FT CODON_START : 1 CL CDNALEN 1488 NT; CD 1 atgttagaac atttctgtga atgctattct gatctaagtg gtcttattct CD 51 gtgtcccgtg ctaggaagca ttactcttct tttcattcca aattcaagaa CD 101 tacgatcgat acgattgatt ggtctgtgcg cttctcttat tacttttttg CD 151 tattctcctg ttcttcggat acaatttgat ccttctacgg ccaaatctca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc catttttatt CD 251 tgggtataga cggtatctct ttattcttcg tgatattgac cacatttttg CD 301 atccctattt gcattttagt gggttggtct ggtatgagaa gttatgggaa CD 351 agagtatatt acagcatctc taattcgtga atttctaatg atcgccgtgt CD 401 tctgcatgct ggatcttcta ctattctatg ttctttccga aagcgtgcca CD 451 atccctatgt tcattattat aggggtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctttatac tttacttgga tctgttttta CD 551 tgctattagc tattctgttg attcttctcc aaacaggaac caccgattta CD 601 caaatcttat taaccacaga atttagtgag cggcgccaaa tctttttatg CD 651 gattgctttt ttcgcctctt tcgctgtcaa agttcctatg gtaccagttc CD 701 atatttggtt acccgaagct catgtagagg cacccacggc aggatccgtt CD 751 atcttggcag gaattctttt aaaattggga acttacgggt ttttaagatt CD 801 ttcaataccc atgtttcctg aagcgacact ttgtttcact cctttcattt CD 851 atactctaag cgcgattgct ataatatata cttccttgac cactttaaga CD 901 cagatcgatc ttaagaagat cattgcttac tcctcagtag cccatatgaa CD 951 ttttgtgact attggtatgt ttagtctgaa catacaggga attggaggta CD 1001 gcattctacc gatgttaagt catggactgg tttcttcagc cctttttcta CD 1051 tgtgttggtg ttctatatga ccgacataag actcgacttg ttagatatta CD 1101 cggaggttta gtgagcacca tgccgaattt ctctaccatt ttcttctttt CD 1151 tcactttagc caatatgagt ttacctggta ctagcagctt tatcggggaa CD 1201 tttctcatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 agcagcgctt gggatgattt taggcgcggc ctattccctt tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacccg acttcctcca taaattctcc CD 1351 gatccaaatg gcagagaagt tttcatattt ataccctttc ttgttggagt CD 1401 tgtttggatg ggtgttCacc ccaaagtgtt ccCggacCgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggaaaat ttcattga FT EDITED CDNA CD 1 atgttagaac atttctgtga atgctattct gatctaagtg gtcttattct CD 51 gtgtcccgtg ctaggaagca ttactcttct tttcattcca aattcaagaa CD 101 tacgatcgat acgattgatt ggtctgtgcg cttctcttat tacttttttg CD 151 tattctcctg ttcttcggat acaatttgat ccttctacgg ccaaatctca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc catttttatt CD 251 tgggtataga cggtatctct ttattcttcg tgatattgac cacatttttg CD 301 atccctattt gcattttagt gggttggtct ggtatgagaa gttatgggaa CD 351 agagtatatt acagcatctc taattcgtga atttctaatg atcgccgtgt CD 401 tctgcatgct ggatcttcta ctattctatg ttctttccga aagcgtgcca CD 451 atccctatgt tcattattat aggggtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctttatac tttacttgga tctgttttta CD 551 tgctattagc tattctgttg attcttctcc aaacaggaac caccgattta CD 601 caaatcttat taaccacaga atttagtgag cggcgccaaa tctttttatg CD 651 gattgctttt ttcgcctctt tcgctgtcaa agttcctatg gtaccagttc CD 701 atatttggtt acccgaagct catgtagagg cacccacggc aggatccgtt CD 751 atcttggcag gaattctttt aaaattggga acttacgggt ttttaagatt CD 801 ttcaataccc atgtttcctg aagcgacact ttgtttcact cctttcattt CD 851 atactctaag cgcgattgct ataatatata cttccttgac cactttaaga CD 901 cagatcgatc ttaagaagat cattgcttac tcctcagtag cccatatgaa CD 951 ttttgtgact attggtatgt ttagtctgaa catacaggga attggaggta CD 1001 gcattctacc gatgttaagt catggactgg tttcttcagc cctttttcta CD 1051 tgtgttggtg ttctatatga ccgacataag actcgacttg ttagatatta CD 1101 cggaggttta gtgagcacca tgccgaattt ctctaccatt ttcttctttt CD 1151 tcactttagc caatatgagt ttacctggta ctagcagctt tatcggggaa CD 1201 tttctcatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 agcagcgctt gggatgattt taggcgcggc ctattccctt tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacccg acttcctcca taaattctcc CD 1351 gatccaaatg gcagagaagt tttcatattt ataccctttc ttgttggagt CD 1401 tgtttggatg ggtgttTacc ccaaagtgtt ccTggacTgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggaaaat ttcattga SQ SEQUENCE 496 AA; MLEHFCECYS DLSGLILCPV LGSITLLFIP NSRIRSIRLI GLCASLITFL YSPVLRIQFD PSTAKSQFVE SLRWLPYENI HFYLGIDGIS LFFVILTTFL IPICILVGWS GMRSYGKEYI TASLIREFLM IAVFCMLDLL LFYVLSESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SVFMLLAILL ILLQTGTTDL QILLTTEFSE RRQIFLWIAF FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGILLKLG TYGFLRFSIP MFPEATLCFT PFIYTLSAIA IIYTSLTTLR QIDLKKIIAY SSVAHMNFVT IGMFSLNIQG IGGSILPMLS HGLVSSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNFSTI FFFFTLANMS LPGTSSFIGE FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DPNGREVFIF IPFLVGVVWM GVYPKVFLDC MHTSVSNLVQ HGKFH* // ID BA000009_107 STANDARD; PRT; 289 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : orf288 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA99474.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 282621 - 283487 FT DIRECTIONS : negative FT EDITING : 154 P(cCg) -> L(cTg) FT EDITING : 184 Y(taC) -> Y(taT) FT EDITING : 269 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 867 NT; CD 1 atgctattag ctattctgtt gattcttctc caaacaggaa ccaccgattt CD 51 acaaatctta ttaaccacag aatttagtga gcggcgccaa atctttttat CD 101 ggattgcttt tttcgcctct ttcgctgtca aagttcctat ggtaccagtt CD 151 catatttggt tacccgaagc tcatgtagag gcacccacgg caggatccgt CD 201 tatcttggca ggaattcttt taaaattggg aacttacggg tttttaagat CD 251 tttcaatacc catgtttcct gaagcgacac tttgtttcac tcctttcatt CD 301 tatactctaa gcgcgattgc tataatatat acttccttga ccactttaag CD 351 acagatcgat cttaagaaga tcattgctta ctcctcagta gcccatatga CD 401 attttgtgac tattggtatg tttagtctga acatacaggg aattggaggt CD 451 agcattctac Cgatgttaag tcatggactg gtttcttcag ccctttttct CD 501 atgtgttggt gttctatatg accgacataa gactcgactt gttagatatt CD 551 aCggaggttt agtgagcacc atgccgaatt tctctaccat tttcttcttt CD 601 ttcactttag ccaatatgag tttacctggt actagcagct ttatcgggga CD 651 atttctcatc ttagtaggag ctttccaaag aaatagctta gtagccacat CD 701 tagcagcgct tgggatgatt ttaggcgcgg cctattccct ttggctatat CD 751 aatcgtgtgg tttctggaaa tttaaaaccc gacttcctcc ataaattctc CD 801 cgatcCaaat ggcagagaag ttttcatatt tatacccttt cttgttggag CD 851 gggcgaccgt ccgttaa FT EDITED CDNA CD 1 atgctattag ctattctgtt gattcttctc caaacaggaa ccaccgattt CD 51 acaaatctta ttaaccacag aatttagtga gcggcgccaa atctttttat CD 101 ggattgcttt tttcgcctct ttcgctgtca aagttcctat ggtaccagtt CD 151 catatttggt tacccgaagc tcatgtagag gcacccacgg caggatccgt CD 201 tatcttggca ggaattcttt taaaattggg aacttacggg tttttaagat CD 251 tttcaatacc catgtttcct gaagcgacac tttgtttcac tcctttcatt CD 301 tatactctaa gcgcgattgc tataatatat acttccttga ccactttaag CD 351 acagatcgat cttaagaaga tcattgctta ctcctcagta gcccatatga CD 401 attttgtgac tattggtatg tttagtctga acatacaggg aattggaggt CD 451 agcattctac Tgatgttaag tcatggactg gtttcttcag ccctttttct CD 501 atgtgttggt gttctatatg accgacataa gactcgactt gttagatatt CD 551 aTggaggttt agtgagcacc atgccgaatt tctctaccat tttcttcttt CD 601 ttcactttag ccaatatgag tttacctggt actagcagct ttatcgggga CD 651 atttctcatc ttagtaggag ctttccaaag aaatagctta gtagccacat CD 701 tagcagcgct tgggatgatt ttaggcgcgg cctattccct ttggctatat CD 751 aatcgtgtgg tttctggaaa tttaaaaccc gacttcctcc ataaattctc CD 801 cgatcTaaat ggcagagaag ttttcatatt tatacccttt cttgttggag CD 851 gggcgaccgt ccgttaa SQ SEQUENCE 289 AA; MLLAILLILL QTGTTDLQIL LTTEFSERRQ IFLWIAFFAS FAVKVPMVPV HIWLPEAHVE APTAGSVILA GILLKLGTYG FLRFSIPMFP EATLCFTPFI YTLSAIAIIY TSLTTLRQID LKKIIAYSSV AHMNFVTIGM FSLNIQGIGG SILLMLSHGL VSSALFLCVG VLYDRHKTRL VRYYGGLVST MPNFSTIFFF FTLANMSLPG TSSFIGEFLI LVGAFQRNSL VATLAALGMI LGAAYSLWLY NRVVSGNLKP DFLHKFSDLN GREVFIFIPF LVGGATVR* // ID BA000009_114 STANDARD; PRT; 102 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT pseudo-gene FT GENE : sdh4 FT NOTE : succinate dehydrogenase subunit 4 pseudogene FT LOCUS_TAG : FT PROTEIN_ID : FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 296897 - 297201 FT DIRECTIONS : negative FT EDITING : 36 S(tCa) -> L(tTa) FT EDITING : 47 P(Cca) -> S(Tca) FT EDITING : 65 I(atC) -> I(atT) FT EDITING : 86 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 305 NT; CD 1 atgaaggaac gaatcagtgg attgaagaat gaaagctcga agacaaagag CD 51 aatcgaatcg ggcttttcca aagaattact gcagctttcc cactcccttt CD 101 gattatCata tacaaaaaag tctcttccac tttcctacCc aatctctctg CD 151 tattctggca cataaatgaa ggaatcgaag agattatggc agatCatgtt CD 201 caccaagaaa tgacccgaaa ttggatcttg gtctatttga gattgttttt CD 251 tttaatCgta atcaaagatg ttttcttgtc tctcgtttct tttctgaaca CD 301 aatag FT EDITED CDNA CD 1 atgaaggaac gaatcagtgg attgaagaat gaaagctcga agacaaagag CD 51 aatcgaatcg ggcttttcca aagaattact gcagctttcc cactcccttt CD 101 gattatTata tacaaaaaag tctcttccac tttcctacTc aatctctctg CD 151 tattctggca cataaatgaa ggaatcgaag agattatggc agatTatgtt CD 201 caccaagaaa tgacccgaaa ttggatcttg gtctatttga gattgttttt CD 251 tttaatTgta atcaaagatg ttttcttgtc tctcgtttct tttctgaaca CD 301 aatag SQ SEQUENCE 102 AA; MKERISGLKN ESSKTKRIES GFSKELLQLS HSL*LLYTKK SLPLSYSISL YSGT*MKESK RLWQIMFTKK *PEIGSWSI* DCFF*L*SKM FSCLSFLF*T NX // ID BA000009_115 STANDARD; PRT; 266 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : cox3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99481.2 FT PROTEIN_NAME : cytochrome c oxidase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 297198 - 297995 FT DIRECTIONS : negative FT EDITING : 46 L(Cta) -> L(Tta) FT EDITING : 90 I(atC) -> I(atT) FT EDITING : 105 S(tCt) -> F(tTt) FT EDITING : 130 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 798 NT; CD 1 atgattgaat ctcaaaggca ttcttttcat ttggtagatc caagtccatg CD 51 gcctatttcg ggttcactcg gagctttggc aacgaccgta ggaggtgtga CD 101 tgtacatgca ctcatttcaa gggggtgcaa cacttCtaag tttgggcctt CD 151 atttttatcc tatataccat gtttgtatgg tggcgtgatg ttctacgcga CD 201 atccacgtta gaaggacatc ataccaaagt cgtacaatta ggacttcgat CD 251 atggttttat tttgttcatC gtatcggagg ttatgttctt ttttgctttt CD 301 ttttgggctt tttCtcattc ttctttggca cctgcggtag agatcggagg CD 351 tatttggccc ccaaaaggga tttgggtttt agatcctCgg gaaatccctt CD 401 ttcttaatac ccttattctt ctttcatccg gagctgccgt aacttgggct CD 451 catcatgcta tactcgcggg gaagcaaaaa cgagcagttt acgctttagt CD 501 agctaccgtt ttactggctc tagtcttcac tggctttcaa ggaatggaat CD 551 attatgaagc acccttcact atttcggata gtatttatgg ttctaccttt CD 601 ttcttagcaa caggctttca tggttttcat gtgattatag gtactctttt CD 651 cttgattata tgtggtattc gccaatattt tggtcatctg accaaggaac CD 701 atcacgttgg ctttgaagca gctgcatggt actggcattt tgtagacgtg CD 751 gtttggttat tcttatttgt ctctatctat tggtggggag gtatatga FT EDITED CDNA CD 1 atgattgaat ctcaaaggca ttcttttcat ttggtagatc caagtccatg CD 51 gcctatttcg ggttcactcg gagctttggc aacgaccgta ggaggtgtga CD 101 tgtacatgca ctcatttcaa gggggtgcaa cacttTtaag tttgggcctt CD 151 atttttatcc tatataccat gtttgtatgg tggcgtgatg ttctacgcga CD 201 atccacgtta gaaggacatc ataccaaagt cgtacaatta ggacttcgat CD 251 atggttttat tttgttcatT gtatcggagg ttatgttctt ttttgctttt CD 301 ttttgggctt tttTtcattc ttctttggca cctgcggtag agatcggagg CD 351 tatttggccc ccaaaaggga tttgggtttt agatcctTgg gaaatccctt CD 401 ttcttaatac ccttattctt ctttcatccg gagctgccgt aacttgggct CD 451 catcatgcta tactcgcggg gaagcaaaaa cgagcagttt acgctttagt CD 501 agctaccgtt ttactggctc tagtcttcac tggctttcaa ggaatggaat CD 551 attatgaagc acccttcact atttcggata gtatttatgg ttctaccttt CD 601 ttcttagcaa caggctttca tggttttcat gtgattatag gtactctttt CD 651 cttgattata tgtggtattc gccaatattt tggtcatctg accaaggaac CD 701 atcacgttgg ctttgaagca gctgcatggt actggcattt tgtagacgtg CD 751 gtttggttat tcttatttgt ctctatctat tggtggggag gtatatga SQ SEQUENCE 266 AA; MIESQRHSFH LVDPSPWPIS GSLGALATTV GGVMYMHSFQ GGATLLSLGL IFILYTMFVW WRDVLRESTL EGHHTKVVQL GLRYGFILFI VSEVMFFFAF FWAFFHSSLA PAVEIGGIWP PKGIWVLDPW EIPFLNTLIL LSSGAAVTWA HHAILAGKQK RAVYALVATV LLALVFTGFQ GMEYYEAPFT ISDSIYGSTF FLATGFHGFH VIIGTLFLII CGIRQYFGHL TKEHHVGFEA AAWYWHFVDV VWLFLFVSIY WWGGI* // ID BA000009_117 STANDARD; PRT; 163 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : atp8 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99483.2 FT PROTEIN_NAME : ATPase subunit 8 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 298963 - 299451 FT DIRECTIONS : negative FT EDITING : 10 F(ttC) -> F(ttT) FT EDITING : 16 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 489 NT; CD 1 atgcctcaac tggatcaatt tacttatttC acacaattct tctggtCatg CD 51 ccttttcttc ttgactttct atattctaat atgcaatgat agagatggag CD 101 tacttgggat cagcagaatt ctaaaactac gaaatcaact gctttcacac CD 151 cgggggaaca acatccaaag caaggaccca aacagtttgc aagatatctt CD 201 gagaaagggt tttaacacag gtgtatccta tatgtactct agtttattcg CD 251 aagtatccca atggtgtaag gccgtcgact tatttggaaa aaggaagaaa CD 301 atcactttga tctcttgttt cggagaaata agtggctcac gaggaatgga CD 351 aagaaacata ttctatttga tctcgaagtc ttcatatagc acttcttcca CD 401 atcctggatg ggtgatcact tgtaagaatg acataatgct aatccatgtt CD 451 ctacacggcc aagaaagtgg gaaaatagaa agatgttaa FT EDITED CDNA CD 1 atgcctcaac tggatcaatt tacttatttT acacaattct tctggtTatg CD 51 ccttttcttc ttgactttct atattctaat atgcaatgat agagatggag CD 101 tacttgggat cagcagaatt ctaaaactac gaaatcaact gctttcacac CD 151 cgggggaaca acatccaaag caaggaccca aacagtttgc aagatatctt CD 201 gagaaagggt tttaacacag gtgtatccta tatgtactct agtttattcg CD 251 aagtatccca atggtgtaag gccgtcgact tatttggaaa aaggaagaaa CD 301 atcactttga tctcttgttt cggagaaata agtggctcac gaggaatgga CD 351 aagaaacata ttctatttga tctcgaagtc ttcatatagc acttcttcca CD 401 atcctggatg ggtgatcact tgtaagaatg acataatgct aatccatgtt CD 451 ctacacggcc aagaaagtgg gaaaatagaa agatgttaa SQ SEQUENCE 163 AA; MPQLDQFTYF TQFFWLCLFF LTFYILICND RDGVLGISRI LKLRNQLLSH RGNNIQSKDP NSLQDILRKG FNTGVSYMYS SLFEVSQWCK AVDLFGKRKK ITLISCFGEI SGSRGMERNI FYLISKSSYS TSSNPGWVIT CKNDIMLIHV LHGQESGKIE RC* // ID BA000009_132 STANDARD; PRT; 507 AA. AC BA000009; DT Tue Jul 21 07:04:06 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Nucleic Acids Res. 28 (13), 2571-2576 (2000) RL PUBMED 10871408 FT Full length CDS FT GENE : atp1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA99499.2 FT PROTEIN_NAME : ATPase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 337591 - 339111 FT DIRECTIONS : negative FT EDITING : 393 P(cCa) -> L(cTa) FT EDITING : 431 P(cCg) -> L(cTg) FT EDITING : 472 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1521 NT; CD 1 atggaattct ctcccagagc tgcggaacta acgaatctat tagaaagtag CD 51 aattaccaac ttttacacga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacgtgttt atggattgaa cgagattcaa CD 151 gctggggaaa tggtggaatt tgccagcggt gtgaaaggaa tagccttaaa CD 201 tcttgagaat gagaatgtag ggattgttgt ctttggtagt gataccgcta CD 251 ttaaagaggg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gcgggaaagg ctatgctagg gcgtgtggtc gacgcgttgg gagtacctat CD 351 tgatggaaga ggggctctaa gcgatcacga gcgtcgacgt gtcgaagtga CD 401 aagcccccgg gattattgaa cgtaaatctg tgcacgagcc tatgcaaacc CD 451 gggttaaagg cggtagatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttataatc ggggaccgac aaacgggaaa aacagctatt gctatcgata CD 551 ccatattaaa ccaaaagcaa ctgaactcaa aggccacctc tgagagtgag CD 601 acattgtatt gtgtctatgt agcggttgga cagaaacgtt caactgtggc CD 651 acaattagtt caaattcttt cagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctcttcaatt tctggcccca CD 751 tattctgggt gtgctatggg agaatatttc cgcgataatg gaatgcacgc CD 801 attaataatc tatgatgatc ttagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggcgac CD 901 gttttctatt tacattcccg tctcttagaa agagccgcta aacgatcgga CD 951 ccagacaggc gcaggtagct tgaccgccct acccgtcatt gaaacacaag CD 1001 ctggagacgt atcggcctat attcccacca atgtgatctc cattactgat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtc ggcttatctg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtctgc ggtagtcCaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgcctttgc tcaatttggg tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct tacagaagta cCgaaacaac CD 1301 cacaatatgc accacttcca attgaaaaac aaattctagt catttacgca CD 1351 gctgtcaatg gattctgtga tcgaatgcca ctagataaaa tttctcaata CD 1401 tgagcgaacc attcCaaata gtgtaaaacc agaattatta caatccctta CD 1451 agggggggtt aactaacgaa aaaaagatgg aactagattc cttcttaaaa CD 1501 gaatgcgctt tgaattacta a FT EDITED CDNA CD 1 atggaattct ctcccagagc tgcggaacta acgaatctat tagaaagtag CD 51 aattaccaac ttttacacga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacgtgttt atggattgaa cgagattcaa CD 151 gctggggaaa tggtggaatt tgccagcggt gtgaaaggaa tagccttaaa CD 201 tcttgagaat gagaatgtag ggattgttgt ctttggtagt gataccgcta CD 251 ttaaagaggg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gcgggaaagg ctatgctagg gcgtgtggtc gacgcgttgg gagtacctat CD 351 tgatggaaga ggggctctaa gcgatcacga gcgtcgacgt gtcgaagtga CD 401 aagcccccgg gattattgaa cgtaaatctg tgcacgagcc tatgcaaacc CD 451 gggttaaagg cggtagatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttataatc ggggaccgac aaacgggaaa aacagctatt gctatcgata CD 551 ccatattaaa ccaaaagcaa ctgaactcaa aggccacctc tgagagtgag CD 601 acattgtatt gtgtctatgt agcggttgga cagaaacgtt caactgtggc CD 651 acaattagtt caaattcttt cagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctcttcaatt tctggcccca CD 751 tattctgggt gtgctatggg agaatatttc cgcgataatg gaatgcacgc CD 801 attaataatc tatgatgatc ttagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggcgac CD 901 gttttctatt tacattcccg tctcttagaa agagccgcta aacgatcgga CD 951 ccagacaggc gcaggtagct tgaccgccct acccgtcatt gaaacacaag CD 1001 ctggagacgt atcggcctat attcccacca atgtgatctc cattactgat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtc ggcttatctg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtctgc ggtagtcTaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgcctttgc tcaatttggg tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct tacagaagta cTgaaacaac CD 1301 cacaatatgc accacttcca attgaaaaac aaattctagt catttacgca CD 1351 gctgtcaatg gattctgtga tcgaatgcca ctagataaaa tttctcaata CD 1401 tgagcgaacc attcTaaata gtgtaaaacc agaattatta caatccctta CD 1451 agggggggtt aactaacgaa aaaaagatgg aactagattc cttcttaaaa CD 1501 gaatgcgctt tgaattacta a SQ SEQUENCE 507 AA; MEFSPRAAEL TNLLESRITN FYTNFQVDEI GRVVSVGDGI ARVYGLNEIQ AGEMVEFASG VKGIALNLEN ENVGIVVFGS DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DALGVPIDGR GALSDHERRR VEVKAPGIIE RKSVHEPMQT GLKAVDSLVP IGRGQRELII GDRQTGKTAI AIDTILNQKQ LNSKATSESE TLYCVYVAVG QKRSTVAQLV QILSEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSLKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV LKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDKISQYERT ILNSVKPELL QSLKGGLTNE KKMELDSFLK ECALNY* // ID BA000024_19 STANDARD; PRT; 326 AA. AC BA000024; DT Tue Jul 21 07:04:07 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Mol. Genet. Genomics 272 (3), 247-256 (2004) RL PUBMED 15340837 FT Full length CDS FT GENE : FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAD66721.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 129/2 FT INTRON 157/0 FT INTRON 221/0 FT INTRON 240/2 FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 978 NT; CD 1 aCgtacatag ctgttccagc tgaaatactt ggaataattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttcgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctcccttt ttagaatggc tccagtcact acatttatgc CD 251 taagtctggt tgctcgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatccga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga attattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtccctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc ctcgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtccggt attcccttgt CD 551 tccctgtatt ggttatgttc tttatttctt gtttagcaga aactaatcga CD 601 gctccgtttg atctcccaga agcggaagct gaattagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtctgctct ttttttttta ggagagtatg CD 701 ccaatatgat cttaatgagt ggtctatgca catcgctttc tccaggaggt CD 751 tggccgccta tcctagatct tcccatttcc aagaggatcc cgggctcgat CD 801 ctggtttagt atcaaggtga ttctctttct ctttctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtcgccg tttctggtgt CD 951 tttagtcacc tttcaatggc tcccttaa FT EDITED CDNA CD 1 aTgtacatag ctgttccagc tgaaatactt ggaataattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttcgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctcccttt ttagaatggc tccagtcact acatttatgc CD 251 taagtctggt tgctcgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatccga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga attattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtccctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc ctcgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtccggt attcccttgt CD 551 tccctgtatt ggttatgttc tttatttctt gtttagcaga aactaatcga CD 601 gctccgtttg atctcccaga agcggaagct gaattagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtctgctct ttttttttta ggagagtatg CD 701 ccaatatgat cttaatgagt ggtctatgca catcgctttc tccaggaggt CD 751 tggccgccta tcctagatct tcccatttcc aagaggatcc cgggctcgat CD 801 ctggtttagt atcaaggtga ttctctttct ctttctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtcgccg tttctggtgt CD 951 tttagtcacc tttcaatggc tcccttaa SQ SEQUENCE 326 AA; MYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FSLFRMAPVT TFMLSLVARA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGWSSNS KYAFLGALRS AAQMVPYEVS IGLILITVLI CVGPRNSSEI VMAQKQIWSG IPLFPVLVMF FISCLAETNR APFDLPEAEA ELVAGYNVEY SSMGSALFFL GEYANMILMS GLCTSLSPGG WPPILDLPIS KRIPGSIWFS IKVILFLFLY IWVRAAFPRY RYDQLMGLGR KVFLPLSLAR VVAVSGVLVT FQWLP* // ID BA000024_47 STANDARD; PRT; 101 AA. AC BA000024; DT Tue Jul 21 07:04:07 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Mol. Genet. Genomics 272 (3), 247-256 (2004) RL PUBMED 15340837 FT Full length CDS FT GENE : nad4L FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAD66750.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 177968 - 178270 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggattcta tcaaatattt tacattttct atgatcatct ttatttcagg CD 51 tattcggggt attctcctta atagacgaaa tattcttatt atgtcaatgt CD 101 caattgaatc aatgttatta gctgtgaatt cgaacttttt ggtattttct CD 151 gtttcttcgg atgatatgat gggtcaatca tttgctttat tggttccaac CD 201 ggtggcagct gcggaatctg ctattgggtt agccattttc gttattactt CD 251 tccgagtccg gggtactatt gctgtagaat ctattaatag cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggattcta tcaaatattt tacattttct atgatcatct ttatttcagg CD 51 tattcggggt attctcctta atagacgaaa tattcttatt atgtcaatgt CD 101 caattgaatc aatgttatta gctgtgaatt cgaacttttt ggtattttct CD 151 gtttcttcgg atgatatgat gggtcaatca tttgctttat tggttccaac CD 201 ggtggcagct gcggaatctg ctattgggtt agccattttc gttattactt CD 251 tccgagtccg gggtactatt gctgtagaat ctattaatag cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDSIKYFTFS MIIFISGIRG ILLNRRNILI MSMSIESMLL AVNSNFLVFS VSSDDMMGQS FALLVPTVAA AESAIGLAIF VITFRVRGTI AVESINSIQG * // ID BA000024_50 STANDARD; PRT; 75 AA. AC BA000024; DT Tue Jul 21 07:04:07 2009 DE Beta vulgaris subsp. vulgaris mitochondrial DNA, complete genome. OS mitochondrion Beta vulgaris subsp. vulgaris OC Beta vulgaris subsp. vulgaris RN [1] RL Mol. Genet. Genomics 272 (3), 247-256 (2004) RL PUBMED 15340837 FT Full length CDS FT GENE : atp9 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAD66753.1 FT PROTEIN_NAME : ATPase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 195042 - 195266 FT DIRECTIONS : negative FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gcgcaaaatc aataggtgcc ggagccgcta caattgcttc CD 51 agcgggagct gctatcggta ttggaaacgt ttttagttcc ttgatccatt CD 101 ccgtggcgcg aaatccgtca ttggcgaaac aattatttgg ttatgctatt CD 151 ttgggctttg ctctaaccga agctatcgca ttgtttgccc taatgatggc CD 201 ctttttgatt tcattcgtat tcCga FT EDITED CDNA CD 1 atgttagaag gcgcaaaatc aataggtgcc ggagccgcta caattgcttc CD 51 agcgggagct gctatcggta ttggaaacgt ttttagttcc ttgatccatt CD 101 ccgtggcgcg aaatccgtca ttggcgaaac aattatttgg ttatgctatt CD 151 ttgggctttg ctctaaccga agctatcgca ttgtttgccc taatgatggc CD 201 ctttttgatt tcattcgtat tcTga SQ SEQUENCE 75 AA; MLEGAKSIGA GAATIASAGA AIGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI SFVF* // ID BA000029_1 STANDARD; PRT; 326 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19852.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 129/2 FT INTRON 157/0 FT INTRON 221/0 FT INTRON 240/2 FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 72 S(tCc) -> F(tTc) FT EDITING : 103 P(CCg) -> L(TTg) FT CODON_START : 1 CL CDNALEN 978 NT; CD 1 aCgtacatag ctgttccagc ggaaatactt tgtttaattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggtttgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctCccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgcttgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatCCga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga ataattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtccctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc cctgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtccggt attcccttgt CD 551 tccccgtatt ggttatgttc tttattcctt gtctagcaga aactaatcga CD 601 gctccgtctg atctcccaga agcggaagct gaatcagttg ctggctataa CD 651 tgtggaatat tcttcaatgg ggtctgctct tttttttttg ggagagtatg CD 701 ccaatatgat cttaatgagc ggtctatgca catcgctctt tccaggaggt CD 751 tggccgccta tcctagatct tcccatttcc aagaagatcc cttgttcgat CD 801 ctggtttagt atcaaggttc ttctttttct gtttctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtccccg tttcaggtgt CD 951 ttcagtcacc tttcgatggc tcccttaa FT EDITED CDNA CD 1 aTgtacatag ctgttccagc ggaaatactt tgtttaattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggtttgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctTccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgcttgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatTTga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga ataattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtccctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc cctgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtccggt attcccttgt CD 551 tccccgtatt ggttatgttc tttattcctt gtctagcaga aactaatcga CD 601 gctccgtctg atctcccaga agcggaagct gaatcagttg ctggctataa CD 651 tgtggaatat tcttcaatgg ggtctgctct tttttttttg ggagagtatg CD 701 ccaatatgat cttaatgagc ggtctatgca catcgctctt tccaggaggt CD 751 tggccgccta tcctagatct tcccatttcc aagaagatcc cttgttcgat CD 801 ctggtttagt atcaaggttc ttctttttct gtttctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtccccg tttcaggtgt CD 951 ttcagtcacc tttcgatggc tcccttaa SQ SEQUENCE 326 AA; MYIAVPAEIL CLILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGLKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVAWA VVPFDYGMVL SDLNIGLLYL FAISSLGVYG IIIAGWSSNS KYAFLGALRS AAQMVPYEVS IGLILITVLI CVGPCNSSEI VMAQKQIWSG IPLFPVLVMF FIPCLAETNR APSDLPEAEA ESVAGYNVEY SSMGSALFFL GEYANMILMS GLCTSLFPGG WPPILDLPIS KKIPCSIWFS IKVLLFLFLY IWVRAAFPRY RYDQLMGLGR KVFLPLSLAR VVPVSGVSVT FRWLP* // ID BA000029_2 STANDARD; PRT; 281 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : cox3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19853.2 FT PROTEIN_NAME : Cytochrome c oxidase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 17226 - 18068 FT DIRECTIONS : negative FT EDITING : 267 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 843 NT; CD 1 atgggggtga aggggggttt acatacaacc ggggcaaagt ggtttatgat CD 51 tgaatctcag aggcattctt atcatttggt agatccaagt ccatggccta CD 101 tttcgggttc actcggagct ttggcaacca ccgtaggagg tgtgatgtac CD 151 atgcactcat ttcaaggggg tgcaacactt ctcagtttgg gcctaatatt CD 201 tctcctttat accatgttcg tatggtggcg ggatgttcta cgtgaatcca CD 251 cgttggaagg gcatcataca aaagctgtac aattaggacc tcgatatggt CD 301 tctattctct tcatagtctc ggaggttatg ttcctttttg cttttttttg CD 351 ggcttcttct cattcttctt tggcacctac ggtagagatc ggaggtattt CD 401 ggcccccaaa agggattggg gttttagatc cttgggaaat ccctcttctt CD 451 aataccccta ttctcccttc atccggagct gccgtaactt gggctcatca CD 501 tgctatactc gcggggaagg aaaaacgagc agtttacgct ttagtagcaa CD 551 ccgtttcact ggctctagta tccactggct ttcaaggaat ggaatattac CD 601 caagcaccct ccactatttc ggatagtatt tacggttcta cctttttctt CD 651 agcaactggc tttcatggtt ttcatgtgat tataggtact cttttcttga CD 701 tcgtatgtgg tattcgccaa tatcttggtc atctgaccaa gaagcatcac CD 751 gttggctttg aagcagctgc atggtactgg cattttgtag acgtggttCg CD 801 gttattccca tttgtctcta tctattggtg gggaggtata tga FT EDITED CDNA CD 1 atgggggtga aggggggttt acatacaacc ggggcaaagt ggtttatgat CD 51 tgaatctcag aggcattctt atcatttggt agatccaagt ccatggccta CD 101 tttcgggttc actcggagct ttggcaacca ccgtaggagg tgtgatgtac CD 151 atgcactcat ttcaaggggg tgcaacactt ctcagtttgg gcctaatatt CD 201 tctcctttat accatgttcg tatggtggcg ggatgttcta cgtgaatcca CD 251 cgttggaagg gcatcataca aaagctgtac aattaggacc tcgatatggt CD 301 tctattctct tcatagtctc ggaggttatg ttcctttttg cttttttttg CD 351 ggcttcttct cattcttctt tggcacctac ggtagagatc ggaggtattt CD 401 ggcccccaaa agggattggg gttttagatc cttgggaaat ccctcttctt CD 451 aataccccta ttctcccttc atccggagct gccgtaactt gggctcatca CD 501 tgctatactc gcggggaagg aaaaacgagc agtttacgct ttagtagcaa CD 551 ccgtttcact ggctctagta tccactggct ttcaaggaat ggaatattac CD 601 caagcaccct ccactatttc ggatagtatt tacggttcta cctttttctt CD 651 agcaactggc tttcatggtt ttcatgtgat tataggtact cttttcttga CD 701 tcgtatgtgg tattcgccaa tatcttggtc atctgaccaa gaagcatcac CD 751 gttggctttg aagcagctgc atggtactgg cattttgtag acgtggttTg CD 801 gttattccca tttgtctcta tctattggtg gggaggtata tga SQ SEQUENCE 281 AA; MGVKGGLHTT GAKWFMIESQ RHSYHLVDPS PWPISGSLGA LATTVGGVMY MHSFQGGATL LSLGLIFLLY TMFVWWRDVL RESTLEGHHT KAVQLGPRYG SILFIVSEVM FLFAFFWASS HSSLAPTVEI GGIWPPKGIG VLDPWEIPLL NTPILPSSGA AVTWAHHAIL AGKEKRAVYA LVATVSLALV STGFQGMEYY QAPSTISDSI YGSTFFLATG FHGFHVIIGT LFLIVCGIRQ YLGHLTKKHH VGFEAAAWYW HFVDVVWLFP FVSIYWWGGI * // ID BA000029_3 STANDARD; PRT; 198 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : orf25 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19854.2 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 18402 - 18995 FT DIRECTIONS : negative FT EDITING : 20 P(cCa) -> L(cTa) FT EDITING : 21 S(tCt) -> F(tTt) FT EDITING : 25 S(tCa) -> L(tTa) FT EDITING : 27 P(Ccg) -> S(Tcg) FT EDITING : 31 S(tCa) -> L(tTa) FT EDITING : 41 R(Cgt) -> C(Tgt) FT EDITING : 84 P(cCg) -> L(cTg) FT EDITING : 133 S(tCa) -> L(tTa) FT EDITING : 140 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 594 NT; CD 1 atgggattga gttcaacgga taagaaggat agaagaaata tgctatttgc CD 51 tgctattcCa tCtatttgtg catCaagtCc gaagaagatc tCaatctata CD 101 atgaagaaat gatagtagct Cgttgtttta taggctttct catattcagt CD 151 cggaagagtt taggtaagac tttcaaagaa actctcgacg ggagaatcga CD 201 gtctattcag gaagaattgc agcaattctt caatcctaac gaagtaattc CD 251 Cgggggaatc caatgaacaa caacgattac ttaggatcag cttgcgaatt CD 301 tgcagcgccg tagtagaatc attaccaacg gcacgctgtg cgcctaagtg CD 351 cgaaaagaca gtgcaagctt tgttatgccg aaacctaaat gtaaagtCag CD 401 caacacttct aaatgccaCt tcttcccgtc gcatccgtct tcaggacgat CD 451 atagttacag gttttcactt ttcagtgagt gaaagatttg tatccgggtc CD 501 tacgttcaaa gcttctactg tagaacaaat tcgagaggcc ttcgtaccca CD 551 tagacctaat tcgggaaggc ttgatagtcc taagaaaggt gtag FT EDITED CDNA CD 1 atgggattga gttcaacgga taagaaggat agaagaaata tgctatttgc CD 51 tgctattcTa tTtatttgtg catTaagtTc gaagaagatc tTaatctata CD 101 atgaagaaat gatagtagct Tgttgtttta taggctttct catattcagt CD 151 cggaagagtt taggtaagac tttcaaagaa actctcgacg ggagaatcga CD 201 gtctattcag gaagaattgc agcaattctt caatcctaac gaagtaattc CD 251 Tgggggaatc caatgaacaa caacgattac ttaggatcag cttgcgaatt CD 301 tgcagcgccg tagtagaatc attaccaacg gcacgctgtg cgcctaagtg CD 351 cgaaaagaca gtgcaagctt tgttatgccg aaacctaaat gtaaagtTag CD 401 caacacttct aaatgccaTt tcttcccgtc gcatccgtct tcaggacgat CD 451 atagttacag gttttcactt ttcagtgagt gaaagatttg tatccgggtc CD 501 tacgttcaaa gcttctactg tagaacaaat tcgagaggcc ttcgtaccca CD 551 tagacctaat tcgggaaggc ttgatagtcc taagaaaggt gtag SQ SEQUENCE 198 AA; MGLSSTDKKD RRNMLFAAIL FICALSSKKI LIYNEEMIVA CCFIGFLIFS RKSLGKTFKE TLDGRIESIQ EELQQFFNPN EVILGESNEQ QRLLRISLRI CSAVVESLPT ARCAPKCEKT VQALLCRNLN VKLATLLNAI SSRRIRLQDD IVTGFHFSVS ERFVSGSTFK ASTVEQIREA FVPIDLIREG LIVLRKV* // ID BA000029_6 STANDARD; PRT; 149 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : rps7 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19857.2 FT PROTEIN_NAME : Ribosomal protein S7 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 46565 - 47011 FT DIRECTIONS : negative FT EDITING : 93 L(Ctt) -> F(Ttt) FT EDITING : 111 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 447 NT; CD 1 atgggggact ttgatggtga gcaaaaagaa ttgatcaaga aattggtaaa CD 51 ctttcgcatg atcgatggta aaagaacgag agttcgtgct attgtttata CD 101 aaacttttca ccgcctagct cgaactgaac gcgatgtaat caaacttatg CD 151 gttgacgccg tagataatat aaagccaata tgcgaagtgg tcaaagtagg CD 201 agtcgcaggt actatttatg atgttcctgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggatcCttg gagcagcttt caaacgacgt CD 301 ataagctaca ggataagctt agagaaatgt tCatttgctg agatactgga CD 351 tgcttaccga aagaggggaa tttcacgtaa gagaaggggg aatcttcatg CD 401 gactggcttc caccaatcgg agtttcgcgc atttcagatg gtggtaa FT EDITED CDNA CD 1 atgggggact ttgatggtga gcaaaaagaa ttgatcaaga aattggtaaa CD 51 ctttcgcatg atcgatggta aaagaacgag agttcgtgct attgtttata CD 101 aaacttttca ccgcctagct cgaactgaac gcgatgtaat caaacttatg CD 151 gttgacgccg tagataatat aaagccaata tgcgaagtgg tcaaagtagg CD 201 agtcgcaggt actatttatg atgttcctgg gattgtagcc agggatcgtc CD 251 aacaaacctt agctattcgt tggatcTttg gagcagcttt caaacgacgt CD 301 ataagctaca ggataagctt agagaaatgt tTatttgctg agatactgga CD 351 tgcttaccga aagaggggaa tttcacgtaa gagaaggggg aatcttcatg CD 401 gactggcttc caccaatcgg agtttcgcgc atttcagatg gtggtaa SQ SEQUENCE 149 AA; MGDFDGEQKE LIKKLVNFRM IDGKRTRVRA IVYKTFHRLA RTERDVIKLM VDAVDNIKPI CEVVKVGVAG TIYDVPGIVA RDRQQTLAIR WIFGAAFKRR ISYRISLEKC LFAEILDAYR KRGISRKRRG NLHGLASTNR SFAHFRWW* // ID BA000029_9 STANDARD; PRT; 156 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : orfB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19860.2 FT PROTEIN_NAME : ORFB protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 53424 - 53891 FT DIRECTIONS : positive FT EDITING : 20 L(Ctc) -> F(Ttc) FT EDITING : 41 L(ctC) -> L(ctT) FT EDITING : 67 S(tCg) -> L(tTg) FT EDITING : 148 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 468 NT; CD 1 atgcctcaac ttgataaatt gacttatttc tcacaattct tctggttatg CD 51 ccttttcCtc tttagttttt atattctctt attaaataat aataatggaa CD 101 tacttggaat tagcagaatt ctCaaactac ggaaccaact gctttcgcac CD 151 cgggggaaca agatccgttt caaggaccct aagaatttgg aagatatctC CD 201 gagaaaaggt tttagcaccg gtctctcata tatgtactcc agtttatccg CD 251 aagtatccca atggtgtaag accgtcgact atttgggaaa aaggaggaaa CD 301 atcactctga tctcagattt cggagaaata agtggctcac gaggaatgga CD 351 gagacagatt ctctatttga tctcgaagtc ctcatataac acttcttcca CD 401 gtcggatcac ttgttggaaa aaaataatgc tcacacatgt tcCacacggg CD 451 caaggaagca taatctaa FT EDITED CDNA CD 1 atgcctcaac ttgataaatt gacttatttc tcacaattct tctggttatg CD 51 ccttttcTtc tttagttttt atattctctt attaaataat aataatggaa CD 101 tacttggaat tagcagaatt ctTaaactac ggaaccaact gctttcgcac CD 151 cgggggaaca agatccgttt caaggaccct aagaatttgg aagatatctT CD 201 gagaaaaggt tttagcaccg gtctctcata tatgtactcc agtttatccg CD 251 aagtatccca atggtgtaag accgtcgact atttgggaaa aaggaggaaa CD 301 atcactctga tctcagattt cggagaaata agtggctcac gaggaatgga CD 351 gagacagatt ctctatttga tctcgaagtc ctcatataac acttcttcca CD 401 gtcggatcac ttgttggaaa aaaataatgc tcacacatgt tcTacacggg CD 451 caaggaagca taatctaa SQ SEQUENCE 156 AA; MPQLDKLTYF SQFFWLCLFF FSFYILLLNN NNGILGISRI LKLRNQLLSH RGNKIRFKDP KNLEDILRKG FSTGLSYMYS SLSEVSQWCK TVDYLGKRRK ITLISDFGEI SGSRGMERQI LYLISKSSYN TSSSRITCWK KIMLTHVLHG QGSII* // ID BA000029_11 STANDARD; PRT; 206 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : nad6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19862.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 59519 - 60136 FT DIRECTIONS : negative FT EDITING : 9 P(CCt) -> F(TTt) FT EDITING : 30 P(CCc) -> F(TTc) FT EDITING : 49 S(tCc) -> F(tTc) FT EDITING : 53 S(tCC) -> F(tTT) FT EDITING : 54 P(cCa) -> L(cTa) FT EDITING : 57 H(Cat) -> Y(Tat) FT EDITING : 64 S(tCa) -> L(tTa) FT EDITING : 149 S(tCc) -> F(tTc) FT EDITING : 158 I(atC) -> I(atT) FT EDITING : 159 S(tCa) -> L(tTa) FT EDITING : 188 L(Ctg) -> L(Ttg) FT EDITING : 189 D(gaC) -> D(gaT) FT EDITING : 190 S(tCt) -> F(tTt) FT EDITING : 202 I(atC) -> I(atT) FT EDITING : 204 I(atC) -> I(atT) FT CODON_START : 1 CL CDNALEN 618 NT; CD 1 atgatacttt cagttttgtc tagcCCtgct ttggtctctg gtttgatggt CD 51 tgtacgtgct aaaaatccgg tacattccgt tttgtttCCc atcctaatct CD 101 tttgcgacac agctggttta cttattttgt taggtctcga cttctCcgct CD 151 atgatctCCc CagtaattCa tataggagct attgccgttt Cattcctatt CD 201 cgtggttatg atgttcaata ttcaaatagc ggagattcac gaagaagtat CD 251 tgcgctattt accagtgagt ggtattattg gactgatctt ttggtgggaa CD 301 atgttcttca ttttagataa tgaaaccatt ccattactac caacccacag CD 351 aaatacgacc tctctgagat atacggttta tgccggaaag gtacgaaatt CD 401 ggactaattt ggacacattg ggcaatttac tttataccta ctattCcgtc CD 451 tggtttttgg tttctactct gatCtCatta gtagctatga ttggagctat CD 501 agtactgact atgcatagga ctacaaaggt tcaaagacag gatgtattcc CD 551 gacgaaatgc cCtggaCtCt aggaggacta taatgaggag gacgacagac CD 601 caaatCtcga tCtactaa FT EDITED CDNA CD 1 atgatacttt cagttttgtc tagcTTtgct ttggtctctg gtttgatggt CD 51 tgtacgtgct aaaaatccgg tacattccgt tttgtttTTc atcctaatct CD 101 tttgcgacac agctggttta cttattttgt taggtctcga cttctTcgct CD 151 atgatctTTc TagtaattTa tataggagct attgccgttt Tattcctatt CD 201 cgtggttatg atgttcaata ttcaaatagc ggagattcac gaagaagtat CD 251 tgcgctattt accagtgagt ggtattattg gactgatctt ttggtgggaa CD 301 atgttcttca ttttagataa tgaaaccatt ccattactac caacccacag CD 351 aaatacgacc tctctgagat atacggttta tgccggaaag gtacgaaatt CD 401 ggactaattt ggacacattg ggcaatttac tttataccta ctattTcgtc CD 451 tggtttttgg tttctactct gatTtTatta gtagctatga ttggagctat CD 501 agtactgact atgcatagga ctacaaaggt tcaaagacag gatgtattcc CD 551 gacgaaatgc cTtggaTtTt aggaggacta taatgaggag gacgacagac CD 601 caaatTtcga tTtactaa SQ SEQUENCE 206 AA; MILSVLSSFA LVSGLMVVRA KNPVHSVLFF ILIFCDTAGL LILLGLDFFA MIFLVIYIGA IAVLFLFVVM MFNIQIAEIH EEVLRYLPVS GIIGLIFWWE MFFILDNETI PLLPTHRNTT SLRYTVYAGK VRNWTNLDTL GNLLYTYYFV WFLVSTLILL VAMIGAIVLT MHRTTKVQRQ DVFRRNALDF RRTIMRRTTD QISIY* // ID BA000029_12 STANDARD; PRT; 241 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : ccmC FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19863.2 FT PROTEIN_NAME : Cytochrome c biogenesis C FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 60410 - 61132 FT DIRECTIONS : negative FT EDITING : 26 R(Cgg) -> W(Tgg) FT EDITING : 35 H(Cat) -> Y(Tat) FT EDITING : 39 R(Cgg) -> W(Tgg) FT EDITING : 54 S(tCg) -> L(tTg) FT EDITING : 60 A(gCg) -> V(gTg) FT EDITING : 62 R(Cgg) -> W(Tgg) FT EDITING : 76 S(tCc) -> F(tTc) FT EDITING : 79 P(cCa) -> L(cTa) FT EDITING : 100 S(tCt) -> F(tTt) FT EDITING : 111 R(Cgg) -> W(Tgg) FT EDITING : 120 R(Cgg) -> W(Tgg) FT EDITING : 134 L(Ctt) -> F(Ttt) FT EDITING : 140 L(Ctg) -> L(Ttg) FT EDITING : 141 R(Cgt) -> C(Tgt) FT EDITING : 146 P(Cct) -> S(Tct) FT EDITING : 149 P(cCg) -> L(cTg) FT EDITING : 151 P(Cct) -> S(Tct) FT EDITING : 153 S(tCa) -> L(tTa) FT EDITING : 155 R(Cgt) -> C(Tgt) FT EDITING : 156 A(gCt) -> V(gTt) FT EDITING : 158 P(cCg) -> L(cTg) FT EDITING : 166 S(tCt) -> F(tTt) FT EDITING : 167 P(Cca) -> S(Tca) FT EDITING : 174 S(tCg) -> L(tTg) FT EDITING : 183 S(tCt) -> F(tTt) FT EDITING : 190 P(Cct) -> S(Tct) FT EDITING : 192 P(cCc) -> L(cTc) FT EDITING : 203 P(cCc) -> L(cTc) FT EDITING : 205 S(tCt) -> F(tTt) FT EDITING : 207 R(Cgt) -> C(Tgt) FT EDITING : 208 I(atC) -> I(atT) FT EDITING : 217 P(cCt) -> L(cTt) FT EDITING : 219 P(cCa) -> L(cTa) FT EDITING : 222 P(cCc) -> L(cTc) FT EDITING : 225 P(Ccc) -> S(Tcc) FT CODON_START : 1 CL CDNALEN 723 NT; CD 1 atgtcagttt cgttattaca accttatttt tttatgtcaa agacaaaaag CD 51 ctacgcgcaa attctcattg gatctCggtt gttcttaaca gcgatggcta CD 101 ttCatttaag tcttCgggta gcaccaccag atcttcaaca aggtggaaat CD 151 tctcgtattt Cgtatgtaca tgttcctgCg gctCggatga gtatagttat CD 201 ttatatcgcg acagctataa acagttCctt gttccCatta acaaaacatc CD 251 ccctttttct tcgctcttcc ggaaccggta cagaaattgg tgctttttCt CD 301 actttgttta cgttagtgac tgggggattt Cggggaaggc ctatgtgggg CD 351 tacctttCgg gtgtgggatg ctcgtttaac ttctgtattc atcttgtttC CD 401 ttatttacct gggtgcaCtg Cgttttcaaa agcttCctgt cgaacCggct CD 451 CctatttCaa tcCgtgCtgg acCgatcgat ataccaataa taaagtCtCc CD 501 agtcaactgg tggaatacat Cgcatcaacc tgggagtatt agccgatCtg CD 551 gtacatcaat acatgttCct atgcCcattc caatcttgtc taactttgct CD 601 aacttccCct tctCtaccCg tatCttgttc gttctggaaa cacgtcttcC CD 651 tattcCatct tttcCcgaat ctCccttaac ggaagaaata gaagctcgag CD 701 aaggaatacc actaaaaacc tag FT EDITED CDNA CD 1 atgtcagttt cgttattaca accttatttt tttatgtcaa agacaaaaag CD 51 ctacgcgcaa attctcattg gatctTggtt gttcttaaca gcgatggcta CD 101 ttTatttaag tcttTgggta gcaccaccag atcttcaaca aggtggaaat CD 151 tctcgtattt Tgtatgtaca tgttcctgTg gctTggatga gtatagttat CD 201 ttatatcgcg acagctataa acagttTctt gttccTatta acaaaacatc CD 251 ccctttttct tcgctcttcc ggaaccggta cagaaattgg tgctttttTt CD 301 actttgttta cgttagtgac tgggggattt Tggggaaggc ctatgtgggg CD 351 tacctttTgg gtgtgggatg ctcgtttaac ttctgtattc atcttgtttT CD 401 ttatttacct gggtgcaTtg Tgttttcaaa agcttTctgt cgaacTggct CD 451 TctatttTaa tcTgtgTtgg acTgatcgat ataccaataa taaagtTtTc CD 501 agtcaactgg tggaatacat Tgcatcaacc tgggagtatt agccgatTtg CD 551 gtacatcaat acatgttTct atgcTcattc caatcttgtc taactttgct CD 601 aacttccTct tctTtaccTg tatTttgttc gttctggaaa cacgtcttcT CD 651 tattcTatct tttcTcgaat ctTccttaac ggaagaaata gaagctcgag CD 701 aaggaatacc actaaaaacc tag SQ SEQUENCE 241 AA; MSVSLLQPYF FMSKTKSYAQ ILIGSWLFLT AMAIYLSLWV APPDLQQGGN SRILYVHVPV AWMSIVIYIA TAINSFLFLL TKHPLFLRSS GTGTEIGAFF TLFTLVTGGF WGRPMWGTFW VWDARLTSVF ILFFIYLGAL CFQKLSVELA SILICVGLID IPIIKFSVNW WNTLHQPGSI SRFGTSIHVS MLIPILSNFA NFLFFTCILF VLETRLLILS FLESSLTEEI EAREGIPLKT * // ID BA000029_14 STANDARD; PRT; 270 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : orfX FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19865.2 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 78306 - 79115 FT DIRECTIONS : negative FT EDITING : 18 P(cCg) -> L(cTg) FT EDITING : 22 L(Cta) -> L(Tta) FT EDITING : 29 S(tCc) -> F(tTc) FT EDITING : 31 R(Cgg) -> W(Tgg) FT EDITING : 34 I(atC) -> I(atT) FT EDITING : 43 R(Cgt) -> C(Tgt) FT EDITING : 50 S(tCa) -> L(tTa) FT EDITING : 52 S(tCt) -> F(tTt) FT EDITING : 53 P(cCa) -> L(cTa) FT EDITING : 69 R(Cgt) -> C(Tgt) FT EDITING : 72 S(tCa) -> L(tTa) FT EDITING : 76 P(cCc) -> L(cTc) FT EDITING : 77 P(Ccg) -> S(Tcg) FT EDITING : 84 S(tCa) -> L(tTa) FT EDITING : 97 H(Cat) -> Y(Tat) FT EDITING : 103 S(tCg) -> L(tTg) FT EDITING : 119 L(Ctc) -> F(Ttc) FT EDITING : 120 H(Cat) -> Y(Tat) FT EDITING : 124 S(tCt) -> F(tTt) FT EDITING : 125 R(Cgc) -> C(Tgc) FT EDITING : 134 P(cCt) -> L(cTt) FT EDITING : 135 P(Ccc) -> S(Tcc) FT EDITING : 136 R(Cgg) -> W(Tgg) FT EDITING : 145 P(cCa) -> L(cTa) FT EDITING : 155 S(tCg) -> L(tTg) FT EDITING : 156 L(ctC) -> L(ctT) FT EDITING : 178 P(Cca) -> S(Tca) FT EDITING : 192 P(cCa) -> L(cTa) FT EDITING : 194 P(cCa) -> L(cTa) FT EDITING : 213 P(Ccg) -> S(Tcg) FT EDITING : 229 I(atC) -> I(atT) FT EDITING : 232 P(Cct) -> S(Tct) FT EDITING : 234 L(Ctt) -> F(Ttt) FT CODON_START : 1 CL CDNALEN 810 NT; CD 1 atgccgaaaa tgcatttatc ctttgaatta ctcattgaat ggaatttcgc CD 51 acCggaaact tttCtaggag aagttcgaat ccgttCcgtt Cggatattga CD 101 tCggtcttgg tttgacatgg tttacgCgtt actggttctc ggaagagtCa CD 151 atttCtcCat tagctaaacc ctttcttacc ctacctttgg actcgtattt CD 201 tgttCgtaca caatCaacgg aggcccCcCc gacatatgtt gcaacgtctt CD 251 Caatagcatg ctcttacttc gtctttccct taataagtCa tcaaatttgg CD 301 tgcttttCga tccccagttg ctatggggaa caaaggcaga aatacaatag CD 351 attcCtcCat ttaagtggtt CtCgcttctc cttgttcctg ttcctaactc CD 401 CtCccCgggt agttcccaat gtttggcact ttcCatactt cgtgggtgca CD 451 acatcaacaa attCgctCat gatcaagtta caacctaaga tctatgacta CD 501 tattatgtta actgttcgta ttttgttcat tCcatcggta tgctctcagg CD 551 tacctgtaat tgtgatctgt ttgcCagaac Caaggggtct ttctgtggaa CD 601 accttcacga gcaatcgtcg ttttttgatg gtttttCcgc ttatcacagc CD 651 tgctctttcc acacctccgg atatctggtg ccaaatCgtc gccCctttcC CD 701 ttatatattc gataatcgag tttgctatct ttgtggcatt gattgtacaa CD 751 gttcgtgaag agggctggac gattagaatg aggggctcga tcgagaaaaa CD 801 agaggagtag FT EDITED CDNA CD 1 atgccgaaaa tgcatttatc ctttgaatta ctcattgaat ggaatttcgc CD 51 acTggaaact tttTtaggag aagttcgaat ccgttTcgtt Tggatattga CD 101 tTggtcttgg tttgacatgg tttacgTgtt actggttctc ggaagagtTa CD 151 atttTtcTat tagctaaacc ctttcttacc ctacctttgg actcgtattt CD 201 tgttTgtaca caatTaacgg aggcccTcTc gacatatgtt gcaacgtctt CD 251 Taatagcatg ctcttacttc gtctttccct taataagtTa tcaaatttgg CD 301 tgcttttTga tccccagttg ctatggggaa caaaggcaga aatacaatag CD 351 attcTtcTat ttaagtggtt TtTgcttctc cttgttcctg ttcctaactc CD 401 TtTccTgggt agttcccaat gtttggcact ttcTatactt cgtgggtgca CD 451 acatcaacaa attTgctTat gatcaagtta caacctaaga tctatgacta CD 501 tattatgtta actgttcgta ttttgttcat tTcatcggta tgctctcagg CD 551 tacctgtaat tgtgatctgt ttgcTagaac Taaggggtct ttctgtggaa CD 601 accttcacga gcaatcgtcg ttttttgatg gtttttTcgc ttatcacagc CD 651 tgctctttcc acacctccgg atatctggtg ccaaatTgtc gccTctttcT CD 701 ttatatattc gataatcgag tttgctatct ttgtggcatt gattgtacaa CD 751 gttcgtgaag agggctggac gattagaatg aggggctcga tcgagaaaaa CD 801 agaggagtag SQ SEQUENCE 270 AA; MPKMHLSFEL LIEWNFALET FLGEVRIRFV WILIGLGLTW FTCYWFSEEL IFLLAKPFLT LPLDSYFVCT QLTEALSTYV ATSLIACSYF VFPLISYQIW CFLIPSCYGE QRQKYNRFFY LSGFCFSLFL FLTLSWVVPN VWHFLYFVGA TSTNLLMIKL QPKIYDYIML TVRILFISSV CSQVPVIVIC LLELRGLSVE TFTSNRRFLM VFSLITAALS TPPDIWCQIV ASFFIYSIIE FAIFVALIVQ VREEGWTIRM RGSIEKKEE* // ID BA000029_15 STANDARD; PRT; 396 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : nad7 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC19866.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 7 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 48/2 FT INTRON 72/1 FT INTRON 228/0 FT INTRON 309/1 FT EDITING : 13 S(tCg) -> L(tTg) FT EDITING : 15 S(tCC) -> F(tTT) FT EDITING : 26 S(tCa) -> L(tTa) FT EDITING : 28 S(tCa) -> L(tTa) FT EDITING : 33 N(aaC) -> N(aaT) FT EDITING : 46 S(tCa) -> L(tTa) FT EDITING : 71 Q(Cag) -> *(Tag) FT EDITING : 76 R(Cga) -> *(Tga) FT EDITING : 82 L(ctC) -> L(ctT) FT EDITING : 85 Q(Cag) -> *(Tag) FT EDITING : 106 S(tCt) -> F(tTt) FT EDITING : 113 Q(Caa) -> *(Taa) FT EDITING : 116 H(Cac) -> Y(Tac) FT EDITING : 119 Q(Caa) -> *(Taa) FT EDITING : 129 Q(Caa) -> *(Taa) FT EDITING : 150 R(Cgg) -> W(Tgg) FT EDITING : 179 P(Cca) -> S(Tca) FT EDITING : 194 Q(Caa) -> *(Taa) FT EDITING : 227 V(gtC) -> V(gtT) FT EDITING : 234 R(Cgc) -> C(Tgc) FT EDITING : 242 F(ttC) -> F(ttT) FT EDITING : 246 R(Cgg) -> W(Tgg) FT EDITING : 247 I(atC) -> I(atT) FT EDITING : 257 I(atC) -> I(atT) FT EDITING : 280 L(Cta) -> L(Tta) FT EDITING : 310 Q(Caa) -> *(Taa) FT EDITING : 325 L(ctC) -> L(ctT) FT EDITING : 364 H(Cac) -> Y(Tac) FT EDITING : 369 L(Cta) -> L(Tta) FT EDITING : 371 P(cCa) -> L(cTa) FT EDITING : 376 Q(Cag) -> *(Tag) FT CODON_START : 1 CL CDNALEN 1187 NT; CD 1 atgacgacta ggaacgggca aatcaagaat ttcacttCga attCCggacc CD 51 tcaacatcct gctgctcatg gtgtttCacg atCagtattg gaaatgaaCg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggatCact ccaactagag CD 151 ggactgagaa attaatcgag tacaaaactt atcttcaagc tttaccttat CD 201 tttgatcgtt Cagactatgt ttctaCgatg gcccaagaac acgctCattc CD 251 ttCagccgta gagagacttt tgaattgtga ggtaccatta cgagctcaat CD 301 atatacgagt gttattCtgt gaaataactc gaatttCaaa tcattCactt CD 351 gcttCaacta ctcatgctat ggatgtggga gcatCaactc cgttcctttg CD 401 ggcttttgag gagcgggaga aattgttgga attctatgaa agagtccCgg CD 451 gagccaggat gcatgccagt ttcatacgac ctggtggagt ggcacaagat CD 501 ctgcctcttg gcttatgtcg agatattgat tcctCcacac aacaatttgc CD 551 ttctcgtatc gacgaattag aagagatgtC aaccggcaac cgtatctgga CD 601 aacaacgatt agtggatatt ggtactgtca ctgcacagca agcaaaggat CD 651 tggggattca gtggtgtaat gttaagaggt Cctggggtat gctgggattC CD 701 gcgaagagca gcaccttacg atgttCatga ccaatCggat Cttgacgtac CD 751 cagtaggtac cagaggagat Cgctatgatc gttactgtat ccgtatcgaa CD 801 gagatgcgac aaagtgttcg gatcattgtg caatgtcCta atcaaatgcc CD 851 tagtggcatg atcaaagccg atgatcgtaa gctatgtcct ccatcacgat CD 901 ctcgaatgaa actatccatg gaatcctCaa ttcaccattt cgaactttat CD 951 acagaaggtt tttccgtacc agctCcttct acctataccg cagttgaagc CD 1001 acctaaaggt gaatttggtg tctttcttgt cagtaatggg agtaatcgtc CD 1051 cctaccgttg taaaataaga gcacctggct ttgcccattC acaaggactc CD 1101 gattCtatgt cCaaacatca catgcCagca gatgtagtca ccatcatagg CD 1151 tactcaagat attgtgtttg gagaggtaga tagatag FT EDITED CDNA CD 1 atgacgacta ggaacgggca aatcaagaat ttcacttTga attTTggacc CD 51 tcaacatcct gctgctcatg gtgtttTacg atTagtattg gaaatgaaTg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggatTact ccaactagag CD 151 ggactgagaa attaatcgag tacaaaactt atcttcaagc tttaccttat CD 201 tttgatcgtt Tagactatgt ttctaTgatg gcccaagaac acgctTattc CD 251 ttTagccgta gagagacttt tgaattgtga ggtaccatta cgagctcaat CD 301 atatacgagt gttattTtgt gaaataactc gaatttTaaa tcattTactt CD 351 gcttTaacta ctcatgctat ggatgtggga gcatTaactc cgttcctttg CD 401 ggcttttgag gagcgggaga aattgttgga attctatgaa agagtccTgg CD 451 gagccaggat gcatgccagt ttcatacgac ctggtggagt ggcacaagat CD 501 ctgcctcttg gcttatgtcg agatattgat tcctTcacac aacaatttgc CD 551 ttctcgtatc gacgaattag aagagatgtT aaccggcaac cgtatctgga CD 601 aacaacgatt agtggatatt ggtactgtca ctgcacagca agcaaaggat CD 651 tggggattca gtggtgtaat gttaagaggt Tctggggtat gctgggattT CD 701 gcgaagagca gcaccttacg atgttTatga ccaatTggat Tttgacgtac CD 751 cagtaggtac cagaggagat Tgctatgatc gttactgtat ccgtatcgaa CD 801 gagatgcgac aaagtgttcg gatcattgtg caatgtcTta atcaaatgcc CD 851 tagtggcatg atcaaagccg atgatcgtaa gctatgtcct ccatcacgat CD 901 ctcgaatgaa actatccatg gaatcctTaa ttcaccattt cgaactttat CD 951 acagaaggtt tttccgtacc agctTcttct acctataccg cagttgaagc CD 1001 acctaaaggt gaatttggtg tctttcttgt cagtaatggg agtaatcgtc CD 1051 cctaccgttg taaaataaga gcacctggct ttgcccattT acaaggactc CD 1101 gattTtatgt cTaaacatca catgcTagca gatgtagtca ccatcatagg CD 1151 tactcaagat attgtgtttg gagaggtaga tagatag SQ SEQUENCE 396 AA; MTTRNGQIKN FTLNFGPQHP AAHGVLRLVL EMNGEVVERA EPHIGLLQLE GLRN*SSTKL IFKLYLILIV *TMFL*WPKN TLIL*P*RDF *IVRYHYELN IYECYFVK*L EF*IIYLL*L LMLWMWEH*L RSFGLLRSGR NCWNSMKESW EPGCMPVSYD LVEWHKICLL AYVEILIPSH NNLLLVSTN* KRC*PATVSG NND*WILVLS LHSKQRIGDS VV*C*EVLGY AGICEEQHLT MFMTNWILTY Q*VPEEIAMI VTVSVSKRCD KVFGSLCNVL IKCLVA*SKP MIVSYVLHHD LE*NYPWNP* FTISNFIQKV FPYQLLLPIP QLKHLKVNLV SFLSVMGVIV PTVVK*EHLA LPIYKDSILC LNITC*QM*S PS*VLKILCL ER*IDX // ID BA000029_19 STANDARD; PRT; 186 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT pseudo-gene FT GENE : pseudo-rpl16 FT NOTE : Pseudo ribosomal protein L16 FT LOCUS_TAG : FT PROTEIN_ID : FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 174147 - 174704 FT DIRECTIONS : positive FT EDITING : 16 L(ctC) -> L(ctT) FT EDITING : 27 Q(Cag) -> *(Tag) FT EDITING : 31 C(tgC) -> C(tgT) FT EDITING : 75 G(ggC) -> G(ggT) FT EDITING : 76 T(aCC) -> I(aTT) FT EDITING : 96 T(aCa) -> I(aTa) FT EDITING : 119 L(Ctc) -> F(Ttc) FT EDITING : 148 S(tcC) -> S(tcT) FT EDITING : 153 P(cCa) -> L(cTa) FT EDITING : 175 P(cCa) -> L(cTa) FT EDITING : 177 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 558 NT; CD 1 atggaaaaac atcttgtaat gtatttaacc agaaaatcga ttatgctCtt CD 51 gcggaagtat ccactcgtaa cggaatttCa ggtgtcaaag tgCggatctc CD 101 atatagtcaa aataagaagg gacgtgctat atccgaaacg tacgaaatat CD 151 agtaaatata gtaaatgcag atgtagtagg ggttgcgaac cggatggtac CD 201 acaacttggt tttggaagat atggCaCCaa aagttgtaga gctggtcgtc CD 251 tttcatatcg agccattgaa gcagcgcgtc gggctaCaat cgggcaattc CD 301 catcgtgcta tgagcggaca attccgaaga aattgtaaga tatgggtaag CD 351 agttCtcgca gatcttccta ttacggggaa acccgcagaa gttcgaatgg CD 401 gaagaggaaa aggaaatcct acgggttgga ttgctcgtgt gtcCacggga CD 451 caaatccCat ttgaaatgga tggtgtgagt ttgtcaaatg ctcgacaagc CD 501 cgctagatta gcggcgcata aacCatgttC gtcaaccaag tttgttcagt CD 551 ggtcgtaa FT EDITED CDNA CD 1 atggaaaaac atcttgtaat gtatttaacc agaaaatcga ttatgctTtt CD 51 gcggaagtat ccactcgtaa cggaatttTa ggtgtcaaag tgTggatctc CD 101 atatagtcaa aataagaagg gacgtgctat atccgaaacg tacgaaatat CD 151 agtaaatata gtaaatgcag atgtagtagg ggttgcgaac cggatggtac CD 201 acaacttggt tttggaagat atggTaTTaa aagttgtaga gctggtcgtc CD 251 tttcatatcg agccattgaa gcagcgcgtc gggctaTaat cgggcaattc CD 301 catcgtgcta tgagcggaca attccgaaga aattgtaaga tatgggtaag CD 351 agttTtcgca gatcttccta ttacggggaa acccgcagaa gttcgaatgg CD 401 gaagaggaaa aggaaatcct acgggttgga ttgctcgtgt gtcTacggga CD 451 caaatccTat ttgaaatgga tggtgtgagt ttgtcaaatg ctcgacaagc CD 501 cgctagatta gcggcgcata aacTatgttT gtcaaccaag tttgttcagt CD 551 ggtcgtaa SQ SEQUENCE 186 AA; MEKHLVMYLT RKSIMLLRKY PLVTEF*VSK CGSHIVKIRR DVLYPKRTKY SKYSKCRCSR GCEPDGTQLG FGRYGIKSCR AGRLSYRAIE AARRAIIGQF HRAMSGQFRR NCKIWVRVFA DLPITGKPAE VRMGRGKGNP TGWIARVSTG QILFEMDGVS LSNARQAARL AAHKLCLSTK FVQWS* // ID BA000029_20 STANDARD; PRT; 156 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : nad3 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19871.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 175402 - 175869 FT DIRECTIONS : positive FT EDITING : 52 P(cCg) -> L(cTg) FT EDITING : 58 P(CCa) -> L(TTa) FT EDITING : 64 P(CCa) -> L(TTa) FT EDITING : 86 S(tCc) -> F(tTc) FT EDITING : 99 P(cCg) -> L(cTg) FT EDITING : 101 P(Cct) -> S(Tct) FT EDITING : 107 P(CCt) -> F(TTt) FT EDITING : 120 P(Cct) -> S(Tct) FT EDITING : 121 P(cCt) -> L(cTt) FT EDITING : 129 S(tCt) -> F(tTt) FT EDITING : 152 S(tCg) -> L(tTg) FT EDITING : 154 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 468 NT; CD 1 atggacaaca ttttttttgg tgtttacaac gcgagaaacg gctatgaaag CD 51 cgccacagtt cttcagggaa tacggataga tttagcgata aacggctatg CD 101 aaagtgcatt tttgtcggaa tttgcaccta tttgtatcta tttagtgatc CD 151 agtcCgctag tttctttgat tCCactcggt gttccttttC Catttgcttc CD 201 caatagttcg acctatccag aaaaattgtc ggcctacgaa tgtggtttcg CD 251 atccctCcgg tgatgccaga agtcgtttcg atatacgatt ttatcCggtt CD 301 Cctattttat ttattatcCC tgatctggaa gtcacctttt tttttccttg CD 351 ggcagtaCct cCtaacaaga ttgatctgtt tggatCttgg tccatgatgg CD 401 cctttttatt gattttgacg attggatttc tctatgaatg gaaaaggggt CD 451 gcttCggatC gggagtaa FT EDITED CDNA CD 1 atggacaaca ttttttttgg tgtttacaac gcgagaaacg gctatgaaag CD 51 cgccacagtt cttcagggaa tacggataga tttagcgata aacggctatg CD 101 aaagtgcatt tttgtcggaa tttgcaccta tttgtatcta tttagtgatc CD 151 agtcTgctag tttctttgat tTTactcggt gttccttttT Tatttgcttc CD 201 caatagttcg acctatccag aaaaattgtc ggcctacgaa tgtggtttcg CD 251 atccctTcgg tgatgccaga agtcgtttcg atatacgatt ttatcTggtt CD 301 Tctattttat ttattatcTT tgatctggaa gtcacctttt tttttccttg CD 351 ggcagtaTct cTtaacaaga ttgatctgtt tggatTttgg tccatgatgg CD 401 cctttttatt gattttgacg attggatttc tctatgaatg gaaaaggggt CD 451 gcttTggatT gggagtaa SQ SEQUENCE 156 AA; MDNIFFGVYN ARNGYESATV LQGIRIDLAI NGYESAFLSE FAPICIYLVI SLLVSLILLG VPFLFASNSS TYPEKLSAYE CGFDPFGDAR SRFDIRFYLV SILFIIFDLE VTFFFPWAVS LNKIDLFGFW SMMAFLLILT IGFLYEWKRG ALDWE* // ID BA000029_23 STANDARD; PRT; 484 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : rps2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19874.2 FT PROTEIN_NAME : Ribosomal protein S2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 184187 - 185638 FT DIRECTIONS : negative FT EDITING : 4 T(aCc) -> I(aTc) FT EDITING : 68 S(tCg) -> L(tTg) FT EDITING : 135 P(cCc) -> L(cTc) FT EDITING : 142 S(tCc) -> F(tTc) FT EDITING : 160 A(gCg) -> V(gTg) FT EDITING : 225 A(gCa) -> V(gTa) FT EDITING : 249 P(Cct) -> S(Tct) FT EDITING : 257 R(Cgt) -> C(Tgt) FT EDITING : 259 S(tCg) -> L(tTg) FT EDITING : 268 R(Cgt) -> C(Tgt) FT CODON_START : 1 CL CDNALEN 1452 NT; CD 1 atgaaaaaga Ccaatcaaat caaacttttc ttggaaaaac cgacgccaac CD 51 gttaagatca gtctcctttc ttttcggcgg catccttccg cattggcggc CD 101 gagtggaaga gttgggttcg attcccttta tacgcgatgt ggcgaaaaag CD 151 actgattcaa cgaaatatgc catgcctgca ttattactta ccaccagtat CD 201 ctCgggaaac ggaaaaccgg aaatgacaat cctttctatg gtctatacta CD 251 aattactttg tacgaatgca catctcggcg ggcgtcgggt agatgctcac CD 301 catttcaatg tctatatctg tggttccaga agtggaattg ctattctcga CD 351 ttcagacaag acactgattt gtttacgaac cgctcttcat tttataggat CD 401 ctcCcattcg taaaaaatgc cgttCcttcc ttttaaagac caatcattta CD 451 tttcgatgtg agatattgga aaaaatggCg agctgtatca atgattctca CD 501 atggaagatc gggacttttt ttagcaatta tttggctaaa aaaaaaaaat CD 551 tccgtttaag aacgaaaaag ataaattttg ggttgaacca acaacccgat CD 601 tgtgcggtta ttctgaatgc agatagaaag tcttcggtca tactggaagc CD 651 tgctcgatca caaataccta ttgCattctt agttgattcc acgatcccag CD 701 gggaatccca taaaagaatc acttatccca tcccagcgaa tgatCctata CD 751 cagttcgtat atctatttCg tcattCggtc acgaaaacag ggattctgga CD 801 aCgtaaatct gtgcacgaac ccatgcaaac aggcttaaaa gcagtggata CD 851 gcctggttcc tataggccgt ggtcgacgag aacttataat cgggggcaga CD 901 aaaacttcaa tctgtagcgc tacttccaga gttaccaaaa ctcgaagtat CD 951 ctatactgcg gctgacagcg aattattttt agctgtcctg cctttccttt CD 1001 cggaaatgcc agaacaggta gtttcaactg tggagccctt cctttctaca CD 1051 atcccggaac aggtagttcc aacctacatt ccacaaatgc aaaattttat CD 1101 aggtgaaact actaccagtc taccccagct acaaggggag gctggcccga CD 1151 gtaactctac agggggtggg gctgcccctt cttcttcaat ttatctggct CD 1201 tatgcggccg aacacgcatc tttcctaaaa gcaatttctg aggagcttta CD 1251 ccggagagta ggggaacaaa tcaacttaaa gagtcccctg gacgaggaga CD 1301 atataaggaa tatagtctac aagatcatga atgatgattt tgaactcttc CD 1351 ttcgatccca tagaagattt gaaggactgg ctacaattca ttaaggcgaa CD 1401 tccccttagt tttcaggatc ttatacaatt ttggatggca ttagccaaat CD 1451 ag FT EDITED CDNA CD 1 atgaaaaaga Tcaatcaaat caaacttttc ttggaaaaac cgacgccaac CD 51 gttaagatca gtctcctttc ttttcggcgg catccttccg cattggcggc CD 101 gagtggaaga gttgggttcg attcccttta tacgcgatgt ggcgaaaaag CD 151 actgattcaa cgaaatatgc catgcctgca ttattactta ccaccagtat CD 201 ctTgggaaac ggaaaaccgg aaatgacaat cctttctatg gtctatacta CD 251 aattactttg tacgaatgca catctcggcg ggcgtcgggt agatgctcac CD 301 catttcaatg tctatatctg tggttccaga agtggaattg ctattctcga CD 351 ttcagacaag acactgattt gtttacgaac cgctcttcat tttataggat CD 401 ctcTcattcg taaaaaatgc cgttTcttcc ttttaaagac caatcattta CD 451 tttcgatgtg agatattgga aaaaatggTg agctgtatca atgattctca CD 501 atggaagatc gggacttttt ttagcaatta tttggctaaa aaaaaaaaat CD 551 tccgtttaag aacgaaaaag ataaattttg ggttgaacca acaacccgat CD 601 tgtgcggtta ttctgaatgc agatagaaag tcttcggtca tactggaagc CD 651 tgctcgatca caaataccta ttgTattctt agttgattcc acgatcccag CD 701 gggaatccca taaaagaatc acttatccca tcccagcgaa tgatTctata CD 751 cagttcgtat atctatttTg tcattTggtc acgaaaacag ggattctgga CD 801 aTgtaaatct gtgcacgaac ccatgcaaac aggcttaaaa gcagtggata CD 851 gcctggttcc tataggccgt ggtcgacgag aacttataat cgggggcaga CD 901 aaaacttcaa tctgtagcgc tacttccaga gttaccaaaa ctcgaagtat CD 951 ctatactgcg gctgacagcg aattattttt agctgtcctg cctttccttt CD 1001 cggaaatgcc agaacaggta gtttcaactg tggagccctt cctttctaca CD 1051 atcccggaac aggtagttcc aacctacatt ccacaaatgc aaaattttat CD 1101 aggtgaaact actaccagtc taccccagct acaaggggag gctggcccga CD 1151 gtaactctac agggggtggg gctgcccctt cttcttcaat ttatctggct CD 1201 tatgcggccg aacacgcatc tttcctaaaa gcaatttctg aggagcttta CD 1251 ccggagagta ggggaacaaa tcaacttaaa gagtcccctg gacgaggaga CD 1301 atataaggaa tatagtctac aagatcatga atgatgattt tgaactcttc CD 1351 ttcgatccca tagaagattt gaaggactgg ctacaattca ttaaggcgaa CD 1401 tccccttagt tttcaggatc ttatacaatt ttggatggca ttagccaaat CD 1451 ag SQ SEQUENCE 484 AA; MKKINQIKLF LEKPTPTLRS VSFLFGGILP HWRRVEELGS IPFIRDVAKK TDSTKYAMPA LLLTTSILGN GKPEMTILSM VYTKLLCTNA HLGGRRVDAH HFNVYICGSR SGIAILDSDK TLICLRTALH FIGSLIRKKC RFFLLKTNHL FRCEILEKMV SCINDSQWKI GTFFSNYLAK KKKFRLRTKK INFGLNQQPD CAVILNADRK SSVILEAARS QIPIVFLVDS TIPGESHKRI TYPIPANDSI QFVYLFCHLV TKTGILECKS VHEPMQTGLK AVDSLVPIGR GRRELIIGGR KTSICSATSR VTKTRSIYTA ADSELFLAVL PFLSEMPEQV VSTVEPFLST IPEQVVPTYI PQMQNFIGET TTSLPQLQGE AGPSNSTGGG AAPSSSIYLA YAAEHASFLK AISEELYRRV GEQINLKSPL DEENIRNIVY KIMNDDFELF FDPIEDLKDW LQFIKANPLS FQDLIQFWMA LAK* // ID BA000029_24 STANDARD; PRT; 496 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : nad4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC19875.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 154/2 FT INTRON 326/1 FT INTRON 467/1 FT EDITING : 15 P(cCt) -> L(cTt) FT EDITING : 25 T(aCt) -> I(aTt) FT EDITING : 52 P(Ccc) -> S(Tcc) FT EDITING : 55 P(cCt) -> L(cTt) FT EDITING : 56 R(Cgg) -> W(Tgg) FT EDITING : 66 S(tCt) -> F(tTt) FT EDITING : 106 S(tCa) -> L(tTa) FT EDITING : 121 T(aCa) -> I(aTa) FT EDITING : 126 R(Cgt) -> C(Tgt) FT EDITING : 134 S(tCc) -> F(tTc) FT EDITING : 139 P(cCt) -> L(cTt) FT EDITING : 145 L(Ctt) -> F(Ttt) FT EDITING : 146 S(tCc) -> F(tTc) FT EDITING : 150 P(cCa) -> L(cTa) FT EDITING : 326 P(cCg) -> L(cTg) FT EDITING : 458 S(tCc) -> F(tTc) FT EDITING : 469 R(Cgg) -> W(Tgg) FT EDITING : 473 H(Cac) -> Y(Tac) FT EDITING : 478 P(CCg) -> L(TTg) FT CODON_START : 1 CL CDNALEN 1488 NT; CD 1 atgttagaac atttctgtga atgctatttc gatctaagtg gtcCtattct CD 51 ctgtcccgtg ctaggaagca ttaCtcttct tttcattcca aattcttcaa CD 101 taagactgat acgattgatt ggtctgtgcg tttctcttat tacttttttg CD 151 tatCcccttg ttcCtCggat acaattcgat ccttctacgg ccaaatCtca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc catttgtata CD 251 tgggtataga cggtctttca ttattcttcg tgatattgac cacatttctg CD 301 atccctattt gcatttCagt gggttggtct ggtatgagaa gttttgggaa CD 351 agagtatatt aCagcatttc taattCgtga atttctaatg atcgccgtgt CD 401 Cctgcatgct ggatcCtcta ctattctatg ttCtttCcga aagcgtgcCa CD 451 atccctatgt tcatcattat aggggtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctatatac tttactggga tccgttttta CD 551 tgctattagc tattctgttg attcttctcc aaacaggaac caccgattta CD 601 caaattttat taaccacaga atttagtgag cggcgccaaa tccttctatg CD 651 gattgctttt ttcgcctctt ttgccgtcaa agtgcctatg gtaccagttc CD 701 atatttggtt acccgaagcc catgtagagg cacctacggc tggatccgtc CD 751 atcttggctg gaattctttt aaaattggga acctacgggt ttttaagatt CD 801 ttcaataccc atgtttcccg aagcgacact ttgtttcact cctttcattt CD 851 atactctaag cgcgattgct ataatatata cttccttgac cactttaaga CD 901 cagatcgatc ttaagaagat cattgcctac tcctcagtag cccatatgaa CD 951 tttggtgact attggtatgt ttagtcCgaa catacaggga attgggggta CD 1001 gcattttact tatgttaagt catggactgg tttcttcagc cctttttcta CD 1051 tgtgttggtg ttctatatga ccgacataag actcgacttg ttagatatta CD 1101 tggaggttta gtgagcacca tgccgaattt ctctaccatt ttcttctttt CD 1151 tcactttagc caatatgagt ttacccggca ctagcagctt tattggggaa CD 1201 tttctaatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 agcagcgctt gggatgattt taggcgcggc gtattccctt tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacccg atttcctcta taaattctcc CD 1351 gatctaaatg gcagagaagt ttCcatattt ctaccttttc ttgttggagt CD 1401 tgttCggatg ggtgttCacc ccaaagtgtt cCCggattgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggcaaat ttcattga FT EDITED CDNA CD 1 atgttagaac atttctgtga atgctatttc gatctaagtg gtcTtattct CD 51 ctgtcccgtg ctaggaagca ttaTtcttct tttcattcca aattcttcaa CD 101 taagactgat acgattgatt ggtctgtgcg tttctcttat tacttttttg CD 151 tatTcccttg ttcTtTggat acaattcgat ccttctacgg ccaaatTtca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc catttgtata CD 251 tgggtataga cggtctttca ttattcttcg tgatattgac cacatttctg CD 301 atccctattt gcatttTagt gggttggtct ggtatgagaa gttttgggaa CD 351 agagtatatt aTagcatttc taattTgtga atttctaatg atcgccgtgt CD 401 Tctgcatgct ggatcTtcta ctattctatg ttTtttTcga aagcgtgcTa CD 451 atccctatgt tcatcattat aggggtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctatatac tttactggga tccgttttta CD 551 tgctattagc tattctgttg attcttctcc aaacaggaac caccgattta CD 601 caaattttat taaccacaga atttagtgag cggcgccaaa tccttctatg CD 651 gattgctttt ttcgcctctt ttgccgtcaa agtgcctatg gtaccagttc CD 701 atatttggtt acccgaagcc catgtagagg cacctacggc tggatccgtc CD 751 atcttggctg gaattctttt aaaattggga acctacgggt ttttaagatt CD 801 ttcaataccc atgtttcccg aagcgacact ttgtttcact cctttcattt CD 851 atactctaag cgcgattgct ataatatata cttccttgac cactttaaga CD 901 cagatcgatc ttaagaagat cattgcctac tcctcagtag cccatatgaa CD 951 tttggtgact attggtatgt ttagtcTgaa catacaggga attgggggta CD 1001 gcattttact tatgttaagt catggactgg tttcttcagc cctttttcta CD 1051 tgtgttggtg ttctatatga ccgacataag actcgacttg ttagatatta CD 1101 tggaggttta gtgagcacca tgccgaattt ctctaccatt ttcttctttt CD 1151 tcactttagc caatatgagt ttacccggca ctagcagctt tattggggaa CD 1201 tttctaatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 agcagcgctt gggatgattt taggcgcggc gtattccctt tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacccg atttcctcta taaattctcc CD 1351 gatctaaatg gcagagaagt ttTcatattt ctaccttttc ttgttggagt CD 1401 tgttTggatg ggtgttTacc ccaaagtgtt cTTggattgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggcaaat ttcattga SQ SEQUENCE 496 AA; MLEHFCECYF DLSGLILCPV LGSIILLFIP NSSIRLIRLI GLCVSLITFL YSLVLWIQFD PSTAKFQFVE SLRWLPYENI HLYMGIDGLS LFFVILTTFL IPICILVGWS GMRSFGKEYI IAFLICEFLM IAVFCMLDLL LFYVFFESVL IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SVFMLLAILL ILLQTGTTDL QILLTTEFSE RRQILLWIAF FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGILLKLG TYGFLRFSIP MFPEATLCFT PFIYTLSAIA IIYTSLTTLR QIDLKKIIAY SSVAHMNLVT IGMFSLNIQG IGGSILLMLS HGLVSSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNFSTI FFFFTLANMS LPGTSSFIGE FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLYKFS DLNGREVFIF LPFLVGVVWM GVYPKVFLDC MHTSVSNLVQ HGKFH* // ID BA000029_25 STANDARD; PRT; 261 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : cox2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC19876.1 FT PROTEIN_NAME : Cytochrome c oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 130/1 FT EDITING : 5 S(tCa) -> L(tTa) FT EDITING : 10 F(ttC) -> F(ttT) FT EDITING : 11 L(ctC) -> L(ctT) FT EDITING : 26 S(tCt) -> F(tTt) FT EDITING : 48 L(ctC) -> L(ctT) FT EDITING : 56 S(tCa) -> L(tTa) FT EDITING : 57 R(Cgg) -> W(Tgg) FT EDITING : 87 R(Cgg) -> W(Tgg) FT EDITING : 129 R(Cgg) -> W(Tgg) FT EDITING : 150 T(aCg) -> M(aTg) FT EDITING : 156 P(CCa) -> L(TTa) FT EDITING : 161 S(tCa) -> L(tTa) FT EDITING : 184 P(Ccc) -> S(Tcc) FT EDITING : 188 P(cCt) -> L(cTt) FT EDITING : 196 S(tCa) -> L(tTa) FT EDITING : 207 S(tCa) -> L(tTa) FT EDITING : 213 S(tCg) -> L(tTg) FT EDITING : 235 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 783 NT; CD 1 atgattcttc gttCattaga atgtcgattC ctCacaatcg ctctttgtga CD 51 tgctgcggaa ccatggcaat taggatCtca agacgctgca acacctatga CD 101 tgcaaggaat cattgactta catcacgata tctttttctt cctCattctg CD 151 attttggttt tcgtatCaCg gatgttggtt cgcgctttat ggcatttcaa CD 201 cgagcaaact aatccaatcc cgcaaaggat tgttcatgga actactatcg CD 251 aaattattCg gaccatattt cctagtgtca ttcttttgtt cattgctata CD 301 ccatcgtttg ctctgttata ctcaatggac ggggtattag tagatccagc CD 351 cattactatc aaagctattg gacatcaatg gtatCggact tatgagtatt CD 401 cggactataa cagttccgat gaacagtcac tcacttttga cagttataCg CD 451 attccagaag atgatCCaga attgggtcaa tCacgtttat tagaagttga CD 501 caatagagtg gttgtaccag ccaaaactca tctacgtatg attgtaacaC CD 551 ccgctgatgt acCtcatagt tgggctgtac cttcctCagg tgtcaaatgt CD 601 gatgctgtac ctggtcgttC aaatcttacc tccatctCgg tacaacgaga CD 651 aggagtttac tatggtcagt gcagtgagat ttgtggaact aatcatgcct CD 701 ttaCgcctat cgtcgtagaa gcggtgactt tgaaagatta tgcggattgg CD 751 gtatccaatc aattaatcct ccaaaccaac taa FT EDITED CDNA CD 1 atgattcttc gttTattaga atgtcgattT ctTacaatcg ctctttgtga CD 51 tgctgcggaa ccatggcaat taggatTtca agacgctgca acacctatga CD 101 tgcaaggaat cattgactta catcacgata tctttttctt cctTattctg CD 151 attttggttt tcgtatTaTg gatgttggtt cgcgctttat ggcatttcaa CD 201 cgagcaaact aatccaatcc cgcaaaggat tgttcatgga actactatcg CD 251 aaattattTg gaccatattt cctagtgtca ttcttttgtt cattgctata CD 301 ccatcgtttg ctctgttata ctcaatggac ggggtattag tagatccagc CD 351 cattactatc aaagctattg gacatcaatg gtatTggact tatgagtatt CD 401 cggactataa cagttccgat gaacagtcac tcacttttga cagttataTg CD 451 attccagaag atgatTTaga attgggtcaa tTacgtttat tagaagttga CD 501 caatagagtg gttgtaccag ccaaaactca tctacgtatg attgtaacaT CD 551 ccgctgatgt acTtcatagt tgggctgtac cttcctTagg tgtcaaatgt CD 601 gatgctgtac ctggtcgttT aaatcttacc tccatctTgg tacaacgaga CD 651 aggagtttac tatggtcagt gcagtgagat ttgtggaact aatcatgcct CD 701 ttaTgcctat cgtcgtagaa gcggtgactt tgaaagatta tgcggattgg CD 751 gtatccaatc aattaatcct ccaaaccaac taa SQ SEQUENCE 261 AA; MILRLLECRF LTIALCDAAE PWQLGFQDAA TPMMQGIIDL HHDIFFFLIL ILVFVLWMLV RALWHFNEQT NPIPQRIVHG TTIEIIWTIF PSVILLFIAI PSFALLYSMD GVLVDPAITI KAIGHQWYWT YEYSDYNSSD EQSLTFDSYM IPEDDLELGQ LRLLEVDNRV VVPAKTHLRM IVTSADVLHS WAVPSLGVKC DAVPGRLNLT SILVQREGVY YGQCSEICGT NHAFMPIVVE AVTLKDYADW VSNQLILQTN * // ID BA000029_29 STANDARD; PRT; 335 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : atp6 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19880.3 FT PROTEIN_NAME : ATP synthase F0 subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 225271 - 226275 FT DIRECTIONS : negative FT EDITING : 5 H(Cac) -> Y(Tac) FT EDITING : 114 S(tCt) -> F(tTt) FT EDITING : 123 P(cCa) -> L(cTa) FT EDITING : 137 S(tCa) -> L(tTa) FT EDITING : 172 R(Cgc) -> C(Tgc) FT EDITING : 174 S(tCg) -> L(tTg) FT EDITING : 183 R(Cgt) -> C(Tgt) FT EDITING : 185 P(cCc) -> L(cTc) FT EDITING : 250 H(Cat) -> Y(Tat) FT EDITING : 257 S(tCa) -> L(tTa) FT EDITING : 271 S(tCa) -> L(tTa) FT EDITING : 317 H(Cat) -> Y(Tat) FT EDITING : 319 S(tCt) -> F(tTt) FT EDITING : 322 S(tCa) -> L(tTa) FT EDITING : 335 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1005 NT; CD 1 atgaatttcg atCacaatca tgtggtaata atgggtttga atcagagaga CD 51 ctcgatctgg aaactcctca atgattataa cgtgaactcg ttgaagagaa CD 101 ggagacaagc agaaatagac gctttttttg aaccatttga gagggcgcag CD 151 cgtatccgtt tcaataactg gcagaacgga atagagttgt tagatggggc CD 201 tgaatggagg aacggcgata tagttatccc tggaggcggc ggaccagtaa CD 251 tttcaagccc cttggatcaa tttttcattg atccattatt tggtcttgat CD 301 atgggtaact tttatttatc attcacaaat gaatccttgt Ctatggcggt CD 351 aactgtcgtt ttggtgcCat ctttatttgg agttgttacg aaaaagggcg CD 401 ggggaaagtC agtgccaaat gcatggcaat ccttggtaga gcttatttat CD 451 gatttcgtgc tgaacctggt aaacgaacaa ataggtggaa atgttaaaca CD 501 aaagtttttc cctCgcatct Cggtcacttt tactttttcg ttatttCgta CD 551 atcCccaggg tatgataccc tttagcttca cagtgacaag tcattttctc CD 601 attactttgg ctctttcatt ttccattttt ataggcatta cgatcgttgg CD 651 atttcaaaga catgggcttc atttttttag cttcttatta ccagcgggag CD 701 tcccactgcc attagcacct tttttagtac tccttgagct aatctctCat CD 751 tgttttcgtg cattaagctC aggaatacgt ttatttgcta atatgatggc CD 801 cggtcatagt tCagtaaaga ttttaagtgg gttcgcttgg actatgctat CD 851 ttctgaataa tattttctat ttcataggag atcttggtcc cttatttata CD 901 gttctagcat taaccggtct ggaattaggt gtagctatat tacaagctCa CD 951 tgtttCtacg atctCaattt gtatttactt gaatgatgct ataaatctcc CD 1001 atCaa FT EDITED CDNA CD 1 atgaatttcg atTacaatca tgtggtaata atgggtttga atcagagaga CD 51 ctcgatctgg aaactcctca atgattataa cgtgaactcg ttgaagagaa CD 101 ggagacaagc agaaatagac gctttttttg aaccatttga gagggcgcag CD 151 cgtatccgtt tcaataactg gcagaacgga atagagttgt tagatggggc CD 201 tgaatggagg aacggcgata tagttatccc tggaggcggc ggaccagtaa CD 251 tttcaagccc cttggatcaa tttttcattg atccattatt tggtcttgat CD 301 atgggtaact tttatttatc attcacaaat gaatccttgt Ttatggcggt CD 351 aactgtcgtt ttggtgcTat ctttatttgg agttgttacg aaaaagggcg CD 401 ggggaaagtT agtgccaaat gcatggcaat ccttggtaga gcttatttat CD 451 gatttcgtgc tgaacctggt aaacgaacaa ataggtggaa atgttaaaca CD 501 aaagtttttc cctTgcatct Tggtcacttt tactttttcg ttatttTgta CD 551 atcTccaggg tatgataccc tttagcttca cagtgacaag tcattttctc CD 601 attactttgg ctctttcatt ttccattttt ataggcatta cgatcgttgg CD 651 atttcaaaga catgggcttc atttttttag cttcttatta ccagcgggag CD 701 tcccactgcc attagcacct tttttagtac tccttgagct aatctctTat CD 751 tgttttcgtg cattaagctT aggaatacgt ttatttgcta atatgatggc CD 801 cggtcatagt tTagtaaaga ttttaagtgg gttcgcttgg actatgctat CD 851 ttctgaataa tattttctat ttcataggag atcttggtcc cttatttata CD 901 gttctagcat taaccggtct ggaattaggt gtagctatat tacaagctTa CD 951 tgtttTtacg atctTaattt gtatttactt gaatgatgct ataaatctcc CD 1001 atTaa SQ SEQUENCE 335 AA; MNFDYNHVVI MGLNQRDSIW KLLNDYNVNS LKRRRQAEID AFFEPFERAQ RIRFNNWQNG IELLDGAEWR NGDIVIPGGG GPVISSPLDQ FFIDPLFGLD MGNFYLSFTN ESLFMAVTVV LVLSLFGVVT KKGGGKLVPN AWQSLVELIY DFVLNLVNEQ IGGNVKQKFF PCILVTFTFS LFCNLQGMIP FSFTVTSHFL ITLALSFSIF IGITIVGFQR HGLHFFSFLL PAGVPLPLAP FLVLLELISY CFRALSLGIR LFANMMAGHS LVKILSGFAW TMLFLNNIFY FIGDLGPLFI VLALTGLELG VAILQAYVFT ILICIYLNDA INLH* // ID BA000029_31 STANDARD; PRT; 117 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : rps13 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19882.2 FT PROTEIN_NAME : Ribosomal protein S13 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 242491 - 242841 FT DIRECTIONS : negative FT EDITING : 2 S(tCa) -> L(tTa) FT EDITING : 4 I(atC) -> I(atT) FT EDITING : 5 S(tCa) -> L(tTa) FT EDITING : 9 S(tCa) -> L(tTa) FT EDITING : 19 S(tCa) -> L(tTa) FT EDITING : 34 R(Cgt) -> C(Tgt) FT EDITING : 86 R(Cgt) -> C(Tgt) FT EDITING : 96 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 351 NT; CD 1 atgtCatata tCtCaggagc tagatCactt cccgatgaac aagtcagaat CD 51 tgcctCaaca aaaatggatg gaattggacc gaaaaaagcc attcagcttC CD 101 gttatcgatt aggtatcagt gggaacatca agatgaatga gttaactaag CD 151 tatcagatcg accaaattga acaaatgata gctcaagatc atgttgttca CD 201 ttgggaattg aagaggggag aacgagcaga catcgaacga ttaatttcta CD 251 tttctCgtta tcgtggaatt cgtcatcaag atggatCgcc cttacgcggt CD 301 caacgaactc atactaatgc aaggactgct cgcaagctaa ttcggaaatg CD 351 a FT EDITED CDNA CD 1 atgtTatata tTtTaggagc tagatTactt cccgatgaac aagtcagaat CD 51 tgcctTaaca aaaatggatg gaattggacc gaaaaaagcc attcagcttT CD 101 gttatcgatt aggtatcagt gggaacatca agatgaatga gttaactaag CD 151 tatcagatcg accaaattga acaaatgata gctcaagatc atgttgttca CD 201 ttgggaattg aagaggggag aacgagcaga catcgaacga ttaatttcta CD 251 tttctTgtta tcgtggaatt cgtcatcaag atggatTgcc cttacgcggt CD 301 caacgaactc atactaatgc aaggactgct cgcaagctaa ttcggaaatg CD 351 a SQ SEQUENCE 117 AA; MLYILGARLL PDEQVRIALT KMDGIGPKKA IQLCYRLGIS GNIKMNELTK YQIDQIEQMI AQDHVVHWEL KRGERADIER LISISCYRGI RHQDGLPLRG QRTHTNARTA RKLIRK* // ID BA000029_32 STANDARD; PRT; 353 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : rps4 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19883.2 FT PROTEIN_NAME : Ribosomal protein S4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 248580 - 249638 FT DIRECTIONS : negative FT EDITING : 13 P(cCa) -> L(cTa) FT EDITING : 17 R(Cgg) -> W(Tgg) FT EDITING : 55 S(tCa) -> L(tTa) FT EDITING : 93 S(tCg) -> L(tTg) FT EDITING : 97 P(cCg) -> L(cTg) FT EDITING : 112 P(cCg) -> L(cTg) FT EDITING : 161 S(tCa) -> L(tTa) FT EDITING : 289 S(tcC) -> S(tcT) FT EDITING : 302 I(atC) -> I(atT) FT EDITING : 309 S(tCg) -> L(tTg) FT EDITING : 313 H(Cat) -> Y(Tat) FT EDITING : 321 S(tCt) -> F(tTt) FT EDITING : 338 P(cCa) -> L(cTa) FT EDITING : 341 P(cCt) -> L(cTt) FT EDITING : 343 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 1059 NT; CD 1 atgcctgcat taagatttaa aacgtgtcgt ctacttcCag gaaatgttCg CD 51 gaacagagaa ctttctctaa tccaacgccg cattctccga agattgagga CD 101 acaagaggag atccattaaa agaaatcttt ctcagagaga aaatctaaac CD 151 agtaacatca aatCacaaac tacacgaaag ttgtcccttt attatgggga CD 201 tttacccata agggagatgc acagaggaag agaacgaact tcatatatcc CD 251 cttttttact caatcaagaa acaagatCgg acgtgattcC ggttcgtctc CD 301 catttttgtg acactcttcc tcaagcaagg cagcCgataa gtcatcgaag CD 351 ggtttgtttg aataatggac tggtaaccat tactcatttg aaagtttccc CD 401 acggtgatct aatatctttt caagaaaatg acgcgagaac ccgcggtgaa CD 451 gaaataagga gatctttcta tatcgacata tCagttggaa aaatcatagg CD 501 caaattacta ccggtcagaa tctggagaaa aacaaaaaca gaatggttcc CD 551 gcttactcac aactcagagg gtatgccgct tactactcaa atcctggttt CD 601 ttgcaagagt tgcgttctta tatgcaagaa gaagacttag aaagaacaaa CD 651 gaagtttgga tccgcaaaag tatgcttagg cagttccttc gctgagcaca CD 701 acagaatgaa gaggaatttg tttcatttca aatacttctt cttattgaaa CD 751 agaaggaagg aggaagagga attgataaga acaatagggg aagcggaaaa CD 801 ccgaaaaaga gcaataagtc cttttgttta caagtcttct ttatatagaa CD 851 attcgaccta ttgctcCgga tccccgttta ctaggaagat aagaatcaaa CD 901 aggatCgaac tacctactca ttattCggag gtgaatCata gaacactaaa CD 951 agctgtggta tCttatggac ctaacatagg tcacatccct cacgacataa CD 1001 gattgaaaga tcCaaacctt cCtcttCgga gcggaaacgg acgtggccaa CD 1051 aacatataa FT EDITED CDNA CD 1 atgcctgcat taagatttaa aacgtgtcgt ctacttcTag gaaatgttTg CD 51 gaacagagaa ctttctctaa tccaacgccg cattctccga agattgagga CD 101 acaagaggag atccattaaa agaaatcttt ctcagagaga aaatctaaac CD 151 agtaacatca aatTacaaac tacacgaaag ttgtcccttt attatgggga CD 201 tttacccata agggagatgc acagaggaag agaacgaact tcatatatcc CD 251 cttttttact caatcaagaa acaagatTgg acgtgattcT ggttcgtctc CD 301 catttttgtg acactcttcc tcaagcaagg cagcTgataa gtcatcgaag CD 351 ggtttgtttg aataatggac tggtaaccat tactcatttg aaagtttccc CD 401 acggtgatct aatatctttt caagaaaatg acgcgagaac ccgcggtgaa CD 451 gaaataagga gatctttcta tatcgacata tTagttggaa aaatcatagg CD 501 caaattacta ccggtcagaa tctggagaaa aacaaaaaca gaatggttcc CD 551 gcttactcac aactcagagg gtatgccgct tactactcaa atcctggttt CD 601 ttgcaagagt tgcgttctta tatgcaagaa gaagacttag aaagaacaaa CD 651 gaagtttgga tccgcaaaag tatgcttagg cagttccttc gctgagcaca CD 701 acagaatgaa gaggaatttg tttcatttca aatacttctt cttattgaaa CD 751 agaaggaagg aggaagagga attgataaga acaatagggg aagcggaaaa CD 801 ccgaaaaaga gcaataagtc cttttgttta caagtcttct ttatatagaa CD 851 attcgaccta ttgctcTgga tccccgttta ctaggaagat aagaatcaaa CD 901 aggatTgaac tacctactca ttattTggag gtgaatTata gaacactaaa CD 951 agctgtggta tTttatggac ctaacatagg tcacatccct cacgacataa CD 1001 gattgaaaga tcTaaacctt cTtcttTgga gcggaaacgg acgtggccaa CD 1051 aacatataa SQ SEQUENCE 353 AA; MPALRFKTCR LLLGNVWNRE LSLIQRRILR RLRNKRRSIK RNLSQRENLN SNIKLQTTRK LSLYYGDLPI REMHRGRERT SYIPFLLNQE TRLDVILVRL HFCDTLPQAR QLISHRRVCL NNGLVTITHL KVSHGDLISF QENDARTRGE EIRRSFYIDI LVGKIIGKLL PVRIWRKTKT EWFRLLTTQR VCRLLLKSWF LQELRSYMQE EDLERTKKFG SAKVCLGSSF AEHNRMKRNL FHFKYFFLLK RRKEEEELIR TIGEAENRKR AISPFVYKSS LYRNSTYCSG SPFTRKIRIK RIELPTHYLE VNYRTLKAVV FYGPNIGHIP HDIRLKDLNL LLWSGNGRGQ NI* // ID BA000029_33 STANDARD; PRT; 166 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT pseudo-gene FT GENE : pseudo-rps11 FT NOTE : Pseudo ribosomal protein S11; FT LOCUS_TAG : FT PROTEIN_ID : FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 250099 - 250596 FT DIRECTIONS : negative FT EDITING : 2 P(ccC) -> P(ccT) FT EDITING : 26 F(ttC) -> F(ttT) FT EDITING : 28 Q(Cag) -> *(Tag) FT EDITING : 118 F(ttC) -> F(ttT) FT CODON_START : 1 CL CDNALEN 498 NT; CD 1 atgccCcagg aaaaaacaac ggccgagact gataggcctg ggcttgcggg CD 51 tgcaggcagt ttcaaattca agaacttCgt aCagagcatc tcggaggaat CD 101 ataaacaatg tgaacggaaa aagaagagag attttatcca tgtcttactg CD 151 atgaaaaata agacctttgt gaccgtgaca gatgctaggg ggaataaaaa CD 201 gactggggcc tccgcaggtt gtttggggta aataaaaggg cggtctcgtc CD 251 tttctcgata tgctgctgaa gcaactgcgg aacatgtcgg gcgatccgcc CD 301 agaaagatgg gtttaaagtc agttgtcatg aaagtgaaag gatctactta CD 351 tttCcagaaa aagaagaaag tgatcttgag ctggggagaa ggttttcggg CD 401 gtgaaagagt aagagatcaa tctcctatta tgtacatcca cgatgtgacc CD 451 caacttccac ataatgtccc ccgactcctc cctctaccgg gatcgtga FT EDITED CDNA CD 1 atgccTcagg aaaaaacaac ggccgagact gataggcctg ggcttgcggg CD 51 tgcaggcagt ttcaaattca agaacttTgt aTagagcatc tcggaggaat CD 101 ataaacaatg tgaacggaaa aagaagagag attttatcca tgtcttactg CD 151 atgaaaaata agacctttgt gaccgtgaca gatgctaggg ggaataaaaa CD 201 gactggggcc tccgcaggtt gtttggggta aataaaaggg cggtctcgtc CD 251 tttctcgata tgctgctgaa gcaactgcgg aacatgtcgg gcgatccgcc CD 301 agaaagatgg gtttaaagtc agttgtcatg aaagtgaaag gatctactta CD 351 tttTcagaaa aagaagaaag tgatcttgag ctggggagaa ggttttcggg CD 401 gtgaaagagt aagagatcaa tctcctatta tgtacatcca cgatgtgacc CD 451 caacttccac ataatgtccc ccgactcctc cctctaccgg gatcgtga SQ SEQUENCE 166 AA; MPQEKTTAET DRPGLAGAGS FKFKNFV*SI SEEYKQCERK KKRDFIHVLL MKNKTFVTVT DARGNKKTGA SAGCLG*IKG RSRLSRYAAE ATAEHVGRSA RKMGLKSVVM KVKGSTYFQK KKKVILSWGE GFRGERVRDQ SPIMYIHDVT QLPHNVPRLL PLPGS* // ID BA000029_35 STANDARD; PRT; 75 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : atp9 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19885.1 FT PROTEIN_NAME : ATP synthase F0 subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 263141 - 263365 FT DIRECTIONS : positive FT EDITING : 7 S(tCa) -> L(tTa) FT EDITING : 27 V(gtC) -> V(gtT) FT EDITING : 28 L(Ctc) -> F(Ttc) FT EDITING : 31 S(tCg) -> L(tTg) FT EDITING : 64 P(cCa) -> L(cTa) FT EDITING : 69 L(Ctg) -> L(Ttg) FT EDITING : 71 S(tCa) -> L(tTa) FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gagctaaatC aataggtgcc ggagctgcta caattgcttt CD 51 agcgggagct gctgtcggta ttggaaacgt CCtcagttct tCgattcatt CD 101 ccgtggcgcg aaatccttca ttggctaaac aattatttgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca ttgtttgccc Caatgatggc CD 201 ctttCtgatt tCattcgttt tcCga FT EDITED CDNA CD 1 atgttagaag gagctaaatT aataggtgcc ggagctgcta caattgcttt CD 51 agcgggagct gctgtcggta ttggaaacgt TTtcagttct tTgattcatt CD 101 ccgtggcgcg aaatccttca ttggctaaac aattatttgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca ttgtttgccc Taatgatggc CD 201 ctttTtgatt tTattcgttt tcTga SQ SEQUENCE 75 AA; MLEGAKLIGA GAATIALAGA AVGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI LFVF* // ID BA000029_36 STANDARD; PRT; 517 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : rpl2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC19886.1 FT PROTEIN_NAME : Ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 281/0 FT EDITING : 417 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 1549 NT; CD 1 atgagacaaa gcataaaggg gagagcgctt agacatttca ctttgagtac CD 51 ggggaagtcc gcagggagga attcttccgg gcgtattact gtttttcacc CD 101 gagggggtgg atcgaagcga ttgcagcgaa aaattgacct taaacgaagc CD 151 acttcgtcta ttggcattgt ggaaaggatc gaatatgacc ctaatcgttc CD 201 ttctcggatc gctctagtac gatggatcga aggggtgctg cccggccgcc CD 251 agaggaaatt caagacgata gaagagttcg ctctgccgcg taagatcctc CD 301 gaatccacca cggccactat cttttgcctt ttttcgttct cttccctgtc CD 351 ctctcccttg gcccagggag agactgcatc cctttccttc ggcagctctt CD 401 taggtttccc aaggatagcg gtagctgggg caaagcccgc tttcttcgcg CD 451 gagcgaatga gagagaagaa aatcggaaaa aagacgtttt ctctttgcga CD 501 gatccgaaag tggagaacgc attgcgttct ctgggcacat aggatcaaac CD 551 gtaaagcagc gctttcttgg cagagtttga ggcagcaaaa aactttagaa CD 601 cttgttggag ctgctgagca taacgaatcg aagctgaagg cggatcaagg CD 651 tagcttgctc ccaaggcaag tgcttgctta cgctttatgt agtggtcggc CD 701 cttcctacct tcatgcctct agaagcttct acaaagcttt gcttccggta CD 751 gaagctagtc gcttcggtag cttgcccgcc aagccgccta taggcgaagg CD 801 gccgaaggat ggagcgtaca aagtcgatcg tgcacctgtc ggttcgggag CD 851 ccgagccact gcacaggggc ttaggtcaac acttatatat tagccagtca CD 901 tcaattggaa gcgggtaata tggtgataaa ttgcgattgc tccaaacctt CD 951 ctaaaagcgg cttcttgcga cctgcccaga atgctcatac ataccttcgg CD 1001 ttccaagagc ttggacgcac agtgaataaa ggtcgggttg aagggggcag CD 1051 tcagctggca gcttcttggc cacgcccccc tgcttataga cacgagatat CD 1101 tggatctaaa ttcaaaagta ggaaatagca taccattagc tgatatacgt CD 1151 atgggaacat gggtacatga tattgaatgt catccaggtc aaggcgcaaa CD 1201 gctggctcgg gccgcaggaa cttatgctaa aataattaag gagccagccC CD 1251 cacaatgtct tgtgcggcta ccatcgggtg ttgaaaaatt catagattcc CD 1301 cgatgccgag ctactattgg tatagtttcc aatcccaacc atggtgcacg CD 1351 taagcttaga aaagcaggac aaagccggtg gtcaggcaga cgccccattg CD 1401 ttcgtggtgt tgcaatgaat ccagtggatc atcctcatgg aggaggtgag CD 1451 gggcgcacga aaggaggtag accttcggtg tcaccttggg ggaagcccac CD 1501 caaagcagga tttcgggcag gagtgggggt ggggaaacgc agaatttag FT EDITED CDNA CD 1 atgagacaaa gcataaaggg gagagcgctt agacatttca ctttgagtac CD 51 ggggaagtcc gcagggagga attcttccgg gcgtattact gtttttcacc CD 101 gagggggtgg atcgaagcga ttgcagcgaa aaattgacct taaacgaagc CD 151 acttcgtcta ttggcattgt ggaaaggatc gaatatgacc ctaatcgttc CD 201 ttctcggatc gctctagtac gatggatcga aggggtgctg cccggccgcc CD 251 agaggaaatt caagacgata gaagagttcg ctctgccgcg taagatcctc CD 301 gaatccacca cggccactat cttttgcctt ttttcgttct cttccctgtc CD 351 ctctcccttg gcccagggag agactgcatc cctttccttc ggcagctctt CD 401 taggtttccc aaggatagcg gtagctgggg caaagcccgc tttcttcgcg CD 451 gagcgaatga gagagaagaa aatcggaaaa aagacgtttt ctctttgcga CD 501 gatccgaaag tggagaacgc attgcgttct ctgggcacat aggatcaaac CD 551 gtaaagcagc gctttcttgg cagagtttga ggcagcaaaa aactttagaa CD 601 cttgttggag ctgctgagca taacgaatcg aagctgaagg cggatcaagg CD 651 tagcttgctc ccaaggcaag tgcttgctta cgctttatgt agtggtcggc CD 701 cttcctacct tcatgcctct agaagcttct acaaagcttt gcttccggta CD 751 gaagctagtc gcttcggtag cttgcccgcc aagccgccta taggcgaagg CD 801 gccgaaggat ggagcgtaca aagtcgatcg tgcacctgtc ggttcgggag CD 851 ccgagccact gcacaggggc ttaggtcaac acttatatat tagccagtca CD 901 tcaattggaa gcgggtaata tggtgataaa ttgcgattgc tccaaacctt CD 951 ctaaaagcgg cttcttgcga cctgcccaga atgctcatac ataccttcgg CD 1001 ttccaagagc ttggacgcac agtgaataaa ggtcgggttg aagggggcag CD 1051 tcagctggca gcttcttggc cacgcccccc tgcttataga cacgagatat CD 1101 tggatctaaa ttcaaaagta ggaaatagca taccattagc tgatatacgt CD 1151 atgggaacat gggtacatga tattgaatgt catccaggtc aaggcgcaaa CD 1201 gctggctcgg gccgcaggaa cttatgctaa aataattaag gagccagccT CD 1251 cacaatgtct tgtgcggcta ccatcgggtg ttgaaaaatt catagattcc CD 1301 cgatgccgag ctactattgg tatagtttcc aatcccaacc atggtgcacg CD 1351 taagcttaga aaagcaggac aaagccggtg gtcaggcaga cgccccattg CD 1401 ttcgtggtgt tgcaatgaat ccagtggatc atcctcatgg aggaggtgag CD 1451 gggcgcacga aaggaggtag accttcggtg tcaccttggg ggaagcccac CD 1501 caaagcagga tttcgggcag gagtgggggt ggggaaacgc agaatttag SQ SEQUENCE 517 AA; MRQSIKGRAL RHFTLSTGKS AGRNSSGRIT VFHRGGGSKR LQRKIDLKRS TSSIGIVERI EYDPNRSSRI ALVRWIEGVL PGRQRKFKTI EEFALPRKIL ESTTATIFCL FSFSSLSSPL AQGETASLSF GSSLGFPRIA VAGAKPAFFA ERMREKKIGK KTFSLCEIRK WRTHCVLWAH RIKRKAALSW QSLRQQKTLE LVGAAEHNES KLKADQGSLL PRQVLAYALC SGRPSYLHAS RSFYKALLPV EASRFGSLPA KPPIGEGPKD GAYKVDRAPV GSGAEPLHRG LGQHLYISQS SIGSG*YGDK LRLLQTF*KR LLATCPECSY IPSVPRAWTH SE*RSG*RGQ SAGSFLATPP CL*TRDIGSK FKSRK*HTIS *YTYGNMGT* Y*MSSRSRRK AGSGRRNLC* NN*GASLTMS CAATIGC*KI HRFPMPSYYW YSFQSQPWCT *A*KSRTKPV VRQTPHCSWC CNESSGSSSW RR*GAHERR* TFGVTLGEAH QSRISGRSGG GETQNLX // ID BA000029_37 STANDARD; PRT; 94 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : rps19 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19887.2 FT PROTEIN_NAME : Ribosomal protein S19 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 297685 - 297966 FT DIRECTIONS : positive FT EDITING : 26 L(Ctg) -> L(Ttg) FT EDITING : 39 S(tCg) -> L(tTg) FT EDITING : 42 F(ttC) -> F(ttT) FT EDITING : 46 S(tcC) -> S(tcT) FT EDITING : 55 P(CCt) -> F(TTt) FT CODON_START : 1 CL CDNALEN 282 NT; CD 1 atgccacgac gatctatatg gaagggaagt tttgttgatg ctttcctgtt CD 51 tagaataaag aagaacagag aaagtCtgat gagcaggaaa atttggtcac CD 101 gtagatcttc tatttCgccg gaattCgttg attgctcCgt actcatttac CD 151 aatggaaaaa ctCCtgttcg ttgtaagatc actgaaggaa aggttggtca CD 201 taaatttgga gagtttgctt ttacacggag acgaagaccc tatcaaacaa CD 251 atagaggaaa gggcagaaag gggaaaaagt aa FT EDITED CDNA CD 1 atgccacgac gatctatatg gaagggaagt tttgttgatg ctttcctgtt CD 51 tagaataaag aagaacagag aaagtTtgat gagcaggaaa atttggtcac CD 101 gtagatcttc tatttTgccg gaattTgttg attgctcTgt actcatttac CD 151 aatggaaaaa ctTTtgttcg ttgtaagatc actgaaggaa aggttggtca CD 201 taaatttgga gagtttgctt ttacacggag acgaagaccc tatcaaacaa CD 251 atagaggaaa gggcagaaag gggaaaaagt aa SQ SEQUENCE 94 AA; MPRRSIWKGS FVDAFLFRIK KNRESLMSRK IWSRRSSILP EFVDCSVLIY NGKTFVRCKI TEGKVGHKFG EFAFTRRRRP YQTNRGKGRK GKK* // ID BA000029_38 STANDARD; PRT; 101 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : nad4L FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19888.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 298829 - 299131 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 3 P(cCt) -> L(cTt) FT EDITING : 14 S(tCt) -> F(tTt) FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 32 S(tCa) -> L(tTa) FT EDITING : 34 P(Cca) -> S(Tca) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 60 S(tCa) -> L(tTa) FT EDITING : 63 S(tCa) -> L(tTa) FT EDITING : 66 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatcCta taaaatattt cactttttct atgatcatct Ctattttagg CD 51 tattCgggga atcctcctta atagacgaaa tattcttatt atgtCaatgC CD 101 caattgaatC aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatCa tttgcttCat tagttcCaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttcgagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggatcTta taaaatattt cactttttct atgatcatct Ttattttagg CD 51 tattTgggga atcctcctta atagacgaaa tattcttatt atgtTaatgT CD 101 caattgaatT aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatTa tttgcttTat tagttcTaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttcgagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDLIKYFTFS MIIFILGIWG ILLNRRNILI MLMSIELMLL AVNLNFLVFS VSLDDMMGQL FALLVLTVAA AESAIGLAIF VITFRVRGTI AVEFINCIQG * // ID BA000029_40 STANDARD; PRT; 398 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : cob FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19890.2 FT PROTEIN_NAME : Apocytochrome b FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 303848 - 305041 FT DIRECTIONS : negative FT EDITING : 60 H(Cac) -> Y(Tac) FT EDITING : 96 L(Ctc) -> F(Ttc) FT EDITING : 100 H(Cac) -> Y(Tac) FT EDITING : 109 H(Cat) -> Y(Tat) FT EDITING : 140 P(cCa) -> L(cTa) FT EDITING : 188 L(ctC) -> L(ctT) FT EDITING : 190 H(Cat) -> Y(Tat) FT EDITING : 194 L(Ctt) -> F(Ttt) FT EDITING : 227 S(tCt) -> F(tTt) FT EDITING : 239 R(Cgg) -> W(Tgg) FT EDITING : 242 S(tCt) -> F(tTt) FT EDITING : 270 P(Ccc) -> S(Tcc) FT EDITING : 285 H(Cat) -> Y(Tat) FT EDITING : 303 P(cCa) -> L(cTa) FT EDITING : 328 H(Cac) -> Y(Tac) FT EDITING : 361 P(Cct) -> S(Tct) FT EDITING : 366 F(ttC) -> F(ttT) FT EDITING : 373 P(ccC) -> P(ccT) FT EDITING : 375 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 1194 NT; CD 1 atgactataa ggaaccaacg attctctctt cttaaacaac ctatatactc CD 51 cacacttaac cagcatttga tagattatcc aactccgagc aatcttagtt CD 101 attggtgggg gttcggttcg ttagcaggta tttgtttagt cattcagata CD 151 gtgactggcg tttttttagc tatgcatCac acacctcatg tggatctagc CD 201 tttcaacagc gtagaacaca ttatgagaga tgttgaaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttCtcat tgtggttCac CD 301 cttcatattt ttcgtggtct atatCatgcg agttatagca gtcctaggga CD 351 atttgtttgg tgtctcggag ttgtcatatt cctattaatg attgtgacag CD 401 cttttatagg atacgtacCa ccttggggtc agatgagctt ttggggagca CD 451 acagtaatta caagcttagc tagcgccata ccagtagtag gagataccat CD 501 agtgacttgg ctttggggtg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tctCcatCat ttactccccC ttattttagt aggcgccagt CD 601 cttcttcatc tggctgcatt gcatcaatat ggatcaaata atccattggg CD 651 tgtacattct gagatggata aaatagcttC ttacccttat ttttatgtaa CD 701 aggatcttgt aggtCgggta gcttCtgcta tctttttttc catttggatt CD 751 ttttttgctc ctaatgtttt ggggcatccc gacaattata tacctgctaa CD 801 tccgatgCcc accccgcctc atattgtgcc ggaatggtat ttcctaccga CD 851 tcCatgccat tcttcgcagt atacctgaca aagcgggagg tgtagccgca CD 901 atagcacCag tttttatatc tctcttggct ttaccttttt ttaaagaaat CD 951 gtatgtgcgt agttcaagtt ttcgaccgat tCaccaagga atattttggt CD 1001 tgcttttggc ggattgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaggcaccat ttgttactat tggacaaatt Ccttctttct ttttcttCtt CD 1101 gttctttgcc ataacgccCa ttcCgggacg agttggaaga ggaattccaa CD 1151 aatattacac ggatgagact catcgcaccg gatcagtctc ttag FT EDITED CDNA CD 1 atgactataa ggaaccaacg attctctctt cttaaacaac ctatatactc CD 51 cacacttaac cagcatttga tagattatcc aactccgagc aatcttagtt CD 101 attggtgggg gttcggttcg ttagcaggta tttgtttagt cattcagata CD 151 gtgactggcg tttttttagc tatgcatTac acacctcatg tggatctagc CD 201 tttcaacagc gtagaacaca ttatgagaga tgttgaaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttTtcat tgtggttTac CD 301 cttcatattt ttcgtggtct atatTatgcg agttatagca gtcctaggga CD 351 atttgtttgg tgtctcggag ttgtcatatt cctattaatg attgtgacag CD 401 cttttatagg atacgtacTa ccttggggtc agatgagctt ttggggagca CD 451 acagtaatta caagcttagc tagcgccata ccagtagtag gagataccat CD 501 agtgacttgg ctttggggtg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tctTcatTat ttactccccT ttattttagt aggcgccagt CD 601 cttcttcatc tggctgcatt gcatcaatat ggatcaaata atccattggg CD 651 tgtacattct gagatggata aaatagcttT ttacccttat ttttatgtaa CD 701 aggatcttgt aggtTgggta gcttTtgcta tctttttttc catttggatt CD 751 ttttttgctc ctaatgtttt ggggcatccc gacaattata tacctgctaa CD 801 tccgatgTcc accccgcctc atattgtgcc ggaatggtat ttcctaccga CD 851 tcTatgccat tcttcgcagt atacctgaca aagcgggagg tgtagccgca CD 901 atagcacTag tttttatatc tctcttggct ttaccttttt ttaaagaaat CD 951 gtatgtgcgt agttcaagtt ttcgaccgat tTaccaagga atattttggt CD 1001 tgcttttggc ggattgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaggcaccat ttgttactat tggacaaatt Tcttctttct ttttcttTtt CD 1101 gttctttgcc ataacgccTa ttcTgggacg agttggaaga ggaattccaa CD 1151 aatattacac ggatgagact catcgcaccg gatcagtctc ttag SQ SEQUENCE 398 AA; MTIRNQRFSL LKQPIYSTLN QHLIDYPTPS NLSYWWGFGS LAGICLVIQI VTGVFLAMHY TPHVDLAFNS VEHIMRDVEG GWLLRYMHAN GASMFFIVVY LHIFRGLYYA SYSSPREFVW CLGVVIFLLM IVTAFIGYVL PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNRFFSLHY LLPFILVGAS LLHLAALHQY GSNNPLGVHS EMDKIAFYPY FYVKDLVGWV AFAIFFSIWI FFAPNVLGHP DNYIPANPMS TPPHIVPEWY FLPIYAILRS IPDKAGGVAA IALVFISLLA LPFFKEMYVR SSSFRPIYQG IFWLLLADCL LLGWIGCQPV EAPFVTIGQI SSFFFFLFFA ITPILGRVGR GIPKYYTDET HRTGSVS* // ID BA000029_42 STANDARD; PRT; 173 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : rps1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19892.2 FT PROTEIN_NAME : Ribosomal protein S1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 321368 - 321886 FT DIRECTIONS : negative FT EDITING : 79 S(tCc) -> F(tTc) FT EDITING : 126 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 519 NT; CD 1 atgttcttgg tggatgcagg ccttggtacc cccaaaattt gtatgcaaga CD 51 tgagcttaca ggactgccaa tcaagcgagc caccaggttt gagaataagg CD 101 tgggatccaa gaatgtagtg gctggtgaat cactgatcaa aaagcggatt CD 151 gaagagagat tcttcatcga tctagtggcc ggtgaatcac tgatcaaaga CD 201 gcgagcagcc gccaggttta atgattttgt gggatCcctg gatgtagcgg CD 251 ctggcgaacc gcttcttctt ccacaaagat tcagacaaaa ccgagcttgg CD 301 atagaactga agaagatttg gcaaacgaag aaaaaggtca aagggtttcg CD 351 tattaaaaaa atcaaaggag gttattCagt agccatcgca ggtttcatta CD 401 cttttcttcc attcgctaaa aaaaaaaaaa ggatagcgaa tgatcgattc CD 451 accattgata gctttaaccc taaaaggagg gatattgtga taatagcggc CD 501 agatcaaaca agaacttga FT EDITED CDNA CD 1 atgttcttgg tggatgcagg ccttggtacc cccaaaattt gtatgcaaga CD 51 tgagcttaca ggactgccaa tcaagcgagc caccaggttt gagaataagg CD 101 tgggatccaa gaatgtagtg gctggtgaat cactgatcaa aaagcggatt CD 151 gaagagagat tcttcatcga tctagtggcc ggtgaatcac tgatcaaaga CD 201 gcgagcagcc gccaggttta atgattttgt gggatTcctg gatgtagcgg CD 251 ctggcgaacc gcttcttctt ccacaaagat tcagacaaaa ccgagcttgg CD 301 atagaactga agaagatttg gcaaacgaag aaaaaggtca aagggtttcg CD 351 tattaaaaaa atcaaaggag gttattTagt agccatcgca ggtttcatta CD 401 cttttcttcc attcgctaaa aaaaaaaaaa ggatagcgaa tgatcgattc CD 451 accattgata gctttaaccc taaaaggagg gatattgtga taatagcggc CD 501 agatcaaaca agaacttga SQ SEQUENCE 173 AA; MFLVDAGLGT PKICMQDELT GLPIKRATRF ENKVGSKNVV AGESLIKKRI EERFFIDLVA GESLIKERAA ARFNDFVGFL DVAAGEPLLL PQRFRQNRAW IELKKIWQTK KKVKGFRIKK IKGGYLVAIA GFITFLPFAK KKKRIANDRF TIDSFNPKRR DIVIIAADQT RT* // ID BA000029_43 STANDARD; PRT; 595 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : ccmFn FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19893.2 FT PROTEIN_NAME : Cytochrome c biogenesis Fn FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 322071 - 323855 FT DIRECTIONS : negative FT EDITING : 13 P(cCg) -> L(cTg) FT EDITING : 33 P(cCt) -> L(cTt) FT EDITING : 41 P(Cct) -> S(Tct) FT EDITING : 46 S(tCg) -> L(tTg) FT EDITING : 48 R(Cgt) -> C(Tgt) FT EDITING : 83 S(tCa) -> L(tTa) FT EDITING : 124 F(ttC) -> F(ttT) FT EDITING : 157 R(Cgt) -> C(Tgt) FT EDITING : 184 L(Ctt) -> F(Ttt) FT EDITING : 233 S(tCt) -> F(tTt) FT EDITING : 236 S(tCa) -> L(tTa) FT EDITING : 249 R(Cgt) -> C(Tgt) FT EDITING : 256 S(tCa) -> L(tTa) FT EDITING : 260 P(cCa) -> L(cTa) FT EDITING : 265 S(tCa) -> L(tTa) FT EDITING : 315 R(Cgc) -> C(Tgc) FT EDITING : 316 S(tCt) -> F(tTt) FT EDITING : 420 R(Cgg) -> W(Tgg) FT EDITING : 429 P(cCa) -> L(cTa) FT EDITING : 435 H(Cat) -> Y(Tat) FT EDITING : 440 R(Cgg) -> W(Tgg) FT EDITING : 446 R(Cgg) -> W(Tgg) FT EDITING : 457 R(Cgg) -> W(Tgg) FT EDITING : 463 R(Cgt) -> C(Tgt) FT EDITING : 477 S(tCg) -> L(tTg) FT EDITING : 484 L(Ctt) -> F(Ttt) FT EDITING : 485 P(cCa) -> L(cTa) FT EDITING : 489 S(tCa) -> L(tTa) FT EDITING : 501 P(Ccc) -> S(Tcc) FT EDITING : 505 S(tCt) -> F(tTt) FT EDITING : 517 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 1785 NT; CD 1 atgtctataa atgaattttc tcattatttg ttatttcCgg gtcttttcgt CD 51 tgcattcact tacaacaaga aacaaccacc agcgtttggt gcagcacCtg CD 101 cattttggtg cattcttctt Cctttccttg gtctttCgtt cCgtcatatt CD 151 ccaaataact tatctaatta caacgtatta accggtaatg catctttttt CD 201 ttatcaaatc tcaggggcat ggtctaatca tgagggtagt attttatCat CD 251 ggtgttggat cccaagtttt tatggattcc ttttttgtta ccggggtcga CD 301 ccccaaagcc ataatgtctc aaaacgaaga ggctatagag aaacttttat CD 351 tttttccttt gtctcgaact tCgtgaagaa ctccattcta tctctccaac CD 401 aaaaaagtgg ggctgcgccc cagttgtaca cccccttcgt tcggagaacc CD 451 tttgttgatt ctgaacttCg ttcgcaaagt aagcgtcctt ttaacgggcc CD 501 agcccttttt aatgcgccgc ttgaccctgt tttgaaaatg agctttgctC CD 551 ttctgggcgc tgggcgctcc cgtggttcgc gagaaggaaa aaggactaat CD 601 cttttgttac atctggcacg agatgaaaaa gagagagctt cgtctatcga CD 651 tgaacagcag attgacggag ctcttgccat tgctttgttt ttctcttCtt CD 701 tcctatCagc gagttccgat ccttttgttc gaaatttctt cgttCgtacc CD 751 gaaccgcttg cagaatCaaa tcctgttcCa caagatccta tatCagctat CD 801 acatcctcct tgcatttatg ccggagacgt cgccagtgct atgggctttg CD 851 ggttatgtag atcaaaaatg atgaatggga ttgtggcact ccactcgccg CD 901 ccaatgcgga aggatgccgc cgaaaagaat ggaacgctgc ttCgctCtgc CD 951 tggatgcgtc ggatcccata taagaagctc gctctttacc cgatcattca CD 1001 aacattttgt gggcggcgcg cctgctctat tgttgcgtag caatagaagc CD 1051 ctgctcatgc tgcttcggcg gcgctttttc gccttctctt cgctctggac CD 1101 aggagcgcta atggacacgg ggagggagca ggcgaagcgt gtcgttcgta CD 1151 atggaaagaa agacaccact acttcgcctc tttgttggac cgccggcgcg CD 1201 aacacagtgg tctctgacca ggaccaggaa ccaattcgaa tttggatctt CD 1251 gacatgtCgg ttgtttttaa ccgtaggcat ctcgcCagga agttggtggg CD 1301 ctCatcatga attaggtCgg ggtggctggt ggtttCggga tcccgtagaa CD 1351 aatgcgtctt ttatgcctCg ggtattagcc acagctCgta ttcattcagt CD 1401 aattctaccc cttcttcatt cttggacctC gctcctgaat attttgactC CD 1451 ttcCatgctg tgtctCagga accttttcaa tacggtccgg attgctagct CD 1501 Cccgttcata gttCtgctac agacgataca cgaggaagat ttttatggCg CD 1551 gttcttcctt ctaattacag gcatatctat gactcttttt taccagatga CD 1601 agcaggaggc atcggtccgt agaacctata aaaaagagat ggttgtggcg CD 1651 cgaagtactc ttgtgcacct acgtcactcg gctcgcgcgc aaccccgccc CD 1701 cgttatgtta tggaagaatt tagcttattg ctgggctggt tattcagagc CD 1751 cagcaactgg ctgccggatt tcgtcccgtc cgtag FT EDITED CDNA CD 1 atgtctataa atgaattttc tcattatttg ttatttcTgg gtcttttcgt CD 51 tgcattcact tacaacaaga aacaaccacc agcgtttggt gcagcacTtg CD 101 cattttggtg cattcttctt Tctttccttg gtctttTgtt cTgtcatatt CD 151 ccaaataact tatctaatta caacgtatta accggtaatg catctttttt CD 201 ttatcaaatc tcaggggcat ggtctaatca tgagggtagt attttatTat CD 251 ggtgttggat cccaagtttt tatggattcc ttttttgtta ccggggtcga CD 301 ccccaaagcc ataatgtctc aaaacgaaga ggctatagag aaacttttat CD 351 tttttccttt gtctcgaact tTgtgaagaa ctccattcta tctctccaac CD 401 aaaaaagtgg ggctgcgccc cagttgtaca cccccttcgt tcggagaacc CD 451 tttgttgatt ctgaacttTg ttcgcaaagt aagcgtcctt ttaacgggcc CD 501 agcccttttt aatgcgccgc ttgaccctgt tttgaaaatg agctttgctT CD 551 ttctgggcgc tgggcgctcc cgtggttcgc gagaaggaaa aaggactaat CD 601 cttttgttac atctggcacg agatgaaaaa gagagagctt cgtctatcga CD 651 tgaacagcag attgacggag ctcttgccat tgctttgttt ttctcttTtt CD 701 tcctatTagc gagttccgat ccttttgttc gaaatttctt cgttTgtacc CD 751 gaaccgcttg cagaatTaaa tcctgttcTa caagatccta tatTagctat CD 801 acatcctcct tgcatttatg ccggagacgt cgccagtgct atgggctttg CD 851 ggttatgtag atcaaaaatg atgaatggga ttgtggcact ccactcgccg CD 901 ccaatgcgga aggatgccgc cgaaaagaat ggaacgctgc ttTgctTtgc CD 951 tggatgcgtc ggatcccata taagaagctc gctctttacc cgatcattca CD 1001 aacattttgt gggcggcgcg cctgctctat tgttgcgtag caatagaagc CD 1051 ctgctcatgc tgcttcggcg gcgctttttc gccttctctt cgctctggac CD 1101 aggagcgcta atggacacgg ggagggagca ggcgaagcgt gtcgttcgta CD 1151 atggaaagaa agacaccact acttcgcctc tttgttggac cgccggcgcg CD 1201 aacacagtgg tctctgacca ggaccaggaa ccaattcgaa tttggatctt CD 1251 gacatgtTgg ttgtttttaa ccgtaggcat ctcgcTagga agttggtggg CD 1301 ctTatcatga attaggtTgg ggtggctggt ggtttTggga tcccgtagaa CD 1351 aatgcgtctt ttatgcctTg ggtattagcc acagctTgta ttcattcagt CD 1401 aattctaccc cttcttcatt cttggacctT gctcctgaat attttgactT CD 1451 ttcTatgctg tgtctTagga accttttcaa tacggtccgg attgctagct CD 1501 Tccgttcata gttTtgctac agacgataca cgaggaagat ttttatggTg CD 1551 gttcttcctt ctaattacag gcatatctat gactcttttt taccagatga CD 1601 agcaggaggc atcggtccgt agaacctata aaaaagagat ggttgtggcg CD 1651 cgaagtactc ttgtgcacct acgtcactcg gctcgcgcgc aaccccgccc CD 1701 cgttatgtta tggaagaatt tagcttattg ctgggctggt tattcagagc CD 1751 cagcaactgg ctgccggatt tcgtcccgtc cgtag SQ SEQUENCE 595 AA; MSINEFSHYL LFLGLFVAFT YNKKQPPAFG AALAFWCILL SFLGLLFCHI PNNLSNYNVL TGNASFFYQI SGAWSNHEGS ILLWCWIPSF YGFLFCYRGR PQSHNVSKRR GYRETFIFSF VSNFVKNSIL SLQQKSGAAP QLYTPFVRRT FVDSELCSQS KRPFNGPALF NAPLDPVLKM SFAFLGAGRS RGSREGKRTN LLLHLARDEK ERASSIDEQQ IDGALAIALF FSFFLLASSD PFVRNFFVCT EPLAELNPVL QDPILAIHPP CIYAGDVASA MGFGLCRSKM MNGIVALHSP PMRKDAAEKN GTLLCFAGCV GSHIRSSLFT RSFKHFVGGA PALLLRSNRS LLMLLRRRFF AFSSLWTGAL MDTGREQAKR VVRNGKKDTT TSPLCWTAGA NTVVSDQDQE PIRIWILTCW LFLTVGISLG SWWAYHELGW GGWWFWDPVE NASFMPWVLA TACIHSVILP LLHSWTLLLN ILTFLCCVLG TFSIRSGLLA SVHSFATDDT RGRFLWWFFL LITGISMTLF YQMKQEASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML WKNLAYCWAG YSEPATGCRI SSRP* // ID BA000029_44 STANDARD; PRT; 436 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : ccmFc FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19894.1 FT PROTEIN_NAME : Cytochrome c biogenesis Fc FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 250/2 FT EDITING : 13 S(tCc) -> F(tTc) FT EDITING : 17 P(cCc) -> L(cTc) FT EDITING : 18 R(Cgt) -> C(Tgt) FT EDITING : 35 P(Ccc) -> S(Tcc) FT EDITING : 40 S(tCt) -> F(tTt) FT EDITING : 41 S(tCC) -> F(tTT) FT EDITING : 49 P(cCt) -> L(cTt) FT EDITING : 54 P(Cct) -> S(Tct) FT EDITING : 64 F(ttC) -> F(ttT) FT EDITING : 101 R(Cgt) -> C(Tgt) FT EDITING : 102 F(ttC) -> F(ttT) FT EDITING : 109 L(Ctt) -> F(Ttt) FT EDITING : 133 R(Cgt) -> C(Tgt) FT EDITING : 158 R(Cgg) -> W(Tgg) FT EDITING : 181 V(gtC) -> V(gtT) FT EDITING : 194 S(tCg) -> L(tTg) FT EDITING : 287 S(tCt) -> F(tTt) FT EDITING : 300 S(tcC) -> S(tcT) FT EDITING : 320 P(ccC) -> P(ccT) FT EDITING : 336 L(Ctg) -> L(Ttg) FT EDITING : 361 S(tcC) -> S(tcT) FT EDITING : 377 P(cCa) -> L(cTa) FT EDITING : 384 S(tCg) -> L(tTg) FT EDITING : 409 R(Cgg) -> W(Tgg) FT EDITING : 417 S(tCg) -> L(tTg) FT EDITING : 436 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1308 NT; CD 1 atggtccaac tacagaactt cttctttttc attacttCca tggtcgtgcC CD 51 cCgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttCccactgg tgcctcttCt tCCaatggta ctataattcc tattcCtatc CD 151 tctttattcC cttttttggt ctatctacat tcaaggaaat tCatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaataggg agaagctcat ccgctagaaa tgctttattt CD 301 CgtttCgttc ccgttcttca tttcCttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttCgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tCggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtCgaaggtt CD 551 ttgggcctgt agctttcccc gctcccccct Cgtcgagtgg tgcttgtttg CD 601 gggccacctg aaatcgggct tgaagctctc gccttaccaa cgagccgact CD 651 gctgatggct gttggtcacg actactacaa aaaagtgaag atgaatcttt CD 701 ctatttcaca tggaggagtg tgcatcttta tgttgggtgt tcttctgtct CD 751 aatacgaata agatacagtt cactcaacga ttgcctttgg gttccgaact CD 801 ccatatgggg aaggaacgtt gttgtttgcg aggtctcgat catttacatg CD 851 gacccacttC tcattccatt tgtgggaatt tgatgattta taaaccgtcC CD 901 ccaacgagcg aaaggttcat gtttgaacat gatgaatcac ttcgtgccga CD 951 cctgttgccC ataaactttc ctgcctcata tgagaatgga aaactggaag CD 1001 attttCtgca tcggtggatg aagaatcacg aacataagaa tttcaggttt CD 1051 agcatgttcc cagaaagaag atactttttt tcCattcgag aaacgaggag CD 1101 cacgactgaa gtggctatac atacaaatcC atttacggat ctatatgctt CD 1151 Cgattggaac tggaagttcc agaactggcg gctggtatac caccataatg CD 1201 aaattgcctt ttctttttag tattCggata ggatttctgt tggcttcatC CD 1251 ggggggctcg cgtagtttgt tacgtcaact ccaaaaggat aagttgcatt CD 1301 ggaatCga FT EDITED CDNA CD 1 atggtccaac tacagaactt cttctttttc attacttTca tggtcgtgcT CD 51 cTgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttTccactgg tgcctcttTt tTTaatggta ctataattcc tattcTtatc CD 151 tctttattcT cttttttggt ctatctacat tcaaggaaat tTatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaataggg agaagctcat ccgctagaaa tgctttattt CD 301 TgtttTgttc ccgttcttca tttcTttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttTgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tTggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtTgaaggtt CD 551 ttgggcctgt agctttcccc gctcccccct Tgtcgagtgg tgcttgtttg CD 601 gggccacctg aaatcgggct tgaagctctc gccttaccaa cgagccgact CD 651 gctgatggct gttggtcacg actactacaa aaaagtgaag atgaatcttt CD 701 ctatttcaca tggaggagtg tgcatcttta tgttgggtgt tcttctgtct CD 751 aatacgaata agatacagtt cactcaacga ttgcctttgg gttccgaact CD 801 ccatatgggg aaggaacgtt gttgtttgcg aggtctcgat catttacatg CD 851 gacccacttT tcattccatt tgtgggaatt tgatgattta taaaccgtcT CD 901 ccaacgagcg aaaggttcat gtttgaacat gatgaatcac ttcgtgccga CD 951 cctgttgccT ataaactttc ctgcctcata tgagaatgga aaactggaag CD 1001 attttTtgca tcggtggatg aagaatcacg aacataagaa tttcaggttt CD 1051 agcatgttcc cagaaagaag atactttttt tcTattcgag aaacgaggag CD 1101 cacgactgaa gtggctatac atacaaatcT atttacggat ctatatgctt CD 1151 Tgattggaac tggaagttcc agaactggcg gctggtatac caccataatg CD 1201 aaattgcctt ttctttttag tattTggata ggatttctgt tggcttcatT CD 1251 ggggggctcg cgtagtttgt tacgtcaact ccaaaaggat aagttgcatt CD 1301 ggaatTga SQ SEQUENCE 436 AA; MVQLQNFFFF ITFMVVLCGT AAPVLLKWFV SRDVSTGASF FNGTIIPILI SLFSFLVYLH SRKFIRSMDR AKSGVLVKAS RPILLPDKIG RSSSARNALF CFVPVLHFFI IESMGDLSYL ESFCGLLCLQ FFCTLFSLPR DRSAKRERAL RSKGQTLWPK GNEQQNDKMR CPGHPHIERR VEGFGPVAFP APPLSSGACL GPPEIGLEAL ALPTSRLLMA VGHDYYKKVK MNLSISHGGV CIFMLGVLLS NTNKIQFTQR LPLGSELHMG KERCCLRGLD HLHGPTFHSI CGNLMIYKPS PTSERFMFEH DESLRADLLP INFPASYENG KLEDFLHRWM KNHEHKNFRF SMFPERRYFF SIRETRSTTE VAIHTNLFTD LYALIGTGSS RTGGWYTTIM KLPFLFSIWI GFLLASLGGS RSLLRQLQKD KLHWN* // ID BA000029_47 STANDARD; PRT; 526 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : cox1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC19897.1 FT PROTEIN_NAME : Cytochrome c oxidase subunit1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 338572 - 340147 FT DIRECTIONS : positive FT EDITING : 468 S(tCg) -> L(tTg) FT EDITING : 469 S(tCg) -> L(tTg) FT EDITING : 478 F(ttC) -> F(ttT) FT EDITING : 497 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 1576 NT; CD 1 atgacaaatc tggtccgatg gctcttctcc actaaccaca aggatatcgg CD 51 tactctatat ttcatcttcg gtgccattgc aggagtgatg ggcacatgct CD 101 tctccgtact gattcgtatg gaattagccc gacccggcga tcaaattctt CD 151 ggtgggaatc atcaacttta taatgtttta ataacggctc acgctttttt CD 201 aatgatcttt tttatggtta tgccggcgat gataggtgga tttggtaatt CD 251 ggtttgttcc gattctgata ggtgcacctg acatggcatt tccacgatta CD 301 aataatatat cattctggtt gttgccacca agtctcttgc tcctattaag CD 351 ctcagcctta gtagaagtgg gcagcggcac tgggtggacg gtctatccgc CD 401 ccttaagtgg tattaccagc cattctggag gagcagttga tttagcaatt CD 451 tttagtcttc atctatcagg tgtttcatca attttaggtt ctatcaattt CD 501 tataacaact atcttcaaca tgcgtggacc tggaatgact atgcatagat CD 551 taccactttt tgtgtggtcc gttctagtga cagcattcct acttttatta CD 601 tcacttccgg tactggcagg ggcaattaca atgttattaa ccgatcgaaa CD 651 ctttaataca accttttttg atcctgcagg agggggagac ccaatattat CD 701 accagcatct cttttggttc ttcggtcatc cagaggtgta tattctcatt CD 751 ctgcctggat tcggtattat tagtcatatc gtatcgacct tttcaagaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgata agtataggtg CD 851 ttcttggatt tctagtttgg gctcatcata tgtttactgt gggcttagac CD 901 gttgatacgc gtgcctactt caccgcagct accatgatca tagctgtgcc CD 951 cactggaata aaaatcttta gttggattgc taccatgtgg ggaggttcga CD 1001 tacaatacaa aacacccatg ttatttgctg tagggttcat ctttttgttc CD 1051 accataggag ggctcactgg aattgttcta gcaaactctg ggctagacat CD 1101 tgctctacat gatacttatt atgtggttcg cacatttcca ttatgtactt CD 1151 tctatgggag ccgtttttgc tttatttgct ggattttact attgggtggg CD 1201 taaaatcttt ggtcggacat atcctgaaac tttaggccaa atccattttt CD 1251 ggattacttt tttcggggtt aatctgacct tctttcccat gcatttctta CD 1301 gggctttcgg gcatgccacg tcgcattcca gattatccag atgcttacgc CD 1351 cggatggaat gctctgagca gtttcggttc ttatatatcc gtagttggga CD 1401 ttCgtCgttt cttcgtagtt gtcgcaatca cttCaagcag tggaaagaac CD 1451 aaaagatgtg cggaaagtcc ttgggctgtt gaacagaatC caaccacact CD 1501 agaatggttg gtacaaagcc ctccagcctt tcatactttt ggagaacttc CD 1551 cagctatcaa agagacaaaa agctag FT EDITED CDNA CD 1 atgacaaatc tggtccgatg gctcttctcc actaaccaca aggatatcgg CD 51 tactctatat ttcatcttcg gtgccattgc aggagtgatg ggcacatgct CD 101 tctccgtact gattcgtatg gaattagccc gacccggcga tcaaattctt CD 151 ggtgggaatc atcaacttta taatgtttta ataacggctc acgctttttt CD 201 aatgatcttt tttatggtta tgccggcgat gataggtgga tttggtaatt CD 251 ggtttgttcc gattctgata ggtgcacctg acatggcatt tccacgatta CD 301 aataatatat cattctggtt gttgccacca agtctcttgc tcctattaag CD 351 ctcagcctta gtagaagtgg gcagcggcac tgggtggacg gtctatccgc CD 401 ccttaagtgg tattaccagc cattctggag gagcagttga tttagcaatt CD 451 tttagtcttc atctatcagg tgtttcatca attttaggtt ctatcaattt CD 501 tataacaact atcttcaaca tgcgtggacc tggaatgact atgcatagat CD 551 taccactttt tgtgtggtcc gttctagtga cagcattcct acttttatta CD 601 tcacttccgg tactggcagg ggcaattaca atgttattaa ccgatcgaaa CD 651 ctttaataca accttttttg atcctgcagg agggggagac ccaatattat CD 701 accagcatct cttttggttc ttcggtcatc cagaggtgta tattctcatt CD 751 ctgcctggat tcggtattat tagtcatatc gtatcgacct tttcaagaaa CD 801 accggtcttc gggtatctag gcatggttta tgccatgata agtataggtg CD 851 ttcttggatt tctagtttgg gctcatcata tgtttactgt gggcttagac CD 901 gttgatacgc gtgcctactt caccgcagct accatgatca tagctgtgcc CD 951 cactggaata aaaatcttta gttggattgc taccatgtgg ggaggttcga CD 1001 tacaatacaa aacacccatg ttatttgctg tagggttcat ctttttgttc CD 1051 accataggag ggctcactgg aattgttcta gcaaactctg ggctagacat CD 1101 tgctctacat gatacttatt atgtggttcg cacatttcca ttatgtactt CD 1151 tctatgggag ccgtttttgc tttatttgct ggattttact attgggtggg CD 1201 taaaatcttt ggtcggacat atcctgaaac tttaggccaa atccattttt CD 1251 ggattacttt tttcggggtt aatctgacct tctttcccat gcatttctta CD 1301 gggctttcgg gcatgccacg tcgcattcca gattatccag atgcttacgc CD 1351 cggatggaat gctctgagca gtttcggttc ttatatatcc gtagttggga CD 1401 ttTgtTgttt cttcgtagtt gtcgcaatca cttTaagcag tggaaagaac CD 1451 aaaagatgtg cggaaagtcc ttgggctgtt gaacagaatT caaccacact CD 1501 agaatggttg gtacaaagcc ctccagcctt tcatactttt ggagaacttc CD 1551 cagctatcaa agagacaaaa agctag SQ SEQUENCE 526 AA; MTNLVRWLFS TNHKDIGTLY FIFGAIAGVM GTCFSVLIRM ELARPGDQIL GGNHQLYNVL ITAHAFLMIF FMVMPAMIGG FGNWFVPILI GAPDMAFPRL NNISFWLLPP SLLLLLSSAL VEVGSGTGWT VYPPLSGITS HSGGAVDLAI FSLHLSGVSS ILGSINFITT IFNMRGPGMT MHRLPLFVWS VLVTAFLLLL SLPVLAGAIT MLLTDRNFNT TFFDPAGGGD PILYQHLFWF FGHPEVYILI LPGFGIISHI VSTFSRKPVF GYLGMVYAMI SIGVLGFLVW AHHMFTVGLD VDTRAYFTAA TMIIAVPTGI KIFSWIATMW GGSIQYKTPM LFAVGFIFLF TIGGLTGIVL ANSGLDIALH DTYYVVRTFP LCTFYGSRFC FICWILLLGG *NLWSDIS*N FRPNPFLDYF FRG*SDLLSH AFLRAFGHAT SHSRLSRCLR RMECSEQFRF LYIRSWDLLF LRSCRNHFKQ WKEQKMCGKS LGC*TEFNHT RMVGTKPSSL SYFWRTSSYQ RDKKLX // ID BA000029_49 STANDARD; PRT; 189 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : rpl5 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19898.2 FT PROTEIN_NAME : Ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 342899 - 343465 FT DIRECTIONS : negative FT EDITING : 22 H(Cac) -> Y(Tac) FT CODON_START : 1 CL CDNALEN 567 NT; CD 1 atgtttccac tccattttca ttacgaagat gtattacgtc aggatctgtt CD 51 gctcaaactg aatCacgcca atgttatgga agttcctgga ttgtttgaaa CD 101 tcagattagt accaaaagct gcctctgatt ttaaaatcca atttggaaaa CD 151 ttggctatgg agattttgtg cggtcagaga ttcatacaga cacaaagggg CD 201 cccttatttt aaagcaggaa agtcgtttcg atccaatcca ttcttggggt CD 251 ccgaaaaaga cactggatat gtcagtgact ttgcacgaca aagcgttctc CD 301 cgagggcatg gaatgtacca ttttttggtc agaatcttga cagtaatgtc CD 351 tatgttagat tctccggtcg aaatatggga aaactccatc aaattcttta CD 401 tggaaacgga gttttgcgaa ttctccccgg aactggaaga tcatttcgag CD 451 atcttcgagc atattcgagg gttcaatgtg actattgtca cttcggccaa CD 501 tacaaaagat gagactttac tactgtggag cggctttttg ctaaaagatg CD 551 agggggaaac taagtaa FT EDITED CDNA CD 1 atgtttccac tccattttca ttacgaagat gtattacgtc aggatctgtt CD 51 gctcaaactg aatTacgcca atgttatgga agttcctgga ttgtttgaaa CD 101 tcagattagt accaaaagct gcctctgatt ttaaaatcca atttggaaaa CD 151 ttggctatgg agattttgtg cggtcagaga ttcatacaga cacaaagggg CD 201 cccttatttt aaagcaggaa agtcgtttcg atccaatcca ttcttggggt CD 251 ccgaaaaaga cactggatat gtcagtgact ttgcacgaca aagcgttctc CD 301 cgagggcatg gaatgtacca ttttttggtc agaatcttga cagtaatgtc CD 351 tatgttagat tctccggtcg aaatatggga aaactccatc aaattcttta CD 401 tggaaacgga gttttgcgaa ttctccccgg aactggaaga tcatttcgag CD 451 atcttcgagc atattcgagg gttcaatgtg actattgtca cttcggccaa CD 501 tacaaaagat gagactttac tactgtggag cggctttttg ctaaaagatg CD 551 agggggaaac taagtaa SQ SEQUENCE 189 AA; MFPLHFHYED VLRQDLLLKL NYANVMEVPG LFEIRLVPKA ASDFKIQFGK LAMEILCGQR FIQTQRGPYF KAGKSFRSNP FLGSEKDTGY VSDFARQSVL RGHGMYHFLV RILTVMSMLD SPVEIWENSI KFFMETEFCE FSPELEDHFE IFEHIRGFNV TIVTSANTKD ETLLLWSGFL LKDEGETK* // ID BA000029_50 STANDARD; PRT; 510 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : atp1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19899.2 FT PROTEIN_NAME : ATP synthase F0 subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 352379 - 353908 FT DIRECTIONS : positive FT EDITING : 10 L(ctC) -> L(ctT) FT EDITING : 393 S(tCa) -> L(tTa) FT EDITING : 431 P(Ccc) -> S(Tcc) FT EDITING : 497 P(cCt) -> L(cTt) FT EDITING : 500 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 1530 NT; CD 1 atggaattct cacccagagc tgcggaactC acgactctat tagaaagtag CD 51 aatgaccaac ttttacacga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacgtgttt atggattgaa cgagattcaa CD 151 gctggagaaa tggtggaatt tgccagcggt gtgaaaggaa tagccttgaa CD 201 tcttgagaat gagaatgtag gtattgttgt ctttggtagt gataccgcta CD 251 ttaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gcgggaaagg ccatgttagg ccgtgtggtc gacgccttgg gagtacctat CD 351 tgatggaaaa ggggctctaa gcgatcacga acgaagacgt gtcgaagtga CD 401 aagccccagg gattattgaa cgtaaatctg tgcacgaacc catgcaaaca CD 451 ggcttaaaag cagtggatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttataatc ggggacagac aaactggaaa aacagcaata gctatcgata CD 551 ctatattaaa ccaaaagcaa atgaactcaa ggggcacaaa tgagagtgag CD 601 acattgtatt gtgtctatgt tgcgattgga caaaaacgct cgactgtggc CD 651 acaattagtt caaattcttt cagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctctgcaatt tctggcccca CD 751 tattcagggt gtgccatggg ggaatatttc cgcgataatg gaatgcacgc CD 801 attaattata tatgatgatc taagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggggat CD 901 gttttctatt tacattcccg tctcttagaa agagccgcta aacgatcgga CD 951 ccagacaggt gcaggtagct tgactgcgtt acccgtgatt gaaacacaag CD 1001 ctggagacgt atcggcctat atccccacca atgtgatctc cattacagat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtt ggcttatccg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtctgc ggtagttCaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgccttcgc tcaatttggg tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct tacagaagtg Cccaaacaac CD 1301 cacaatatga accacttcca attgaaaaac aaattgttgt gatttatgct CD 1351 gctgtcaacg gcttctgtga tcgaatgcca ctagacagaa tttctcaata CD 1401 tgaaaaagcc attctaagta ctattaatcc agaattacta aaatccttca CD 1451 acgaaaaagg gggattaact aacgaaagaa agattgaacC tgatgcttCt CD 1501 ttaaaacaaa ctgcgaagga gattaattag FT EDITED CDNA CD 1 atggaattct cacccagagc tgcggaactT acgactctat tagaaagtag CD 51 aatgaccaac ttttacacga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacgtgttt atggattgaa cgagattcaa CD 151 gctggagaaa tggtggaatt tgccagcggt gtgaaaggaa tagccttgaa CD 201 tcttgagaat gagaatgtag gtattgttgt ctttggtagt gataccgcta CD 251 ttaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gcgggaaagg ccatgttagg ccgtgtggtc gacgccttgg gagtacctat CD 351 tgatggaaaa ggggctctaa gcgatcacga acgaagacgt gtcgaagtga CD 401 aagccccagg gattattgaa cgtaaatctg tgcacgaacc catgcaaaca CD 451 ggcttaaaag cagtggatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttataatc ggggacagac aaactggaaa aacagcaata gctatcgata CD 551 ctatattaaa ccaaaagcaa atgaactcaa ggggcacaaa tgagagtgag CD 601 acattgtatt gtgtctatgt tgcgattgga caaaaacgct cgactgtggc CD 651 acaattagtt caaattcttt cagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctctgcaatt tctggcccca CD 751 tattcagggt gtgccatggg ggaatatttc cgcgataatg gaatgcacgc CD 801 attaattata tatgatgatc taagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggggat CD 901 gttttctatt tacattcccg tctcttagaa agagccgcta aacgatcgga CD 951 ccagacaggt gcaggtagct tgactgcgtt acccgtgatt gaaacacaag CD 1001 ctggagacgt atcggcctat atccccacca atgtgatctc cattacagat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtt ggcttatccg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtctgc ggtagttTaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgccttcgc tcaatttggg tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct tacagaagtg Tccaaacaac CD 1301 cacaatatga accacttcca attgaaaaac aaattgttgt gatttatgct CD 1351 gctgtcaacg gcttctgtga tcgaatgcca ctagacagaa tttctcaata CD 1401 tgaaaaagcc attctaagta ctattaatcc agaattacta aaatccttca CD 1451 acgaaaaagg gggattaact aacgaaagaa agattgaacT tgatgcttTt CD 1501 ttaaaacaaa ctgcgaagga gattaattag SQ SEQUENCE 510 AA; MEFSPRAAEL TTLLESRMTN FYTNFQVDEI GRVVSVGDGI ARVYGLNEIQ AGEMVEFASG VKGIALNLEN ENVGIVVFGS DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DALGVPIDGK GALSDHERRR VEVKAPGIIE RKSVHEPMQT GLKAVDSLVP IGRGQRELII GDRQTGKTAI AIDTILNQKQ MNSRGTNESE TLYCVYVAIG QKRSTVAQLV QILSEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSLKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV SKQPQYEPLP IEKQIVVIYA AVNGFCDRMP LDRISQYEKA ILSTINPELL KSFNEKGGLT NERKIELDAF LKQTAKEIN* // ID BA000029_51 STANDARD; PRT; 191 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : nad9 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19900.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 361793 - 362365 FT DIRECTIONS : positive FT EDITING : 31 S(tCt) -> F(tTt) FT EDITING : 38 P(cCa) -> L(cTa) FT EDITING : 56 S(tCg) -> L(tTg) FT EDITING : 64 H(Cat) -> Y(Tat) FT EDITING : 75 H(Cat) -> Y(Tat) FT EDITING : 100 P(Ccg) -> S(Tcg) FT EDITING : 104 P(cCa) -> L(cTa) FT EDITING : 110 R(Cgg) -> W(Tgg) FT EDITING : 119 S(tCt) -> F(tTt) FT EDITING : 123 S(tCc) -> F(tTc) FT EDITING : 133 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 573 NT; CD 1 atggataacc aatccatttt ccaatatagt tgggagattt tacccaagaa CD 51 atgggtacat aaaatgaaaa gatcggaaca tgggaataga tCttatacca CD 101 atactgacta ccCatttcca ttgttgtgct ttctaaaatg gcatacctat CD 151 acaagggttc aagtttCgat cgatatttgc ggagtggatC atccctctcg CD 201 aaaacgaaga tttgaagttg tcCataattt actgagtact cggtataact CD 251 cacgcattcg tgtacaaaca agtgcagacg aagtaacacg aatatctCcg CD 301 gtagtcagtc Catttccatc agccggcCgg tgggagcgag aagtatggga CD 351 tatgtCtggt gtttcttCca tcaatcatcc ggatttacgc cgtatatCaa CD 401 cagattatgg tttcgagggt catccattac gaaaagactt tcctctgagt CD 451 ggatatgtgg aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 acccattgag atgacccaag aatttcgcta tttcgatttt gctagtcctt CD 551 gggaacagcg tagcgacgga taa FT EDITED CDNA CD 1 atggataacc aatccatttt ccaatatagt tgggagattt tacccaagaa CD 51 atgggtacat aaaatgaaaa gatcggaaca tgggaataga tTttatacca CD 101 atactgacta ccTatttcca ttgttgtgct ttctaaaatg gcatacctat CD 151 acaagggttc aagtttTgat cgatatttgc ggagtggatT atccctctcg CD 201 aaaacgaaga tttgaagttg tcTataattt actgagtact cggtataact CD 251 cacgcattcg tgtacaaaca agtgcagacg aagtaacacg aatatctTcg CD 301 gtagtcagtc Tatttccatc agccggcTgg tgggagcgag aagtatggga CD 351 tatgtTtggt gtttcttTca tcaatcatcc ggatttacgc cgtatatTaa CD 401 cagattatgg tttcgagggt catccattac gaaaagactt tcctctgagt CD 451 ggatatgtgg aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 acccattgag atgacccaag aatttcgcta tttcgatttt gctagtcctt CD 551 gggaacagcg tagcgacgga taa SQ SEQUENCE 191 AA; MDNQSIFQYS WEILPKKWVH KMKRSEHGNR FYTNTDYLFP LLCFLKWHTY TRVQVLIDIC GVDYPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISS VVSLFPSAGW WEREVWDMFG VSFINHPDLR RILTDYGFEG HPLRKDFPLS GYVEVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG * // ID BA000029_52 STANDARD; PRT; 489 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAC19905.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 54/2 FT INTRON 245/1 FT INTRON 308/1 FT INTRON 359/1 FT EDITING : 26 H(Cac) -> Y(Tac) FT EDITING : 81 F(ttC) -> F(ttT) FT EDITING : 85 V(gtC) -> V(gtT) FT EDITING : 88 F(ttC) -> F(ttT) FT EDITING : 125 T(acC) -> T(acT) FT EDITING : 128 S(tCa) -> L(tTa) FT EDITING : 138 S(tCg) -> L(tTg) FT EDITING : 139 Y(taC) -> Y(taT) FT EDITING : 161 I(atC) -> I(atT) FT EDITING : 171 S(tcC) -> S(tcT) FT EDITING : 201 Y(taC) -> Y(taT) FT EDITING : 234 P(cCC) -> L(cTT) FT CODON_START : 1 CL CDNALEN 1467 NT; CD 1 ttgttccatg atctatgggt ctactggagc tacccacttc gatcaattag CD 51 ccaagatttt gaccggatac gaaatCactg gtgctcaatc tagtggtatt CD 101 tttatgggga ttctttttat cgctgtagga ttcctattca agattactgc CD 151 agttcctttt catatgtggg cacctgatat ctatgagggt tcacccaccc CD 201 cggtgacagc attcctttct attgcgccta aaatctctat ttCtgcaaat CD 251 atgtCacgtg tttCtattgt tgcttcctat gggggtacat tacaacaaat CD 301 cttctttttc tgcagcattg cttctatgat cttaggagca ctggccgcca CD 351 tggcccaaac gaaagtcaaa agacCtctag ctCatagttc gattggacat CD 401 gtaggttata ttCgtaCtgg tttctcatgt ggaaccatag aaggaattca CD 451 atcactacta attggtatat ttatttatgc atCaatgacg atagatgcat CD 501 tcgccatagt tcCagcatta cggcaaaccc gtgtcaaata tatagcggat CD 551 ttgggcgctc tagccaaaac gaatcctatt ttggctatga ccttctccat CD 601 taCaatgttc tcatacgcag gaataccccc gttagccggc ttttgtagca CD 651 aattctattt gttcttcgcc gctttgggtt gtggggctta cttcctagcc CD 701 CCagtgggag tagtgactag cgttataggt tgtttttatt atatacgctt CD 751 agtgaaaaga atgttttttg atagacctag gacatggatt ctatatgaac CD 801 caatggatcg tgacaagtcg ttactactag caatgacttc ctctttcatt CD 851 acttcatcct ttccatatcc ctctcccttg ttcgatctta ctcatcaaat CD 901 ggcactcagt tcatatctgt aaatgttcaa tcttttttta gcggtttccc CD 951 cagagatctt tatcattaac gcaaccttca ttttgctcat tcatggagtt CD 1001 gtatttagta cctctaagaa agatgattat ccaccgttag ttagtaatgt CD 1051 gggttggctt ggattactta gtgttctaat aaccttgctt ctgctcgccg CD 1101 ctggcgcacc tctcctaact attgcccatt tattctggaa taattttttt CD 1151 aggagggaca attttacata tttctgccaa atccttctat tattaagtac CD 1201 ggctggtacc atttcgatgt gtttcgattc tttcgaaaaa gagaggtttg CD 1251 atgcttctga attcattgta ttaattccac ttcctactcg cagtatgctc CD 1301 ttaatgatcc cggctcatga tttaattgcc atgtatttag ctattgagct CD 1351 tcaaagttta tgtttttatg tgatcgcagc atcaaaaaga aagtctgaat CD 1401 tttccacgga agccggctca aaatatttga tcttaggtgc atttccctct CD 1451 ggaatattat tgttcgg FT EDITED CDNA CD 1 ttgttccatg atctatgggt ctactggagc tacccacttc gatcaattag CD 51 ccaagatttt gaccggatac gaaatTactg gtgctcaatc tagtggtatt CD 101 tttatgggga ttctttttat cgctgtagga ttcctattca agattactgc CD 151 agttcctttt catatgtggg cacctgatat ctatgagggt tcacccaccc CD 201 cggtgacagc attcctttct attgcgccta aaatctctat ttTtgcaaat CD 251 atgtTacgtg tttTtattgt tgcttcctat gggggtacat tacaacaaat CD 301 cttctttttc tgcagcattg cttctatgat cttaggagca ctggccgcca CD 351 tggcccaaac gaaagtcaaa agacTtctag ctTatagttc gattggacat CD 401 gtaggttata ttTgtaTtgg tttctcatgt ggaaccatag aaggaattca CD 451 atcactacta attggtatat ttatttatgc atTaatgacg atagatgcat CD 501 tcgccatagt tcTagcatta cggcaaaccc gtgtcaaata tatagcggat CD 551 ttgggcgctc tagccaaaac gaatcctatt ttggctatga ccttctccat CD 601 taTaatgttc tcatacgcag gaataccccc gttagccggc ttttgtagca CD 651 aattctattt gttcttcgcc gctttgggtt gtggggctta cttcctagcc CD 701 TTagtgggag tagtgactag cgttataggt tgtttttatt atatacgctt CD 751 agtgaaaaga atgttttttg atagacctag gacatggatt ctatatgaac CD 801 caatggatcg tgacaagtcg ttactactag caatgacttc ctctttcatt CD 851 acttcatcct ttccatatcc ctctcccttg ttcgatctta ctcatcaaat CD 901 ggcactcagt tcatatctgt aaatgttcaa tcttttttta gcggtttccc CD 951 cagagatctt tatcattaac gcaaccttca ttttgctcat tcatggagtt CD 1001 gtatttagta cctctaagaa agatgattat ccaccgttag ttagtaatgt CD 1051 gggttggctt ggattactta gtgttctaat aaccttgctt ctgctcgccg CD 1101 ctggcgcacc tctcctaact attgcccatt tattctggaa taattttttt CD 1151 aggagggaca attttacata tttctgccaa atccttctat tattaagtac CD 1201 ggctggtacc atttcgatgt gtttcgattc tttcgaaaaa gagaggtttg CD 1251 atgcttctga attcattgta ttaattccac ttcctactcg cagtatgctc CD 1301 ttaatgatcc cggctcatga tttaattgcc atgtatttag ctattgagct CD 1351 tcaaagttta tgtttttatg tgatcgcagc atcaaaaaga aagtctgaat CD 1401 tttccacgga agccggctca aaatatttga tcttaggtgc atttccctct CD 1451 ggaatattat tgttcgg SQ SEQUENCE 489 AA; LFHDLWVYWS YPLRSISQDF DRIRNYWCSI *WYFYGDSFY RCRIPIQDYC SSFSYVGT*Y L*GFTHPGDS IPFYCA*NLY FCKYVTCFYC CFLWGYITTN LLFLQHCFYD LRSTGRHGPN ESQKTSSL*F DWTCRLYLYW FLMWNHRRNS ITTNWYIYLC INDDRCIRHS SSITANPCQI YSGFGRSSQN ESYFGYDLLH YNVLIRRNTP VSRLL*QILF VLRRFGLWGL LPSLSGSSD* RYRLFLLYTL SEKNVF**T* DMDSI*TNGS *QVVTTSNDF LFHYFILSIS LSLVRSYSSN GTQFISVNVQ SFFSGFPRDL YH*RNLHFAH SWSCI*YL*E R*LSTVS**C GLAWIT*CSN NLASARRWRT SPNYCPFILE *FF*EGQFYI FLPNPSIIKY GWYHFDVFRF FRKREV*CF* IHCINSTSYS QYALNDPGS* FNCHVFSY*A SKFMFLCDRS IKKKV*IFHG SRLKIFDLRC ISLWNIIVR // ID BA000029_55 STANDARD; PRT; 207 AA. AC BA000029; DT Tue Jul 21 07:04:07 2009 DE Oryza sativa Japonica Group mitochondrial DNA, complete genome. OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : ccmB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAC19903.2 FT PROTEIN_NAME : Cytochrome c biogenesis B FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 391755 - 392375 FT DIRECTIONS : positive FT EDITING : 10 H(Cat) -> Y(Tat) FT EDITING : 15 P(Ccc) -> S(Tcc) FT EDITING : 27 S(tCg) -> L(tTg) FT EDITING : 29 I(atC) -> I(atT) FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 45 H(Cat) -> Y(Tat) FT EDITING : 46 S(tCc) -> F(tTc) FT EDITING : 50 S(tCg) -> L(tTg) FT EDITING : 52 R(Cgg) -> W(Tgg) FT EDITING : 53 I(atC) -> I(atT) FT EDITING : 58 P(Ccc) -> S(Tcc) FT EDITING : 60 P(cCt) -> L(cTt) FT EDITING : 61 P(Ccc) -> S(Tcc) FT EDITING : 65 S(tCt) -> F(tTt) FT EDITING : 71 S(tCt) -> F(tTt) FT EDITING : 96 R(Cgg) -> W(Tgg) FT EDITING : 102 R(Cgt) -> C(Tgt) FT EDITING : 113 P(cCg) -> L(cTg) FT EDITING : 123 R(Cgg) -> W(Tgg) FT EDITING : 131 P(cCg) -> L(cTg) FT EDITING : 143 S(tCg) -> L(tTg) FT EDITING : 156 S(tCg) -> L(tTg) FT EDITING : 159 P(CCa) -> L(TTa) FT EDITING : 162 S(tCa) -> L(tTa) FT EDITING : 168 P(cCa) -> L(cTa) FT EDITING : 171 S(tCc) -> F(tTc) FT EDITING : 172 R(Cgt) -> C(Tgt) FT EDITING : 184 S(tCa) -> L(tTa) FT EDITING : 185 S(tCg) -> L(tTg) FT EDITING : 189 S(tCc) -> F(tTc) FT EDITING : 190 S(tCt) -> F(tTt) FT EDITING : 191 P(cCt) -> L(cTt) FT EDITING : 199 S(tCg) -> L(tTg) FT EDITING : 204 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 621 NT; CD 1 atgagacgac tctttcttga acaatttCat aagcagatct tcCcctccac CD 51 accaatcacg agtttttttt tattcctctC gtatatCgtc gtcacgccct CD 101 taatgatagg ttttgaaaaa gatttttCat gtCattCcca tttaggttCg CD 151 attCggatCc ctctgttgtt tCcctttcCt Cccgaacctt tttCtcgaaa CD 201 tgataaagaa tCtggtacac tcgaattgta ttatttaagt gcttattgct CD 251 tgccaaaaat cctacttcta caattggtag gtcacCgggt tattcaaata CD 301 agtCgtgttt tctgtgcttt tcccatgtta caacttcCgt accaattcga CD 351 tcgatccgga atggatCggt taaacattct attagggagc cCggtcttga CD 401 ctcttctgtg tggtattcat tctggttCgg ctcttggaat cacatccagc CD 451 agtggttgga acagctCgca aaatCCaacc acttCaccta ctttattgcc CD 501 ccCaaccgtt tCcCgtacct ctatagaaac agaagggttt catgttcttt CD 551 CatCgattgg gtattCctCt cCttttgtat ctctttatcc aatttCggtc CD 601 tcgattagtt Cacaagattg a FT EDITED CDNA CD 1 atgagacgac tctttcttga acaatttTat aagcagatct tcTcctccac CD 51 accaatcacg agtttttttt tattcctctT gtatatTgtc gtcacgccct CD 101 taatgatagg ttttgaaaaa gatttttTat gtTattTcca tttaggttTg CD 151 attTggatTc ctctgttgtt tTcctttcTt Tccgaacctt tttTtcgaaa CD 201 tgataaagaa tTtggtacac tcgaattgta ttatttaagt gcttattgct CD 251 tgccaaaaat cctacttcta caattggtag gtcacTgggt tattcaaata CD 301 agtTgtgttt tctgtgcttt tcccatgtta caacttcTgt accaattcga CD 351 tcgatccgga atggatTggt taaacattct attagggagc cTggtcttga CD 401 ctcttctgtg tggtattcat tctggttTgg ctcttggaat cacatccagc CD 451 agtggttgga acagctTgca aaatTTaacc acttTaccta ctttattgcc CD 501 ccTaaccgtt tTcTgtacct ctatagaaac agaagggttt catgttcttt CD 551 TatTgattgg gtattTctTt cTttttgtat ctctttatcc aatttTggtc CD 601 tcgattagtt Tacaagattg a SQ SEQUENCE 207 AA; MRRLFLEQFY KQIFSSTPIT SFFLFLLYIV VTPLMIGFEK DFLCYFHLGL IWIPLLFSFL SEPFFRNDKE FGTLELYYLS AYCLPKILLL QLVGHWVIQI SCVFCAFPML QLLYQFDRSG MDWLNILLGS LVLTLLCGIH SGLALGITSS SGWNSLQNLT TLPTLLPLTV FCTSIETEGF HVLLLIGYFF LFVSLYPILV SISLQD* // ID BA000042_48 STANDARD; PRT; 121 AA. AC BA000042; DT Tue Jul 21 07:04:08 2009 DE Nicotiana tabacum mitochondrial DNA, complete genome. OS mitochondrion Nicotiana tabacum (common tobacco) OC Nicotiana tabacum RN [1] RL Mol. Genet. Genomics 272 (6), 603-615 (2005) RL PUBMED 15583938 FT Full length CDS FT GENE : rps10 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAD83460.1 FT PROTEIN_NAME : ribosomal protein S10 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 84/1 FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 363 NT; CD 1 aCgaccacca agataggcat agtaattcga tcttttgatc acccattttt CD 51 tgaaaaccat ttttgggggc ttccgcctta cacacggaag attggattgc CD 101 ctgaatcacg agtcttatat actgtgttac gatcacctca tattgataaa CD 151 aagtccagag aacaatttta tatgaaaata aagaaagaat ttctggtcat CD 201 aaaaacagaa aggcatgaat tgcgcaagaa gttctttcgg ttaaaacgcc CD 251 agcgtatatt tggagctcaa tatgaaatcc tattttcttg caagacccgt CD 301 tcggataagg gaaaactcca gagattgctt cgaaataaga tccttgcgtt CD 351 gaccctttcc tga FT EDITED CDNA CD 1 aTgaccacca agataggcat agtaattcga tcttttgatc acccattttt CD 51 tgaaaaccat ttttgggggc ttccgcctta cacacggaag attggattgc CD 101 ctgaatcacg agtcttatat actgtgttac gatcacctca tattgataaa CD 151 aagtccagag aacaatttta tatgaaaata aagaaagaat ttctggtcat CD 201 aaaaacagaa aggcatgaat tgcgcaagaa gttctttcgg ttaaaacgcc CD 251 agcgtatatt tggagctcaa tatgaaatcc tattttcttg caagacccgt CD 301 tcggataagg gaaaactcca gagattgctt cgaaataaga tccttgcgtt CD 351 gaccctttcc tga SQ SEQUENCE 121 AA; MTTKIGIVIR SFDHPFFENH FWGLPPYTRK IGLPESRVLY TVLRSPHIDK KSREQFYMKI KKEFLVIKTE RHELRKKFFR LKRQRIFGAQ YEILFSCKTR SDKGKLQRLL RNKILALTLS * // ID BNAMTNAD3_1 STANDARD; PRT; 119 AA. AC D13697; DT Tue Jul 21 07:05:09 2009 DE Brassica napus mitochondrial nad3, rps12 and ccb206 genes for NADH OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Curr. Genet. 34 (4), 318-325 (1998) RL PUBMED 9799366 FT Full length CDS FT GENE : nad3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA02856.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 277 - 633 FT DIRECTIONS : positive FT EDITING : 2 S(tCa) -> L(tTa) FT EDITING : 8 S(tCt) -> F(tTt) FT EDITING : 27 P(cCa) -> L(cTa) FT EDITING : 49 S(tCc) -> F(tTc) FT EDITING : 70 P(CCt) -> F(TTt) FT EDITING : 83 P(Cct) -> S(Tct) FT EDITING : 84 P(cCc) -> L(cTc) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 117 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 atgtCagaat ttgcaccaat ttCtatctat ttagtgatta gtctgctagt CD 51 ttctttgatc ctactcggtg ttccttttcC atttgcttcc aatagttcta CD 101 cctacccaga aaaattgtcg gcctacgaat gtggtttcga tccttCcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatcttgttt caattttatt CD 201 tttaatcCCt gatctggaag tcaccttttt ctttccttgg gcagtaCctc CD 251 Ccaacaagat tgatttgttt ggattttggt ccatgatggc ctttttattt CD 301 attttgacga ttggatttct ctatgaatgg aaaaggggtg cttCggatCg CD 351 ggagtaa FT EDITED CDNA CD 1 atgtTagaat ttgcaccaat ttTtatctat ttagtgatta gtctgctagt CD 51 ttctttgatc ctactcggtg ttccttttcT atttgcttcc aatagttcta CD 101 cctacccaga aaaattgtcg gcctacgaat gtggtttcga tccttTcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatcttgttt caattttatt CD 201 tttaatcTTt gatctggaag tcaccttttt ctttccttgg gcagtaTctc CD 251 Tcaacaagat tgatttgttt ggattttggt ccatgatggc ctttttattt CD 301 attttgacga ttggatttct ctatgaatgg aaaaggggtg cttTggatTg CD 351 ggagtaa SQ SEQUENCE 119 AA; MLEFAPIFIY LVISLLVSLI LLGVPFLFAS NSSTYPEKLS AYECGFDPFG DARSRFDIRF YLVSILFLIF DLEVTFFFPW AVSLNKIDLF GFWSMMAFLF ILTIGFLYEW KRGALDWE* // ID BNAMTNAD3_2 STANDARD; PRT; 126 AA. AC D13697; DT Tue Jul 21 07:05:09 2009 DE Brassica napus mitochondrial nad3, rps12 and ccb206 genes for NADH OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Curr. Genet. 34 (4), 318-325 (1998) RL PUBMED 9799366 FT Full length CDS FT GENE : rps12 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA02857.1 FT PROTEIN_NAME : ribosomal protein S12 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 681 - 1058 FT DIRECTIONS : positive FT EDITING : 35 P(cCg) -> L(cTg) FT EDITING : 49 P(cCa) -> L(cTa) FT EDITING : 66 H(Cac) -> Y(Tac) FT EDITING : 74 S(tCg) -> L(tTg) FT EDITING : 90 S(tCg) -> L(tTg) FT EDITING : 95 S(tCC) -> F(tTT) FT CODON_START : 1 CL CDNALEN 378 NT; CD 1 atgcctacgt ttaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt tggataaatg tccccagaag ctaggagcat CD 101 gccCgcgtgt ttcaacgaga acaccgaaaa aaccgaattc cgctcCacgt CD 151 aagatagcca aagtacggtt gagcaatcga catgatatat ttgctCacat CD 201 tccgggcgaa ggtcataatt Cgcaggaaca ttcgcaggtg ttaataagag CD 251 gaggtagagt gaaagattCg ccaggtgtaa aatCCcattg tattcgagga CD 301 gtaaaggatt tgatgggaat tccgggtcga agaagaggca gatcaaaata CD 351 tggtgcagaa aaacccaaat cgatatga FT EDITED CDNA CD 1 atgcctacgt ttaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt tggataaatg tccccagaag ctaggagcat CD 101 gccTgcgtgt ttcaacgaga acaccgaaaa aaccgaattc cgctcTacgt CD 151 aagatagcca aagtacggtt gagcaatcga catgatatat ttgctTacat CD 201 tccgggcgaa ggtcataatt Tgcaggaaca ttcgcaggtg ttaataagag CD 251 gaggtagagt gaaagattTg ccaggtgtaa aatTTcattg tattcgagga CD 301 gtaaaggatt tgatgggaat tccgggtcga agaagaggca gatcaaaata CD 351 tggtgcagaa aaacccaaat cgatatga SQ SEQUENCE 126 AA; MPTFNQLIRH GREEKRRTDR TRALDKCPQK LGACLRVSTR TPKKPNSALR KIAKVRLSNR HDIFAYIPGE GHNLQEHSQV LIRGGRVKDL PGVKFHCIRG VKDLMGIPGR RRGRSKYGAE KPKSI* // ID BNAMTNAD3_3 STANDARD; PRT; 207 AA. AC D13697; DT Tue Jul 21 07:05:09 2009 DE Brassica napus mitochondrial nad3, rps12 and ccb206 genes for NADH OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Curr. Genet. 34 (4), 318-325 (1998) RL PUBMED 9799366 FT Full length CDS FT GENE : ccb206 FT NOTE : HelB-homologue protein involved in cytochrome c FT LOCUS_TAG : FT PROTEIN_ID : BAA32558.1 FT PROTEIN_NAME : HelB-homologue protein FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1250 - 1870 FT DIRECTIONS : positive FT EDITING : 6 L(Ctt) -> F(Ttt) FT EDITING : 10 H(Cat) -> Y(Tat) FT EDITING : 15 P(Ccc) -> S(Tcc) FT EDITING : 24 P(cCa) -> L(cTa) FT EDITING : 27 S(tCg) -> L(tTg) FT EDITING : 29 I(atC) -> I(atT) FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 46 S(tCc) -> F(tTc) FT EDITING : 50 P(CCg) -> L(TTg) FT EDITING : 52 R(Cgg) -> W(Tgg) FT EDITING : 53 I(atC) -> I(atT) FT EDITING : 54 P(Cct) -> S(Tct) FT EDITING : 55 P(cCg) -> L(cTg) FT EDITING : 58 P(Cct) -> S(Tct) FT EDITING : 60 P(CCt) -> F(TTt) FT EDITING : 61 P(Ccc) -> S(Tcc) FT EDITING : 65 P(CCt) -> F(TTt) FT EDITING : 96 R(Cgg) -> W(Tgg) FT EDITING : 102 R(Cgt) -> C(Tgt) FT EDITING : 113 S(tCg) -> L(tTg) FT EDITING : 123 R(Cgg) -> W(Tgg) FT EDITING : 127 P(CCa) -> L(TTa) FT EDITING : 142 R(Cgt) -> C(Tgt) FT EDITING : 143 S(tCg) -> L(tTg) FT EDITING : 156 S(tCg) -> L(tTg) FT EDITING : 159 P(CCa) -> L(TTa) FT EDITING : 162 S(tCa) -> L(tTa) FT EDITING : 171 S(tCt) -> F(tTt) FT EDITING : 172 R(Cgt) -> C(Tgt) FT EDITING : 184 S(tCa) -> L(tTa) FT EDITING : 185 S(tCg) -> L(tTg) FT EDITING : 189 S(tCc) -> F(tTc) FT EDITING : 190 S(tCt) -> F(tTt) FT EDITING : 199 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 621 NT; CD 1 atgagacgac tttttCttga actatatCat aaactgatct tcCcctccac CD 51 accaatcacg agtttttctc CattcctctC gtatatCgtc gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttCat gtcattCcca tttaggtCCg CD 151 attCggatCC ctcCgttgtt tCcttttCCt Cccgcacctt ttCCtcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt acttattgct CD 251 tgccaaagat cctacttcta caattggtgg gtcacCgggt tattcaaata CD 301 agtCgtgttt tctgtggttt tcccatgtta caactttCgt accaattcgg CD 351 tcgatccgga atggatCggt taaacattCC attagggagc ctggtcttga CD 401 ctcttctgtg tggtattcat tctCgttCgg ctcttggaat cacatccagc CD 451 agtggttgga acagctCgca aaatCCaacc acttCaccta ctttattgcc CD 501 cctaaccgtt tCtCgtacct ctattgaaac agaatggttt catgttcttt CD 551 CatCgattgg ttattCctCt ctgttcgtat ctctttttcc aatttCggtc CD 601 tcgattagtt tacaagatta a FT EDITED CDNA CD 1 atgagacgac tttttTttga actatatTat aaactgatct tcTcctccac CD 51 accaatcacg agtttttctc TattcctctT gtatatTgtc gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttTat gtcattTcca tttaggtTTg CD 151 attTggatTT ctcTgttgtt tTcttttTTt Tccgcacctt ttTTtcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt acttattgct CD 251 tgccaaagat cctacttcta caattggtgg gtcacTgggt tattcaaata CD 301 agtTgtgttt tctgtggttt tcccatgtta caactttTgt accaattcgg CD 351 tcgatccgga atggatTggt taaacattTT attagggagc ctggtcttga CD 401 ctcttctgtg tggtattcat tctTgttTgg ctcttggaat cacatccagc CD 451 agtggttgga acagctTgca aaatTTaacc acttTaccta ctttattgcc CD 501 cctaaccgtt tTtTgtacct ctattgaaac agaatggttt catgttcttt CD 551 TatTgattgg ttattTctTt ctgttcgtat ctctttttcc aatttTggtc CD 601 tcgattagtt tacaagatta a SQ SEQUENCE 207 AA; MRRLFFELYY KLIFSSTPIT SFSLFLLYIV VTPLMLGFEK DFLCHFHLGL IWISLLFSFF SAPFFRNEKE DGTLELYYLS TYCLPKILLL QLVGHWVIQI SCVFCGFPML QLLYQFGRSG MDWLNILLGS LVLTLLCGIH SCLALGITSS SGWNSLQNLT TLPTLLPLTV FCTSIETEWF HVLLLIGYFF LFVSLFPILV SISLQD* // ID D78336_1 STANDARD; PRT; 503 AA. AC D78336; DT Tue Jul 21 07:05:09 2009 DE Oryza sativa Japonica Group mitochondrial gene for ribosomal OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Plant Mol. Biol. 31 (4), 853-862 (1996) RL PUBMED 8806415 FT Full length CDS FT GENE : FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA11350.2 FT PROTEIN_NAME : ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 281/0 FT EDITING : 404 P(Cca) -> S(Tca) FT CODON_START : 1 CL CDNALEN 1509 NT; CD 1 atgagacaaa gcataaaggg gagagcgctt agacatttca ctttgagtac CD 51 ggggaagtcc gcagggagga attcttccgg gcgtattact gtttttcacc CD 101 gagggggtgg atcgaagcga ttgcagcgaa aaattgacct taaacgaagc CD 151 acttcgtcta ttggcattgt ggaaaggatc gaatatgacc ctaatcgttc CD 201 ttctcggatc gctctagtac gatggatcga aggggtgctg cccggccgcc CD 251 agaggaaatt caagacgata gaagagttcg ctctgccgcg taagatcctc CD 301 gaatccacca cggccactat cttttgcctt ttttcgttct cttccctgtc CD 351 ctctcccttg gcccagggag agactgcatc cctttccttc ggcagctctt CD 401 taggtttccc aaggatagcg gtagctgggg caaagcccgc tttcttcgcg CD 451 gagcgaatga gagagaagaa aatcggaaaa aagacgtttt ctctttgcga CD 501 gatccgaaag tggagaacgc attgcgttct ctgggcacat aggatcaaac CD 551 gtaaagcagc gctttcttgg cagagtttga ggcagcaaaa aactttagaa CD 601 cttgttggag ctgctgagca taacgaatcg aagctgaagg cggatcaagg CD 651 tagcttgctc ccaaggcaag tgcttgctta cgctttatgt agtggtcggc CD 701 cttcctacct tcatgcctct agaagcttct acaaagcttt gcttccggta CD 751 gaagctagtc gcttcggtag cttgcccgcc aagccgccta taggcgaagg CD 801 gccgaaggat ggagcgtaca aagtcgatcg tgcacctgtc acttatatat CD 851 tagccagtca tcaattggaa gcgggtaata tggtgataaa ttgcgattgc CD 901 tccaaacctt ctaaaagcgg cttcttgcga cctgcccaga atgctcatac CD 951 ataccttcgg ttccaagagc ttggacgcac agtgaataaa ggtcgggttg CD 1001 aagggggcag tcagctggca gcttcttggc cacgcccccc tgcttataga CD 1051 cacgagatat tggatctaaa ttcaaaagta ggaaatagca taccattagc CD 1101 tgatatacgt atgggaacat gggtacatga tattgaatgt catccaggtc CD 1151 aaggcgcaaa gctggctcgg gccgcaggaa cttatgctaa aataattaag CD 1201 gagccagccC cacaatgtct tgtgcggcta ccatcgggtg ttgaaaaact CD 1251 catagattcc cgatgccgag ctactattgg tatagtttcc aatcccaacc CD 1301 atggtgcacg taagcttaga aaagcaggac aaagccggtg gtcaggcaga CD 1351 cgccccattg ttcgtggtgt tgcaatgaat ccagtggatc atcctcatgg CD 1401 aggaggtgag gggcgcacga aaggaggtag accttcggtg tcaccttggg CD 1451 ggaagcccac caaagcagga tttcgggcag gagtgggggt ggggaaacgc CD 1501 agaatttag FT EDITED CDNA CD 1 atgagacaaa gcataaaggg gagagcgctt agacatttca ctttgagtac CD 51 ggggaagtcc gcagggagga attcttccgg gcgtattact gtttttcacc CD 101 gagggggtgg atcgaagcga ttgcagcgaa aaattgacct taaacgaagc CD 151 acttcgtcta ttggcattgt ggaaaggatc gaatatgacc ctaatcgttc CD 201 ttctcggatc gctctagtac gatggatcga aggggtgctg cccggccgcc CD 251 agaggaaatt caagacgata gaagagttcg ctctgccgcg taagatcctc CD 301 gaatccacca cggccactat cttttgcctt ttttcgttct cttccctgtc CD 351 ctctcccttg gcccagggag agactgcatc cctttccttc ggcagctctt CD 401 taggtttccc aaggatagcg gtagctgggg caaagcccgc tttcttcgcg CD 451 gagcgaatga gagagaagaa aatcggaaaa aagacgtttt ctctttgcga CD 501 gatccgaaag tggagaacgc attgcgttct ctgggcacat aggatcaaac CD 551 gtaaagcagc gctttcttgg cagagtttga ggcagcaaaa aactttagaa CD 601 cttgttggag ctgctgagca taacgaatcg aagctgaagg cggatcaagg CD 651 tagcttgctc ccaaggcaag tgcttgctta cgctttatgt agtggtcggc CD 701 cttcctacct tcatgcctct agaagcttct acaaagcttt gcttccggta CD 751 gaagctagtc gcttcggtag cttgcccgcc aagccgccta taggcgaagg CD 801 gccgaaggat ggagcgtaca aagtcgatcg tgcacctgtc acttatatat CD 851 tagccagtca tcaattggaa gcgggtaata tggtgataaa ttgcgattgc CD 901 tccaaacctt ctaaaagcgg cttcttgcga cctgcccaga atgctcatac CD 951 ataccttcgg ttccaagagc ttggacgcac agtgaataaa ggtcgggttg CD 1001 aagggggcag tcagctggca gcttcttggc cacgcccccc tgcttataga CD 1051 cacgagatat tggatctaaa ttcaaaagta ggaaatagca taccattagc CD 1101 tgatatacgt atgggaacat gggtacatga tattgaatgt catccaggtc CD 1151 aaggcgcaaa gctggctcgg gccgcaggaa cttatgctaa aataattaag CD 1201 gagccagccT cacaatgtct tgtgcggcta ccatcgggtg ttgaaaaact CD 1251 catagattcc cgatgccgag ctactattgg tatagtttcc aatcccaacc CD 1301 atggtgcacg taagcttaga aaagcaggac aaagccggtg gtcaggcaga CD 1351 cgccccattg ttcgtggtgt tgcaatgaat ccagtggatc atcctcatgg CD 1401 aggaggtgag gggcgcacga aaggaggtag accttcggtg tcaccttggg CD 1451 ggaagcccac caaagcagga tttcgggcag gagtgggggt ggggaaacgc CD 1501 agaatttag SQ SEQUENCE 503 AA; MRQSIKGRAL RHFTLSTGKS AGRNSSGRIT VFHRGGGSKR LQRKIDLKRS TSSIGIVERI EYDPNRSSRI ALVRWIEGVL PGRQRKFKTI EEFALPRKIL ESTTATIFCL FSFSSLSSPL AQGETASLSF GSSLGFPRIA VAGAKPAFFA ERMREKKIGK KTFSLCEIRK WRTHCVLWAH RIKRKAALSW QSLRQQKTLE LVGAAEHNES KLKADQGSLL PRQVLAYALC SGRPSYLHAS RSFYKALLPV EASRFGSLPA KPPIGEGPKD GAYKVDRAPV TYILASHQLE AGNMVINCDC SKPSKSGFLR PAQNAHTYLR FQELGRTVNK GRVEGGSQLA ASWPRPPAYR HEILDLNSKV GNSIPLADIR MGTWVHDIEC HPGQGAKLAR AAGTYAKIIK EPASQCLVRL PSGVEKLIDS RCRATIGIVS NPNHGARKLR KAGQSRWSGR RPIVRGVAMN PVDHPHGGGE GRTKGGRPSV SPWGKPTKAG FRAGVGVGKR RI* // ID D78336_2 STANDARD; PRT; 94 AA. AC D78336; DT Tue Jul 21 07:05:09 2009 DE Oryza sativa Japonica Group mitochondrial gene for ribosomal OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Plant Mol. Biol. 31 (4), 853-862 (1996) RL PUBMED 8806415 FT Full length CDS FT GENE : FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA11351.2 FT PROTEIN_NAME : ribosomal protein S19 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 4112 - 4393 FT DIRECTIONS : positive FT EDITING : 26 L(Ctg) -> L(Ttg) FT EDITING : 39 S(tCg) -> L(tTg) FT EDITING : 42 F(ttC) -> F(ttT) FT EDITING : 46 S(tcC) -> S(tcT) FT EDITING : 55 P(CCt) -> F(TTt) FT CODON_START : 1 CL CDNALEN 282 NT; CD 1 atgccacgac gatctatatg gaagggaagt tttgttgatg ctttcctgtt CD 51 tagaataaag aagaacagag aaagtCtgat gagcaggaaa atttggtcac CD 101 gtagatcttc tatttCgccg gaattCgttg attgctcCgt actcatttac CD 151 aatggaaaaa ctCCtgttcg ttgtaagatc actgaaggaa aggttggtca CD 201 taaatttgga gagtttgctt ttacacggag acgaagaccc tatcaaacaa CD 251 atagaggaaa gggcagaaag gggaaaaagt aa FT EDITED CDNA CD 1 atgccacgac gatctatatg gaagggaagt tttgttgatg ctttcctgtt CD 51 tagaataaag aagaacagag aaagtTtgat gagcaggaaa atttggtcac CD 101 gtagatcttc tatttTgccg gaattTgttg attgctcTgt actcatttac CD 151 aatggaaaaa ctTTtgttcg ttgtaagatc actgaaggaa aggttggtca CD 201 taaatttgga gagtttgctt ttacacggag acgaagaccc tatcaaacaa CD 251 atagaggaaa gggcagaaag gggaaaaagt aa SQ SEQUENCE 94 AA; MPRRSIWKGS FVDAFLFRIK KNRESLMSRK IWSRRSSILP EFVDCSVLIY NGKTFVRCKI TEGKVGHKFG EFAFTRRRRP YQTNRGKGRK GKK* // ID D84373_1 STANDARD; PRT; 382 AA. AC D84373; DT Tue Jul 21 07:05:09 2009 DE Brassica napus mitochondrial gene for Ccl1, complete cds. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Mol. Gen. Genet. 252 (3), 292-302 (1996) RL PUBMED 8842149 FT Full length CDS FT GENE : FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA12329.2 FT PROTEIN_NAME : Ccl1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 494 - 1639 FT DIRECTIONS : positive FT EDITING : 13 P(cCg) -> L(cTg) FT EDITING : 33 P(cCt) -> L(cTt) FT EDITING : 46 S(tCg) -> L(tTg) FT EDITING : 51 P(Cct) -> S(Tct) FT EDITING : 86 R(Cgg) -> W(Tgg) FT EDITING : 88 P(cCa) -> L(cTa) FT EDITING : 95 L(Ctt) -> F(Ttt) FT EDITING : 124 F(ttC) -> F(ttT) FT EDITING : 236 P(CCt) -> F(TTt) FT EDITING : 259 S(tCa) -> L(tTa) FT EDITING : 263 P(cCa) -> L(cTa) FT EDITING : 268 S(tCa) -> L(tTa) FT EDITING : 318 R(Cgc) -> C(Tgc) FT EDITING : 326 R(Cgt) -> C(Tgt) FT CODON_START : 1 CL CDNALEN 1146 NT; CD 1 atgtcaatat atgaattctt tcattattcg ttatttcCgg gtcttttcgt CD 51 tgcattcact tacaacaaga aacaaccacc agcgtttggt gcagcacCtg CD 101 cattttggtg cattcttctt tctttccttg gtctttCgtt ctgtcatatt CD 151 Cctaataact tatccaatta caacgtatta accgctaatg cacctttctt CD 201 ttatcaaatc tcaggaacat ggtctaatca tgagggtagt attttattat CD 251 ggtgtCggat ccCaaatttt tatggatttt ttCtttgtta ccggggtcga CD 301 ccccaaagcc ataatgtctt aaaacaagga ggccataggg aaagtctttt CD 351 tttttttttt ttctcgaact tCgtgaagaa ctcaatttta tctctccctc CD 401 gttacgaaca agaaagtggt ttgaaaaatc agttgtacac tcccttcgtt CD 451 ctacgaaccc ttgttgattc tgaacttcgt ttgcgaagga accggacttt CD 501 tgacggacca gccctttttt atgcgccgct tgatcctgaa aggaaaatga CD 551 gctttgctcc tctggacgct tggcgctccc gtggttcgcg agaaggaaaa CD 601 aggactcatc ctttgttgca tctggcacga gatgataaag agagagcttc CD 651 gtctatcgat gaacagcgaa ttgacggagc tcttggcatt gctttgtttt CD 701 tctctCCttt cctatcagcg agttccgatc cttttgttcg aaatttcttt CD 751 gtttgtaccg aaccgcttgc agaatCaaat cctgttcCac aagatcctat CD 801 atCagctata catcctcctt gcatttatgc cggggacgtc gccagtgcgg CD 851 agggctttgg cttatgtaga tcaaaaatga tgaatgggat tgtggcactc CD 901 cactcgccgc caatgcggaa ggatgccgcc gaaaagaatg gaacgctgct CD 951 tCgctctgct ggatgcgtcg gatccCgtat aacaagcgag ctttttaccc CD 1001 tcaaattcaa acatgtgggc gcaaaatgct atcctgctct attgttacgt CD 1051 agcaatagaa gcccgctcat gctgcttcgg cggcgctttt tcgccttctc CD 1101 ttcgttctgg acaggagcga gaagccactc gactaaaagg tactga FT EDITED CDNA CD 1 atgtcaatat atgaattctt tcattattcg ttatttcTgg gtcttttcgt CD 51 tgcattcact tacaacaaga aacaaccacc agcgtttggt gcagcacTtg CD 101 cattttggtg cattcttctt tctttccttg gtctttTgtt ctgtcatatt CD 151 Tctaataact tatccaatta caacgtatta accgctaatg cacctttctt CD 201 ttatcaaatc tcaggaacat ggtctaatca tgagggtagt attttattat CD 251 ggtgtTggat ccTaaatttt tatggatttt ttTtttgtta ccggggtcga CD 301 ccccaaagcc ataatgtctt aaaacaagga ggccataggg aaagtctttt CD 351 tttttttttt ttctcgaact tTgtgaagaa ctcaatttta tctctccctc CD 401 gttacgaaca agaaagtggt ttgaaaaatc agttgtacac tcccttcgtt CD 451 ctacgaaccc ttgttgattc tgaacttcgt ttgcgaagga accggacttt CD 501 tgacggacca gccctttttt atgcgccgct tgatcctgaa aggaaaatga CD 551 gctttgctcc tctggacgct tggcgctccc gtggttcgcg agaaggaaaa CD 601 aggactcatc ctttgttgca tctggcacga gatgataaag agagagcttc CD 651 gtctatcgat gaacagcgaa ttgacggagc tcttggcatt gctttgtttt CD 701 tctctTTttt cctatcagcg agttccgatc cttttgttcg aaatttcttt CD 751 gtttgtaccg aaccgcttgc agaatTaaat cctgttcTac aagatcctat CD 801 atTagctata catcctcctt gcatttatgc cggggacgtc gccagtgcgg CD 851 agggctttgg cttatgtaga tcaaaaatga tgaatgggat tgtggcactc CD 901 cactcgccgc caatgcggaa ggatgccgcc gaaaagaatg gaacgctgct CD 951 tTgctctgct ggatgcgtcg gatccTgtat aacaagcgag ctttttaccc CD 1001 tcaaattcaa acatgtgggc gcaaaatgct atcctgctct attgttacgt CD 1051 agcaatagaa gcccgctcat gctgcttcgg cggcgctttt tcgccttctc CD 1101 ttcgttctgg acaggagcga gaagccactc gactaaaagg tactga SQ SEQUENCE 382 AA; MSIYEFFHYS LFLGLFVAFT YNKKQPPAFG AALAFWCILL SFLGLLFCHI SNNLSNYNVL TANAPFFYQI SGTWSNHEGS ILLWCWILNF YGFFFCYRGR PQSHNVLKQG GHRESLFFFF FSNFVKNSIL SLPRYEQESG LKNQLYTPFV LRTLVDSELR LRRNRTFDGP ALFYAPLDPE RKMSFAPLDA WRSRGSREGK RTHPLLHLAR DDKERASSID EQRIDGALGI ALFFSFFLSA SSDPFVRNFF VCTEPLAELN PVLQDPILAI HPPCIYAGDV ASAEGFGLCR SKMMNGIVAL HSPPMRKDAA EKNGTLLCSA GCVGSCITSE LFTLKFKHVG AKCYPALLLR SNRSPLMLLR RRFFAFSSFW TGARSHSTKR Y* // ID D84374_1 STANDARD; PRT; 212 AA. AC D84374; DT Tue Jul 21 07:05:09 2009 DE Brassica napus mitochondrial gene for Ccl1, partial cds. OS mitochondrion Brassica napus (rape) OC Brassica napus RN [1] RL Mol. Gen. Genet. 252 (3), 292-302 (1996) RL PUBMED 8842149 FT N-terminal not determined FT GENE : FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : BAA12330.2 FT PROTEIN_NAME : Ccl1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1259 - 1894 FT DIRECTIONS : positive FT EDITING : 30 S(tCg) -> L(tTg) FT EDITING : 39 N(aaC) -> N(aaT) FT EDITING : 67 P(cCa) -> L(cTa) FT EDITING : 78 R(Cgg) -> W(Tgg) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 95 R(Cgg) -> W(Tgg) FT EDITING : 101 R(Cgt) -> C(Tgt) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 123 P(cCa) -> L(cTa) FT EDITING : 139 P(Ccc) -> S(Tcc) FT CODON_START : 1 CL CDNALEN 636 NT; CD 1 tctttgctct gggcaggagc gctagtggac acggggaggg agcaggcgaa CD 51 gcgtgtcgtt cgtaatggaa agaaagagac cactacttCg cctctttgtt CD 101 ggaccgccgg cgcgaaCaca gtggtctctg atcaggacca ggaaccaatt CD 151 cgaatttgga tcttgacatg ttggtggttt ttaaccgtag gcatcttgcC CD 201 aggaagttgg tgggcttatc atgaattagg tCggggtggc tggtggtttC CD 251 gggatcccgt agaaaatgct tcttttatgc ctCgggtatt agccacagct CD 301 Cgtattcatt ctgtaatttt accccttctt cattcttgga cctCgtttct CD 351 taatattgtg acttttcCat gctgtgtctt aggaaccttt tcaatacggt CD 401 ccggattgct agctCccgtt catagttttg ctacagatga tacacgagga CD 451 atctttttat ggtggttctt ccttctaatg accggcatat ctatgattct CD 501 tttctaccag atgaagcagc aggcatcggt ccgtagaacg tataaaaaag CD 551 aaatggttgt ggcgcgaagt actcttgtgc atctacgtca ctcggctcgc CD 601 gcgcaacccc gccccgttat gttatggaag aattga FT EDITED CDNA CD 1 tctttgctct gggcaggagc gctagtggac acggggaggg agcaggcgaa CD 51 gcgtgtcgtt cgtaatggaa agaaagagac cactacttTg cctctttgtt CD 101 ggaccgccgg cgcgaaTaca gtggtctctg atcaggacca ggaaccaatt CD 151 cgaatttgga tcttgacatg ttggtggttt ttaaccgtag gcatcttgcT CD 201 aggaagttgg tgggcttatc atgaattagg tTggggtggc tggtggtttT CD 251 gggatcccgt agaaaatgct tcttttatgc ctTgggtatt agccacagct CD 301 Tgtattcatt ctgtaatttt accccttctt cattcttgga cctTgtttct CD 351 taatattgtg acttttcTat gctgtgtctt aggaaccttt tcaatacggt CD 401 ccggattgct agctTccgtt catagttttg ctacagatga tacacgagga CD 451 atctttttat ggtggttctt ccttctaatg accggcatat ctatgattct CD 501 tttctaccag atgaagcagc aggcatcggt ccgtagaacg tataaaaaag CD 551 aaatggttgt ggcgcgaagt actcttgtgc atctacgtca ctcggctcgc CD 601 gcgcaacccc gccccgttat gttatggaag aattga SQ SEQUENCE 212 AA; SLLWAGALVD TGREQAKRVV RNGKKETTTL PLCWTAGANT VVSDQDQEPI RIWILTCWWF LTVGILLGSW WAYHELGWGG WWFWDPVENA SFMPWVLATA CIHSVILPLL HSWTLFLNIV TFLCCVLGTF SIRSGLLASV HSFATDDTRG IFLWWFFLLM TGISMILFYQ MKQQASVRRT YKKEMVVARS TLVHLRHSAR AQPRPVMLWK N* // ID DQ167399_33 STANDARD; PRT; 75 AA. AC DQ167399; DT Tue Jul 21 07:05:12 2009 DE Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, OS mitochondrion Oryza sativa Indica Group OC Oryza sativa Indica Group RN [1] RL Plant Physiol. 142 (2), 401-410 (2006) RL PUBMED 16384910 FT Full length CDS FT GENE : atp9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAZ99259.1 FT PROTEIN_NAME : ATP synthase F0 subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 264086 - 264310 FT DIRECTIONS : positive FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gagctaaatc aataggtgcc ggagctgcta caattgcttt CD 51 agcgggagct gctgtcggta ttggaaacgt cctcagttct tcgattcatt CD 101 ccgtggcgcg aaatccttca ttggctaaac aattatttgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca ttgtttgccc caatgatggc CD 201 ctttctgatt tcattcgttt tcCga FT EDITED CDNA CD 1 atgttagaag gagctaaatc aataggtgcc ggagctgcta caattgcttt CD 51 agcgggagct gctgtcggta ttggaaacgt cctcagttct tcgattcatt CD 101 ccgtggcgcg aaatccttca ttggctaaac aattatttgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca ttgtttgccc caatgatggc CD 201 ctttctgatt tcattcgttt tcTga SQ SEQUENCE 75 AA; MLEGAKSIGA GAATIALAGA AVGIGNVLSS SIHSVARNPS LAKQLFGYAI LGFALTEAIA LFAPMMAFLI SFVF* // ID DQ167400_31 STANDARD; PRT; 75 AA. AC DQ167400; DT Tue Jul 21 07:05:12 2009 DE Oryza sativa (japonica cultivar-group) cultivar Nipponbare OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Plant Physiol. 142 (2), 401-410 (2006) RL PUBMED 16384910 FT Full length CDS FT GENE : atp9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAZ99366.1 FT PROTEIN_NAME : ATP synthase F0 subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 263274 - 263498 FT DIRECTIONS : positive FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gagctaaatc aataggtgcc ggagctgcta caattgcttt CD 51 agcgggagct gctgtcggta ttggaaacgt cctcagttct tcgattcatt CD 101 ccgtggcgcg aaatccttca ttggctaaac aattatttgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca ttgtttgccc caatgatggc CD 201 ctttctgatt tcattcgttt tcCga FT EDITED CDNA CD 1 atgttagaag gagctaaatc aataggtgcc ggagctgcta caattgcttt CD 51 agcgggagct gctgtcggta ttggaaacgt cctcagttct tcgattcatt CD 101 ccgtggcgcg aaatccttca ttggctaaac aattatttgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca ttgtttgccc caatgatggc CD 201 ctttctgatt tcattcgttt tcTga SQ SEQUENCE 75 AA; MLEGAKSIGA GAATIALAGA AVGIGNVLSS SIHSVARNPS LAKQLFGYAI LGFALTEAIA LFAPMMAFLI SFVF* // ID DQ167807_31 STANDARD; PRT; 75 AA. AC DQ167807; DT Tue Jul 21 07:05:12 2009 DE Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, OS mitochondrion Oryza sativa Japonica Group OC Oryza sativa Japonica Group RN [1] RL Plant Physiol. 142 (2), 401-410 (2006) RL PUBMED 16384910 FT Full length CDS FT GENE : atp9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAZ99313.1 FT PROTEIN_NAME : ATP synthase F0 subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 263277 - 263501 FT DIRECTIONS : positive FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gagctaaatc aataggtgcc ggagctgcta caattgcttt CD 51 agcgggagct gctgtcggta ttggaaacgt cctcagttct tcgattcatt CD 101 ccgtggcgcg aaatccttca ttggctaaac aattatttgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca ttgtttgccc caatgatggc CD 201 ctttctgatt tcattcgttt tcCga FT EDITED CDNA CD 1 atgttagaag gagctaaatc aataggtgcc ggagctgcta caattgcttt CD 51 agcgggagct gctgtcggta ttggaaacgt cctcagttct tcgattcatt CD 101 ccgtggcgcg aaatccttca ttggctaaac aattatttgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca ttgtttgccc caatgatggc CD 201 ctttctgatt tcattcgttt tcTga SQ SEQUENCE 75 AA; MLEGAKSIGA GAATIALAGA AVGIGNVLSS SIHSVARNPS LAKQLFGYAI LGFALTEAIA LFAPMMAFLI SFVF* // ID DQ185064_1 STANDARD; PRT; 260 AA. AC DQ185064; DT Tue Jul 21 07:05:12 2009 DE Solanum tuberosum cytochrome c oxidase subunit II (COX2) gene, OS mitochondrion Solanum tuberosum (potato) OC Solanum tuberosum RN [1] RL Nucleic Acids Res. 33 (22), 7058-7065 (2005) RL PUBMED 16352866 FT Full length CDS FT GENE : COX2 FT NOTE : COX 2 FT LOCUS_TAG : FT PROTEIN_ID : ABB43241.1 FT PROTEIN_NAME : cytochrome c oxidase subunit II FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 128/1 FT EDITING : 13 P(cCt) -> L(cTt) FT EDITING : 24 S(tCt) -> F(tTt) FT EDITING : 36 T(aCa) -> I(aTa) FT EDITING : 54 S(tCa) -> L(tTa) FT EDITING : 85 R(Cgg) -> W(Tgg) FT EDITING : 127 R(Cgg) -> W(Tgg) FT EDITING : 147 T(aCg) -> M(aTg) FT EDITING : 185 P(cCt) -> L(cTt) FT EDITING : 210 S(tCg) -> L(tTg) FT EDITING : 240 P(Cct) -> S(Tct) FT EDITING : 247 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 780 NT; CD 1 atgattgttc tagaatggct attcctcaca attgctcCtt gtgatgcagc CD 51 ggaaccatgg caattaggat Ctcaagacgc agcaacacct ataatgcaag CD 101 gaataaCaga cttacatcac gatgtctttt tcttcgttat tctgattttg CD 151 gttttcgtat Catggatctt gggtcgcgct ttatggcatt tccactataa CD 201 aaaaaatcca atcccgcaaa ggattgttca tggaactact atcgagattc CD 251 ttCggaccat atttcctagt atcatcccta tgttcattgc tataccatca CD 301 tttgctctgt tatactcaat ggacgaggta gtagtagatc cagccattac CD 351 tataaaagct attggacatc aatggtatCg gaatgagtat tcggactata CD 401 acagttccga tgaacagtca ctcacttttg acagttataC gattccagaa CD 451 gatgatctag aattgggtca atcacgttta ttagaagtcg acaatagagt CD 501 ggttctacca gcaaagagcc atatacgttt tattgtaaca tctgctgatg CD 551 tacCtcatag ttgggctgta ccttccttag gtgtcaaatg tgatgctgta CD 601 ccgggtcgtt taaatcagac ctctatttCg gtacaacgag aaggagttta CD 651 ctatggtcag tgcagtgaga tttgtggaac taatcatgcc tttatgccta CD 701 tcgtcgtaga agctgttCct aggaaagatg atggctctCg ggtatccaat CD 751 caattaatcc cacaaaccgg ggaagcttaa FT EDITED CDNA CD 1 atgattgttc tagaatggct attcctcaca attgctcTtt gtgatgcagc CD 51 ggaaccatgg caattaggat Ttcaagacgc agcaacacct ataatgcaag CD 101 gaataaTaga cttacatcac gatgtctttt tcttcgttat tctgattttg CD 151 gttttcgtat Tatggatctt gggtcgcgct ttatggcatt tccactataa CD 201 aaaaaatcca atcccgcaaa ggattgttca tggaactact atcgagattc CD 251 ttTggaccat atttcctagt atcatcccta tgttcattgc tataccatca CD 301 tttgctctgt tatactcaat ggacgaggta gtagtagatc cagccattac CD 351 tataaaagct attggacatc aatggtatTg gaatgagtat tcggactata CD 401 acagttccga tgaacagtca ctcacttttg acagttataT gattccagaa CD 451 gatgatctag aattgggtca atcacgttta ttagaagtcg acaatagagt CD 501 ggttctacca gcaaagagcc atatacgttt tattgtaaca tctgctgatg CD 551 tacTtcatag ttgggctgta ccttccttag gtgtcaaatg tgatgctgta CD 601 ccgggtcgtt taaatcagac ctctatttTg gtacaacgag aaggagttta CD 651 ctatggtcag tgcagtgaga tttgtggaac taatcatgcc tttatgccta CD 701 tcgtcgtaga agctgttTct aggaaagatg atggctctTg ggtatccaat CD 751 caattaatcc cacaaaccgg ggaagcttaa SQ SEQUENCE 260 AA; MIVLEWLFLT IALCDAAEPW QLGFQDAATP IMQGIIDLHH DVFFFVILIL VFVLWILGRA LWHFHYKKNP IPQRIVHGTT IEILWTIFPS IIPMFIAIPS FALLYSMDEV VVDPAITIKA IGHQWYWNEY SDYNSSDEQS LTFDSYMIPE DDLELGQSRL LEVDNRVVLP AKSHIRFIVT SADVLHSWAV PSLGVKCDAV PGRLNQTSIL VQREGVYYGQ CSEICGTNHA FMPIVVEAVS RKDDGSWVSN QLIPQTGEA* // ID DQ202504_1 STANDARD; PRT; 144 AA. AC DQ202504; DT Tue Jul 21 07:05:12 2009 DE Brassica oleracea ATPase subunit 4 (atp4) gene, partial cds; OS mitochondrion Brassica oleracea OC Brassica oleracea RN [1] RL Plant J. 47 (3), 408-416 (2006) FT C-terminal not determined FT GENE : atp4 FT NOTE : orf25 FT LOCUS_TAG : FT PROTEIN_ID : ABA43690.1 FT PROTEIN_NAME : ATPase subunit 4 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 431 FT DIRECTIONS : positive FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 46 I(atC) -> I(atT) FT EDITING : 72 S(tCg) -> L(tTg) FT EDITING : 83 P(cCt) -> L(cTt) FT EDITING : 84 P(CCg) -> L(TTg) FT EDITING : 132 S(tCa) -> L(tTa) FT EDITING : 139 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 431 NT; CD 1 atgagattga gtattacgaa tatggatggt agaaagatgt tatttgctgc CD 51 tattctatct atttgtgcat taagttcgaa gaagatctCa atctataatg CD 101 aagaaatgat agtagctctt tgttttatag gctttatCat attcagtcgt CD 151 aagagtttag gtacgacttt caaagtgact ctcgacggga gaatccaggc CD 201 tattcaggaa gaatCgcagc aattccccaa tcctaacgaa gtagttcCtC CD 251 Cggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgt CD 301 ggcaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgtt aagtCagcaa CD 401 cacttacaaa tgccaCttct tcccgtcgca t FT EDITED CDNA CD 1 atgagattga gtattacgaa tatggatggt agaaagatgt tatttgctgc CD 51 tattctatct atttgtgcat taagttcgaa gaagatctTa atctataatg CD 101 aagaaatgat agtagctctt tgttttatag gctttatTat attcagtcgt CD 151 aagagtttag gtacgacttt caaagtgact ctcgacggga gaatccaggc CD 201 tattcaggaa gaatTgcagc aattccccaa tcctaacgaa gtagttcTtT CD 251 Tggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgt CD 301 ggcaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgtt aagtTagcaa CD 401 cacttacaaa tgccaTttct tcccgtcgca t SQ SEQUENCE 144 AA; MRLSITNMDG RKMLFAAILS ICALSSKKIL IYNEEMIVAL CFIGFIIFSR KSLGTTFKVT LDGRIQAIQE ELQQFPNPNE VVLLESNEQQ RLLRISLRIC GTVVESLPMA RCAPKCEKTV QALLCRNLNV KLATLTNAIS SRRX // ID DQ205443_1 STANDARD; PRT; 205 AA. AC DQ205443; DT Tue Jul 21 07:05:12 2009 DE Brassica oleracea ccb206 gene, partial cds; mitochondrial. OS mitochondrion Brassica oleracea OC Brassica oleracea RN [1] RL Unpublished FT C-terminal not determined FT GENE : FT NOTE : cytochrome C biogenesis FT LOCUS_TAG : FT PROTEIN_ID : ABB02055.1 FT PROTEIN_NAME : ccb206 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 615 FT DIRECTIONS : positive FT EDITING : 10 H(Cat) -> Y(Tat) FT EDITING : 15 P(Ccc) -> S(Tcc) FT EDITING : 24 P(cCa) -> L(cTa) FT EDITING : 25 F(ttC) -> F(ttT) FT EDITING : 27 S(tCg) -> L(tTg) FT EDITING : 29 I(atC) -> I(atT) FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 46 S(tCc) -> F(tTc) FT EDITING : 50 P(CCg) -> L(TTg) FT EDITING : 52 R(Cgg) -> W(Tgg) FT EDITING : 53 I(atC) -> I(atT) FT EDITING : 54 P(Cct) -> S(Tct) FT EDITING : 55 P(cCg) -> L(cTg) FT EDITING : 58 P(Cct) -> S(Tct) FT EDITING : 60 P(cCt) -> L(cTt) FT EDITING : 61 P(Ccc) -> S(Tcc) FT EDITING : 65 P(CCt) -> F(TTt) FT EDITING : 96 R(Cgg) -> W(Tgg) FT EDITING : 102 R(Cgt) -> C(Tgt) FT EDITING : 104 F(ttC) -> F(ttT) FT EDITING : 113 S(tCg) -> L(tTg) FT EDITING : 123 R(Cgg) -> W(Tgg) FT EDITING : 127 P(CCa) -> L(TTa) FT EDITING : 142 R(Cgt) -> C(Tgt) FT EDITING : 143 S(tCg) -> L(tTg) FT EDITING : 156 S(tCg) -> L(tTg) FT EDITING : 159 P(CCa) -> L(TTa) FT EDITING : 162 S(tCa) -> L(tTa) FT EDITING : 171 S(tCt) -> F(tTt) FT EDITING : 172 R(Cgt) -> C(Tgt) FT EDITING : 184 S(tCa) -> L(tTa) FT EDITING : 185 S(tCg) -> L(tTg) FT EDITING : 189 S(tCc) -> F(tTc) FT EDITING : 190 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 615 NT; CD 1 atgagacgac tttttcttga actatatCat aaactgatct tcCcctccac CD 51 accaatcacg agtttttctc CattCctctC gtatatCgtc gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttCat gtcattCcca tttaggtCCg CD 151 attCggatCC ctcCgttgtt tCcttttcCt Cccgcacctt ttCCtcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt acttattgct CD 251 tgccaaagat cctacttcta caattggtgg gtcacCgggt tattcaaata CD 301 agtCgtgttt tCtgtggttt tcccatgtta caactttCgt accaattcgg CD 351 tcgatccgga atggatCggt taaacattCC attagggagc ctggtcttga CD 401 ctcttctgtg tggtattcat tctCgttCgg ctcttggaat cacatccagc CD 451 agtggttgga acagctCgca aaatCCaacc acttCaccta ctttattgcc CD 501 cctaaccgtt tCtCgtacct ctattgaaac agaatggttt catgttcttt CD 551 CatCgattgg ttattCctCt ctgttcgtat ctctttttcc aatttcggtc CD 601 tcgattagtt tacaa FT EDITED CDNA CD 1 atgagacgac tttttcttga actatatTat aaactgatct tcTcctccac CD 51 accaatcacg agtttttctc TattTctctT gtatatTgtc gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttTat gtcattTcca tttaggtTTg CD 151 attTggatTT ctcTgttgtt tTcttttcTt Tccgcacctt ttTTtcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt acttattgct CD 251 tgccaaagat cctacttcta caattggtgg gtcacTgggt tattcaaata CD 301 agtTgtgttt tTtgtggttt tcccatgtta caactttTgt accaattcgg CD 351 tcgatccgga atggatTggt taaacattTT attagggagc ctggtcttga CD 401 ctcttctgtg tggtattcat tctTgttTgg ctcttggaat cacatccagc CD 451 agtggttgga acagctTgca aaatTTaacc acttTaccta ctttattgcc CD 501 cctaaccgtt tTtTgtacct ctattgaaac agaatggttt catgttcttt CD 551 TatTgattgg ttattTctTt ctgttcgtat ctctttttcc aatttcggtc CD 601 tcgattagtt tacaa SQ SEQUENCE 205 AA; MRRLFLELYY KLIFSSTPIT SFSLFLLYIV VTPLMLGFEK DFLCHFHLGL IWISLLFSFL SAPFFRNEKE DGTLELYYLS TYCLPKILLL QLVGHWVIQI SCVFCGFPML QLLYQFGRSG MDWLNILLGS LVLTLLCGIH SCLALGITSS SGWNSLQNLT TLPTLLPLTV FCTSIETEWF HVLLLIGYFF LFVSLFPISV SISLQ // ID DQ375553_1 STANDARD; PRT; 109 AA. AC DQ375553; DT Tue Jul 21 07:05:26 2009 DE Populus trichocarpa succinate dehydrogenase subunit 4 (sdh4) gene, OS mitochondrion Populus trichocarpa (Populus balsamifera subsp. OC Populus trichocarpa RN [1] RL New Phytol. 172 (3), 429-439 (2006) FT Full length CDS FT GENE : sdh4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABD24440.1 FT PROTEIN_NAME : succinate dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 18 - 344 FT DIRECTIONS : positive FT EDITING : 45 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 327 NT; CD 1 atgaaggaac gaaagagtgg attgaggaat gaaagctcga agacaaagag CD 51 aatcgggctt ttccaaagaa ttactgcagc tttgctgctc cctttgatta CD 101 tcatatacaa aaaagtctct tccactttcc tacCcaatct ctctttattc CD 151 tggcatataa atgaagggat cgaagagatt atggcagatt atgttcacca CD 201 agaaatgacc cgaaattgga tcttggtcta tttgagattg ttccttttaa CD 251 tcgtaatcaa agatgttttc ttgtctttcg tttcttttct gaacaaatcg CD 301 aagaacctaa tggattcaga cagttaa FT EDITED CDNA CD 1 atgaaggaac gaaagagtgg attgaggaat gaaagctcga agacaaagag CD 51 aatcgggctt ttccaaagaa ttactgcagc tttgctgctc cctttgatta CD 101 tcatatacaa aaaagtctct tccactttcc tacTcaatct ctctttattc CD 151 tggcatataa atgaagggat cgaagagatt atggcagatt atgttcacca CD 201 agaaatgacc cgaaattgga tcttggtcta tttgagattg ttccttttaa CD 251 tcgtaatcaa agatgttttc ttgtctttcg tttcttttct gaacaaatcg CD 301 aagaacctaa tggattcaga cagttaa SQ SEQUENCE 109 AA; MKERKSGLRN ESSKTKRIGL FQRITAALLL PLIIIYKKVS STFLLNLSLF WHINEGIEEI MADYVHQEMT RNWILVYLRL FLLIVIKDVF LSFVSFLNKS KNLMDSDS* // ID DQ380465_1 STANDARD; PRT; 99 AA. AC DQ380465; DT Tue Jul 21 07:05:26 2009 DE Typha latifolia ribosomal protein S14 gene, partial cds; OS mitochondrion Typha latifolia OC Typha latifolia RN [1] RL BMC Evol. Biol. 6 (1), 55 (2006) RL PUBMED 16842621 FT N-terminal not determined FT GENE : FT NOTE : rps14 FT LOCUS_TAG : FT PROTEIN_ID : ABD42932.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 298 FT DIRECTIONS : positive FT EDITING : 13 L(ctT) -> L(ctC) FT EDITING : 63 S(tCc) -> F(tTc) FT EDITING : 89 P(Cct) -> S(Tct) FT CODON_START : 2 CL CDNALEN 298 NT; CD 1 ggagaagcga aatatacgag ttcacaaacg tagattgctT gcggctaaat CD 51 atgaattgag acgaaagctt tataaagcct tttgtaaaga tcccgatctt CD 101 ccgtctgata tgcgggacaa acatcgttat aagttgtcca agttgccaag CD 151 aaatagttca atggcacgag tcagaaaccg atgtatttCc acgggtcgcc CD 201 ctcgttccgt agttgagttc tttcgcattt ctcgtatcgt ttttcgtgaa CD 251 ttagcatctc gaggtCcttt gatgggcata aagaaatcgt cttggtaa FT EDITED CDNA CD 1 ggagaagcga aatatacgag ttcacaaacg tagattgctC gcggctaaat CD 51 atgaattgag acgaaagctt tataaagcct tttgtaaaga tcccgatctt CD 101 ccgtctgata tgcgggacaa acatcgttat aagttgtcca agttgccaag CD 151 aaatagttca atggcacgag tcagaaaccg atgtatttTc acgggtcgcc CD 201 ctcgttccgt agttgagttc tttcgcattt ctcgtatcgt ttttcgtgaa CD 251 ttagcatctc gaggtTcttt gatgggcata aagaaatcgt cttggtaa SQ SEQUENCE 99 AA; EKRNIRVHKR RLLAAKYELR RKLYKAFCKD PDLPSDMRDK HRYKLSKLPR NSSMARVRNR CIFTGRPRSV VEFFRISRIV FRELASRGSL MGIKKSSW* // ID DQ380467_1 STANDARD; PRT; 101 AA. AC DQ380467; DT Tue Jul 21 07:05:26 2009 DE Juncus effusus ribosomal protein S14 gene, complete cds; OS mitochondrion Juncus effusus OC Juncus effusus RN [1] RL BMC Evol. Biol. 6 (1), 55 (2006) RL PUBMED 16842621 FT Full length CDS FT GENE : FT NOTE : rps14 FT LOCUS_TAG : FT PROTEIN_ID : ABD42934.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 303 FT DIRECTIONS : positive FT EDITING : 57 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atgttggaga agcgaaatat acgagatcac aaacgtagat tgcttgcggc CD 51 taaatatgaa ttgagacgaa agctttataa agccctttgt caagatcccg CD 101 atcttccgtc tgatatgcgg gacaaacatc gttataagtt gtccaagttg CD 151 ccacgaaata gttccttttC acgagtcaga aatcgatgta tttacacggg CD 201 tcgccctcgt tccgtatatg agttctttcg catttctcgt atcgtttttc CD 251 gtggattagc atctcgaggt tctttgatgg gcataaagaa atcgtcttgg CD 301 taa FT EDITED CDNA CD 1 atgttggaga agcgaaatat acgagatcac aaacgtagat tgcttgcggc CD 51 taaatatgaa ttgagacgaa agctttataa agccctttgt caagatcccg CD 101 atcttccgtc tgatatgcgg gacaaacatc gttataagtt gtccaagttg CD 151 ccacgaaata gttccttttT acgagtcaga aatcgatgta tttacacggg CD 201 tcgccctcgt tccgtatatg agttctttcg catttctcgt atcgtttttc CD 251 gtggattagc atctcgaggt tctttgatgg gcataaagaa atcgtcttgg CD 301 taa SQ SEQUENCE 101 AA; MLEKRNIRDH KRRLLAAKYE LRRKLYKALC QDPDLPSDMR DKHRYKLSKL PRNSSFLRVR NRCIYTGRPR SVYEFFRISR IVFRGLASRG SLMGIKKSSW * // ID DQ490951_22 STANDARD; PRT; 434 AA. AC DQ490951; DT Tue Jul 21 07:05:27 2009 DE Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome. OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : ccmFC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABE98674.1 FT PROTEIN_NAME : cytochrome c biogenesis FC FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 252/2 FT EDITING : 434 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1302 NT; CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatC CD 1301 ga FT EDITED CDNA CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatT CD 1301 ga SQ SEQUENCE 434 AA; MVQLQNFFFF ITSMVVPRGT AAPVLLKWFV SRDVPTGASS SNGTIIPIPI SLFPFLVYLH SRKFIRSMDR AKSGVLVKAS RPILLPDKIG RSSSARNALF RFVPVLHFLI IESMGDLSYL ESFCGLLCLQ FFRTLFSLPR DRSAKRERAL RSKGQTLRPK GNEQQNDKMR CPGHPHIERR VEGFGPVAFP APPSSSGACL GGVPPEIGLE ALALPTSRLL MAVGHDYYKK VKMNLSISHG GVCIFMLGVL LSNTNKIQFT QRLPLGPELH MGKERCCLRG LDHLHGPTSH SICGNFMIYK PSPTSERFMF EHDESLRADL LPINFPASYE NGKLEDFLMK NHEHKNFWFS MFPERRYYWS RETRSTTEVA IHTNPLTDLY APIGTGSSRT GGWYTTIMKL PFIFSIRIGF LLASSGGSRS LLRQLQKDKL HWN* // ID DQ490951_29 STANDARD; PRT; 101 AA. AC DQ490951; DT Tue Jul 21 07:05:27 2009 DE Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome. OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : nad4L FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABE98684.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 330661 - 330963 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDPIKYFTFS MIISILGIRG ILLNRRNILI MSMPIESMLL AVNLNFLVFS VSLDDMMGQS FASLVPTVAA AESAIGLAIF VITFRVRGTI AVEFINCIQG * // ID DQ490951_41 STANDARD; PRT; 396 AA. AC DQ490951; DT Tue Jul 21 07:05:27 2009 DE Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome. OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : atp6 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABL96308.1 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 550263 - 551450 FT DIRECTIONS : positive FT EDITING : 396 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1188 NT; CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac catccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggtac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaatttgga CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttccatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatCaa FT EDITED CDNA CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac catccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggtac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaatttgga CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttccatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatTaa SQ SEQUENCE 396 AA; MMMMTRWSST DMKRRNRILA NMVPIRNLSL PDYYEYEEEY HPVSREATRG VCILLRIDRY LSSIGRSIQD REVLRDFRQR LLFPQREAGY SFSEIYDDIR AHGVEASRLG QPLRDLYDEM ERNGEIVNNG SIIIPGGGGP VTESPLDQFG IHPILDLNIG KYYVSFTNLS LSMLLTLGLV LLLVFVVTKK GGGKSVPNAF QSLVELIYDF VPNLVNEQIG GLSGNVKHKF FPCISVTFTF SLFRNPQGMI PFSFTVTSHF LITLALSFSI FIGITIVGFQ RHGLHFFSFL LPAGVPLPLA PFLVLLELIS HCFRALSSGI RLFANMMAGH SSVKILSGFA WTMLFLNNIF YFLGDLGPLF IVLALTGLEL GVAISQAHVS TISICIYLND ATNLH* // ID DQ490952_13 STANDARD; PRT; 326 AA. AC DQ490952; DT Tue Jul 21 07:05:27 2009 DE Zea mays subsp. mays genotype male-fertile NA mitochondrion, OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABE98739.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 129/2 FT INTRON 157/0 FT INTRON 221/0 FT INTRON 240/2 FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 978 NT; CD 1 aCgtacatag ctgttccagc ggaaatactt tgtttaattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttttaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctcccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgcttgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatccga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga ataattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtctctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc cctgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtccggt attcccttgt CD 551 tccccgtatt ggttatgttc cttattcctc gtctagcaga aactaataga CD 601 gctccgtctg atctcccaga agcggaagct gaatcagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtctgctct tttttttttg ggagagtatg CD 701 ccaatatgat cttaatgagc ggtctatgca catcgctctt tccaggaggt CD 751 tggccgccta tcctagatct tcccatttcc aagaagatcc cttgttcgat CD 801 ctggtttagt atcaaggttc ttctttttct gtttctatat atatgggtcc CD 851 gtgctgcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtccccg tttcaggtgt CD 951 ttcagtcacc tttcgatggc tcccttaa FT EDITED CDNA CD 1 aTgtacatag ctgttccagc ggaaatactt tgtttaattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttttaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctcccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgcttgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatccga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga ataattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtctctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc cctgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtccggt attcccttgt CD 551 tccccgtatt ggttatgttc cttattcctc gtctagcaga aactaataga CD 601 gctccgtctg atctcccaga agcggaagct gaatcagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtctgctct tttttttttg ggagagtatg CD 701 ccaatatgat cttaatgagc ggtctatgca catcgctctt tccaggaggt CD 751 tggccgccta tcctagatct tcccatttcc aagaagatcc cttgttcgat CD 801 ctggtttagt atcaaggttc ttctttttct gtttctatat atatgggtcc CD 851 gtgctgcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtccccg tttcaggtgt CD 951 ttcagtcacc tttcgatggc tcccttaa SQ SEQUENCE 326 AA; MYIAVPAEIL CLILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGFKLIL KEPISPSSAN FSLFRMAPVA TFMLSLVAWA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGWSSNS KYAFLGALRS AAQMVSYEVS IGLILITVLI CVGPCNSSEI VMAQKQIWSG IPLFPVLVMF LIPRLAETNR APSDLPEAEA ESVAGYNVEY SSMGSALFFL GEYANMILMS GLCTSLFPGG WPPILDLPIS KKIPCSIWFS IKVLLFLFLY IWVRAAFPRY RYDQLMGLGR KVFLPLSLAR VVPVSGVSVT FRWLP* // ID DQ490952_15 STANDARD; PRT; 434 AA. AC DQ490952; DT Tue Jul 21 07:05:27 2009 DE Zea mays subsp. mays genotype male-fertile NA mitochondrion, OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : ccmFC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABE98717.1 FT PROTEIN_NAME : cytochrome c biogenesis FC FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 252/2 FT EDITING : 434 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1302 NT; CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatC CD 1301 ga FT EDITED CDNA CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatT CD 1301 ga SQ SEQUENCE 434 AA; MVQLQNFFFF ITSMVVPRGT AAPVLLKWFV SRDVPTGASS SNGTIIPIPI SLFPFLVYLH SRKFIRSMDR AKSGVLVKAS RPILLPDKIG RSSSARNALF RFVPVLHFLI IESMGDLSYL ESFCGLLCLQ FFRTLFSLPR DRSAKRERAL RSKGQTLRPK GNEQQNDKMR CPGHPHIERR VEGFGPVAFP APPSSSGACL GGVPPEIGLE ALALPTSRLL MAVGHDYYKK VKMNLSISHG GVCIFMLGVL LSNTNKIQFT QRLPLGPELH MGKERCCLRG LDHLHGPTSH SICGNFMIYK PSPTSERFMF EHDESLRADL LPINFPASYE NGKLEDFLMK NHEHKNFWFS MFPERRYYWS RETRSTTEVA IHTNPLTDLY APIGTGSSRT GGWYTTIMKL PFIFSIRIGF LLASSGGSRS LLRQLQKDKL HWN* // ID DQ490952_18 STANDARD; PRT; 101 AA. AC DQ490952; DT Tue Jul 21 07:05:27 2009 DE Zea mays subsp. mays genotype male-fertile NA mitochondrion, OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : nad4L FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABE98727.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 430330 - 430632 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agcaattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agcaattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDPIKYFTFS MIISILGIRG ILLNRRNILI MSMPIESMLL AVNLNFLVFS VSLDDMMGQS FASLVPTVAA AESAIGLAIF VITFRVRGTI AVEFINCIQG * // ID DQ490952_42 STANDARD; PRT; 396 AA. AC DQ490952; DT Tue Jul 21 07:05:27 2009 DE Zea mays subsp. mays genotype male-fertile NA mitochondrion, OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : atp6 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABE98712.2 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 694142 - 695329 FT DIRECTIONS : positive FT EDITING : 396 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1188 NT; CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac cctccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggcac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaatttgga CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttccatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatCaa FT EDITED CDNA CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac cctccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggcac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaatttgga CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttccatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatTaa SQ SEQUENCE 396 AA; MMMMTRWSST DMKRRNRILA NMVPIRNLSL PDYYEYEEEY PPVSREATRG VCILLRIDRY LSSIGRSIQD REVLRDFRQR LLFPQREAGH SFSEIYDDIR AHGVEASRLG QPLRDLYDEM ERNGEIVNNG SIIIPGGGGP VTESPLDQFG IHPILDLNIG KYYVSFTNLS LSMLLTLGLV LLLVFVVTKK GGGKSVPNAF QSLVELIYDF VPNLVNEQIG GLSGNVKHKF FPCISVTFTF SLFRNPQGMI PFSFTVTSHF LITLALSFSI FIGITIVGFQ RHGLHFFSFL LPAGVPLPLA PFLVLLELIS HCFRALSSGI RLFANMMAGH SSVKILSGFA WTMLFLNNIF YFLGDLGPLF IVLALTGLEL GVAISQAHVS TISICIYLND ATNLH* // ID DQ490953_26 STANDARD; PRT; 101 AA. AC DQ490953; DT Tue Jul 21 07:05:27 2009 DE Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome. OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : nad4L FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABE98773.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 348725 - 349027 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagca gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagca gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDPIKYFTFS MIISILGIRG ILLNRRNILI MSMPIESMLL AVNLNFLVFS VSLDDMMGQS FASLVPTVAA AESAIGLAIF VITFRVRGTI AVEFINCIQG * // ID DQ490953_29 STANDARD; PRT; 434 AA. AC DQ490953; DT Tue Jul 21 07:05:27 2009 DE Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome. OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : ccmFC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABE98761.1 FT PROTEIN_NAME : cytochrome c biogenesis FC FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 252/2 FT EDITING : 434 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1302 NT; CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatC CD 1301 ga FT EDITED CDNA CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatT CD 1301 ga SQ SEQUENCE 434 AA; MVQLQNFFFF ITSMVVPRGT AAPVLLKWFV SRDVPTGASS SNGTIIPIPI SLFPFLVYLH SRKFIRSMDR AKSGVLVKAS RPILLPDKIG RSSSARNALF RFVPVLHFLI IESMGDLSYL ESFCGLLCLQ FFRTLFSLPR DRSAKRERAL RSKGQTLRPK GNEQQNDKMR CPGHPHIERR VEGFGPVAFP APPSSSGACL GGVPPEIGLE ALALPTSRLL MAVGHDYYKK VKMNLSISHG GVCIFMLGVL LSNTNKIQFT QRLPLGPELH MGKERCCLRG LDHLHGPTSH SICGNFMIYK PSPTSERFMF EHDESLRADL LPINFPASYE NGKLEDFLMK NHEHKNFWFS MFPERRYYWS RETRSTTEVA IHTNPLTDLY APIGTGSSRT GGWYTTIMKL PFIFSIRIGF LLASSGGSRS LLRQLQKDKL HWN* // ID DQ490953_40 STANDARD; PRT; 396 AA. AC DQ490953; DT Tue Jul 21 07:05:27 2009 DE Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome. OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : atp6 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABE98756.2 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 528920 - 530107 FT DIRECTIONS : positive FT EDITING : 396 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1188 NT; CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac catccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggtac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaatttgga CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttctatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatCaa FT EDITED CDNA CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac catccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggtac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaatttgga CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttctatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatTaa SQ SEQUENCE 396 AA; MMMMTRWSST DMKRRNRILA NMVPIRNLSL PDYYEYEEEY HPVSREATRG VCILLRIDRY LSSIGRSIQD REVLRDFRQR LLFPQREAGY SFSEIYDDIR AHGVEASRLG QPLRDLYDEM ERNGEIVNNG SIIIPGGGGP VTESPLDQFG IHPILDLNIG KYYVSFTNLS LSMLLTLGLV LLLVFVVTKK GGGKSVPNAF QSLVELIYDF VPNLVNEQIG GLSGNVKHKF FPCISVTFTF SLFRNPQGMI PFSFTVTSHF LITLALSFSI FIGITIVGFQ RHGLHFFSFL LPAGVPLPLA PFLVLLELIS HCFRALSSGI RLFANMMAGH SSVKILSGFA WTMLFLNNIF YFLGDLGPLF IVLALTGLEL GVAISQAHVS TISICIYLND ATNLH* // ID DQ534203_1 STANDARD; PRT; 75 AA. AC DQ534203; DT Tue Jul 21 07:05:28 2009 DE Carthamus tinctorius ATPase subunit 9 (atp9) mRNA, complete cds; OS mitochondrion Carthamus tinctorius (safflower) OC Carthamus tinctorius RN [1] RL Unpublished FT Full length CDS FT GENE : atp9 FT NOTE : ATP9; component of Fo-ATPase of inner membrane FT LOCUS_TAG : FT PROTEIN_ID : ABG49445.1 FT PROTEIN_NAME : ATPase subunit 9 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 225 FT DIRECTIONS : positive FT EDITING : 17 S(tCa) -> L(tTa) FT EDITING : 27 V(gtC) -> V(gtT) FT EDITING : 28 L(Ctt) -> F(Ttt) FT EDITING : 30 S(tcC) -> S(tcT) FT EDITING : 31 S(tCg) -> L(tTg) FT EDITING : 45 S(tCa) -> L(tTa) FT EDITING : 61 S(tCg) -> L(tTg) FT EDITING : 64 P(cCa) -> L(cTa) FT EDITING : 69 L(Ctg) -> L(Ttg) FT EDITING : 71 S(tCa) -> L(tTa) FT EDITING : 72 S(tCc) -> F(tTc) FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gtgcaaaact aataggggcc ggagctgcta caattgcttC CD 51 agcgggagct gctatcggta ttggaaacgt CCttagttcC tCgattcatt CD 101 ccgtggctcg aaatccatca ttggctaaac aatCatttgg ttatgccatt CD 151 ttaggctttg ctctaaccga agctattgca tCgtttgccc Caatgatggc CD 201 ctttCtgatc tCatCcgtat tcCga FT EDITED CDNA CD 1 atgttagaag gtgcaaaact aataggggcc ggagctgcta caattgcttT CD 51 agcgggagct gctatcggta ttggaaacgt TTttagttcT tTgattcatt CD 101 ccgtggctcg aaatccatca ttggctaaac aatTatttgg ttatgccatt CD 151 ttaggctttg ctctaaccga agctattgca tTgtttgccc Taatgatggc CD 201 ctttTtgatc tTatTcgtat tcTga SQ SEQUENCE 75 AA; MLEGAKLIGA GAATIALAGA AIGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI LFVF* // ID DQ534204_1 STANDARD; PRT; 119 AA. AC DQ534204; DT Tue Jul 21 07:05:28 2009 DE Carthamus tinctorius NADH dehydrogenase subunit 3 (nad3) mRNA, OS mitochondrion Carthamus tinctorius (safflower) OC Carthamus tinctorius RN [1] RL Unpublished FT Full length CDS FT GENE : nad3 FT NOTE : NADH ubiquinone oxidoreductase subunit 3; part of FT LOCUS_TAG : FT PROTEIN_ID : ABG49446.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 357 FT DIRECTIONS : positive FT EDITING : 2 S(tCa) -> L(tTa) FT EDITING : 13 I(atC) -> I(atT) FT EDITING : 15 P(cCg) -> L(cTg) FT EDITING : 21 P(CCa) -> L(TTa) FT EDITING : 27 P(cCa) -> L(cTa) FT EDITING : 49 F(ttC) -> F(ttT) FT EDITING : 70 P(CCt) -> F(TTt) FT EDITING : 72 P(cCg) -> L(cTg) FT EDITING : 77 S(tCC) -> F(tTT) FT EDITING : 83 P(Cct) -> S(Tct) FT EDITING : 84 P(cCc) -> L(cTc) FT EDITING : 89 P(cCc) -> L(cTc) FT EDITING : 92 S(tCt) -> F(tTt) FT EDITING : 106 S(tCt) -> F(tTt) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 117 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 atgtCagaat ttgcacctat ttttatctat ttagtgatCa gtcCgctagt CD 51 ttctttgatc CCactcggtg ttccttttcC atttgcttcc aatagttcga CD 101 cctatccaga aaaattgtcg gcctacgaat gtggtttcga tcctttCggt CD 151 gatgccagaa gtcgttttga tatacgattt tatcttgttt ctattttatt CD 201 tattatcCCt gatcCggaag tcaccttttC Ctttccttgg gcagtaCctc CD 251 Ccaacaagat tgatcCcttt ggatCttggt ccatgatggc ctttttattg CD 301 attttgacga ttggatCtct ctatgaatgg aaaaggggtg cttCggatCg CD 351 ggagtaa FT EDITED CDNA CD 1 atgtTagaat ttgcacctat ttttatctat ttagtgatTa gtcTgctagt CD 51 ttctttgatc TTactcggtg ttccttttcT atttgcttcc aatagttcga CD 101 cctatccaga aaaattgtcg gcctacgaat gtggtttcga tcctttTggt CD 151 gatgccagaa gtcgttttga tatacgattt tatcttgttt ctattttatt CD 201 tattatcTTt gatcTggaag tcaccttttT Ttttccttgg gcagtaTctc CD 251 Tcaacaagat tgatcTcttt ggatTttggt ccatgatggc ctttttattg CD 301 attttgacga ttggatTtct ctatgaatgg aaaaggggtg cttTggatTg CD 351 ggagtaa SQ SEQUENCE 119 AA; MLEFAPIFIY LVISLLVSLI LLGVPFLFAS NSSTYPEKLS AYECGFDPFG DARSRFDIRF YLVSILFIIF DLEVTFFFPW AVSLNKIDLF GFWSMMAFLL ILTIGFLYEW KRGALDWE* // ID DQ539623_1 STANDARD; PRT; 119 AA. AC DQ539623; DT Tue Jul 21 07:05:28 2009 DE Carthamus tinctorius NADH dehydrogenase subunit 3 (nad3) gene, OS mitochondrion Carthamus tinctorius (safflower) OC Carthamus tinctorius RN [1] RL Unpublished FT Full length CDS FT GENE : nad3 FT NOTE : NADH ubiquinone oxidoreductase subunit 3; part of FT LOCUS_TAG : FT PROTEIN_ID : ABG66727.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 357 FT DIRECTIONS : positive FT EDITING : 2 S(tCa) -> L(tTa) FT EDITING : 13 I(atC) -> I(atT) FT EDITING : 15 P(cCg) -> L(cTg) FT EDITING : 21 P(CCa) -> L(TTa) FT EDITING : 27 P(cCa) -> L(cTa) FT EDITING : 49 F(ttC) -> F(ttT) FT EDITING : 70 P(CCt) -> F(TTt) FT EDITING : 72 P(cCg) -> L(cTg) FT EDITING : 77 S(tCC) -> F(tTT) FT EDITING : 83 P(Cct) -> S(Tct) FT EDITING : 84 P(cCc) -> L(cTc) FT EDITING : 89 P(cCc) -> L(cTc) FT EDITING : 92 S(tCt) -> F(tTt) FT EDITING : 106 S(tCt) -> F(tTt) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 117 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 atgtCagaat ttgcacctat ttttatctat ttagtgatCa gtcCgctagt CD 51 ttctttgatc CCactcggtg ttccttttcC atttgcttcc aatagttcga CD 101 cctatccaga aaaattgtcg gcctacgaat gtggtttcga tcctttCggt CD 151 gatgccagaa gtcgttttga tatacgattt tatcttgttt ctattttatt CD 201 tattatcCCt gatcCggaag tcaccttttC Ctttccttgg gcagtaCctc CD 251 Ccaacaagat tgatcCcttt ggatCttggt ccatgatggc ctttttattg CD 301 attttgacga ttggatCtct ctatgaatgg aaaaggggtg cttCggatCg CD 351 ggagtaa FT EDITED CDNA CD 1 atgtTagaat ttgcacctat ttttatctat ttagtgatTa gtcTgctagt CD 51 ttctttgatc TTactcggtg ttccttttcT atttgcttcc aatagttcga CD 101 cctatccaga aaaattgtcg gcctacgaat gtggtttcga tcctttTggt CD 151 gatgccagaa gtcgttttga tatacgattt tatcttgttt ctattttatt CD 201 tattatcTTt gatcTggaag tcaccttttT Ttttccttgg gcagtaTctc CD 251 Tcaacaagat tgatcTcttt ggatTttggt ccatgatggc ctttttattg CD 301 attttgacga ttggatTtct ctatgaatgg aaaaggggtg cttTggatTg CD 351 ggagtaa SQ SEQUENCE 119 AA; MLEFAPIFIY LVISLLVSLI LLGVPFLFAS NSSTYPEKLS AYECGFDPFG DARSRFDIRF YLVSILFIIF DLEVTFFFPW AVSLNKIDLF GFWSMMAFLL ILTIGFLYEW KRGALDWE* // ID DQ539624_1 STANDARD; PRT; 87 AA. AC DQ539624; DT Tue Jul 21 07:05:28 2009 DE Carthamus tinctorius ATP synthase subunit 9 (atp9) gene, complete OS mitochondrion Carthamus tinctorius (safflower) OC Carthamus tinctorius RN [1] RL Unpublished FT Full length CDS FT GENE : atp9 FT NOTE : component of Fo-ATPase of inner membrane proton FT LOCUS_TAG : FT PROTEIN_ID : ABG66728.1 FT PROTEIN_NAME : ATP synthase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 261 FT DIRECTIONS : positive FT EDITING : 17 S(tCa) -> L(tTa) FT EDITING : 27 V(gtC) -> V(gtT) FT EDITING : 28 L(Ctt) -> F(Ttt) FT EDITING : 30 S(tcC) -> S(tcT) FT EDITING : 31 S(tCg) -> L(tTg) FT EDITING : 45 S(tCa) -> L(tTa) FT EDITING : 61 S(tCg) -> L(tTg) FT EDITING : 64 P(cCa) -> L(cTa) FT EDITING : 69 L(Ctg) -> L(Ttg) FT EDITING : 71 S(tCa) -> L(tTa) FT EDITING : 72 S(tCc) -> F(tTc) FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 261 NT; CD 1 atgttagaag gtgcaaaact aataggggcc ggagctgcta caattgcttC CD 51 agcgggagct gctatcggta ttggaaacgt CCttagttcC tCgattcatt CD 101 ccgtggctcg aaatccatca ttggctaaac aatCatttgg ttatgccatt CD 151 ttaggctttg ctctaaccga agctattgca tCgtttgccc Caatgatggc CD 201 ctttCtgatc tCatCcgtat tcCgatcaaa gaatcaaaga aagaaggttg CD 251 aagtttcata a FT EDITED CDNA CD 1 atgttagaag gtgcaaaact aataggggcc ggagctgcta caattgcttT CD 51 agcgggagct gctatcggta ttggaaacgt TTttagttcT tTgattcatt CD 101 ccgtggctcg aaatccatca ttggctaaac aatTatttgg ttatgccatt CD 151 ttaggctttg ctctaaccga agctattgca tTgtttgccc Taatgatggc CD 201 ctttTtgatc tTatTcgtat tcTgatcaaa gaatcaaaga aagaaggttg CD 251 aagtttcata a SQ SEQUENCE 87 AA; MLEGAKLIGA GAATIALAGA AIGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI LFVF*SKNQR KKVEVS* // ID DQ645536_8 STANDARD; PRT; 101 AA. AC DQ645536; DT Tue Jul 21 07:05:33 2009 DE Zea mays subsp. mays genotype CMS-C mitochondrion, complete genome. OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : nad4L-1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABF70924.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 85809 - 86111 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDPIKYFTFS MIISILGIRG ILLNRRNILI MSMPIESMLL AVNLNFLVFS VSLDDMMGQS FASLVPTVAA AESAIGLAIF VITFRVRGTI AVEFINCIQG * // ID DQ645536_21 STANDARD; PRT; 326 AA. AC DQ645536; DT Tue Jul 21 07:05:33 2009 DE Zea mays subsp. mays genotype CMS-C mitochondrion, complete genome. OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABF70937.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 129/2 FT INTRON 157/0 FT INTRON 221/0 FT INTRON 240/2 FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 978 NT; CD 1 aCgtacatag ctgttccagc ggaaatactt tgtttaattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttttaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctcccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgcttgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatccga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga ataattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtctctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc cctgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtccggt attcccttgt CD 551 tccccgtatt ggttatgttc cttattcctc gtctagcaga aactaataga CD 601 gctccgtctg atctcccaga agcggaagct gaatcagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtctgctct tttttttttg ggagagtatg CD 701 ccaatatgat cttaatgagc ggtctatgca catcgctctt tccaggaggt CD 751 tggccgccta tcctagatct tcccatttcc aagaagatcc cttgttcgat CD 801 ctggtttagt atcaaggttc ttctttttct gtttctatat atatgggtcc CD 851 gtgctgcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtccccg tttcaggtgt CD 951 ttcagtcacc tttcgatggc tcccttaa FT EDITED CDNA CD 1 aTgtacatag ctgttccagc ggaaatactt tgtttaattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttttaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctcccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgcttgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatccga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga ataattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtctctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc cctgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtccggt attcccttgt CD 551 tccccgtatt ggttatgttc cttattcctc gtctagcaga aactaataga CD 601 gctccgtctg atctcccaga agcggaagct gaatcagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtctgctct tttttttttg ggagagtatg CD 701 ccaatatgat cttaatgagc ggtctatgca catcgctctt tccaggaggt CD 751 tggccgccta tcctagatct tcccatttcc aagaagatcc cttgttcgat CD 801 ctggtttagt atcaaggttc ttctttttct gtttctatat atatgggtcc CD 851 gtgctgcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtccccg tttcaggtgt CD 951 ttcagtcacc tttcgatggc tcccttaa SQ SEQUENCE 326 AA; MYIAVPAEIL CLILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGFKLIL KEPISPSSAN FSLFRMAPVA TFMLSLVAWA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGWSSNS KYAFLGALRS AAQMVSYEVS IGLILITVLI CVGPCNSSEI VMAQKQIWSG IPLFPVLVMF LIPRLAETNR APSDLPEAEA ESVAGYNVEY SSMGSALFFL GEYANMILMS GLCTSLFPGG WPPILDLPIS KKIPCSIWFS IKVLLFLFLY IWVRAAFPRY RYDQLMGLGR KVFLPLSLAR VVPVSGVSVT FRWLP* // ID DQ645536_24 STANDARD; PRT; 434 AA. AC DQ645536; DT Tue Jul 21 07:05:33 2009 DE Zea mays subsp. mays genotype CMS-C mitochondrion, complete genome. OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : ccmFC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABF70914.1 FT PROTEIN_NAME : cytochrome c biogenesis FC FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 252/2 FT EDITING : 434 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1302 NT; CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatC CD 1301 ga FT EDITED CDNA CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatT CD 1301 ga SQ SEQUENCE 434 AA; MVQLQNFFFF ITSMVVPRGT AAPVLLKWFV SRDVPTGASS SNGTIIPIPI SLFPFLVYLH SRKFIRSMDR AKSGVLVKAS RPILLPDKIG RSSSARNALF RFVPVLHFLI IESMGDLSYL ESFCGLLCLQ FFRTLFSLPR DRSAKRERAL RSKGQTLRPK GNEQQNDKMR CPGHPHIERR VEGFGPVAFP APPSSSGACL GGVPPEIGLE ALALPTSRLL MAVGHDYYKK VKMNLSISHG GVCIFMLGVL LSNTNKIQFT QRLPLGPELH MGKERCCLRG LDHLHGPTSH SICGNFMIYK PSPTSERFMF EHDESLRADL LPINFPASYE NGKLEDFLMK NHEHKNFWFS MFPERRYYWS RETRSTTEVA IHTNPLTDLY APIGTGSSRT GGWYTTIMKL PFIFSIRIGF LLASSGGSRS LLRQLQKDKL HWN* // ID DQ645536_39 STANDARD; PRT; 415 AA. AC DQ645536; DT Tue Jul 21 07:05:33 2009 DE Zea mays subsp. mays genotype CMS-C mitochondrion, complete genome. OS mitochondrion Zea mays subsp. mays (maize) OC Zea mays subsp. mays RN [1] RL Genetics 177 (2), 1173-1192 (2007) RL PUBMED 17660568 FT Full length CDS FT GENE : atp6 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABF70909.2 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 732766 - 734010 FT DIRECTIONS : positive FT EDITING : 415 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1245 NT; CD 1 atgttagaag gagcgaaatc aataggtgct ggagctgctg ttagaacgat CD 51 gactgaagga tcttctaata caagtaatgc taatggtgtt ccgattccga CD 101 ttccgggttc aactgggatt tatgaggacc acccaggtct gcacccggcc CD 151 gtcgatgaaa gggtggtgga atatcaagcc ggtataaggg agcaaatgag CD 201 tgaattaatg aggatggacg gggagcaccc cgaagttgtg gcagccgccg CD 251 aacgtgtgca tggagaaagc gataatatcg cttttttgca agggctgctc CD 301 gaggatttaa gggcacatgg aagagaaagt gaagctttca agtacggagt CD 351 gccgaatgac gctcctcttc ctggaggagg aaacccagcg ggaagctcag CD 401 gaggagttga cctagcgaat ggaaatgagg cggggagttc cgcaggagtt CD 451 gacctagcga atgtggatga tgctgcagca gcagaaagcc cattggatca CD 501 atttggaatt cacccaattc tggatctgaa tattggtgag tactatgtct CD 551 cattcacaaa tctatccttg tctatgctac tcactctcgg tttggtccta CD 601 cttctggttt ttgttgttac gaaaaaagga gggggaaagt cagtgccaaa CD 651 tgcatttcaa tccttggtgg agcttattta tgatttcgtg ccgaacctgg CD 701 taaacgaaca aataggtggt ctttccggaa atgtgaaaca caagtttttc CD 751 ccttgcatct cggtcacttt tactttttcg ttatttcgta atccccaggg CD 801 tatgataccc tttagcttca cagtgacaag tcattttctc attactttgg CD 851 ctctttcatt ttccattttt ataggcatta cgatcgttgg atttcaaaga CD 901 catgggcttc atttttttag cttcttatta ccagcgggag tcccactgcc CD 951 attagcacct tttttagtac tccttgagct aatctctcat tgttttcgtg CD 1001 cattaagctc aggaatacgt ttatttgcta atatgatggc cggtcatagt CD 1051 tcagtaaaga ttttaagtgg gtttgcttgg actatgctat ttctgaataa CD 1101 tattttctat ttcttaggag atcttggtcc cttatttata gttctagcat CD 1151 taaccggtct ggaattaggt gtagctatat cacaagctca tgtttctacg CD 1201 atctcaattt gtatttactt gaatgatgct acaaatctcc atCaa FT EDITED CDNA CD 1 atgttagaag gagcgaaatc aataggtgct ggagctgctg ttagaacgat CD 51 gactgaagga tcttctaata caagtaatgc taatggtgtt ccgattccga CD 101 ttccgggttc aactgggatt tatgaggacc acccaggtct gcacccggcc CD 151 gtcgatgaaa gggtggtgga atatcaagcc ggtataaggg agcaaatgag CD 201 tgaattaatg aggatggacg gggagcaccc cgaagttgtg gcagccgccg CD 251 aacgtgtgca tggagaaagc gataatatcg cttttttgca agggctgctc CD 301 gaggatttaa gggcacatgg aagagaaagt gaagctttca agtacggagt CD 351 gccgaatgac gctcctcttc ctggaggagg aaacccagcg ggaagctcag CD 401 gaggagttga cctagcgaat ggaaatgagg cggggagttc cgcaggagtt CD 451 gacctagcga atgtggatga tgctgcagca gcagaaagcc cattggatca CD 501 atttggaatt cacccaattc tggatctgaa tattggtgag tactatgtct CD 551 cattcacaaa tctatccttg tctatgctac tcactctcgg tttggtccta CD 601 cttctggttt ttgttgttac gaaaaaagga gggggaaagt cagtgccaaa CD 651 tgcatttcaa tccttggtgg agcttattta tgatttcgtg ccgaacctgg CD 701 taaacgaaca aataggtggt ctttccggaa atgtgaaaca caagtttttc CD 751 ccttgcatct cggtcacttt tactttttcg ttatttcgta atccccaggg CD 801 tatgataccc tttagcttca cagtgacaag tcattttctc attactttgg CD 851 ctctttcatt ttccattttt ataggcatta cgatcgttgg atttcaaaga CD 901 catgggcttc atttttttag cttcttatta ccagcgggag tcccactgcc CD 951 attagcacct tttttagtac tccttgagct aatctctcat tgttttcgtg CD 1001 cattaagctc aggaatacgt ttatttgcta atatgatggc cggtcatagt CD 1051 tcagtaaaga ttttaagtgg gtttgcttgg actatgctat ttctgaataa CD 1101 tattttctat ttcttaggag atcttggtcc cttatttata gttctagcat CD 1151 taaccggtct ggaattaggt gtagctatat cacaagctca tgtttctacg CD 1201 atctcaattt gtatttactt gaatgatgct acaaatctcc atTaa SQ SEQUENCE 415 AA; MLEGAKSIGA GAAVRTMTEG SSNTSNANGV PIPIPGSTGI YEDHPGLHPA VDERVVEYQA GIREQMSELM RMDGEHPEVV AAAERVHGES DNIAFLQGLL EDLRAHGRES EAFKYGVPND APLPGGGNPA GSSGGVDLAN GNEAGSSAGV DLANVDDAAA AESPLDQFGI HPILDLNIGE YYVSFTNLSL SMLLTLGLVL LLVFVVTKKG GGKSVPNAFQ SLVELIYDFV PNLVNEQIGG LSGNVKHKFF PCISVTFTFS LFRNPQGMIP FSFTVTSHFL ITLALSFSIF IGITIVGFQR HGLHFFSFLL PAGVPLPLAP FLVLLELISH CFRALSSGIR LFANMMAGHS SVKILSGFAW TMLFLNNIFY FLGDLGPLFI VLALTGLELG VAISQAHVST ISICIYLNDA TNLH* // ID DQ645537_2 STANDARD; PRT; 396 AA. AC DQ645537; DT Tue Jul 21 07:05:33 2009 DE Zea luxurians mitochondrion, complete genome. OS mitochondrion Zea luxurians OC Zea luxurians RN [1] RL Unpublished FT Full length CDS FT GENE : atp6 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABG65635.2 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1986 - 3173 FT DIRECTIONS : positive FT EDITING : 396 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1188 NT; CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac aatccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggtac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaattttcc CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttccatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatCaa FT EDITED CDNA CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac aatccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggtac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaattttcc CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttccatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatTaa SQ SEQUENCE 396 AA; MMMMTRWSST DMKRRNRILA NMVPIRNLSL PDYYEYEEEY NPVSREATRG VCILLRIDRY LSSIGRSIQD REVLRDFRQR LLFPQREAGY SFSEIYDDIR AHGVEASRLG QPLRDLYDEM ERNGEIVNNG SIIIPGGGGP VTESPLDQFS IHPILDLNIG KYYVSFTNLS LSMLLTLGLV LLLVFVVTKK GGGKSVPNAF QSLVELIYDF VPNLVNEQIG GLSGNVKHKF FPCISVTFTF SLFRNPQGMI PFSFTVTSHF LITLALSFSI FIGITIVGFQ RHGLHFFSFL LPAGVPLPLA PFLVLLELIS HCFRALSSGI RLFANMMAGH SSVKILSGFA WTMLFLNNIF YFLGDLGPLF IVLALTGLEL GVAISQAHVS TISICIYLND ATNLH* // ID DQ645537_6 STANDARD; PRT; 326 AA. AC DQ645537; DT Tue Jul 21 07:05:33 2009 DE Zea luxurians mitochondrion, complete genome. OS mitochondrion Zea luxurians OC Zea luxurians RN [1] RL Unpublished FT Full length CDS FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABG65647.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 129/2 FT INTRON 157/0 FT INTRON 221/0 FT INTRON 240/2 FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 978 NT; CD 1 aCgtacatag ctgttccagc ggaaatactt tgtttaattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttttaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctcccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgcttgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatccga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga ataattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtctctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc cctgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtccggt attcccttgt CD 551 tccccgtatt ggttatgttc cttattcctc gtctagcaga aactaataga CD 601 gctccgtctg atctcccaga agcggaagct gaatcagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtctgctct tttttttttg ggagagtatg CD 701 ccaatatgat cttaatgagc ggtctatgca catcgctctt tccaggaggt CD 751 tggccgccta tcctagatct tcccatttcc aagaagatcc cttgttcgat CD 801 ctggtttagt atcaaggttc ttctttttct gtttctatat atatgggtcc CD 851 gtgctgcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtccccg tttcaggtgt CD 951 ttcagtcacc tttcgatggc tcccttaa FT EDITED CDNA CD 1 aTgtacatag ctgttccagc ggaaatactt tgtttaattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttttaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctcccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgcttgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatccga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga ataattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtctctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc cctgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtccggt attcccttgt CD 551 tccccgtatt ggttatgttc cttattcctc gtctagcaga aactaataga CD 601 gctccgtctg atctcccaga agcggaagct gaatcagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtctgctct tttttttttg ggagagtatg CD 701 ccaatatgat cttaatgagc ggtctatgca catcgctctt tccaggaggt CD 751 tggccgccta tcctagatct tcccatttcc aagaagatcc cttgttcgat CD 801 ctggtttagt atcaaggttc ttctttttct gtttctatat atatgggtcc CD 851 gtgctgcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtccccg tttcaggtgt CD 951 ttcagtcacc tttcgatggc tcccttaa SQ SEQUENCE 326 AA; MYIAVPAEIL CLILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGFKLIL KEPISPSSAN FSLFRMAPVA TFMLSLVAWA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGWSSNS KYAFLGALRS AAQMVSYEVS IGLILITVLI CVGPCNSSEI VMAQKQIWSG IPLFPVLVMF LIPRLAETNR APSDLPEAEA ESVAGYNVEY SSMGSALFFL GEYANMILMS GLCTSLFPGG WPPILDLPIS KKIPCSIWFS IKVLLFLFLY IWVRAAFPRY RYDQLMGLGR KVFLPLSLAR VVPVSGVSVT FRWLP* // ID DQ645537_9 STANDARD; PRT; 101 AA. AC DQ645537; DT Tue Jul 21 07:05:33 2009 DE Zea luxurians mitochondrion, complete genome. OS mitochondrion Zea luxurians OC Zea luxurians RN [1] RL Unpublished FT Full length CDS FT GENE : nad4L FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABG65651.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 119552 - 119854 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDPIKYFTFS MIISILGIRG ILLNRRNILI MSMPIESMLL AVNLNFLVFS VSLDDMMGQS FASLVPTVAA AESAIGLAIF VITFRVRGTI AVEFINCIQG * // ID DQ645538_2 STANDARD; PRT; 396 AA. AC DQ645538; DT Tue Jul 21 07:05:33 2009 DE Zea perennis mitochondrion, complete genome. OS mitochondrion Zea perennis OC Zea perennis RN [1] RL Unpublished FT Full length CDS FT GENE : atp6-1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABF70811.2 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1997 - 3184 FT DIRECTIONS : positive FT EDITING : 396 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1188 NT; CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac catccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggtac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaattttcc CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttccatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatCaa FT EDITED CDNA CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac catccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggtac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaattttcc CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttccatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatTaa SQ SEQUENCE 396 AA; MMMMTRWSST DMKRRNRILA NMVPIRNLSL PDYYEYEEEY HPVSREATRG VCILLRIDRY LSSIGRSIQD REVLRDFRQR LLFPQREAGY SFSEIYDDIR AHGVEASRLG QPLRDLYDEM ERNGEIVNNG SIIIPGGGGP VTESPLDQFS IHPILDLNIG KYYVSFTNLS LSMLLTLGLV LLLVFVVTKK GGGKSVPNAF QSLVELIYDF VPNLVNEQIG GLSGNVKHKF FPCISVTFTF SLFRNPQGMI PFSFTVTSHF LITLALSFSI FIGITIVGFQ RHGLHFFSFL LPAGVPLPLA PFLVLLELIS HCFRALSSGI RLFANMMAGH SSVKILSGFA WTMLFLNNIF YFLGDLGPLF IVLALTGLEL GVAISQAHVS TISICIYLND ATNLH* // ID DQ645538_11 STANDARD; PRT; 101 AA. AC DQ645538; DT Tue Jul 21 07:05:33 2009 DE Zea perennis mitochondrion, complete genome. OS mitochondrion Zea perennis OC Zea perennis RN [1] RL Unpublished FT Full length CDS FT GENE : nad4L FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABF70828.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 141863 - 142165 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDPIKYFTFS MIISILGIRG ILLNRRNILI MSMPIESMLL AVNLNFLVFS VSLDDMMGQS FASLVPTVAA AESAIGLAIF VITFRVRGTI AVEFINCIQG * // ID DQ645538_24 STANDARD; PRT; 434 AA. AC DQ645538; DT Tue Jul 21 07:05:33 2009 DE Zea perennis mitochondrion, complete genome. OS mitochondrion Zea perennis OC Zea perennis RN [1] RL Unpublished FT Full length CDS FT GENE : ccmFC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABF70816.1 FT PROTEIN_NAME : cytochrome c biogenesis FC FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 252/2 FT EDITING : 434 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1302 NT; CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatC CD 1301 ga FT EDITED CDNA CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatT CD 1301 ga SQ SEQUENCE 434 AA; MVQLQNFFFF ITSMVVPRGT AAPVLLKWFV SRDVPTGASS SNGTIIPIPI SLFPFLVYLH SRKFIRSMDR AKSGVLVKAS RPILLPDKIG RSSSARNALF RFVPVLHFLI IESMGDLSYL ESFCGLLCLQ FFRTLFSLPR DRSAKRERAL RSKGQTLRPK GNEQQNDKMR CPGHPHIERR VEGFGPVAFP APPSSSGACL GGVPPEIGLE ALALPTSRLL MAVGHDYYKK VKMNLSISHG GVCIFMLGVL LSNTNKIQFT QRLPLGPELH MGKERCCLRG LDHLHGPTSH SICGNFMIYK PSPTSERFMF EHDESLRADL LPINFPASYE NGKLEDFLMK NHEHKNFWFS MFPERRYYWS RETRSTTEVA IHTNPLTDLY APIGTGSSRT GGWYTTIMKL PFIFSIRIGF LLASSGGSRS LLRQLQKDKL HWN* // ID DQ645539_16 STANDARD; PRT; 101 AA. AC DQ645539; DT Tue Jul 21 07:05:33 2009 DE Zea mays subsp. parviglumis mitochondrion, complete genome. OS mitochondrion Zea mays subsp. parviglumis OC Zea mays subsp. parviglumis RN [1] RL Unpublished FT Full length CDS FT GENE : nad4L FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABF70860.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 170854 - 171156 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agcaattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agcaattttc gttattactt CD 251 ttagagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDPIKYFTFS MIISILGIRG ILLNRRNILI MSMPIESMLL AVNLNFLVFS VSLDDMMGQS FASLVPTVAA AESAIGLAIF VITFRVRGTI AVEFINCIQG * // ID DQ645539_19 STANDARD; PRT; 434 AA. AC DQ645539; DT Tue Jul 21 07:05:33 2009 DE Zea mays subsp. parviglumis mitochondrion, complete genome. OS mitochondrion Zea mays subsp. parviglumis OC Zea mays subsp. parviglumis RN [1] RL Unpublished FT Full length CDS FT GENE : ccmFC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABF70848.1 FT PROTEIN_NAME : cytochrome c biogenesis FC FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 252/2 FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 1302 NT; CD 1 aCggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatc CD 1301 ga FT EDITED CDNA CD 1 aTggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatc CD 1301 ga SQ SEQUENCE 434 AA; MVQLQNFFFF ITSMVVPRGT AAPVLLKWFV SRDVPTGASS SNGTIIPIPI SLFPFLVYLH SRKFIRSMDR AKSGVLVKAS RPILLPDKIG RSSSARNALF RFVPVLHFLI IESMGDLSYL ESFCGLLCLQ FFRTLFSLPR DRSAKRERAL RSKGQTLRPK GNEQQNDKMR CPGHPHIERR VEGFGPVAFP APPSSSGACL GGVPPEIGLE ALALPTSRLL MAVGHDYYKK VKMNLSISHG GVCIFMLGVL LSNTNKIQFT QRLPLGPELH MGKERCCLRG LDHLHGPTSH SICGNFMIYK PSPTSERFMF EHDESLRADL LPINFPASYE NGKLEDFLMK NHEHKNFWFS MFPERRYYWS RETRSTTEVA IHTNPLTDLY APIGTGSSRT GGWYTTIMKL PFIFSIRIGF LLASSGGSRS LLRQLQKDKL HWNR // ID DQ645539_41 STANDARD; PRT; 396 AA. AC DQ645539; DT Tue Jul 21 07:05:33 2009 DE Zea mays subsp. parviglumis mitochondrion, complete genome. OS mitochondrion Zea mays subsp. parviglumis OC Zea mays subsp. parviglumis RN [1] RL Unpublished FT Full length CDS FT GENE : atp6 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABF70843.2 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 673699 - 674886 FT DIRECTIONS : positive FT EDITING : 396 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1188 NT; CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac cctccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggcac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaatttgga CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttccatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatCaa FT EDITED CDNA CD 1 atgatgatga tgactagatg gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta cctgattatt CD 101 atgaatatga agaagaatac cctccagttt caagagaggc aaccagaggg CD 151 gtctgtatac tcctacgaat agacagatat ttatcttcaa ttggaaggag CD 201 cattcaagac cgtgaggttc tacgcgattt ccgccaacgg ttactctttc CD 251 cccaacgcga ggctgggcac agcttttccg aaatatatga tgatatacga CD 301 gcgcatgggg tagaagcaag tcgattgggt cagcctctaa gagatctgta CD 351 cgatgagatg gaaaggaacg gcgagatagt aaataacggc tcaatcatta CD 401 tccctggagg cggcggacca gtaacagaaa gcccattgga tcaatttgga CD 451 attcacccaa ttctggatct gaatattggc aagtactatg tctcattcac CD 501 aaatctatcc ttgtctatgc tactcactct cggtttggtc ctacttctgg CD 551 tttttgttgt tacgaaaaaa ggagggggaa agtcagtgcc aaatgcattt CD 601 caatccttgg tggagcttat ttatgatttc gtgccgaacc tggtaaacga CD 651 acaaataggt ggtctttccg gaaatgtgaa acacaagttt ttcccttgca CD 701 tctcggtcac ttttactttt tcgttatttc gtaatcccca gggtatgata CD 751 ccctttagct tcacagtgac aagtcatttt ctcattactt tggctctttc CD 801 attttccatt tttataggca ttacgatcgt tggatttcaa agacatgggc CD 851 ttcatttttt tagcttctta ttaccagcgg gagtcccact gccattagca CD 901 ccttttttag tactccttga gctaatctct cattgttttc gtgcattaag CD 951 ctcaggaata cgtttatttg ctaatatgat ggccggtcat agttcagtaa CD 1001 agattttaag tgggtttgct tggactatgc tatttctgaa taatattttc CD 1051 tatttcttag gagatcttgg tcccttattt atagttctag cattaaccgg CD 1101 tctggaatta ggtgtagcta tatcacaagc tcatgtttct acgatctcaa CD 1151 tttgtattta cttgaatgat gctacaaatc tccatTaa SQ SEQUENCE 396 AA; MMMMTRWSST DMKRRNRILA NMVPIRNLSL PDYYEYEEEY PPVSREATRG VCILLRIDRY LSSIGRSIQD REVLRDFRQR LLFPQREAGH SFSEIYDDIR AHGVEASRLG QPLRDLYDEM ERNGEIVNNG SIIIPGGGGP VTESPLDQFG IHPILDLNIG KYYVSFTNLS LSMLLTLGLV LLLVFVVTKK GGGKSVPNAF QSLVELIYDF VPNLVNEQIG GLSGNVKHKF FPCISVTFTF SLFRNPQGMI PFSFTVTSHF LITLALSFSI FIGITIVGFQ RHGLHFFSFL LPAGVPLPLA PFLVLLELIS HCFRALSSGI RLFANMMAGH SSVKILSGFA WTMLFLNNIF YFLGDLGPLF IVLALTGLEL GVAISQAHVS TISICIYLND ATNLH* // ID DQ677483_1 STANDARD; PRT; 33 AA. AC DQ677483; DT Tue Jul 21 07:05:33 2009 DE Asplenium nidus cytochrome c oxidase subunit 2 (cox2) gene, partial OS mitochondrion Asplenium nidus (bird's-nest fern) OC Asplenium nidus RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 103 (42), 15511-15516 (2006) RL PUBMED 17030812 FT N-terminal not determined FT C-terminal not determined FT GENE : cox2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABH11737.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 20/2 FT EDITING : 16 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 98 NT; CD 1 cgaggtagta gtagatccag ccattactat taaagctatt ggacatTaac CD 51 ggtatcggac ttatgagtat tcagactata acagttcyga tgaacagt FT EDITED CDNA CD 1 cgaggtagta gtagatccag ccattactat taaagctatt ggacatCaac CD 51 ggtatcggac ttatgagtat tcagactata acagttcyga tgaacagt SQ SEQUENCE 33 AA; EVVVDPAITI KAIGHQRYRT YEYSDYNSXD EQX // ID DQ677485_1 STANDARD; PRT; 141 AA. AC DQ677485; DT Tue Jul 21 07:05:33 2009 DE Haplomitrium mnioides cytochrome c oxidase subunit 2 (cox2) gene, OS mitochondrion Haplomitrium mnioides OC Haplomitrium mnioides RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 103 (42), 15511-15516 (2006) RL PUBMED 17030812 FT N-terminal not determined FT C-terminal not determined FT GENE : cox2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABH11739.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 424 FT DIRECTIONS : positive FT EDITING : 86 *(Tag) -> Q(Cag) FT EDITING : 88 *(Tga) -> R(Cga) FT EDITING : 97 *(Tga) -> R(Cga) FT CODON_START : 2 CL CDNALEN 424 NT; CD 1 cgaggtagta gtagatccag ctattactac caaagctatt ggacatcaac CD 51 ggtatcggac tcatgagtat ccagactata acagttctga tgaacagtca CD 101 ccaacttccg acagttatat gattccagag gatgattcag aatcgggtca CD 151 atcacgttta ttagaagtgg acaatcgagt ggttgtacca gcaaaaactc CD 201 atccacgtac gattatactc ctgctgatgt acctcatagt ygggctgtac CD 251 cttcycTagg tgTgaaacgt gatgctgtac ctggtcgttT gaatcagact CD 301 tccattttca ttaaacgagg aggtgtttac tacggccagt gcagtgaaat CD 351 ttgtggaact aatcatgcct ttatgcctat tgtcgcagag gctgtttcct CD 401 cggatgatca cgtttctcgg gtat FT EDITED CDNA CD 1 cgaggtagta gtagatccag ctattactac caaagctatt ggacatcaac CD 51 ggtatcggac tcatgagtat ccagactata acagttctga tgaacagtca CD 101 ccaacttccg acagttatat gattccagag gatgattcag aatcgggtca CD 151 atcacgttta ttagaagtgg acaatcgagt ggttgtacca gcaaaaactc CD 201 atccacgtac gattatactc ctgctgatgt acctcatagt ygggctgtac CD 251 cttcycCagg tgCgaaacgt gatgctgtac ctggtcgttC gaatcagact CD 301 tccattttca ttaaacgagg aggtgtttac tacggccagt gcagtgaaat CD 351 ttgtggaact aatcatgcct ttatgcctat tgtcgcagag gctgtttcct CD 401 cggatgatca cgtttctcgg gtat SQ SEQUENCE 141 AA; EVVVDPAITT KAIGHQRYRT HEYPDYNSSD EQSPTSDSYM IPEDDSESGQ SRLLEVDNRV VVPAKTHPRT IILLLMYLIX GLYLXQVRNV MLYLVVRIRL PFSLNEEVFT TASAVKFVEL IMPLCLLSQR LFPRMITFLG Y // ID DQ984517_15 STANDARD; PRT; 395 AA. AC DQ984517; DT Tue Jul 21 07:05:36 2009 DE Tripsacum dactyloides cultivar Pete mitochondrion, complete genome. OS mitochondrion Tripsacum dactyloides (gama grass) OC Tripsacum dactyloides RN [1] RL Unpublished FT Full length CDS FT GENE : atp6-1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABI74638.2 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 189758 - 190942 FT DIRECTIONS : positive FT EDITING : 395 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1185 NT; CD 1 atgatgatga tgactagatt gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta ccttatgaat CD 101 atgaattagc tgaagaagaa tacaatccag tagaggcaac cagaggggtc CD 151 tgtatactcc tacgaataga cagatattta tctgaaattg gaaggcgcat CD 201 tccagaccgt gaggttctac gcgatttccg ccaacggtta ctctttcccc CD 251 aacgcgaggc tgggtacagc ttttccgaaa tatatgatga tatacgagcg CD 301 catggggtag gagcaagtcg attgggtcag cctctaagag atctgtacga CD 351 tgagatggaa aggaacggcg agatagtaaa taacggctca atcattatcc CD 401 ctggaggcgg cggaccagta acagaaagcc cattggatca atttggaatt CD 451 cacccaattc tggatctgaa tattggcaag tactatgtct cattcacaaa CD 501 tctatccttg tctatgctac tcactctcgg tttggtccta cttctggttt CD 551 ttgttgttac gaaaaaagga gggggaaagt cagtgccaaa tgcatggcaa CD 601 tccttggtgg agcttattta tgatttcgtg ccgaacctgg taaacgaaca CD 651 aataggtggt ctttccggaa atgtgaaaca caagtttttc ccttgcatct CD 701 cggtcacttt tactttttcg ttatttcgta atccccaggg tatgataccc CD 751 tttagcttca cagtgacaag tcattttctc attactttgg ctctttcatt CD 801 ttccattttt ataggcatta cgatcgttgg atttcaaaga catgggcttc CD 851 atttttttag cttcttatta ccagcgggag tcccactgcc attagcacct CD 901 tttttagtac tccttgagct aatctctcat tgttttcgtg cattaagctc CD 951 aggaatacgt ttatttgcta atatgatggc cggtcatagt tcagtaaaga CD 1001 ttttaagtgg gtttgcttgg actatgctat ttctgaataa tattttctat CD 1051 ttcttaggag atcttggtcc cttatttata gttctagcat taaccggtct CD 1101 ggaattaggt gtagctatat cacaagctca tgtttctacg atctcaattt CD 1151 gtatttactt gaatgatgct acaaatctcc atCaa FT EDITED CDNA CD 1 atgatgatga tgactagatt gagttccact gatatgaaga gaagaaatag CD 51 aatattggct aatatggtgc caattcgtaa tttaagttta ccttatgaat CD 101 atgaattagc tgaagaagaa tacaatccag tagaggcaac cagaggggtc CD 151 tgtatactcc tacgaataga cagatattta tctgaaattg gaaggcgcat CD 201 tccagaccgt gaggttctac gcgatttccg ccaacggtta ctctttcccc CD 251 aacgcgaggc tgggtacagc ttttccgaaa tatatgatga tatacgagcg CD 301 catggggtag gagcaagtcg attgggtcag cctctaagag atctgtacga CD 351 tgagatggaa aggaacggcg agatagtaaa taacggctca atcattatcc CD 401 ctggaggcgg cggaccagta acagaaagcc cattggatca atttggaatt CD 451 cacccaattc tggatctgaa tattggcaag tactatgtct cattcacaaa CD 501 tctatccttg tctatgctac tcactctcgg tttggtccta cttctggttt CD 551 ttgttgttac gaaaaaagga gggggaaagt cagtgccaaa tgcatggcaa CD 601 tccttggtgg agcttattta tgatttcgtg ccgaacctgg taaacgaaca CD 651 aataggtggt ctttccggaa atgtgaaaca caagtttttc ccttgcatct CD 701 cggtcacttt tactttttcg ttatttcgta atccccaggg tatgataccc CD 751 tttagcttca cagtgacaag tcattttctc attactttgg ctctttcatt CD 801 ttccattttt ataggcatta cgatcgttgg atttcaaaga catgggcttc CD 851 atttttttag cttcttatta ccagcgggag tcccactgcc attagcacct CD 901 tttttagtac tccttgagct aatctctcat tgttttcgtg cattaagctc CD 951 aggaatacgt ttatttgcta atatgatggc cggtcatagt tcagtaaaga CD 1001 ttttaagtgg gtttgcttgg actatgctat ttctgaataa tattttctat CD 1051 ttcttaggag atcttggtcc cttatttata gttctagcat taaccggtct CD 1101 ggaattaggt gtagctatat cacaagctca tgtttctacg atctcaattt CD 1151 gtatttactt gaatgatgct acaaatctcc atTaa SQ SEQUENCE 395 AA; MMMMTRLSST DMKRRNRILA NMVPIRNLSL PYEYELAEEE YNPVEATRGV CILLRIDRYL SEIGRRIPDR EVLRDFRQRL LFPQREAGYS FSEIYDDIRA HGVGASRLGQ PLRDLYDEME RNGEIVNNGS IIIPGGGGPV TESPLDQFGI HPILDLNIGK YYVSFTNLSL SMLLTLGLVL LLVFVVTKKG GGKSVPNAWQ SLVELIYDFV PNLVNEQIGG LSGNVKHKFF PCISVTFTFS LFRNPQGMIP FSFTVTSHFL ITLALSFSIF IGITIVGFQR HGLHFFSFLL PAGVPLPLAP FLVLLELISH CFRALSSGIR LFANMMAGHS SVKILSGFAW TMLFLNNIFY FLGDLGPLFI VLALTGLELG VAISQAHVST ISICIYLNDA TNLH* // ID DQ984518_23 STANDARD; PRT; 101 AA. AC DQ984518; DT Tue Jul 21 07:05:36 2009 DE Sorghum bicolor mitochondrion, complete genome. OS mitochondrion Sorghum bicolor (sorghum) OC Sorghum bicolor RN [1] RL Unpublished FT Full length CDS FT GENE : nad4L FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABI60883.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 310260 - 310562 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttcgagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttcgagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDPIKYFTFS MIISILGIRG ILLNRRNILI MSMPIESMLL AVNLNFLVFS VSLDDMMGQS FASLVPTVAA AESAIGLAIF VITFRVRGTI AVEFINCIQG * // ID DQ984518_27 STANDARD; PRT; 380 AA. AC DQ984518; DT Tue Jul 21 07:05:36 2009 DE Sorghum bicolor mitochondrion, complete genome. OS mitochondrion Sorghum bicolor (sorghum) OC Sorghum bicolor RN [1] RL Unpublished FT Full length CDS FT GENE : atp6 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABI60866.2 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 372010 - 373149 FT DIRECTIONS : negative FT EDITING : 380 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 1140 NT; CD 1 atgatgatgt ctagattgag tttaactgat atgaagggaa gaaatagaat CD 51 attggctcat atgaaaataa aacccactcg taggttttta acgatgcccc CD 101 cggcgccgat accatacaat aatcatgaaa gttattgtgg ggtccaaatt CD 151 ttgttgaaaa ttagtcgtta tttgaacgaa accgggaggc ctctgccgtc CD 201 ttacaacgct caccgggatt tccgagcaga agtactcggg ccccgactcg CD 251 ataatggcga aagctttagc ggcatcctcc aggggattaa taatgcgaac CD 301 ggaattggga atacgccttt agggcaagat atacgtgatc tgtacgctga CD 351 gtgggaaagg accggcgagc tcttaatacc aagccccttg gatcaatttg CD 401 gaattcaccc aattcttgat ctgaatatag gcaactttta tttatcattc CD 451 acaaatctat ccttgtctat gctactcact ctcggtttgg tcctacttct CD 501 ggtttttgtt gttacgaaaa aaggaggggg aaagtcagtg ccaaatgcat CD 551 ggcaatcctt ggtggagctt atttatgatt tcgtgccgaa cctggtaaac CD 601 gaacaaatag gtggtctttc cggaaatgtg aaacaaaagt ttttcccttg CD 651 catctcggtc acttttactt tttcgttatt tcgtaatccc cagggtatga CD 701 taccctttag cttcacagtg acaagtcatt ttctcattac tttggctctt CD 751 tcattttcca tttttatagg cattacgatc gttggatttc aaagacatgg CD 801 gcttcatttt tttagcttct tattaccagc gggagtccca ctgccattag CD 851 cacctttttt agtactcctt gagctaatct ctcattgttt tcgtgcatta CD 901 agctcaggaa tacgtttatt tgctaatatg atggccggtc atagttcagt CD 951 aaagatttta agtgggtttg cttggactat gctatttctg aataatattt CD 1001 tttatttcat aggagatctt ggtcccttat ttatagttct agcattaacc CD 1051 ggtctggaat taggtgtagc tatatcacaa gctcatgttt ctacgatctc CD 1101 aatttgtatt tacttgaatg atgctacaaa tctccatCaa FT EDITED CDNA CD 1 atgatgatgt ctagattgag tttaactgat atgaagggaa gaaatagaat CD 51 attggctcat atgaaaataa aacccactcg taggttttta acgatgcccc CD 101 cggcgccgat accatacaat aatcatgaaa gttattgtgg ggtccaaatt CD 151 ttgttgaaaa ttagtcgtta tttgaacgaa accgggaggc ctctgccgtc CD 201 ttacaacgct caccgggatt tccgagcaga agtactcggg ccccgactcg CD 251 ataatggcga aagctttagc ggcatcctcc aggggattaa taatgcgaac CD 301 ggaattggga atacgccttt agggcaagat atacgtgatc tgtacgctga CD 351 gtgggaaagg accggcgagc tcttaatacc aagccccttg gatcaatttg CD 401 gaattcaccc aattcttgat ctgaatatag gcaactttta tttatcattc CD 451 acaaatctat ccttgtctat gctactcact ctcggtttgg tcctacttct CD 501 ggtttttgtt gttacgaaaa aaggaggggg aaagtcagtg ccaaatgcat CD 551 ggcaatcctt ggtggagctt atttatgatt tcgtgccgaa cctggtaaac CD 601 gaacaaatag gtggtctttc cggaaatgtg aaacaaaagt ttttcccttg CD 651 catctcggtc acttttactt tttcgttatt tcgtaatccc cagggtatga CD 701 taccctttag cttcacagtg acaagtcatt ttctcattac tttggctctt CD 751 tcattttcca tttttatagg cattacgatc gttggatttc aaagacatgg CD 801 gcttcatttt tttagcttct tattaccagc gggagtccca ctgccattag CD 851 cacctttttt agtactcctt gagctaatct ctcattgttt tcgtgcatta CD 901 agctcaggaa tacgtttatt tgctaatatg atggccggtc atagttcagt CD 951 aaagatttta agtgggtttg cttggactat gctatttctg aataatattt CD 1001 tttatttcat aggagatctt ggtcccttat ttatagttct agcattaacc CD 1051 ggtctggaat taggtgtagc tatatcacaa gctcatgttt ctacgatctc CD 1101 aatttgtatt tacttgaatg atgctacaaa tctccatTaa SQ SEQUENCE 380 AA; MMMSRLSLTD MKGRNRILAH MKIKPTRRFL TMPPAPIPYN NHESYCGVQI LLKISRYLNE TGRPLPSYNA HRDFRAEVLG PRLDNGESFS GILQGINNAN GIGNTPLGQD IRDLYAEWER TGELLIPSPL DQFGIHPILD LNIGNFYLSF TNLSLSMLLT LGLVLLLVFV VTKKGGGKSV PNAWQSLVEL IYDFVPNLVN EQIGGLSGNV KQKFFPCISV TFTFSLFRNP QGMIPFSFTV TSHFLITLAL SFSIFIGITI VGFQRHGLHF FSFLLPAGVP LPLAPFLVLL ELISHCFRAL SSGIRLFANM MAGHSSVKIL SGFAWTMLFL NNIFYFIGDL GPLFIVLALT GLELGVAISQ AHVSTISICI YLNDATNLH* // ID DQ984518_32 STANDARD; PRT; 438 AA. AC DQ984518; DT Tue Jul 21 07:05:36 2009 DE Sorghum bicolor mitochondrion, complete genome. OS mitochondrion Sorghum bicolor (sorghum) OC Sorghum bicolor RN [1] RL Unpublished FT Full length CDS FT GENE : ccmFC FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABI60871.1 FT PROTEIN_NAME : cytochrome c biogenesis FC FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 252/2 FT EDITING : 438 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1314 NT; CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaatttttt gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgcatcgg tggatgaaga atcacgaaca taagaatttc CD 1051 tggtttagca tgttcccaga aagaagatac tttttttcca ttcgagaaac CD 1101 gaggagcacg actgaagtgg ctatacatac aaatccattt acggatctat CD 1151 atgctccgat tggaactgga agttccagaa ctggcggctg gtataccacc CD 1201 ataatgaaat tgccttttat ttttagtatt cggataggat ttctgttggc CD 1251 ttcatcggga ggctcgcgta gtttgttacg tcaactccaa aaggataagt CD 1301 tgcattggaa tCga FT EDITED CDNA CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaatttttt gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgcatcgg tggatgaaga atcacgaaca taagaatttc CD 1051 tggtttagca tgttcccaga aagaagatac tttttttcca ttcgagaaac CD 1101 gaggagcacg actgaagtgg ctatacatac aaatccattt acggatctat CD 1151 atgctccgat tggaactgga agttccagaa ctggcggctg gtataccacc CD 1201 ataatgaaat tgccttttat ttttagtatt cggataggat ttctgttggc CD 1251 ttcatcggga ggctcgcgta gtttgttacg tcaactccaa aaggataagt CD 1301 tgcattggaa tTga SQ SEQUENCE 438 AA; MVQLQNFFFF ITSMVVPRGT AAPVLLKWFV SRDVPTGASS SNGTIIPIPI SLFPFLVYLH SRKFIRSMDR AKSGVLVKAS RPILLPDKIG RSSSARNALF RFVPVLHFLI IESMGDLSYL ESFCGLLCLQ FFRTLFSLPR DRSAKRERAL RSKGQTLRPK GNEQQNDKMR CPGHPHIERR VEGFGPVAFP APPSSSGACL GGVPPEIGLE ALALPTSRLL MAVGHDYYKK VKMNLSISHG GVCIFMLGVL LSNTNKIQFT QRLPLGPELH MGKERCCLRG LDHLHGPTSH SICGNFLIYK PSPTSERFMF EHDESLRADL LPINFPASYE NGKLEDFLHR WMKNHEHKNF WFSMFPERRY FFSIRETRST TEVAIHTNPF TDLYAPIGTG SSRTGGWYTT IMKLPFIFSI RIGFLLASSG GSRSLLRQLQ KDKLHWN* // ID EF421241_1 STANDARD; PRT; 493 AA. AC EF421241; DT Tue Jul 21 07:05:45 2009 DE Thuja plicata NDH-B2 (ndhB2) gene, complete cds; chloroplast. OS chloroplast Thuja plicata (giant arborvitae) OC Thuja plicata RN [1] RL Unpublished FT Full length CDS FT GENE : ndhB2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABR13957.1 FT PROTEIN_NAME : NDH-B2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 242/0 FT EDITING : 259 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1479 NT; CD 1 atgaaagaat atcatttgct tcttttctat ggaagttcca ttttcccaga CD 51 atgcatcctt attttcggcc tatttcttct tctagtaatc gatgtcattt CD 101 ttgataagaa aaagacaact tggttctatt tcatctcttt aacaagttta CD 151 gtgctaagca tagctttttt gttatttcaa tggagagaag aacccacgat CD 201 catttttttt ggcaatttac aaacaaacaa ttttaataaa gtatttcggt CD 251 ttctcatttt attatgttct actttatgta ttcctctatc cgtggaatac CD 301 attcaatgta cagaaatggc tgtaacagag tttttgttat tcatattaac CD 351 agctactcta ggaggaatgt ttttatgtgg tgctaatgat ttaacaacta CD 401 tcttcgtatc tttagaatgt ttaagtctat gttcttatct attatctggg CD 451 tataccaaaa gagatattcg gtctaatgag gctattatga aatatttact CD 501 tatgggtgga acaagttctt ccattcttgc ttatggtctt tcttggctat CD 551 atggtctctc tggaggtgag attgaaattc aagaaatagc caatggtctt CD 601 ataaatacac aaatgtataa ctctccagga atttggattg cacttctatc CD 651 tgtaacggta ggaattgcat tcaaactttc tttagttcct tttcatcaat CD 701 ggacccccga tgtatatgaa ggatccccca ctccagtcgt tgcttttatt CD 751 tctgttattt caaaagtagc tgcttCagct ttagtcacta gaatttttga CD 801 tattattttt tatttctcat tgaacgaatg gcatcttctt ttggaagtat CD 851 cagctattct tagcatgata ttaggaaatt taattgctat tactcaaaca CD 901 agcataaaac gtatgcttgc atattcatcg ataggtcaaa ttggatatat CD 951 ccttattgga ataattggta aagactcaat taacggatat gcaagtgtga CD 1001 taacttatat gctgctctat atttttatga atttaggaac ttttgcttgt CD 1051 attgtattat tcagtctacg tacaggaaca gataacattc gggattatgc CD 1101 aggattatat atgaaagacc ctttttcagc tttgtcttta tctttatgtc CD 1151 tgctatctct aggagggatt cctccattag caggtttttt tggaaaactt CD 1201 tatctattct ggtgtggatg gcaagcaggc tcttatttat tggtttcgat CD 1251 aggactcttt atgagtgcta tttccatata ttattatctg aaaataatta CD 1301 agttattaat gactgaaaga aacaaagaaa tcactcccta cgtgcaaaat CD 1351 tataggttat cttcttcaac ctcaaaaaat tatatcgaat ttagtatgat CD 1401 tatatgtgta atagcatcta ctttattggg aataataatg aatccaattg CD 1451 ttgcgattgc tcaggatacc ctcttttag FT EDITED CDNA CD 1 atgaaagaat atcatttgct tcttttctat ggaagttcca ttttcccaga CD 51 atgcatcctt attttcggcc tatttcttct tctagtaatc gatgtcattt CD 101 ttgataagaa aaagacaact tggttctatt tcatctcttt aacaagttta CD 151 gtgctaagca tagctttttt gttatttcaa tggagagaag aacccacgat CD 201 catttttttt ggcaatttac aaacaaacaa ttttaataaa gtatttcggt CD 251 ttctcatttt attatgttct actttatgta ttcctctatc cgtggaatac CD 301 attcaatgta cagaaatggc tgtaacagag tttttgttat tcatattaac CD 351 agctactcta ggaggaatgt ttttatgtgg tgctaatgat ttaacaacta CD 401 tcttcgtatc tttagaatgt ttaagtctat gttcttatct attatctggg CD 451 tataccaaaa gagatattcg gtctaatgag gctattatga aatatttact CD 501 tatgggtgga acaagttctt ccattcttgc ttatggtctt tcttggctat CD 551 atggtctctc tggaggtgag attgaaattc aagaaatagc caatggtctt CD 601 ataaatacac aaatgtataa ctctccagga atttggattg cacttctatc CD 651 tgtaacggta ggaattgcat tcaaactttc tttagttcct tttcatcaat CD 701 ggacccccga tgtatatgaa ggatccccca ctccagtcgt tgcttttatt CD 751 tctgttattt caaaagtagc tgcttTagct ttagtcacta gaatttttga CD 801 tattattttt tatttctcat tgaacgaatg gcatcttctt ttggaagtat CD 851 cagctattct tagcatgata ttaggaaatt taattgctat tactcaaaca CD 901 agcataaaac gtatgcttgc atattcatcg ataggtcaaa ttggatatat CD 951 ccttattgga ataattggta aagactcaat taacggatat gcaagtgtga CD 1001 taacttatat gctgctctat atttttatga atttaggaac ttttgcttgt CD 1051 attgtattat tcagtctacg tacaggaaca gataacattc gggattatgc CD 1101 aggattatat atgaaagacc ctttttcagc tttgtcttta tctttatgtc CD 1151 tgctatctct aggagggatt cctccattag caggtttttt tggaaaactt CD 1201 tatctattct ggtgtggatg gcaagcaggc tcttatttat tggtttcgat CD 1251 aggactcttt atgagtgcta tttccatata ttattatctg aaaataatta CD 1301 agttattaat gactgaaaga aacaaagaaa tcactcccta cgtgcaaaat CD 1351 tataggttat cttcttcaac ctcaaaaaat tatatcgaat ttagtatgat CD 1401 tatatgtgta atagcatcta ctttattggg aataataatg aatccaattg CD 1451 ttgcgattgc tcaggatacc ctcttttag SQ SEQUENCE 493 AA; MKEYHLLLFY GSSIFPECIL IFGLFLLLVI DVIFDKKKTT WFYFISLTSL VLSIAFLLFQ WREEPTIIFF GNLQTNNFNK VFRFLILLCS TLCIPLSVEY IQCTEMAVTE FLLFILTATL GGMFLCGAND LTTIFVSLEC LSLCSYLLSG YTKRDIRSNE AIMKYLLMGG TSSSILAYGL SWLYGLSGGE IEIQEIANGL INTQMYNSPG IWIALLSVTV GIAFKLSLVP FHQWTPDVYE GSPTPVVAFI SVISKVAALA LVTRIFDIIF YFSLNEWHLL LEVSAILSMI LGNLIAITQT SIKRMLAYSS IGQIGYILIG IIGKDSINGY ASVITYMLLY IFMNLGTFAC IVLFSLRTGT DNIRDYAGLY MKDPFSALSL SLCLLSLGGI PPLAGFFGKL YLFWCGWQAG SYLLVSIGLF MSAISIYYYL KIIKLLMTER NKEITPYVQN YRLSSSTSKN YIEFSMIICV IASTLLGIIM NPIVAIAQDT LF* // ID EU161945_1 STANDARD; PRT; 207 AA. AC EU161945; DT Tue Jul 21 07:05:56 2009 DE Glycine max S1 ribosomal protein (rps1) gene, complete cds; and OS mitochondrion Glycine max (soybean) OC Glycine max RN [1] RL Gene 405 (1-2), 108-116 (2007) RL PUBMED 17961935 FT Full length CDS FT GENE : rps1 FT NOTE : small ribosomal subunit protein 1 FT LOCUS_TAG : FT PROTEIN_ID : ABW22414.1 FT PROTEIN_NAME : S1 ribosomal protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 83 - 703 FT DIRECTIONS : positive FT EDITING : 54 P(cCt) -> L(cTt) FT EDITING : 71 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 621 NT; CD 1 atgatgagca tctatttgag tcgatcattt ccaagatcta attccagttt CD 51 attcttatgt agtggaaagg ccttacaatc tgaagtttta cgcttagggg CD 101 aagaaatgtt cttggtggat gcaggacctg ggacccccag aatttgtatg CD 151 caagatgagc Ctacaggagt gccaatcaac cgagccacca ggtttgagaa CD 201 taaggtggga tCcctggatc tagtggccgg tgaatcactg atcaaaaaga CD 251 agattttgga gagattcttc atcgatctag tggccggcga atcactgatc CD 301 aaagagcgag cagccgccag gtttaatgat ttggtgggat ccacagatgt CD 351 agtggctggt gaaccgcttc ttcttcttcc acgaagattc agacaaaacc CD 401 tagcttggat ggaactgaac aagatttggc gaacgaatac aaaggtaaaa CD 451 ggctttatta ttgataaagt aaaaaaagga ggttattcag tagccatcgc CD 501 gggtttcatt acttttcttc cattccgttc tcacaacaaa agaagaagga CD 551 aaaagatatc gaatgatcga ttcaccattg agagcattaa ccccaaaagg CD 601 acgaatattg tggtgttcta a FT EDITED CDNA CD 1 atgatgagca tctatttgag tcgatcattt ccaagatcta attccagttt CD 51 attcttatgt agtggaaagg ccttacaatc tgaagtttta cgcttagggg CD 101 aagaaatgtt cttggtggat gcaggacctg ggacccccag aatttgtatg CD 151 caagatgagc Ttacaggagt gccaatcaac cgagccacca ggtttgagaa CD 201 taaggtggga tTcctggatc tagtggccgg tgaatcactg atcaaaaaga CD 251 agattttgga gagattcttc atcgatctag tggccggcga atcactgatc CD 301 aaagagcgag cagccgccag gtttaatgat ttggtgggat ccacagatgt CD 351 agtggctggt gaaccgcttc ttcttcttcc acgaagattc agacaaaacc CD 401 tagcttggat ggaactgaac aagatttggc gaacgaatac aaaggtaaaa CD 451 ggctttatta ttgataaagt aaaaaaagga ggttattcag tagccatcgc CD 501 gggtttcatt acttttcttc cattccgttc tcacaacaaa agaagaagga CD 551 aaaagatatc gaatgatcga ttcaccattg agagcattaa ccccaaaagg CD 601 acgaatattg tggtgttcta a SQ SEQUENCE 207 AA; MMSIYLSRSF PRSNSSLFLC SGKALQSEVL RLGEEMFLVD AGPGTPRICM QDELTGVPIN RATRFENKVG FLDLVAGESL IKKKILERFF IDLVAGESLI KERAAARFND LVGSTDVVAG EPLLLLPRRF RQNLAWMELN KIWRTNTKVK GFIIDKVKKG GYSVAIAGFI TFLPFRSHNK RRRKKISNDR FTIESINPKR TNIVVF* // ID EU161946_1 STANDARD; PRT; 207 AA. AC EU161946; DT Tue Jul 21 07:05:56 2009 DE Phaseolus vulgaris S1 ribosomal protein (rps1) gene, complete cds; OS mitochondrion Phaseolus vulgaris OC Phaseolus vulgaris RN [1] RL Gene 405 (1-2), 108-116 (2007) RL PUBMED 17961935 FT Full length CDS FT GENE : rps1 FT NOTE : small ribosomal subunit protein 1 FT LOCUS_TAG : FT PROTEIN_ID : ABW22416.1 FT PROTEIN_NAME : S1 ribosomal protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 124 - 744 FT DIRECTIONS : positive FT EDITING : 54 P(cCt) -> L(cTt) FT EDITING : 71 S(tCc) -> F(tTc) FT EDITING : 114 S(tcC) -> S(tcT) FT CODON_START : 1 CL CDNALEN 621 NT; CD 1 atgatgagca tctatttgag tcgatcattt ccaagatcta attccagttt CD 51 attcttatgt agtggaaagg ccttacaatc tgaagtttta cgcttagggg CD 101 aagaaatgtt cttggtggat gcaggacctg ggacccccag aatttgtatg CD 151 caagatgagc Ctacaggagt gccaatcaac cgagccacca ggtttgagaa CD 201 taaggtggga tCcctggatc tagtggccgg tgaatcactg atcaaaaaga CD 251 agattttgga gagattattc atcgatctag tggccggcga atcactgatc CD 301 aaagagcgag cagccgccag gtttaatgat ttggtgggat cCacagatgt CD 351 agtggctggt gaaccgcttc ttcttccacg aagattcaga caaaacctag CD 401 cttggatgaa actgaacaag atttggcgaa cgaatacaaa ggtaaaaggc CD 451 tttattcttg ataaagtaaa aggaggttat tcagtagcca tcgcgggttt CD 501 cattactttt cttccattcc gttctcacaa caaaagaaga aggaaaaaga CD 551 tatcgaatga tcgattcacc attgagagca ttaaccccaa aagcaaaagg CD 601 acgaatattg tggtgttcta a FT EDITED CDNA CD 1 atgatgagca tctatttgag tcgatcattt ccaagatcta attccagttt CD 51 attcttatgt agtggaaagg ccttacaatc tgaagtttta cgcttagggg CD 101 aagaaatgtt cttggtggat gcaggacctg ggacccccag aatttgtatg CD 151 caagatgagc Ttacaggagt gccaatcaac cgagccacca ggtttgagaa CD 201 taaggtggga tTcctggatc tagtggccgg tgaatcactg atcaaaaaga CD 251 agattttgga gagattattc atcgatctag tggccggcga atcactgatc CD 301 aaagagcgag cagccgccag gtttaatgat ttggtgggat cTacagatgt CD 351 agtggctggt gaaccgcttc ttcttccacg aagattcaga caaaacctag CD 401 cttggatgaa actgaacaag atttggcgaa cgaatacaaa ggtaaaaggc CD 451 tttattcttg ataaagtaaa aggaggttat tcagtagcca tcgcgggttt CD 501 cattactttt cttccattcc gttctcacaa caaaagaaga aggaaaaaga CD 551 tatcgaatga tcgattcacc attgagagca ttaaccccaa aagcaaaagg CD 601 acgaatattg tggtgttcta a SQ SEQUENCE 207 AA; MMSIYLSRSF PRSNSSLFLC SGKALQSEVL RLGEEMFLVD AGPGTPRICM QDELTGVPIN RATRFENKVG FLDLVAGESL IKKKILERLF IDLVAGESLI KERAAARFND LVGSTDVVAG EPLLLPRRFR QNLAWMKLNK IWRTNTKVKG FILDKVKGGY SVAIAGFITF LPFRSHNKRR RKKISNDRFT IESINPKSKR TNIVVF* // ID EU161947_1 STANDARD; PRT; 206 AA. AC EU161947; DT Tue Jul 21 07:05:56 2009 DE Pisum sativum S1 ribosomal protein (rps1) gene, complete cds; and OS mitochondrion Pisum sativum (pea) OC Pisum sativum RN [1] RL Gene 405 (1-2), 108-116 (2007) RL PUBMED 17961935 FT Full length CDS FT GENE : rps1 FT NOTE : small ribosomal subunit protein 1 FT LOCUS_TAG : FT PROTEIN_ID : ABW22418.1 FT PROTEIN_NAME : S1 ribosomal protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 269 - 886 FT DIRECTIONS : positive FT EDITING : 54 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 618 NT; CD 1 atgatgagca tctatttgag tcgatcattt ccaagatgta attcaagttt CD 51 attcttatgt agtggaaagg ccttacaatc tgaagtttta cgcttagggg CD 101 aagaaatgtt cttggtggat gcaggacctg ggacccccag aaattgtatg CD 151 caagatgagc Ctacaggagt gccaatcaac cgagccacca ggtttgagaa CD 201 taaggtggga ttcctggatc tagtggccgg tgaatcactg atcaaaaaga CD 251 agattttgga gagattattc atcgatctag tggccggcga atcactgatc CD 301 aaagagcgag cagccgccag gtttaatgat ttggtgggat ccacagatgt CD 351 agtggccggt gaaccgcttc ttcttcttcc acgaagattc agacaaaacc CD 401 gagcttggat gaaactgaac aagatttggc gaacgaatac aaaggtaaaa CD 451 ggctttatta ttgataaagt caaaggaggt tattcagtag ccatcgcggg CD 501 tttcattact tttcttccat tccgttctca caacaaaagg aaaaaaagga CD 551 ggatatcgaa tgatcgattc accattgaga gcattaaccc caaaaggacg CD 601 aatattgtgg tgttctaa FT EDITED CDNA CD 1 atgatgagca tctatttgag tcgatcattt ccaagatgta attcaagttt CD 51 attcttatgt agtggaaagg ccttacaatc tgaagtttta cgcttagggg CD 101 aagaaatgtt cttggtggat gcaggacctg ggacccccag aaattgtatg CD 151 caagatgagc Ttacaggagt gccaatcaac cgagccacca ggtttgagaa CD 201 taaggtggga ttcctggatc tagtggccgg tgaatcactg atcaaaaaga CD 251 agattttgga gagattattc atcgatctag tggccggcga atcactgatc CD 301 aaagagcgag cagccgccag gtttaatgat ttggtgggat ccacagatgt CD 351 agtggccggt gaaccgcttc ttcttcttcc acgaagattc agacaaaacc CD 401 gagcttggat gaaactgaac aagatttggc gaacgaatac aaaggtaaaa CD 451 ggctttatta ttgataaagt caaaggaggt tattcagtag ccatcgcggg CD 501 tttcattact tttcttccat tccgttctca caacaaaagg aaaaaaagga CD 551 ggatatcgaa tgatcgattc accattgaga gcattaaccc caaaaggacg CD 601 aatattgtgg tgttctaa SQ SEQUENCE 206 AA; MMSIYLSRSF PRCNSSLFLC SGKALQSEVL RLGEEMFLVD AGPGTPRNCM QDELTGVPIN RATRFENKVG FLDLVAGESL IKKKILERLF IDLVAGESLI KERAAARFND LVGSTDVVAG EPLLLLPRRF RQNRAWMKLN KIWRTNTKVK GFIIDKVKGG YSVAIAGFIT FLPFRSHNKR KKRRISNDRF TIESINPKRT NIVVF* // ID EU161948_1 STANDARD; PRT; 206 AA. AC EU161948; DT Tue Jul 21 07:05:56 2009 DE Ononis spinosa S1 ribosomal protein (rps1) gene, complete cds; and OS mitochondrion Ononis spinosa OC Ononis spinosa RN [1] RL Gene 405 (1-2), 108-116 (2007) RL PUBMED 17961935 FT Full length CDS FT GENE : rps1 FT NOTE : small ribosomal subunit protein 1 FT LOCUS_TAG : FT PROTEIN_ID : ABW22420.1 FT PROTEIN_NAME : S1 ribosomal protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 111 - 728 FT DIRECTIONS : positive FT EDITING : 54 P(cCt) -> L(cTt) FT EDITING : 114 S(tcC) -> S(tcT) FT CODON_START : 1 CL CDNALEN 618 NT; CD 1 atgatgagca tctatttgag tcgatcattt ccaagatgta attcaagttt CD 51 attcttatgt agtggaaagg ccttacaatc tgaagtttta cgcttagggg CD 101 aagaaatgtt cttggtggat gcaggacctg ggacccccag aaattgtatg CD 151 caagatgagc Ctacaggagt gccaatcaac cgagccacca ggtttgagaa CD 201 taaggtggga ttcctggatc tagtggccgg tgaatcactg atcaaaaaga CD 251 agattttgga gagattattc atcgatctag tggccggcga atcactgatc CD 301 aaagagcgag cagccgccag gtttaatgat ttggtgggat cCacagatgt CD 351 agtggctggt gaaccgcttc ttcttcttcc acgaagattc agacaaaacc CD 401 gagcttggat gaaactgaac aagatttggc gaacgaatac aaaggtaaaa CD 451 ggctttatta ttgataaagt caaaggaggt tattcagtag ccatcgcggg CD 501 tttcattact tttcttccat tccgttctca caacaaaagg aaaaaaagga CD 551 ggatatcaaa tgatcaattc accattgaga gcattaaccc caaaaggact CD 601 aatattgtgg tgttctaa FT EDITED CDNA CD 1 atgatgagca tctatttgag tcgatcattt ccaagatgta attcaagttt CD 51 attcttatgt agtggaaagg ccttacaatc tgaagtttta cgcttagggg CD 101 aagaaatgtt cttggtggat gcaggacctg ggacccccag aaattgtatg CD 151 caagatgagc Ttacaggagt gccaatcaac cgagccacca ggtttgagaa CD 201 taaggtggga ttcctggatc tagtggccgg tgaatcactg atcaaaaaga CD 251 agattttgga gagattattc atcgatctag tggccggcga atcactgatc CD 301 aaagagcgag cagccgccag gtttaatgat ttggtgggat cTacagatgt CD 351 agtggctggt gaaccgcttc ttcttcttcc acgaagattc agacaaaacc CD 401 gagcttggat gaaactgaac aagatttggc gaacgaatac aaaggtaaaa CD 451 ggctttatta ttgataaagt caaaggaggt tattcagtag ccatcgcggg CD 501 tttcattact tttcttccat tccgttctca caacaaaagg aaaaaaagga CD 551 ggatatcaaa tgatcaattc accattgaga gcattaaccc caaaaggact CD 601 aatattgtgg tgttctaa SQ SEQUENCE 206 AA; MMSIYLSRSF PRCNSSLFLC SGKALQSEVL RLGEEMFLVD AGPGTPRNCM QDELTGVPIN RATRFENKVG FLDLVAGESL IKKKILERLF IDLVAGESLI KERAAARFND LVGSTDVVAG EPLLLLPRRF RQNRAWMKLN KIWRTNTKVK GFIIDKVKGG YSVAIAGFIT FLPFRSHNKR KKRRISNDQF TIESINPKRT NIVVF* // ID EU301615_1 STANDARD; PRT; 52 AA. AC EU301615; DT Tue Jul 21 07:05:58 2009 DE Sciadopitys verticillata cytochrome b-559 alpha subunit (psbE) OS chloroplast Sciadopitys verticillata OC Sciadopitys verticillata RN [1] RL J. Mol. Evol. 67 (3), 233-245 (2008) RL PUBMED 18696032 FT N-terminal not determined FT GENE : psbE FT NOTE : photosystem II protein V FT LOCUS_TAG : FT PROTEIN_ID : ABY75879.1 FT PROTEIN_NAME : cytochrome b-559 alpha subunit FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 158 FT DIRECTIONS : positive FT EDITING : 40 P(Cca) -> S(Tca) FT CODON_START : 3 CL CDNALEN 158 NT; CD 1 ttgcaggttg gttatttgtc agcacggggt tggcttatga tgtattcggg CD 51 agcccccgtc cgaatgagta tttcacagaa agccgacaag aggttccatt CD 101 aataactggt cgtttcgatC cattagaaca actcgatgaa tttactagat CD 151 cgttttag FT EDITED CDNA CD 1 ttgcaggttg gttatttgtc agcacggggt tggcttatga tgtattcggg CD 51 agcccccgtc cgaatgagta tttcacagaa agccgacaag aggttccatt CD 101 aataactggt cgtttcgatT cattagaaca actcgatgaa tttactagat CD 151 cgttttag SQ SEQUENCE 52 AA; AGWLFVSTGL AYDVFGSPRP NEYFTESRQE VPLITGRFDS LEQLDEFTRS F* // ID EU301617_1 STANDARD; PRT; 46 AA. AC EU301617; DT Tue Jul 21 07:05:58 2009 DE Zamia muricata cytochrome b-559 alpha subunit (psbE) mRNA, partial OS chloroplast Zamia muricata (Zamia latifolia) OC Zamia muricata RN [1] RL J. Mol. Evol. 67 (3), 233-245 (2008) RL PUBMED 18696032 FT N-terminal not determined FT C-terminal not determined FT GENE : psbE FT NOTE : photosystem II protein V FT LOCUS_TAG : FT PROTEIN_ID : ABY75881.1 FT PROTEIN_NAME : cytochrome b-559 alpha subunit FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 139 FT DIRECTIONS : positive FT EDITING : 38 L(tCy) -> G(tTy) FT EDITING : 40 P(Ccg) -> S(Tcg) FT CODON_START : 3 CL CDNALEN 139 NT; CD 1 ttgcgggttg gttatttgtc agcacgggtt tagcttacga tgtatttggg CD 51 agcccccggc caaacgagta tttcacagag agtcgacaag aggttccatt CD 101 aatcactggc cgttCygatC cgttggagca actcgatga FT EDITED CDNA CD 1 ttgcgggttg gttatttgtc agcacgggtt tagcttacga tgtatttggg CD 51 agcccccggc caaacgagta tttcacagag agtcgacaag aggttccatt CD 101 aatcactggc cgttTygatT cgttggagca actcgatga SQ SEQUENCE 46 AA; AGWLFVSTGL AYDVFGSPRP NEYFTESRQE VPLITGRXDS LEQLDX // ID EU301619_1 STANDARD; PRT; 52 AA. AC EU301619; DT Tue Jul 21 07:05:58 2009 DE Cycas revoluta cytochrome b-559 alpha subunit (psbE) mRNA, partial OS chloroplast Cycas revoluta OC Cycas revoluta RN [1] RL J. Mol. Evol. 67 (3), 233-245 (2008) RL PUBMED 18696032 FT N-terminal not determined FT GENE : psbE FT NOTE : photosystem II protein V FT LOCUS_TAG : FT PROTEIN_ID : ABY75883.1 FT PROTEIN_NAME : cytochrome b-559 alpha subunit FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 158 FT DIRECTIONS : positive FT EDITING : 38 S(tCc) -> F(tTc) FT EDITING : 40 P(Ccg) -> S(Tcg) FT CODON_START : 3 CL CDNALEN 158 NT; CD 1 ttgcaggttg gttatttgtc agcacgggtt tagcttacga tgtatttgga CD 51 agcccccggc cgaacgagta tttcacagaa aaccgacaag aggttccatt CD 101 aatcactggc cgttCcgatC cgttggaaca actcaatgaa tttactagat CD 151 ctttttag FT EDITED CDNA CD 1 ttgcaggttg gttatttgtc agcacgggtt tagcttacga tgtatttgga CD 51 agcccccggc cgaacgagta tttcacagaa aaccgacaag aggttccatt CD 101 aatcactggc cgttTcgatT cgttggaaca actcaatgaa tttactagat CD 151 ctttttag SQ SEQUENCE 52 AA; AGWLFVSTGL AYDVFGSPRP NEYFTENRQE VPLITGRFDS LEQLNEFTRS F* // ID EU301621_1 STANDARD; PRT; 47 AA. AC EU301621; DT Tue Jul 21 07:05:58 2009 DE Dioon edule cytochrome b-559 alpha subunit (psbE) mRNA, partial OS chloroplast Dioon edule OC Dioon edule RN [1] RL J. Mol. Evol. 67 (3), 233-245 (2008) RL PUBMED 18696032 FT N-terminal not determined FT C-terminal not determined FT GENE : psbE FT NOTE : photosystem II protein V FT LOCUS_TAG : FT PROTEIN_ID : ABY75885.1 FT PROTEIN_NAME : cytochrome b-559 alpha subunit FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 140 FT DIRECTIONS : positive FT EDITING : 39 L(Ctc) -> F(Ttc) FT EDITING : 40 D(gaC) -> D(gaT) FT CODON_START : 1 CL CDNALEN 140 NT; CD 1 atcgcgggtt ggttatttgt cagcacgggt ttagcttacg atgtatttgg CD 51 gagcccccgg ccaaacgagt atttcacaga gagtcgacaa gaggttccat CD 101 taatcactgg ccgtCtcgaC tcgttggagc aactcgatga FT EDITED CDNA CD 1 atcgcgggtt ggttatttgt cagcacgggt ttagcttacg atgtatttgg CD 51 gagcccccgg ccaaacgagt atttcacaga gagtcgacaa gaggttccat CD 101 taatcactgg ccgtTtcgaT tcgttggagc aactcgatga SQ SEQUENCE 47 AA; IAGWLFVSTG LAYDVFGSPR PNEYFTESRQ EVPLITGRFD SLEQLDX // ID EU660574_3 STANDARD; PRT; 86 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : sdh4 FT NOTE : FT LOCUS_TAG : MeaeMp04 FT PROTEIN_ID : ACC86772.1 FT PROTEIN_NAME : succinate dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 10023 - 10280 FT DIRECTIONS : positive FT EDITING : 14 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 258 NT; CD 1 atgaaggctc ataaagaaac cttagggcat tggcctcttT aaataattag CD 51 tgctgctttt tttgtaatga tttttatagc aaatgcttcc actttgattc CD 101 tgctaaatat cttgctactc tggcatattc atgtaggaat cgaagaaatt CD 151 ctgacagatc atgttcacca tgaagtaaca cgaaatttga tctttatttt CD 201 tctcagaata ttttttttaa taattattaa atatgcgttt gtgttttttg CD 251 tcttttag FT EDITED CDNA CD 1 atgaaggctc ataaagaaac cttagggcat tggcctcttC aaataattag CD 51 tgctgctttt tttgtaatga tttttatagc aaatgcttcc actttgattc CD 101 tgctaaatat cttgctactc tggcatattc atgtaggaat cgaagaaatt CD 151 ctgacagatc atgttcacca tgaagtaaca cgaaatttga tctttatttt CD 201 tctcagaata ttttttttaa taattattaa atatgcgttt gtgttttttg CD 251 tcttttag SQ SEQUENCE 86 AA; MKAHKETLGH WPLQIISAAF FVMIFIANAS TLILLNILLL WHIHVGIEEI LTDHVHHEVT RNLIFIFLRI FFLIIIKYAF VFFVF* // ID EU660574_4 STANDARD; PRT; 101 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : nad4L FT NOTE : FT LOCUS_TAG : MeaeMp05 FT PROTEIN_ID : ACC86773.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 11243 - 11545 FT DIRECTIONS : positive FT EDITING : 85 *(Tga) -> R(Cga) FT EDITING : 101 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atggatctag tcaactattt aacattctcc atgattcctt cttttttggg CD 51 tatttgggga attcttccga ataaaagaaa tattcctatt atgccaacgc CD 101 tgattgagtc aatgttactt gcagtcaatt tgaattcctt ggtatttctg CD 151 gttcatttgg atgatatgat gggtcaatta tccgctctat ttgctttaac CD 201 gatggctgct gtggaatctg ctattgggcc ggccattctg gtcattactt CD 251 ttTgaattcg cggaactatt gctgtggaat tgattagttg catgaagggt CD 301 Caa FT EDITED CDNA CD 1 atggatctag tcaactattt aacattctcc atgattcctt cttttttggg CD 51 tatttgggga attcttccga ataaaagaaa tattcctatt atgccaacgc CD 101 tgattgagtc aatgttactt gcagtcaatt tgaattcctt ggtatttctg CD 151 gttcatttgg atgatatgat gggtcaatta tccgctctat ttgctttaac CD 201 gatggctgct gtggaatctg ctattgggcc ggccattctg gtcattactt CD 251 ttCgaattcg cggaactatt gctgtggaat tgattagttg catgaagggt CD 301 Taa SQ SEQUENCE 101 AA; MDLVNYLTFS MIPSFLGIWG ILPNKRNIPI MPTLIESMLL AVNLNSLVFL VHLDDMMGQL SALFALTMAA VESAIGPAIL VITFRIRGTI AVELISCMKG * // ID EU660574_5 STANDARD; PRT; 247 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : tatC FT NOTE : FT LOCUS_TAG : MeaeMp06 FT PROTEIN_ID : ACC86774.1 FT PROTEIN_NAME : Sec-Y independent protein translocase component FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 12691 - 13431 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 86 *(Taa) -> Q(Caa) FT EDITING : 171 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 741 NT; CD 1 aCgaattttg tattcaaaac tatttcggag gaagtgagaa ttcgtttctt CD 51 tcggatattg attcgcttta gtttgacacg gttcacgtgt cattggtttc CD 101 cagaagagtg tattttctta ttagctaaat cctctcccac ctcgccttat CD 151 ttagattcat ttcttattcg tacagaatca acggaagcct cgagcacata CD 201 tgttactacg tccctaatat cacgcttcta ctttttcctc cccctcccaa CD 251 gtcacTaaat ttggtgcttt ttcatcccca gttgctatga agaacgaaga CD 301 agggaataca aaaaattgtt ttacttaagt ggttttcgct tcttcttgtt CD 351 tctcttcgtc accttcgttt gggtagttcc taaagttcgg cactttctat CD 401 acgaatcgag tacaacatca actaattcgc tcataatcaa gttacaaccc CD 451 aagattcttg actatactat gccaactgtt cgtatttcgt ttatttcacc CD 501 aatacgctcc Taagtccccg tccttgtgat ctgtttgcta gaatcaaaag CD 551 atgtttccgt gaaaacctgt ataaagaatc gtcgtttctc tttagttctt CD 601 ccggttttca cagcagctct tattacacct ccagagatct ggtgtcaaat CD 651 tgtggcttgt ttacctatct attttattac agagttgaca attctttacg CD 701 cattaattat acaagttcat aagaagctac tatcgggata g FT EDITED CDNA CD 1 aTgaattttg tattcaaaac tatttcggag gaagtgagaa ttcgtttctt CD 51 tcggatattg attcgcttta gtttgacacg gttcacgtgt cattggtttc CD 101 cagaagagtg tattttctta ttagctaaat cctctcccac ctcgccttat CD 151 ttagattcat ttcttattcg tacagaatca acggaagcct cgagcacata CD 201 tgttactacg tccctaatat cacgcttcta ctttttcctc cccctcccaa CD 251 gtcacCaaat ttggtgcttt ttcatcccca gttgctatga agaacgaaga CD 301 agggaataca aaaaattgtt ttacttaagt ggttttcgct tcttcttgtt CD 351 tctcttcgtc accttcgttt gggtagttcc taaagttcgg cactttctat CD 401 acgaatcgag tacaacatca actaattcgc tcataatcaa gttacaaccc CD 451 aagattcttg actatactat gccaactgtt cgtatttcgt ttatttcacc CD 501 aatacgctcc Caagtccccg tccttgtgat ctgtttgcta gaatcaaaag CD 551 atgtttccgt gaaaacctgt ataaagaatc gtcgtttctc tttagttctt CD 601 ccggttttca cagcagctct tattacacct ccagagatct ggtgtcaaat CD 651 tgtggcttgt ttacctatct attttattac agagttgaca attctttacg CD 701 cattaattat acaagttcat aagaagctac tatcgggata g SQ SEQUENCE 247 AA; MNFVFKTISE EVRIRFFRIL IRFSLTRFTC HWFPEECIFL LAKSSPTSPY LDSFLIRTES TEASSTYVTT SLISRFYFFL PLPSHQIWCF FIPSCYEERR REYKKLFYLS GFRFFLFLFV TFVWVVPKVR HFLYESSTTS TNSLIIKLQP KILDYTMPTV RISFISPIRS QVPVLVICLL ESKDVSVKTC IKNRRFSLVL PVFTAALITP PEIWCQIVAC LPIYFITELT ILYALIIQVH KKLLSG* // ID EU660574_9 STANDARD; PRT; 75 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : atp9 FT NOTE : FT LOCUS_TAG : MeaeMp11 FT PROTEIN_ID : ACC86778.1 FT PROTEIN_NAME : ATP synthase F0 subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 32/2 FT EDITING : 44 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgctagaag gtgcaaaatt aattggagca ggagcagcta ccattgctcc CD 51 agcgggagct gccataggta ttggaaacgt atctagttct tcgactcatt CD 101 ctgttgcgcg aaatccatcc ccggctaagT aatcatctgg ttatgctacc CD 151 tcaggttttg cgtcaaccga agctattgct tcgcctgcct caacgacggc CD 201 gtcttcaaca tcatttgcct tttaa FT EDITED CDNA CD 1 atgctagaag gtgcaaaatt aattggagca ggagcagcta ccattgctcc CD 51 agcgggagct gccataggta ttggaaacgt atctagttct tcgactcatt CD 101 ctgttgcgcg aaatccatcc ccggctaagC aatcatctgg ttatgctacc CD 151 tcaggttttg cgtcaaccga agctattgct tcgcctgcct caacgacggc CD 201 gtcttcaaca tcatttgcct tttaa SQ SEQUENCE 75 AA; MLEGAKLIGA GAATIAPAGA AIGIGNVSSS STHSVARNPS PAKQSSGYAT SGFASTEAIA SPASTTASST SFAF* // ID EU660574_12 STANDARD; PRT; 123 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : rps13 FT NOTE : FT LOCUS_TAG : MeaeMp15 FT PROTEIN_ID : ACF03810.1 FT PROTEIN_NAME : ribosomal protein S13 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 45488 - 45856 FT DIRECTIONS : negative FT EDITING : 52 *(Tag) -> Q(Cag) FT CODON_START : 1 CL CDNALEN 369 NT; CD 1 atgtcatata ttttaggaac taattcaatt tccaataaac aaataagaat CD 51 tgccttaatt caaattttcg gaattggccc caaaaaggca attcagcttt CD 101 gttatcgctt aggtctcagt gataacatta gggtgaataa gttaacgtcg CD 151 tatTagattg acaaaattct gaaaataata agtcagaatt atttagttga CD 201 ttcggaattg aaagcagtga ttcaaagaga tatcaaacga ttaatcagta CD 251 ttggttgtta tcgtggattt cgtcacaacg caggattacc cttacgtggt CD 301 caacgaactc atactaatgc taagacttgt cgcagattcc aaaacgtttc CD 351 gatcaatcaa cgaagttga FT EDITED CDNA CD 1 atgtcatata ttttaggaac taattcaatt tccaataaac aaataagaat CD 51 tgccttaatt caaattttcg gaattggccc caaaaaggca attcagcttt CD 101 gttatcgctt aggtctcagt gataacatta gggtgaataa gttaacgtcg CD 151 tatCagattg acaaaattct gaaaataata agtcagaatt atttagttga CD 201 ttcggaattg aaagcagtga ttcaaagaga tatcaaacga ttaatcagta CD 251 ttggttgtta tcgtggattt cgtcacaacg caggattacc cttacgtggt CD 301 caacgaactc atactaatgc taagacttgt cgcagattcc aaaacgtttc CD 351 gatcaatcaa cgaagttga SQ SEQUENCE 123 AA; MSYILGTNSI SNKQIRIALI QIFGIGPKKA IQLCYRLGLS DNIRVNKLTS YQIDKILKII SQNYLVDSEL KAVIQRDIKR LISIGCYRGF RHNAGLPLRG QRTHTNAKTC RRFQNVSINQ RS* // ID EU660574_13 STANDARD; PRT; 115 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : rps14 FT NOTE : FT LOCUS_TAG : MeaeMp18 FT PROTEIN_ID : ACC86781.1 FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 47670 - 48014 FT DIRECTIONS : negative FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 7 *(Tga) -> R(Cga) FT EDITING : 50 *(Taa) -> Q(Caa) FT EDITING : 75 *(Tga) -> R(Cga) FT EDITING : 99 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 345 NT; CD 1 aCgtcgaata aattcataTg agatgataaa tgtagattgc tgcttatagc CD 51 taaaaatgaa gcaaaacgaa tgcattataa agctatttat gaagatagaa CD 101 ctcttcctaa tcaaatatgt tatgattatt ttcattgtct aagtcgcTaa CD 151 atagttccga agttgcgtaa attgctagga aacagttccg aaacacaaga CD 201 aacgcgagta agaagatgta ttTgaacgga tcgccctcgt tccgtatcta CD 251 agttatttcg ggtttatcgg atgatgatag tttatcgtaa taaaTgagcc CD 301 tctaaggctt tctcattaat aggcacaagc aaattgtgtc ggtag FT EDITED CDNA CD 1 aTgtcgaata aattcataCg agatgataaa tgtagattgc tgcttatagc CD 51 taaaaatgaa gcaaaacgaa tgcattataa agctatttat gaagatagaa CD 101 ctcttcctaa tcaaatatgt tatgattatt ttcattgtct aagtcgcCaa CD 151 atagttccga agttgcgtaa attgctagga aacagttccg aaacacaaga CD 201 aacgcgagta agaagatgta ttCgaacgga tcgccctcgt tccgtatcta CD 251 agttatttcg ggtttatcgg atgatgatag tttatcgtaa taaaCgagcc CD 301 tctaaggctt tctcattaat aggcacaagc aaattgtgtc ggtag SQ SEQUENCE 115 AA; MSNKFIRDDK CRLLLIAKNE AKRMHYKAIY EDRTLPNQIC YDYFHCLSRQ IVPKLRKLLG NSSETQETRV RRCIRTDRPR SVSKLFRVYR MMIVYRNKRA SKAFSLIGTS KLCR* // ID EU660574_18 STANDARD; PRT; 119 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : nad3 FT NOTE : FT LOCUS_TAG : MeaeMp24 FT PROTEIN_ID : ACC86786.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 18/1 FT INTRON 47/2 FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 59 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 aCggaatttg tacctatttg tgtctattta gtaatcagtt cgctacttcc CD 51 tctgatctta attggtgttt ctcttttatt tgctttccct tccagttcgg CD 101 cttatccaga gaaattgtca gctcacgaat gtggttccga tccttctgat CD 151 gatgccagaa gtcgttttga tataTgactc tatcttgttc ttacttcatc CD 201 tattatatcc gactcggaag tcacctcttc atttccttgg gcagttcctc CD 251 ctaacaagat tggtttgttt ggatcttggt ctatgatggt attctcattg CD 301 atttcgacga ttggatttgt atatgaatgg aaaaagggcg cttcagattg CD 351 ggagtaa FT EDITED CDNA CD 1 aTggaatttg tacctatttg tgtctattta gtaatcagtt cgctacttcc CD 51 tctgatctta attggtgttt ctcttttatt tgctttccct tccagttcgg CD 101 cttatccaga gaaattgtca gctcacgaat gtggttccga tccttctgat CD 151 gatgccagaa gtcgttttga tataCgactc tatcttgttc ttacttcatc CD 201 tattatatcc gactcggaag tcacctcttc atttccttgg gcagttcctc CD 251 ctaacaagat tggtttgttt ggatcttggt ctatgatggt attctcattg CD 301 atttcgacga ttggatttgt atatgaatgg aaaaagggcg cttcagattg CD 351 ggagtaa SQ SEQUENCE 119 AA; MEFVPICVYL VISSLLPLIL IGVSLLFAFP SSSAYPEKLS AHECGSDPSD DARSRFDIRL YLVLTSSIIS DSEVTSSFPW AVPPNKIGLF GSWSMMVFSL ISTIGFVYEW KKGASDWE* // ID EU660574_19 STANDARD; PRT; 514 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : atp1 FT NOTE : FT LOCUS_TAG : MeaeMp25 FT PROTEIN_ID : ACC86787.1 FT PROTEIN_NAME : ATP synthase F1 subunit alpha FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 269/1 FT INTRON 340/2 FT INTRON 351/0 FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 49 *(Tag) -> Q(Cag) FT EDITING : 127 *(Tga) -> R(Cga) FT EDITING : 210 *(Tag) -> Q(Cag) FT CODON_START : 1 CL CDNALEN 1542 NT; CD 1 aCgaacaaat ttgctggaac ggagccatct acgttattag aacaaagaat CD 51 taccaactat tacaccaaat tgcaagtgga tgagatcggt cgagtggtat CD 101 cagttggaga tggaattgca cgtgtttatg gatcgaacaa gattTaggca CD 151 ggggaaatgg tcgaatttgc cagcggtgtg aaaggaatgg ctttgaatct CD 201 agagaaggaa aatgtaggaa ttgttgtatt tggtagtgat accgctatta CD 251 aagaaggaga tattgtaagg cgcactggat ctattgtgga tgttcctgta CD 301 ggaaaggcca tattaggtcg tgtagttgat gcgttaggag tacctattga CD 351 tggaaaaggt gccttaggcg ctgtagaaTg aagacgtgta gaagttaaag CD 401 cccctggaat tattgcacgc aaatccgtgc acgaaccaat gcaaacagga CD 451 ttaaaagcgg tggacagcct ggttcctata ggtcgtggtc aacgagaacc CD 501 tataatagga gacagacaaa ctggaaagac tgctgtagct attgatacca CD 551 tatcgaacca gaaagaaatc aacgcacagg gcacctctaa tagtgagaaa CD 601 ttgtattgtg tgtatgtagc aattggaTag aaacgttcaa ccgtagcaca CD 651 attggttaag accctttcag aagcgggtgc tttggaatat tgcattattc CD 701 tagcagccag tgcttcagat catgctcctt tacaatttct tgcaccctat CD 751 tcaggttgcg cgatgggaga atattttcga gataatggga tgcacgcatt CD 801 aatcatctat gatgatctga gtaagcaagc agtggcatat cggcagatgt CD 851 cattattatt acgtcgacca cctggccgtg aggcgttccc aggggatgtc CD 901 ttctatccac attctcgttt gtcagaaaga gccgctaaga tgtcagacca CD 951 gactggcgca ggtagcttga ctgcattacc tgtgattgaa acacaagctg CD 1001 gagacgtatc tgcttatatt cccaccaatg tgattcccat tacagatgga CD 1051 caaatctttt tggaaacaga actcttttat cgtggaattc gacctgctat CD 1101 taacgcggga ttatctgtga gtcgcgtcgg ttctgcggct cagttgaaag CD 1151 ctatgaaaca agtatgtggt agcttaaaac tagaattggc acagtatcgt CD 1201 gaggtagccg cttctgctca attcggttca gaccctgatg ctgctactaa CD 1251 gtatttatca aatcgtggag ctaggctaac ggaagttcct aaacaaccac CD 1301 agtatagccc aattccaatt gagaaacaaa ttgtggttat tcatgcagct CD 1351 gtcaaaggtt atttagatga aattcctatt tcaattatta atgaatatga CD 1401 acatgagcca ttgaagtcta ttgatccaag tatactttct gctattgtta CD 1451 aacaaaaaag catctctgag gaaattaaca gtcaacttgc gacctttcgc CD 1501 aaaaaattga cacagagctt cttagcaact cattcggttt ga FT EDITED CDNA CD 1 aTgaacaaat ttgctggaac ggagccatct acgttattag aacaaagaat CD 51 taccaactat tacaccaaat tgcaagtgga tgagatcggt cgagtggtat CD 101 cagttggaga tggaattgca cgtgtttatg gatcgaacaa gattCaggca CD 151 ggggaaatgg tcgaatttgc cagcggtgtg aaaggaatgg ctttgaatct CD 201 agagaaggaa aatgtaggaa ttgttgtatt tggtagtgat accgctatta CD 251 aagaaggaga tattgtaagg cgcactggat ctattgtgga tgttcctgta CD 301 ggaaaggcca tattaggtcg tgtagttgat gcgttaggag tacctattga CD 351 tggaaaaggt gccttaggcg ctgtagaaCg aagacgtgta gaagttaaag CD 401 cccctggaat tattgcacgc aaatccgtgc acgaaccaat gcaaacagga CD 451 ttaaaagcgg tggacagcct ggttcctata ggtcgtggtc aacgagaacc CD 501 tataatagga gacagacaaa ctggaaagac tgctgtagct attgatacca CD 551 tatcgaacca gaaagaaatc aacgcacagg gcacctctaa tagtgagaaa CD 601 ttgtattgtg tgtatgtagc aattggaCag aaacgttcaa ccgtagcaca CD 651 attggttaag accctttcag aagcgggtgc tttggaatat tgcattattc CD 701 tagcagccag tgcttcagat catgctcctt tacaatttct tgcaccctat CD 751 tcaggttgcg cgatgggaga atattttcga gataatggga tgcacgcatt CD 801 aatcatctat gatgatctga gtaagcaagc agtggcatat cggcagatgt CD 851 cattattatt acgtcgacca cctggccgtg aggcgttccc aggggatgtc CD 901 ttctatccac attctcgttt gtcagaaaga gccgctaaga tgtcagacca CD 951 gactggcgca ggtagcttga ctgcattacc tgtgattgaa acacaagctg CD 1001 gagacgtatc tgcttatatt cccaccaatg tgattcccat tacagatgga CD 1051 caaatctttt tggaaacaga actcttttat cgtggaattc gacctgctat CD 1101 taacgcggga ttatctgtga gtcgcgtcgg ttctgcggct cagttgaaag CD 1151 ctatgaaaca agtatgtggt agcttaaaac tagaattggc acagtatcgt CD 1201 gaggtagccg cttctgctca attcggttca gaccctgatg ctgctactaa CD 1251 gtatttatca aatcgtggag ctaggctaac ggaagttcct aaacaaccac CD 1301 agtatagccc aattccaatt gagaaacaaa ttgtggttat tcatgcagct CD 1351 gtcaaaggtt atttagatga aattcctatt tcaattatta atgaatatga CD 1401 acatgagcca ttgaagtcta ttgatccaag tatactttct gctattgtta CD 1451 aacaaaaaag catctctgag gaaattaaca gtcaacttgc gacctttcgc CD 1501 aaaaaattga cacagagctt cttagcaact cattcggttt ga SQ SEQUENCE 514 AA; MNKFAGTEPS TLLEQRITNY YTKLQVDEIG RVVSVGDGIA RVYGSNKIQA GEMVEFASGV KGMALNLEKE NVGIVVFGSD TAIKEGDIVR RTGSIVDVPV GKAILGRVVD ALGVPIDGKG ALGAVERRRV EVKAPGIIAR KSVHEPMQTG LKAVDSLVPI GRGQREPIIG DRQTGKTAVA IDTISNQKEI NAQGTSNSEK LYCVYVAIGQ KRSTVAQLVK TLSEAGALEY CIILAASASD HAPLQFLAPY SGCAMGEYFR DNGMHALIIY DDLSKQAVAY RQMSLLLRRP PGREAFPGDV FYPHSRLSER AAKMSDQTGA GSLTALPVIE TQAGDVSAYI PTNVIPITDG QIFLETELFY RGIRPAINAG LSVSRVGSAA QLKAMKQVCG SLKLELAQYR EVAASAQFGS DPDAATKYLS NRGARLTEVP KQPQYSPIPI EKQIVVIHAA VKGYLDEIPI SIINEYEHEP LKSIDPSILS AIVKQKSISE EINSQLATFR KKLTQSFLAT HSV* // ID EU660574_20 STANDARD; PRT; 192 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : nad9 FT NOTE : FT LOCUS_TAG : MeaeMp26 FT PROTEIN_ID : ACC86788.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 66/0 FT INTRON 151/1 FT EDITING : 112 *(Tga) -> R(Cga) FT EDITING : 143 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 576 NT; CD 1 atggataagc aattgtttct caaatctctg atagctactt taccgaaacg CD 51 gatacatcaa tttaaaacat cgaaacatga aaatatatta tataccaatc CD 101 cagattacct gtttgaatta ctatggttcc cgaaacatca taccaataca CD 151 cgttttcaag ttttgattga tattcgcgga gttgattatc cctctcgaaa CD 201 acgaagattc gaagtagttc ataattcacc gagtattcgg tataattcac CD 251 gtattcgtgt agaaagcagt gtaaatgaaa taactccaat ttgttcggta CD 301 gtcggtatat ttccatcagc cggctggtgg gagTgagagg tatgggatat CD 351 gtttggtgcg tattcttcta atcatcctga ttcacgccgt atatcaatag CD 401 attatggttc tgagggtcat ctgttaTgaa aagaccttcc tttaagtgga CD 451 tacttcgagg tacgctatga tgattcggaa aaacgcgtgg tttctgaacc CD 501 tattgagatg actcaagaat ctcgctattt tgattttgcc agtccttggg CD 551 aagtcgcgtc gttacgaatc aaatga FT EDITED CDNA CD 1 atggataagc aattgtttct caaatctctg atagctactt taccgaaacg CD 51 gatacatcaa tttaaaacat cgaaacatga aaatatatta tataccaatc CD 101 cagattacct gtttgaatta ctatggttcc cgaaacatca taccaataca CD 151 cgttttcaag ttttgattga tattcgcgga gttgattatc cctctcgaaa CD 201 acgaagattc gaagtagttc ataattcacc gagtattcgg tataattcac CD 251 gtattcgtgt agaaagcagt gtaaatgaaa taactccaat ttgttcggta CD 301 gtcggtatat ttccatcagc cggctggtgg gagCgagagg tatgggatat CD 351 gtttggtgcg tattcttcta atcatcctga ttcacgccgt atatcaatag CD 401 attatggttc tgagggtcat ctgttaCgaa aagaccttcc tttaagtgga CD 451 tacttcgagg tacgctatga tgattcggaa aaacgcgtgg tttctgaacc CD 501 tattgagatg actcaagaat ctcgctattt tgattttgcc agtccttggg CD 551 aagtcgcgtc gttacgaatc aaatga SQ SEQUENCE 192 AA; MDKQLFLKSL IATLPKRIHQ FKTSKHENIL YTNPDYLFEL LWFPKHHTNT RFQVLIDIRG VDYPSRKRRF EVVHNSPSIR YNSRIRVESS VNEITPICSV VGIFPSAGWW EREVWDMFGA YSSNHPDSRR ISIDYGSEGH LLRKDLPLSG YFEVRYDDSE KRVVSEPIEM TQESRYFDFA SPWEVASLRI K* // ID EU660574_24 STANDARD; PRT; 329 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : nad1 FT NOTE : FT LOCUS_TAG : MeaeMp30 FT PROTEIN_ID : ACC86792.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 96/2 FT INTRON 117/0 FT INTRON 243/2 FT EDITING : 142 *(Tga) -> R(Cga) FT EDITING : 146 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 987 NT; CD 1 atgaaacttt atatcattgg tattttagca aaaatacttg gaatagtaat CD 51 accaccttta ctaggagtag cccttctagt ttcagctgaa tgtaaagtaa CD 101 cggcctctat gcaacgtaga aagggtctta atgtagtagg attgttcgga CD 151 tcgttacaac ccttagcaga tggtttgaaa ttaatgataa aagaacttat CD 201 tctaccgagt agtgctaatt tatttatttc tataatggct ccagtaatta CD 251 catttatgtc aagttcggtt gcttgggctg ttataccttt tgattatggt CD 301 atggtattgt cagattcaaa tgtaggtata cttcatctat tcgctatatc CD 351 ttctctaggt gtttatggga ttattacggt gggtcgggtt agtaatccaa CD 401 aatatgcgtc ttcaggagca tcaTgatctg cagctTaaac ggttctttat CD 451 gaagtttcta ttggtcccat tattattact gtatcaatcc gtgtaggtcc CD 501 tcgtaatctt agtgagattg tcatggcgca aaagcagata tggttcggca CD 551 ttcctttgtt tcctgtattg attatgtttt tcatttctcg tctagcagaa CD 601 actaataggg ctttttctga tccaccagaa gcagaagcgg aatcagtcgc CD 651 gggctataat gtagaatatc ctctaatggg gtttgctccc ccttccctag CD 701 gagagtatgc taatatgatt ttaatgagta gtctatgtac attgccctct CD 751 ttaggaggtt ggccgcctat cccagatttt cctattttcg aggcgatttc CD 801 gggctctatt tggttcagta tcaaggttct tttctttccg cccatacata CD 851 tacgggtccg tgcagcattt ccaagatatc gttatgatca atcaatgaga CD 901 cttggctgga aagtattctt gcctttatca ttagcacggg tagtctttgt CD 951 atctggtatt ccagtagcct ttgactggct cccgtaa FT EDITED CDNA CD 1 atgaaacttt atatcattgg tattttagca aaaatacttg gaatagtaat CD 51 accaccttta ctaggagtag cccttctagt ttcagctgaa tgtaaagtaa CD 101 cggcctctat gcaacgtaga aagggtctta atgtagtagg attgttcgga CD 151 tcgttacaac ccttagcaga tggtttgaaa ttaatgataa aagaacttat CD 201 tctaccgagt agtgctaatt tatttatttc tataatggct ccagtaatta CD 251 catttatgtc aagttcggtt gcttgggctg ttataccttt tgattatggt CD 301 atggtattgt cagattcaaa tgtaggtata cttcatctat tcgctatatc CD 351 ttctctaggt gtttatggga ttattacggt gggtcgggtt agtaatccaa CD 401 aatatgcgtc ttcaggagca tcaCgatctg cagctCaaac ggttctttat CD 451 gaagtttcta ttggtcccat tattattact gtatcaatcc gtgtaggtcc CD 501 tcgtaatctt agtgagattg tcatggcgca aaagcagata tggttcggca CD 551 ttcctttgtt tcctgtattg attatgtttt tcatttctcg tctagcagaa CD 601 actaataggg ctttttctga tccaccagaa gcagaagcgg aatcagtcgc CD 651 gggctataat gtagaatatc ctctaatggg gtttgctccc ccttccctag CD 701 gagagtatgc taatatgatt ttaatgagta gtctatgtac attgccctct CD 751 ttaggaggtt ggccgcctat cccagatttt cctattttcg aggcgatttc CD 801 gggctctatt tggttcagta tcaaggttct tttctttccg cccatacata CD 851 tacgggtccg tgcagcattt ccaagatatc gttatgatca atcaatgaga CD 901 cttggctgga aagtattctt gcctttatca ttagcacggg tagtctttgt CD 951 atctggtatt ccagtagcct ttgactggct cccgtaa SQ SEQUENCE 329 AA; MKLYIIGILA KILGIVIPPL LGVALLVSAE CKVTASMQRR KGLNVVGLFG SLQPLADGLK LMIKELILPS SANLFISIMA PVITFMSSSV AWAVIPFDYG MVLSDSNVGI LHLFAISSLG VYGIITVGRV SNPKYASSGA SRSAAQTVLY EVSIGPIIIT VSIRVGPRNL SEIVMAQKQI WFGIPLFPVL IMFFISRLAE TNRAFSDPPE AEAESVAGYN VEYPLMGFAP PSLGEYANMI LMSSLCTLPS LGGWPPIPDF PIFEAISGSI WFSIKVLFFP PIHIRVRAAF PRYRYDQSMR LGWKVFLPLS LARVVFVSGI PVAFDWLP* // ID EU660574_25 STANDARD; PRT; 523 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : cox1 FT NOTE : FT LOCUS_TAG : MeaeMp31 FT PROTEIN_ID : ACC86793.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 15/2 FT INTRON 51/0 FT INTRON 433/2 FT EDITING : 494 *(Tag) -> Q(Cag) FT CODON_START : 1 CL CDNALEN 1569 NT; CD 1 atgaaaaatt ttgcacaaag atggcttttt tccacaaacc acaaagatat CD 51 aggtactcca cattcaattt tcggtgctat tgctggagta atgggtacat CD 101 gcttcttagt atcaattcgt atggaattag cacaacccgg caatcaaatt CD 151 ctcagtggaa atcatcaact ctataatgtg ttaataacag ctcacgcttt CD 201 tttaatgata tcttttatgg ttacgcctgc catgataggt ggatttggta CD 251 attggtttgt tccgattctc ataggtgcac ctgacatggc atttccacga CD 301 ttgaataata tcagttcttg gctattaccg ccgtcactgc tacttctttt CD 351 aagtcctgct ttggtagaag ttggcgcagg taccggctgg acggtctatc CD 401 cgcctctaag tggtataacg agtcattccg gaggagccgt tgatttagcc CD 451 atttttagtc ttcatctatc aggtgtttca cttatttcag gtgctattaa CD 501 tcttatcagt actatcttta atatgcgcgg ccctggaatg actatgcata CD 551 aattgccttt atttgtgtgg cctgttttag tgacagcatt cctactctta CD 601 ttatcccttc cagtactggc aggtgccatt accatgttat taactgatag CD 651 aaactttaat accacctctt ttgatcccgc gggaggagga gatccgattt CD 701 tataccagca tccattttgg tctttcggtc atccagaggt tcatattcca CD 751 attttgccag gattcggtat aattagtcat atcgtttcca cgtttccaag CD 801 aaaacctgta ttcggttatc taggcatggt ttatgtcacg atcagtattg CD 851 gagttctcgg atttatcgtg tgggcacacc acatgtttac tgtaggctta CD 901 gacgttgata ctcgtgccta ctttactgcg gctaccatga ttactgctgt CD 951 acctactgga attaagattt ttagttgggg cgctactatg tgggggggtt CD 1001 cgatagagta cacctcacct cttttttttg cagtaggtct tattttctta CD 1051 ctcaccgtgg gaggctgtac tggaatagta ttggccaatt ccgggctgga CD 1101 cattgctcca catgatactt attacgtggt tgcacatctt cattatgttc CD 1151 ttcctatggg agccgtttct gctttatttg caggatttta ttattggata CD 1201 ggtaaaatga cgggtctcca atatccagag actttaggtc taatacattt CD 1251 ttggattact ttctttggtg ttaacttaac ttccttccca acgtatttag CD 1301 aaccgcttgc aggtatgcca cgtcgcattc cagattatcc agatgcttac CD 1351 gccgggtgga atgcctttag tagttttggc tcatacgttt ctgtagtagg CD 1401 gatttcccgt ccttccgtag tgatttttct taccccaacc ggtgaaaaca CD 1451 agtatgctcc aagtccttgg gctgttgaaT agaattcaac gacacctgaa CD 1501 tggatggtac aaagccctcc agcatttcat acctttgaag aaattccagc CD 1551 tataaaagaa agtatttag FT EDITED CDNA CD 1 atgaaaaatt ttgcacaaag atggcttttt tccacaaacc acaaagatat CD 51 aggtactcca cattcaattt tcggtgctat tgctggagta atgggtacat CD 101 gcttcttagt atcaattcgt atggaattag cacaacccgg caatcaaatt CD 151 ctcagtggaa atcatcaact ctataatgtg ttaataacag ctcacgcttt CD 201 tttaatgata tcttttatgg ttacgcctgc catgataggt ggatttggta CD 251 attggtttgt tccgattctc ataggtgcac ctgacatggc atttccacga CD 301 ttgaataata tcagttcttg gctattaccg ccgtcactgc tacttctttt CD 351 aagtcctgct ttggtagaag ttggcgcagg taccggctgg acggtctatc CD 401 cgcctctaag tggtataacg agtcattccg gaggagccgt tgatttagcc CD 451 atttttagtc ttcatctatc aggtgtttca cttatttcag gtgctattaa CD 501 tcttatcagt actatcttta atatgcgcgg ccctggaatg actatgcata CD 551 aattgccttt atttgtgtgg cctgttttag tgacagcatt cctactctta CD 601 ttatcccttc cagtactggc aggtgccatt accatgttat taactgatag CD 651 aaactttaat accacctctt ttgatcccgc gggaggagga gatccgattt CD 701 tataccagca tccattttgg tctttcggtc atccagaggt tcatattcca CD 751 attttgccag gattcggtat aattagtcat atcgtttcca cgtttccaag CD 801 aaaacctgta ttcggttatc taggcatggt ttatgtcacg atcagtattg CD 851 gagttctcgg atttatcgtg tgggcacacc acatgtttac tgtaggctta CD 901 gacgttgata ctcgtgccta ctttactgcg gctaccatga ttactgctgt CD 951 acctactgga attaagattt ttagttgggg cgctactatg tgggggggtt CD 1001 cgatagagta cacctcacct cttttttttg cagtaggtct tattttctta CD 1051 ctcaccgtgg gaggctgtac tggaatagta ttggccaatt ccgggctgga CD 1101 cattgctcca catgatactt attacgtggt tgcacatctt cattatgttc CD 1151 ttcctatggg agccgtttct gctttatttg caggatttta ttattggata CD 1201 ggtaaaatga cgggtctcca atatccagag actttaggtc taatacattt CD 1251 ttggattact ttctttggtg ttaacttaac ttccttccca acgtatttag CD 1301 aaccgcttgc aggtatgcca cgtcgcattc cagattatcc agatgcttac CD 1351 gccgggtgga atgcctttag tagttttggc tcatacgttt ctgtagtagg CD 1401 gatttcccgt ccttccgtag tgatttttct taccccaacc ggtgaaaaca CD 1451 agtatgctcc aagtccttgg gctgttgaaC agaattcaac gacacctgaa CD 1501 tggatggtac aaagccctcc agcatttcat acctttgaag aaattccagc CD 1551 tataaaagaa agtatttag SQ SEQUENCE 523 AA; MKNFAQRWLF STNHKDIGTP HSIFGAIAGV MGTCFLVSIR MELAQPGNQI LSGNHQLYNV LITAHAFLMI SFMVTPAMIG GFGNWFVPIL IGAPDMAFPR LNNISSWLLP PSLLLLLSPA LVEVGAGTGW TVYPPLSGIT SHSGGAVDLA IFSLHLSGVS LISGAINLIS TIFNMRGPGM TMHKLPLFVW PVLVTAFLLL LSLPVLAGAI TMLLTDRNFN TTSFDPAGGG DPILYQHPFW SFGHPEVHIP ILPGFGIISH IVSTFPRKPV FGYLGMVYVT ISIGVLGFIV WAHHMFTVGL DVDTRAYFTA ATMITAVPTG IKIFSWGATM WGGSIEYTSP LFFAVGLIFL LTVGGCTGIV LANSGLDIAP HDTYYVVAHL HYVLPMGAVS ALFAGFYYWI GKMTGLQYPE TLGLIHFWIT FFGVNLTSFP TYLEPLAGMP RRIPDYPDAY AGWNAFSSFG SYVSVVGISR PSVVIFLTPT GENKYAPSPW AVEQNSTTPE WMVQSPPAFH TFEEIPAIKE SI* // ID EU660574_26 STANDARD; PRT; 184 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : atp4 FT NOTE : FT LOCUS_TAG : MeaeMp32 FT PROTEIN_ID : ACC86794.1 FT PROTEIN_NAME : ATP synthase F0 subunit b FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 106163 - 106714 FT DIRECTIONS : negative FT EDITING : 19 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 552 NT; CD 1 atgcgtgaat tgataatatt tgctattcca atttctagtg tttcgagtcc CD 51 taaaTaaatc ttaatttata atgaagaagt tcttgtagct cgtagtttta CD 101 ttggttttgt tatatttagt gaaaaaactt ttggtgaaac ttttgaagct CD 151 acttctaatg cgagaagcga agcaattttt tcagagttac agcaattgat CD 201 aagttctaaa gaggctctgt tgtccgagtt aaagaaacag catgaattat CD 251 gcagtataag cttgcgttca ggtacgcaaa tgattggaga atcatgcata CD 301 aatgatatgg ttacgcgctg tgcgcctaag tgcaaacaga cagtgcaagc CD 351 tatattatgc caacaaatgg aacagaagtt aaaaacactg ttagctattc CD 401 aagagcattc tcgcatgagt ttacaggaga agatagtcac ttgttttcgc CD 451 gaaacagttt gtgacgaatt tcgcttttcc aaattgcgaa aacatcagtc CD 501 taaactagtt caacaaagca tggtattatt gaaagatggg gttctgaaat CD 551 ga FT EDITED CDNA CD 1 atgcgtgaat tgataatatt tgctattcca atttctagtg tttcgagtcc CD 51 taaaCaaatc ttaatttata atgaagaagt tcttgtagct cgtagtttta CD 101 ttggttttgt tatatttagt gaaaaaactt ttggtgaaac ttttgaagct CD 151 acttctaatg cgagaagcga agcaattttt tcagagttac agcaattgat CD 201 aagttctaaa gaggctctgt tgtccgagtt aaagaaacag catgaattat CD 251 gcagtataag cttgcgttca ggtacgcaaa tgattggaga atcatgcata CD 301 aatgatatgg ttacgcgctg tgcgcctaag tgcaaacaga cagtgcaagc CD 351 tatattatgc caacaaatgg aacagaagtt aaaaacactg ttagctattc CD 401 aagagcattc tcgcatgagt ttacaggaga agatagtcac ttgttttcgc CD 451 gaaacagttt gtgacgaatt tcgcttttcc aaattgcgaa aacatcagtc CD 501 taaactagtt caacaaagca tggtattatt gaaagatggg gttctgaaat CD 551 ga SQ SEQUENCE 184 AA; MRELIIFAIP ISSVSSPKQI LIYNEEVLVA RSFIGFVIFS EKTFGETFEA TSNARSEAIF SELQQLISSK EALLSELKKQ HELCSISLRS GTQMIGESCI NDMVTRCAPK CKQTVQAILC QQMEQKLKTL LAIQEHSRMS LQEKIVTCFR ETVCDEFRFS KLRKHQSKLV QQSMVLLKDG VLK* // ID EU660574_28 STANDARD; PRT; 159 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : ORF-bryo1 FT NOTE : FT LOCUS_TAG : MeaeMp37 FT PROTEIN_ID : ACC86796.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 118155 - 118631 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 2 *(Taa) -> Q(Caa) FT EDITING : 37 *(Taa) -> Q(Caa) FT EDITING : 95 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 477 NT; CD 1 aCgTaagtta gaaaaatttt tctgaagaaa aaagcacaag agattaataa CD 51 acaatctcca tatattcttt tatttcatcg tagtggctta ataagtgaac CD 101 aatggcgaTa atccaaaaat ctattgtgtg caattcatgg tggaacgttc CD 151 ttttggccaa gtcgcaatag gaaacaggca catgaaaaca agcaaaatag CD 201 ttttcttgca cagcatgctt ccaaagcagg cccgacttgt ttcttgtatt CD 251 tgactaaaaa aacaccggac gatacgtggt caTaattgca accttcggcc CD 301 tcctacaacc agaatctagt ttcattatac ggaaaactcg gatctacttt CD 351 gctcaattat atggatatat acgaagctgc tgatttagaa attacatcag CD 401 tttttaaaga atcgttttgg cttttgtttc acccatctta tgagtcgtgt CD 451 ctttgcttta accagccaac gaagtga FT EDITED CDNA CD 1 aTgCaagtta gaaaaatttt tctgaagaaa aaagcacaag agattaataa CD 51 acaatctcca tatattcttt tatttcatcg tagtggctta ataagtgaac CD 101 aatggcgaCa atccaaaaat ctattgtgtg caattcatgg tggaacgttc CD 151 ttttggccaa gtcgcaatag gaaacaggca catgaaaaca agcaaaatag CD 201 ttttcttgca cagcatgctt ccaaagcagg cccgacttgt ttcttgtatt CD 251 tgactaaaaa aacaccggac gatacgtggt caCaattgca accttcggcc CD 301 tcctacaacc agaatctagt ttcattatac ggaaaactcg gatctacttt CD 351 gctcaattat atggatatat acgaagctgc tgatttagaa attacatcag CD 401 tttttaaaga atcgttttgg cttttgtttc acccatctta tgagtcgtgt CD 451 ctttgcttta accagccaac gaagtga SQ SEQUENCE 159 AA; MQVRKIFLKK KAQEINKQSP YILLFHRSGL ISEQWRQSKN LLCAIHGGTF FWPSRNRKQA HENKQNSFLA QHASKAGPTC FLYLTKKTPD DTWSQLQPSA SYNQNLVSLY GKLGSTLLNY MDIYEAADLE ITSVFKESFW LLFHPSYESC LCFNQPTK* // ID EU660574_30 STANDARD; PRT; 677 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : nad5 FT NOTE : FT LOCUS_TAG : MeaeMp39 FT PROTEIN_ID : ACC86798.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 5 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 77/2 FT INTRON 486/0 FT INTRON 493/1 FT EDITING : 26 *(Tga) -> R(Cga) FT EDITING : 112 *(Tga) -> R(Cga) FT EDITING : 135 *(Taa) -> Q(Caa) FT EDITING : 172 *(Tga) -> R(Cga) FT EDITING : 238 *(Taa) -> Q(Caa) FT EDITING : 615 *(Taa) -> Q(Caa) FT EDITING : 620 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 2031 NT; CD 1 atgtatttac taatcgtcac tttacctttg ccaggtagtt tcgtagcagg CD 51 tgcctttggt cgttttcctg gttcaTgagg aactgctaca atcacaacca CD 101 tgtgtgtctc attatcttgt attttccctt tgattgcctt ttatgaagtt CD 151 gcactgggag ctagtgtttg ctatataaag attgcttcat ggattatctc CD 201 ggagatgttt gatgcttttc ggggctcctt gtctgatagt ctgactgtag CD 251 ttatgctaat tgtggttaca tttgtaagta gcttggttca tctttatccc CD 301 atttcacata tgtccgagga tccgcatagc tcaTgattta tgtgttattt CD 351 atctattcct acttttttta tgccaatgcc ggttaccgga gataactcta CD 401 ttTaattatt tctaggatgg gagggagtcg gtcctgcttt atatttgtca CD 451 attaattttt ggttcacgag acttcaggcc aataaagcag ctatcaaagc CD 501 tatgcctgtg aatTgagtag gtgactttgg attagctccc gggattatgg CD 551 gtggttttac cctttttcaa acagtagact tttctactat ttttgctcgt CD 601 gctagtgctt tctctgaacc caaccatttc tttgtttttt gtaatatgag CD 651 atttcatgct ataactgtta tttgtatttt accgctcatt ggcgctgtcg CD 701 gaaaatctgc aTaaatagga ttgcatactt ggttacccga cgtcatggag CD 751 ggtcccactc cagtatccgc ttcgattcat gcagctacta cggtcacagc CD 801 aggcgttttt atgatagcga ggtgccctcc cttatttgaa tacccgccta CD 851 atgctttgat tgttgttact cctgtaggag ctatgacgcc attctttgcg CD 901 gcaaccacag gaatattaca gaacgatttg aagagggtca tagcttattc CD 951 catttgtagt caatcaggct atatgatctt cgcttgcggc atttccaact CD 1001 attctgttag cgtatttcac ttgatgaatc atgcttttct taaagcatca CD 1051 ccctttttga gtgcaggtcc agtgattcat gccatgtcgg atgagcaaga CD 1101 tatgcgtaag atgggaggac ttgcttccct gttacccttt acctatgcta CD 1151 tgatgcttat aggcagctta tctccaatcg gatttccttt tttaactgga CD 1201 ttttattcca aagatgtgat tctggagcct gcttacacta aatatacaat CD 1251 tagtggtaac tctgctttct ggttgggaag tgtctctgtc ttcttcactt CD 1301 cttaccactt ctttcgctta ctcttcttaa cattcttagc accaaccaat CD 1351 tcattcaagc aagacatgtt acgatgtcat gatgcgccca ttctcatggc CD 1401 aatcccttta atctgtttgg cttttggaag tatttctgta ggacacttgg CD 1451 ccaaagatat gatgattggc ttaggtacta atttttgggc taattctgtt CD 1501 ttcatatcac ccaaaaatga gattcttgct gaatctgagt ttgctactcc CD 1551 aaccattata aaactaattc ctatcctgtt tagtacttta ggcgcatttg CD 1601 tggcgtataa tgtcaatttt atagcaaatg aatttatctt cgctttgaaa CD 1651 acaacttctt ttggtaatgg actatattgc ttcttaaata agcgttggtt CD 1701 ctttgataaa gtctttaatg acttcatagt gagatctttt ttacgttttg CD 1751 gatatgaagt gtcatttaaa gctttagaca agggtgctat tgaaatcttg CD 1801 ggtccttatg ggatttcgta cacatttgga gaattagcta agTaaataag CD 1851 taaacttTaa agtggatttg tttatcatta cgctttcgct atgctgattg CD 1901 gtttaaccat atttattact attataggtc tgtgggattt tctctccttt CD 1951 tgggtagata atagattgta ttttatttac acagtgactt tctcttttat CD 2001 taatcttgag ggagacattc gcacaaatta a FT EDITED CDNA CD 1 atgtatttac taatcgtcac tttacctttg ccaggtagtt tcgtagcagg CD 51 tgcctttggt cgttttcctg gttcaCgagg aactgctaca atcacaacca CD 101 tgtgtgtctc attatcttgt attttccctt tgattgcctt ttatgaagtt CD 151 gcactgggag ctagtgtttg ctatataaag attgcttcat ggattatctc CD 201 ggagatgttt gatgcttttc ggggctcctt gtctgatagt ctgactgtag CD 251 ttatgctaat tgtggttaca tttgtaagta gcttggttca tctttatccc CD 301 atttcacata tgtccgagga tccgcatagc tcaCgattta tgtgttattt CD 351 atctattcct acttttttta tgccaatgcc ggttaccgga gataactcta CD 401 ttCaattatt tctaggatgg gagggagtcg gtcctgcttt atatttgtca CD 451 attaattttt ggttcacgag acttcaggcc aataaagcag ctatcaaagc CD 501 tatgcctgtg aatCgagtag gtgactttgg attagctccc gggattatgg CD 551 gtggttttac cctttttcaa acagtagact tttctactat ttttgctcgt CD 601 gctagtgctt tctctgaacc caaccatttc tttgtttttt gtaatatgag CD 651 atttcatgct ataactgtta tttgtatttt accgctcatt ggcgctgtcg CD 701 gaaaatctgc aCaaatagga ttgcatactt ggttacccga cgtcatggag CD 751 ggtcccactc cagtatccgc ttcgattcat gcagctacta cggtcacagc CD 801 aggcgttttt atgatagcga ggtgccctcc cttatttgaa tacccgccta CD 851 atgctttgat tgttgttact cctgtaggag ctatgacgcc attctttgcg CD 901 gcaaccacag gaatattaca gaacgatttg aagagggtca tagcttattc CD 951 catttgtagt caatcaggct atatgatctt cgcttgcggc atttccaact CD 1001 attctgttag cgtatttcac ttgatgaatc atgcttttct taaagcatca CD 1051 ccctttttga gtgcaggtcc agtgattcat gccatgtcgg atgagcaaga CD 1101 tatgcgtaag atgggaggac ttgcttccct gttacccttt acctatgcta CD 1151 tgatgcttat aggcagctta tctccaatcg gatttccttt tttaactgga CD 1201 ttttattcca aagatgtgat tctggagcct gcttacacta aatatacaat CD 1251 tagtggtaac tctgctttct ggttgggaag tgtctctgtc ttcttcactt CD 1301 cttaccactt ctttcgctta ctcttcttaa cattcttagc accaaccaat CD 1351 tcattcaagc aagacatgtt acgatgtcat gatgcgccca ttctcatggc CD 1401 aatcccttta atctgtttgg cttttggaag tatttctgta ggacacttgg CD 1451 ccaaagatat gatgattggc ttaggtacta atttttgggc taattctgtt CD 1501 ttcatatcac ccaaaaatga gattcttgct gaatctgagt ttgctactcc CD 1551 aaccattata aaactaattc ctatcctgtt tagtacttta ggcgcatttg CD 1601 tggcgtataa tgtcaatttt atagcaaatg aatttatctt cgctttgaaa CD 1651 acaacttctt ttggtaatgg actatattgc ttcttaaata agcgttggtt CD 1701 ctttgataaa gtctttaatg acttcatagt gagatctttt ttacgttttg CD 1751 gatatgaagt gtcatttaaa gctttagaca agggtgctat tgaaatcttg CD 1801 ggtccttatg ggatttcgta cacatttgga gaattagcta agCaaataag CD 1851 taaacttCaa agtggatttg tttatcatta cgctttcgct atgctgattg CD 1901 gtttaaccat atttattact attataggtc tgtgggattt tctctccttt CD 1951 tgggtagata atagattgta ttttatttac acagtgactt tctcttttat CD 2001 taatcttgag ggagacattc gcacaaatta a SQ SEQUENCE 677 AA; MYLLIVTLPL PGSFVAGAFG RFPGSRGTAT ITTMCVSLSC IFPLIAFYEV ALGASVCYIK IASWIISEMF DAFRGSLSDS LTVVMLIVVT FVSSLVHLYP ISHMSEDPHS SRFMCYLSIP TFFMPMPVTG DNSIQLFLGW EGVGPALYLS INFWFTRLQA NKAAIKAMPV NRVGDFGLAP GIMGGFTLFQ TVDFSTIFAR ASAFSEPNHF FVFCNMRFHA ITVICILPLI GAVGKSAQIG LHTWLPDVME GPTPVSASIH AATTVTAGVF MIARCPPLFE YPPNALIVVT PVGAMTPFFA ATTGILQNDL KRVIAYSICS QSGYMIFACG ISNYSVSVFH LMNHAFLKAS PFLSAGPVIH AMSDEQDMRK MGGLASLLPF TYAMMLIGSL SPIGFPFLTG FYSKDVILEP AYTKYTISGN SAFWLGSVSV FFTSYHFFRL LFLTFLAPTN SFKQDMLRCH DAPILMAIPL ICLAFGSISV GHLAKDMMIG LGTNFWANSV FISPKNEILA ESEFATPTII KLIPILFSTL GAFVAYNVNF IANEFIFALK TTSFGNGLYC FLNKRWFFDK VFNDFIVRSF LRFGYEVSFK ALDKGAIEIL GPYGISYTFG ELAKQISKLQ SGFVYHYAFA MLIGLTIFIT IIGLWDFLSF WVDNRLYFIY TVTFSFINLE GDIRTN* // ID EU660574_33 STANDARD; PRT; 497 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : nad4 FT NOTE : FT LOCUS_TAG : MeaeMp42 FT PROTEIN_ID : ACC86801.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 154/2 FT INTRON 327/1 FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 67 *(Taa) -> Q(Caa) FT EDITING : 202 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 1491 NT; CD 1 aCgttacaat ttccagcttc acctcatctc aatctaagtg gtcttatttt CD 51 gcgtcctttg ttgggaagca ttattcttct cgttatccct gattcaagaa CD 101 tccaactgat acgaagtatt ggtctgcgca cctttttgat cactttctta CD 151 tattctccct ttctttggat agaattcgat aattctacag ccaaattcTa CD 201 atttgtggaa agcattcgat ggcttcctta ttcaaacatc aatttctata CD 251 taggtataga tggtatctct ttatcttttg tggtcttgac cacgtttcta CD 301 attcctattc gcatcttagt aggttggtcc agtaccaaga gttataagaa CD 351 agagtatatg atagcgtttt taatttgtga atctcttatg attgctgtgt CD 401 ctcgcatgcc ggatccttta ctatctcatg tctttcttga aagcgtgtca CD 451 attctcatgt ttcttatcat tatagggata tggggctcta gacaaagaaa CD 501 aatacaagcg gcatatcagt ttttcttata taccttactt ggatctgtgt CD 551 ttatgctctt agccatctca tctatttctt tccaaacagg aactactgat CD 601 ttaTgaatat tattaaccac agaatttagt gagcggcgcc aagttttgct CD 651 acggattgct tttttcgctt cttttgctgt gaaagtgcct atggtacctg CD 701 ttcatatttg gttacccgaa gctcatgtag aggcacctac ggctggatct CD 751 gtaattttgg caggaatttt atcaaaattg ggaacctatg gttttttaag CD 801 attttccata cccatgtttc ctgaagcgac cttttttttc attcccttca CD 851 tttgtactct aagcgtgatt gctattatat atactccctt gactacagtg CD 901 agacaaatcg atctgaaaaa aatgattgcc tactcttcag tagctcatat CD 951 gaattttgtg actattggta tgttcagtct aaacatacag ggaattgaag CD 1001 gtagcatttc acttatgtta agtcacggac ttgtttcctt agcccctcct CD 1051 ccatgtgttg gtgccctata tgacagacat aagactcgac ttgttaaata CD 1101 ttatggaggg ttagttagca ccatgccaat tttctgtacc atttccttat CD 1151 ttttcacttt agcgaatatg agtttaccgg gtagtagcag ctttatcggg CD 1201 gaatttccca tcccaacagg agctttcgaa aggaatagct tagtggccac CD 1251 actagcggca ctcgggatga ttctaggcgc agcttattct cctcggttac CD 1301 ataatcgtgt ggtttttggg aatttcaaac ctaatttcct aaaaaaattt CD 1351 tccgattcaa atagaagaga agttttcatt tttttaccct ttattgttgg CD 1401 agttattcgg atgggtgttt accctgaagt gttcttagag tgtatgcata CD 1451 cttgtgtgag taacttagtg caacatggaa aatttgatta a FT EDITED CDNA CD 1 aTgttacaat ttccagcttc acctcatctc aatctaagtg gtcttatttt CD 51 gcgtcctttg ttgggaagca ttattcttct cgttatccct gattcaagaa CD 101 tccaactgat acgaagtatt ggtctgcgca cctttttgat cactttctta CD 151 tattctccct ttctttggat agaattcgat aattctacag ccaaattcCa CD 201 atttgtggaa agcattcgat ggcttcctta ttcaaacatc aatttctata CD 251 taggtataga tggtatctct ttatcttttg tggtcttgac cacgtttcta CD 301 attcctattc gcatcttagt aggttggtcc agtaccaaga gttataagaa CD 351 agagtatatg atagcgtttt taatttgtga atctcttatg attgctgtgt CD 401 ctcgcatgcc ggatccttta ctatctcatg tctttcttga aagcgtgtca CD 451 attctcatgt ttcttatcat tatagggata tggggctcta gacaaagaaa CD 501 aatacaagcg gcatatcagt ttttcttata taccttactt ggatctgtgt CD 551 ttatgctctt agccatctca tctatttctt tccaaacagg aactactgat CD 601 ttaCgaatat tattaaccac agaatttagt gagcggcgcc aagttttgct CD 651 acggattgct tttttcgctt cttttgctgt gaaagtgcct atggtacctg CD 701 ttcatatttg gttacccgaa gctcatgtag aggcacctac ggctggatct CD 751 gtaattttgg caggaatttt atcaaaattg ggaacctatg gttttttaag CD 801 attttccata cccatgtttc ctgaagcgac cttttttttc attcccttca CD 851 tttgtactct aagcgtgatt gctattatat atactccctt gactacagtg CD 901 agacaaatcg atctgaaaaa aatgattgcc tactcttcag tagctcatat CD 951 gaattttgtg actattggta tgttcagtct aaacatacag ggaattgaag CD 1001 gtagcatttc acttatgtta agtcacggac ttgtttcctt agcccctcct CD 1051 ccatgtgttg gtgccctata tgacagacat aagactcgac ttgttaaata CD 1101 ttatggaggg ttagttagca ccatgccaat tttctgtacc atttccttat CD 1151 ttttcacttt agcgaatatg agtttaccgg gtagtagcag ctttatcggg CD 1201 gaatttccca tcccaacagg agctttcgaa aggaatagct tagtggccac CD 1251 actagcggca ctcgggatga ttctaggcgc agcttattct cctcggttac CD 1301 ataatcgtgt ggtttttggg aatttcaaac ctaatttcct aaaaaaattt CD 1351 tccgattcaa atagaagaga agttttcatt tttttaccct ttattgttgg CD 1401 agttattcgg atgggtgttt accctgaagt gttcttagag tgtatgcata CD 1451 cttgtgtgag taacttagtg caacatggaa aatttgatta a SQ SEQUENCE 497 AA; MLQFPASPHL NLSGLILRPL LGSIILLVIP DSRIQLIRSI GLRTFLITFL YSPFLWIEFD NSTAKFQFVE SIRWLPYSNI NFYIGIDGIS LSFVVLTTFL IPIRILVGWS STKSYKKEYM IAFLICESLM IAVSRMPDPL LSHVFLESVS ILMFLIIIGI WGSRQRKIQA AYQFFLYTLL GSVFMLLAIS SISFQTGTTD LRILLTTEFS ERRQVLLRIA FFASFAVKVP MVPVHIWLPE AHVEAPTAGS VILAGILSKL GTYGFLRFSI PMFPEATFFF IPFICTLSVI AIIYTPLTTV RQIDLKKMIA YSSVAHMNFV TIGMFSLNIQ GIEGSISLML SHGLVSLAPP PCVGALYDRH KTRLVKYYGG LVSTMPIFCT ISLFFTLANM SLPGSSSFIG EFPIPTGAFE RNSLVATLAA LGMILGAAYS PRLHNRVVFG NFKPNFLKKF SDSNRREVFI FLPFIVGVIR MGVYPEVFLE CMHTCVSNLV QHGKFD* // ID EU660574_34 STANDARD; PRT; 488 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : nad2 FT NOTE : FT LOCUS_TAG : MeaeMp43 FT PROTEIN_ID : ACC86802.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 235/1 FT INTRON 426/1 FT EDITING : 82 R(Cgc) -> C(Tgc) FT EDITING : 83 *(Taa) -> Q(Caa) FT EDITING : 141 *(Taa) -> Q(Caa) FT EDITING : 280 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 1464 NT; CD 1 atgtttgacc atgatttctt agcacttttc ccagagatct ttcttattaa CD 51 cgcaactatc actttgctta tttatggagt tgtattgagt acctccgaaa CD 101 gatatgatta tccaccgtta gtttgtaatg tgggttggct tggttcacct CD 151 agtgttctaa taaccatctt attggttgcc gctggcgcac tggttgccaa CD 201 tttattctat aataatttga taatagacaa ttttacatat tttCgcTaaa CD 251 tttttccatc attaagtacg gctagtacta ttcttatgtg tttggattat CD 301 ttcaaagaag agagtttgaa tgcttttgaa tttattatat taattctacc CD 351 tcctatccgc agtatgcctc ttacgatttt ggcttacgat tcaattgcga CD 401 tgtattcagc tattgagcct Taaagtttat gtttctatgt gatcgcagca CD 451 tccaaaagag actctgaatt ttccacagaa gccggcttaa aatattttat CD 501 tttaggtgca ttttcatctg gaatattgtt gtttggttgt tccatgattc CD 551 atgggtttac tggagttacc aactttgagg aattagccaa gatctttact CD 601 ggatatgaaa tcactttatt cggtgctcaa tctagtggga tctttatggg CD 651 gattctattt atcgccgtag gttttttatt taaaataact gcagttcctt CD 701 ttcatatgtg ggcgcctgat gtatacgagg gttcacctac cctggttaca CD 751 gcatttttcc ccattgcacc taaaatatct attcttgcca atatgttacg CD 801 tgtctttatt tatagtttct atgatccgac atggcaaTaa ctattctttt CD 851 tctgcagcat tgcttctatg attttaggag cactggctgc catggcccaa CD 901 aacaaagtaa aaagactttt agcttatagt tctattggac acgtaggtta CD 951 tcttccaatt ggtttttcat gtggaaccat agaagggatt caatcactat CD 1001 taattgctat gtttatttat gtattaatga ctatcaatgt attcgtcata CD 1051 gttttagcac tacgtcaaaa ccgcctcaaa tatatagcgg atttaggtgc CD 1101 tttagccaaa actaatcgta ttttagcaat taccttgcct attactatgt CD 1151 tttcatacgc aggaatacct ccgttagctg gattttgtag caaattctat CD 1201 ttattttccg ccgctccagg ctgtggagct tactcactag cttttgtagg CD 1251 aatagttact agcgttatca gttgttttca ttacatacgc ttcgtgaaaa CD 1301 taatgtattt cgatacaccc gaaacatgga ttatatataa acccatggat CD 1351 cgtgagaaat cgttactatt agcaattact ttatttccta ccacttcttt CD 1401 ctttctatat ccttctccct cgtttttagt tactcacgaa atggcaccaa CD 1451 gtttatgttt gtaa FT EDITED CDNA CD 1 atgtttgacc atgatttctt agcacttttc ccagagatct ttcttattaa CD 51 cgcaactatc actttgctta tttatggagt tgtattgagt acctccgaaa CD 101 gatatgatta tccaccgtta gtttgtaatg tgggttggct tggttcacct CD 151 agtgttctaa taaccatctt attggttgcc gctggcgcac tggttgccaa CD 201 tttattctat aataatttga taatagacaa ttttacatat tttTgcCaaa CD 251 tttttccatc attaagtacg gctagtacta ttcttatgtg tttggattat CD 301 ttcaaagaag agagtttgaa tgcttttgaa tttattatat taattctacc CD 351 tcctatccgc agtatgcctc ttacgatttt ggcttacgat tcaattgcga CD 401 tgtattcagc tattgagcct Caaagtttat gtttctatgt gatcgcagca CD 451 tccaaaagag actctgaatt ttccacagaa gccggcttaa aatattttat CD 501 tttaggtgca ttttcatctg gaatattgtt gtttggttgt tccatgattc CD 551 atgggtttac tggagttacc aactttgagg aattagccaa gatctttact CD 601 ggatatgaaa tcactttatt cggtgctcaa tctagtggga tctttatggg CD 651 gattctattt atcgccgtag gttttttatt taaaataact gcagttcctt CD 701 ttcatatgtg ggcgcctgat gtatacgagg gttcacctac cctggttaca CD 751 gcatttttcc ccattgcacc taaaatatct attcttgcca atatgttacg CD 801 tgtctttatt tatagtttct atgatccgac atggcaaCaa ctattctttt CD 851 tctgcagcat tgcttctatg attttaggag cactggctgc catggcccaa CD 901 aacaaagtaa aaagactttt agcttatagt tctattggac acgtaggtta CD 951 tcttccaatt ggtttttcat gtggaaccat agaagggatt caatcactat CD 1001 taattgctat gtttatttat gtattaatga ctatcaatgt attcgtcata CD 1051 gttttagcac tacgtcaaaa ccgcctcaaa tatatagcgg atttaggtgc CD 1101 tttagccaaa actaatcgta ttttagcaat taccttgcct attactatgt CD 1151 tttcatacgc aggaatacct ccgttagctg gattttgtag caaattctat CD 1201 ttattttccg ccgctccagg ctgtggagct tactcactag cttttgtagg CD 1251 aatagttact agcgttatca gttgttttca ttacatacgc ttcgtgaaaa CD 1301 taatgtattt cgatacaccc gaaacatgga ttatatataa acccatggat CD 1351 cgtgagaaat cgttactatt agcaattact ttatttccta ccacttcttt CD 1401 ctttctatat ccttctccct cgtttttagt tactcacgaa atggcaccaa CD 1451 gtttatgttt gtaa SQ SEQUENCE 488 AA; MFDHDFLALF PEIFLINATI TLLIYGVVLS TSERYDYPPL VCNVGWLGSP SVLITILLVA AGALVANLFY NNLIIDNFTY FCQIFPSLST ASTILMCLDY FKEESLNAFE FIILILPPIR SMPLTILAYD SIAMYSAIEP QSLCFYVIAA SKRDSEFSTE AGLKYFILGA FSSGILLFGC SMIHGFTGVT NFEELAKIFT GYEITLFGAQ SSGIFMGILF IAVGFLFKIT AVPFHMWAPD VYEGSPTLVT AFFPIAPKIS ILANMLRVFI YSFYDPTWQQ LFFFCSIASM ILGALAAMAQ NKVKRLLAYS SIGHVGYLPI GFSCGTIEGI QSLLIAMFIY VLMTINVFVI VLALRQNRLK YIADLGALAK TNRILAITLP ITMFSYAGIP PLAGFCSKFY LFSAAPGCGA YSLAFVGIVT SVISCFHYIR FVKIMYFDTP ETWIIYKPMD REKSLLLAIT LFPTTSFFLY PSPSFLVTHE MAPSLCL* // ID EU660574_35 STANDARD; PRT; 253 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : atp6 FT NOTE : FT LOCUS_TAG : MeaeMp46 FT PROTEIN_ID : ACC86803.1 FT PROTEIN_NAME : ATP synthase F0 subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 27/2 FT INTRON 147/1 FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 77 *(Taa) -> Q(Caa) FT EDITING : 86 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 759 NT; CD 1 aCggcttgca gtccaccaga acaatttgca attattccat tgattcctat CD 51 tcatatagga aacttgtatt ctccatctac caattcatct ttgttcatgc CD 101 caccaactct cagtctagta ttgcttctag tttatttcgt caccccgaat CD 151 ggaggacact tagtactaaa tgcttggcaa ctcttcgtgg aaatgattta CD 201 tgattttgtg tttaacttgg tgaacgaaTa aataagtggt ccttctttag CD 251 tgaaaTaacg gttttttttg tcgatatttg tcactttcac ttgtctacca CD 301 tttcgtaatt ttatcggtat gataccttat agttttacag taacaagtca CD 351 tttttcattt accttgggtc ttccattctc tccttcttct ggaacgactt CD 401 tacctggatt tcaaatacat gggcttcatt ttttcagttt cttcttacct CD 451 cgaggagtag cattgccgtt agctcctttc ttagtaatgc tcgagccgtt CD 501 tcctcatagt cttcgcgcat taagcttagg tatacgttta tccgccaata CD 551 tgatggctgg tcatagttca gtgaagattt caagtgggtt tgctcggact CD 601 atgctatcta tggggggtat tatgtattta gcacatcttg cccctctttt CD 651 ggtagtattc gcatcaactg gtttagaatt aggtgtcggt gtatcacaag CD 701 ctcatgttcc tactactcca aatcgcactt acctcaatga tgctataaac CD 751 cttcattaa FT EDITED CDNA CD 1 aTggcttgca gtccaccaga acaatttgca attattccat tgattcctat CD 51 tcatatagga aacttgtatt ctccatctac caattcatct ttgttcatgc CD 101 caccaactct cagtctagta ttgcttctag tttatttcgt caccccgaat CD 151 ggaggacact tagtactaaa tgcttggcaa ctcttcgtgg aaatgattta CD 201 tgattttgtg tttaacttgg tgaacgaaCa aataagtggt ccttctttag CD 251 tgaaaCaacg gttttttttg tcgatatttg tcactttcac ttgtctacca CD 301 tttcgtaatt ttatcggtat gataccttat agttttacag taacaagtca CD 351 tttttcattt accttgggtc ttccattctc tccttcttct ggaacgactt CD 401 tacctggatt tcaaatacat gggcttcatt ttttcagttt cttcttacct CD 451 cgaggagtag cattgccgtt agctcctttc ttagtaatgc tcgagccgtt CD 501 tcctcatagt cttcgcgcat taagcttagg tatacgttta tccgccaata CD 551 tgatggctgg tcatagttca gtgaagattt caagtgggtt tgctcggact CD 601 atgctatcta tggggggtat tatgtattta gcacatcttg cccctctttt CD 651 ggtagtattc gcatcaactg gtttagaatt aggtgtcggt gtatcacaag CD 701 ctcatgttcc tactactcca aatcgcactt acctcaatga tgctataaac CD 751 cttcattaa SQ SEQUENCE 253 AA; MACSPPEQFA IIPLIPIHIG NLYSPSTNSS LFMPPTLSLV LLLVYFVTPN GGHLVLNAWQ LFVEMIYDFV FNLVNEQISG PSLVKQRFFL SIFVTFTCLP FRNFIGMIPY SFTVTSHFSF TLGLPFSPSS GTTLPGFQIH GLHFFSFFLP RGVALPLAPF LVMLEPFPHS LRALSLGIRL SANMMAGHSS VKISSGFART MLSMGGIMYL AHLAPLLVVF ASTGLELGVG VSQAHVPTTP NRTYLNDAIN LH* // ID EU660574_38 STANDARD; PRT; 202 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : nad6 FT NOTE : FT LOCUS_TAG : MeaeMp49 FT PROTEIN_ID : ACC86806.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 149/0 FT EDITING : 133 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 606 NT; CD 1 atgatacttt tttctgttcc ttcgagcatt gctttagtct ccggtgttac CD 51 ggcgacacgt gccaaaaatc cagtccattc cgttttattt tcaatacccg CD 101 tctttcgcaa cacttcaggt ttacttgttt tgctaggtct cgaccccttc CD 151 gctatgattt ttttagtggt ttatgtagga gctattgctg tttcaccttc CD 201 atctgtagct acgacgtcga atattaaaat agcagaaatt cacgagaatg CD 251 tattgcgcta tttacctgta ggtggtatta ctggacttat tcttttgttg CD 301 gaaatatttt tcatcgtaga taatgattac attccaatat taccaacgaa CD 351 actgagtaca acctatctaa catatacagt ttatgctgga aagataTaaa CD 401 gttggactaa tttggaaacg ttaggcaatt tactttatac cacctatttt CD 451 acttcgttct tgttttctag tttcatttca ttggtagcca tgattggggc CD 501 tacagtactt actatgcata gaactactcg ggtcaaaaga caagatgtgt CD 551 tccgacaaaa tgctagagat tttcggaata ctataaaaaa aatcagaaag CD 601 atctga FT EDITED CDNA CD 1 atgatacttt tttctgttcc ttcgagcatt gctttagtct ccggtgttac CD 51 ggcgacacgt gccaaaaatc cagtccattc cgttttattt tcaatacccg CD 101 tctttcgcaa cacttcaggt ttacttgttt tgctaggtct cgaccccttc CD 151 gctatgattt ttttagtggt ttatgtagga gctattgctg tttcaccttc CD 201 atctgtagct acgacgtcga atattaaaat agcagaaatt cacgagaatg CD 251 tattgcgcta tttacctgta ggtggtatta ctggacttat tcttttgttg CD 301 gaaatatttt tcatcgtaga taatgattac attccaatat taccaacgaa CD 351 actgagtaca acctatctaa catatacagt ttatgctgga aagataCaaa CD 401 gttggactaa tttggaaacg ttaggcaatt tactttatac cacctatttt CD 451 acttcgttct tgttttctag tttcatttca ttggtagcca tgattggggc CD 501 tacagtactt actatgcata gaactactcg ggtcaaaaga caagatgtgt CD 551 tccgacaaaa tgctagagat tttcggaata ctataaaaaa aatcagaaag CD 601 atctga SQ SEQUENCE 202 AA; MILFSVPSSI ALVSGVTATR AKNPVHSVLF SIPVFRNTSG LLVLLGLDPF AMIFLVVYVG AIAVSPSSVA TTSNIKIAEI HENVLRYLPV GGITGLILLL EIFFIVDNDY IPILPTKLST TYLTYTVYAG KIQSWTNLET LGNLLYTTYF TSFLFSSFIS LVAMIGATVL TMHRTTRVKR QDVFRQNARD FRNTIKKIRK I* // ID EU660574_42 STANDARD; PRT; 252 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : cox2 FT NOTE : FT LOCUS_TAG : MeaeMp53 FT PROTEIN_ID : ACC86810.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 94/2 FT INTRON 125/1 FT EDITING : 23 *(Taa) -> Q(Caa) FT EDITING : 121 *(Taa) -> Q(Caa) FT EDITING : 218 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 756 NT; CD 1 atgaaaaaca catggctatt tccaattgct tatcgtgatg ctgccgaacc CD 51 ttggcaattg ggatttTaag acgcagcaac acctatgatg caaggaatga CD 101 ttgacttaca tcatgatatt tttttctttc tacccatcat tatgatcttt CD 151 gtattatgga tgttggttcg cgctttatgg catcttcact ataagagaaa CD 201 tccaattcca gaaaggattg ttcatggaac tactatagag attattcgga CD 251 ctatttttct tagtattatc tcgatgttta ttgctatacc atcttttgct CD 301 ttattatatt caatggacga ggtagtagat ccagctgtta ctatcaaagc CD 351 tattggacat Taatggtatt ggacttatga gtattcagac tataacagtt CD 401 ccgatgaaca gtcactaact tttgacagtt atatgattac ggaggatgag CD 451 ttagaattag gtgcattacg tttattagaa gtagacaata gagtgattgt CD 501 accagcgaaa actcatatcc gtctgattat cacatctgct gatgtacctt CD 551 atagttgggc tgtaccttcc tcaggtgtaa aatgcgatgc tgtacccggt CD 601 cgttcaaatc agacttccat ttttattaaa cgaaaaggag tttactatgg CD 651 tTaatgcagt gaaatttgtg gaaccaatca tgcgtttatg cctattgtcg CD 701 tagaagctgt ttctttggat gatcatgttt cttgggtatc taatgaatta CD 751 gactaa FT EDITED CDNA CD 1 atgaaaaaca catggctatt tccaattgct tatcgtgatg ctgccgaacc CD 51 ttggcaattg ggatttCaag acgcagcaac acctatgatg caaggaatga CD 101 ttgacttaca tcatgatatt tttttctttc tacccatcat tatgatcttt CD 151 gtattatgga tgttggttcg cgctttatgg catcttcact ataagagaaa CD 201 tccaattcca gaaaggattg ttcatggaac tactatagag attattcgga CD 251 ctatttttct tagtattatc tcgatgttta ttgctatacc atcttttgct CD 301 ttattatatt caatggacga ggtagtagat ccagctgtta ctatcaaagc CD 351 tattggacat Caatggtatt ggacttatga gtattcagac tataacagtt CD 401 ccgatgaaca gtcactaact tttgacagtt atatgattac ggaggatgag CD 451 ttagaattag gtgcattacg tttattagaa gtagacaata gagtgattgt CD 501 accagcgaaa actcatatcc gtctgattat cacatctgct gatgtacctt CD 551 atagttgggc tgtaccttcc tcaggtgtaa aatgcgatgc tgtacccggt CD 601 cgttcaaatc agacttccat ttttattaaa cgaaaaggag tttactatgg CD 651 tCaatgcagt gaaatttgtg gaaccaatca tgcgtttatg cctattgtcg CD 701 tagaagctgt ttctttggat gatcatgttt cttgggtatc taatgaatta CD 751 gactaa SQ SEQUENCE 252 AA; MKNTWLFPIA YRDAAEPWQL GFQDAATPMM QGMIDLHHDI FFFLPIIMIF VLWMLVRALW HLHYKRNPIP ERIVHGTTIE IIRTIFLSII SMFIAIPSFA LLYSMDEVVD PAVTIKAIGH QWYWTYEYSD YNSSDEQSLT FDSYMITEDE LELGALRLLE VDNRVIVPAK THIRLIITSA DVPYSWAVPS SGVKCDAVPG RSNQTSIFIK RKGVYYGQCS EICGTNHAFM PIVVEAVSLD DHVSWVSNEL D* // ID EU660574_43 STANDARD; PRT; 266 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : cox3 FT NOTE : FT LOCUS_TAG : MeaeMp54 FT PROTEIN_ID : ACC86811.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 169461 - 170258 FT DIRECTIONS : positive FT EDITING : 5 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 798 NT; CD 1 atgagtgttt ctTaaaagca tccttaccat ttagtagatc caagtccatg CD 51 gctaattttg ggttcattgg gagctttggc aagcaccgtt ggtggtgtta CD 101 tgtacatgca ttcctttacg ggaggtggaa cacttcttag tttaggctta CD 151 ggaatgatcc catataccat gattgtatgg cggcgcgacg tcatacgtga CD 201 atccacttac gaaggacatc atacatttat ggtccaatta ggacttcgtt CD 251 atggtatgat tttgtttatc gtgtctgaag tcacgttttt tttagctttc CD 301 ctttgggcct tccttcaccc tcctttggca cccacggtag agattggagc CD 351 tatttggtct cctaagggaa ttgatgtgtt agatccttgg ggaattcctt CD 401 ttttaaatac acctattcta ccttcatcgg gagccgccat aacttgggct CD 451 catcatgcta tattagcggg attgaaagaa gaagctgttt acgctttagt CD 501 agctactgtt tcgctggctt tagttttcac tgggcttcaa ggaatggaat CD 551 atgtagaagc acctttcacc atttctgatg gtatttatgg ttctaccttt CD 601 tttttagcta cgggttctca tggttttcat gctattgtgg gtaccatttt CD 651 cttaacaaca tgtggtattc gtgaatatct gggtcatttt actgaaaagc CD 701 atcacttcgg ctttgaagca gctgcttggc accggcattt cgtggatgtg CD 751 gttcggttat ttctgctcct acccattcat cggcggggag gtaattaa FT EDITED CDNA CD 1 atgagtgttt ctCaaaagca tccttaccat ttagtagatc caagtccatg CD 51 gctaattttg ggttcattgg gagctttggc aagcaccgtt ggtggtgtta CD 101 tgtacatgca ttcctttacg ggaggtggaa cacttcttag tttaggctta CD 151 ggaatgatcc catataccat gattgtatgg cggcgcgacg tcatacgtga CD 201 atccacttac gaaggacatc atacatttat ggtccaatta ggacttcgtt CD 251 atggtatgat tttgtttatc gtgtctgaag tcacgttttt tttagctttc CD 301 ctttgggcct tccttcaccc tcctttggca cccacggtag agattggagc CD 351 tatttggtct cctaagggaa ttgatgtgtt agatccttgg ggaattcctt CD 401 ttttaaatac acctattcta ccttcatcgg gagccgccat aacttgggct CD 451 catcatgcta tattagcggg attgaaagaa gaagctgttt acgctttagt CD 501 agctactgtt tcgctggctt tagttttcac tgggcttcaa ggaatggaat CD 551 atgtagaagc acctttcacc atttctgatg gtatttatgg ttctaccttt CD 601 tttttagcta cgggttctca tggttttcat gctattgtgg gtaccatttt CD 651 cttaacaaca tgtggtattc gtgaatatct gggtcatttt actgaaaagc CD 701 atcacttcgg ctttgaagca gctgcttggc accggcattt cgtggatgtg CD 751 gttcggttat ttctgctcct acccattcat cggcggggag gtaattaa SQ SEQUENCE 266 AA; MSVSQKHPYH LVDPSPWLIL GSLGALASTV GGVMYMHSFT GGGTLLSLGL GMIPYTMIVW RRDVIRESTY EGHHTFMVQL GLRYGMILFI VSEVTFFLAF LWAFLHPPLA PTVEIGAIWS PKGIDVLDPW GIPFLNTPIL PSSGAAITWA HHAILAGLKE EAVYALVATV SLALVFTGLQ GMEYVEAPFT ISDGIYGSTF FLATGSHGFH AIVGTIFLTT CGIREYLGHF TEKHHFGFEA AAWHRHFVDV VRLFLLLPIH RRGGN* // ID EU660574_44 STANDARD; PRT; 407 AA. AC EU660574; DT Tue Jul 21 07:06:06 2009 DE Megaceros aenigmaticus mitochondrion, complete genome. OS mitochondrion Megaceros aenigmaticus OC Megaceros aenigmaticus RN [1] RL Unpublished FT Full length CDS FT GENE : cob FT NOTE : FT LOCUS_TAG : MeaeMp55 FT PROTEIN_ID : ACC86812.1 FT PROTEIN_NAME : apocytochrome b FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 263/1 FT INTRON 280/1 FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 46 *(Tag) -> Q(Cag) FT EDITING : 322 *(Tga) -> R(Cga) FT EDITING : 345 *(Taa) -> Q(Caa) FT CODON_START : 1 CL CDNALEN 1221 NT; CD 1 aCggcaagac gactttcgat tcttaaacaa cctatatttt ctacagttaa CD 51 caatcattcg atagactatc caactctaag caatttaagt tattggtggg CD 101 gttttggttc gttggctgct attcgtttgg ttactTagat aattacaggt CD 151 gtttccttag ctatgcatca tacacctcat gtggatctag ctttcttaag CD 201 tgtagaacac ataatgagag atgtgaaagg aggctggtta cttcgttaca CD 251 tgcatgctaa tggtgccagt atgttcttta ttacggttta tcttcatatt CD 301 cttcgtggtt tatattatgg aagttatgcg agtcctaggg aattagtttg CD 351 gtgtctcgga gtggtcattt tattattaat gattataaca gcttttatag CD 401 gctacgtact acctcggggt caaatgagct tttggggagc aacggtaatt CD 451 acaagcttag ctagcgccat acctgtagta ggagacacta tagtaactcg CD 501 gctttggggt ggctttcccg tagacaatgc taccttaaat cgtttttcta CD 551 gccttcacca cttacctcct tttctcattg caggtgttag tattcttcat CD 601 ccggctgcat tacatcagta tggttccaat aatccattgg gtatcaattc CD 651 ttctgtagat aaaatagctt cgtatctcta ttcttacgta aaagatccag CD 701 tgggtcgggt agcatttgcc atctttttct ctatttttgt ttcttacgca CD 751 cctaatgtct tggggcatcc cgacaactat atacccgcaa atccgatgtc CD 801 aaccccggct catattgtgc cagaatggta tttcttacca gtctatgcta CD 851 ttcttcgaag tatacctaac aaattagggg gtgtagctgc cataggacca CD 901 gtttccgtgt cattatttgc tctacctttt attaacacat catatgtacg CD 951 tagttcaagt ttcTgaccga ttcaccaaaa aatgttttgg ttgcccttgg CD 1001 cagattgcct acttttaggt tggattggat gtTaacctgt ggaggcacca CD 1051 tatgttacta ttggccaaat tgcttcggtt gcttctttct tatactttgt CD 1101 tattacgcct attcttggca aattagaaga cagattaatc aatacttcaa CD 1151 gcggggaagg taagcttccc tgcttcttcg tcaccaccag tattatgtat CD 1201 gcgatttcgt ccctcggttg a FT EDITED CDNA CD 1 aTggcaagac gactttcgat tcttaaacaa cctatatttt ctacagttaa CD 51 caatcattcg atagactatc caactctaag caatttaagt tattggtggg CD 101 gttttggttc gttggctgct attcgtttgg ttactCagat aattacaggt CD 151 gtttccttag ctatgcatca tacacctcat gtggatctag ctttcttaag CD 201 tgtagaacac ataatgagag atgtgaaagg aggctggtta cttcgttaca CD 251 tgcatgctaa tggtgccagt atgttcttta ttacggttta tcttcatatt CD 301 cttcgtggtt tatattatgg aagttatgcg agtcctaggg aattagtttg CD 351 gtgtctcgga gtggtcattt tattattaat gattataaca gcttttatag CD 401 gctacgtact acctcggggt caaatgagct tttggggagc aacggtaatt CD 451 acaagcttag ctagcgccat acctgtagta ggagacacta tagtaactcg CD 501 gctttggggt ggctttcccg tagacaatgc taccttaaat cgtttttcta CD 551 gccttcacca cttacctcct tttctcattg caggtgttag tattcttcat CD 601 ccggctgcat tacatcagta tggttccaat aatccattgg gtatcaattc CD 651 ttctgtagat aaaatagctt cgtatctcta ttcttacgta aaagatccag CD 701 tgggtcgggt agcatttgcc atctttttct ctatttttgt ttcttacgca CD 751 cctaatgtct tggggcatcc cgacaactat atacccgcaa atccgatgtc CD 801 aaccccggct catattgtgc cagaatggta tttcttacca gtctatgcta CD 851 ttcttcgaag tatacctaac aaattagggg gtgtagctgc cataggacca CD 901 gtttccgtgt cattatttgc tctacctttt attaacacat catatgtacg CD 951 tagttcaagt ttcCgaccga ttcaccaaaa aatgttttgg ttgcccttgg CD 1001 cagattgcct acttttaggt tggattggat gtCaacctgt ggaggcacca CD 1051 tatgttacta ttggccaaat tgcttcggtt gcttctttct tatactttgt CD 1101 tattacgcct attcttggca aattagaaga cagattaatc aatacttcaa CD 1151 gcggggaagg taagcttccc tgcttcttcg tcaccaccag tattatgtat CD 1201 gcgatttcgt ccctcggttg a SQ SEQUENCE 407 AA; MARRLSILKQ PIFSTVNNHS IDYPTLSNLS YWWGFGSLAA IRLVTQIITG VSLAMHHTPH VDLAFLSVEH IMRDVKGGWL LRYMHANGAS MFFITVYLHI LRGLYYGSYA SPRELVWCLG VVILLLMIIT AFIGYVLPRG QMSFWGATVI TSLASAIPVV GDTIVTRLWG GFPVDNATLN RFSSLHHLPP FLIAGVSILH PAALHQYGSN NPLGINSSVD KIASYLYSYV KDPVGRVAFA IFFSIFVSYA PNVLGHPDNY IPANPMSTPA HIVPEWYFLP VYAILRSIPN KLGGVAAIGP VSVSLFALPF INTSYVRSSS FRPIHQKMFW LPLADCLLLG WIGCQPVEAP YVTIGQIASV ASFLYFVITP ILGKLEDRLI NTSSGEGKLP CFFVTTSIMY AISSLG* // ID EU999002_1 STANDARD; PRT; 673 AA. AC EU999002; DT Tue Jul 21 07:06:16 2009 DE Arabidopsis thaliana MatR mRNA, partial cds; mitochondrial. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Mitochondrion 8 (4), 319-327 (2008) RL PUBMED 18678284 FT N-terminal not determined FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ACH78244.1 FT PROTEIN_NAME : MatR FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 2019 FT DIRECTIONS : positive FT EDITING : 125 P(cCa) -> L(cTa) FT EDITING : 577 S(tCC) -> F(tTT) FT EDITING : 584 P(cCt) -> L(cTt) FT EDITING : 591 R(Cgc) -> C(Tgc) FT EDITING : 603 H(Cac) -> Y(Tac) FT EDITING : 632 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 2019 NT; CD 1 gggttgaagt ttagaccgct cacagtagtt ctacctatag aaaagatcat CD 51 gaaagaggcg atcagaatgg tactcgaatc catttacgat cccgagtttc CD 101 cagacacatc gcatttccgc tcgggtcaag gctgccactc ggtcctaaga CD 151 cggatcaaag aagagtgggg aatctctcgc tggtttttag aattcgacat CD 201 caggaagtgt tttcacacca tcgaccgaca tcgactcatc caaattttga CD 251 aggaagagat cgacgatccc aagttctttt actccattca gaaagtattt CD 301 tccgccggac gactcgtagg agttgagagg ggcccttact ccgtcccaca CD 351 cagtgtacta ctatcggccc tacCaggcaa catctaccta cacaagctcg CD 401 atcaggagat agggaggatc cgacagaagt acgaaattcc gattgttcag CD 451 agagtcagat cggttctatt aaggacaggt cgtcgtattg atgaccaaga CD 501 aaaccctgga gaagaagcaa gcttcaacgc tccccaagac aacagagcca CD 551 tcattgtggg gagcgttaag agcatgcaac gcaaagcggc ctttcattcc CD 601 cttgtttcgt cgtggcacac cccccccaca agcaccctcc ggctcagggg CD 651 ggaccagaaa aggcctttcg ttttcccccc ttcgtcggcc cttgccgtct CD 701 tccttaacaa gccctcgagc cttctttgcg ccgccttcct catagaagcc CD 751 gccgggttga ccccgaaggc tgaattctat ggtggagaac gctgtaataa CD 801 taattgggcc atgagagacc ttcttaagta ttgcaaaaga aagggcctgc CD 851 tgatagagct gggcggggag gcgatactag ttatcaggtc agagagaggc CD 901 ctggcccgta agcaggcccc cttaaaaacc cattacttaa taaggatttg CD 951 ttacgcgcga tatgccgacg acttactact gggaatcgtg ggtgccgtag CD 1001 agcttctcat agaaatacaa aaacgtatcg cccatttcct acaatctggc CD 1051 ctgaaccttt gggtaggctc cgcaggatca acaacaatag ctgcacggag CD 1101 tacggtagaa ttccttggta cggtcattcg ggaagtccct ccgaggacga CD 1151 ctcccataca atttttgcga gagctggaaa agcgtctacg ggtaaagcac CD 1201 cgtatccata taactgcttg ccacctacgc tccgccatcc attcaaagtt CD 1251 taggaaccta ggtgatagta tcccgatcaa acagctgacg aaggggatga CD 1301 gcaaaacagg gagtctacag gacggggttc aactagcgga gactcttgga CD 1351 acagctggag tcagaagtcc ccaagttagc gtattatggg ggaccgtcaa CD 1401 gcacatccgg caaggatcaa gggggatctc gttcttgcat agctcaggtc CD 1451 ggagcaacgc gtcatcggac gttcaacagg tagtctcacg atcgggcact CD 1501 catgcccgta agttgtcatt gtatactccc ccgggtcgga aggcggcggg CD 1551 ggagggagga ggacactggg cgggatctat cagcagcgaa ttccccataa CD 1601 agatagaggc acctataaaa aagatactcc gaaggcttcg ggatcgaggt CD 1651 atcattagcc gaagaagacc ctggccaatc cacgtggcct gtttgacgaa CD 1701 cgtcagcgac gaagacatcg taaattggtC Cgcgggcatc gcgataagtc CD 1751 Ctctgtccta ctacaggtgc Cgcgacaacc tttatcaagt ccgaacgatt CD 1801 gtcgacCacc agattcgctg gtctgcaata ttcaccctag cccacaagca CD 1851 caaatcctcg gcgccgaata taatcctcaa gtactccaaa gactCaaata CD 1901 ttgtaaatca agaaggtggc aagatccttg cagagttccc caacagcata CD 1951 gagcttggga agctcggacc cggtcaagac ctgaacaaga aggaacactc CD 2001 aactactagt ctagtctag FT EDITED CDNA CD 1 gggttgaagt ttagaccgct cacagtagtt ctacctatag aaaagatcat CD 51 gaaagaggcg atcagaatgg tactcgaatc catttacgat cccgagtttc CD 101 cagacacatc gcatttccgc tcgggtcaag gctgccactc ggtcctaaga CD 151 cggatcaaag aagagtgggg aatctctcgc tggtttttag aattcgacat CD 201 caggaagtgt tttcacacca tcgaccgaca tcgactcatc caaattttga CD 251 aggaagagat cgacgatccc aagttctttt actccattca gaaagtattt CD 301 tccgccggac gactcgtagg agttgagagg ggcccttact ccgtcccaca CD 351 cagtgtacta ctatcggccc tacTaggcaa catctaccta cacaagctcg CD 401 atcaggagat agggaggatc cgacagaagt acgaaattcc gattgttcag CD 451 agagtcagat cggttctatt aaggacaggt cgtcgtattg atgaccaaga CD 501 aaaccctgga gaagaagcaa gcttcaacgc tccccaagac aacagagcca CD 551 tcattgtggg gagcgttaag agcatgcaac gcaaagcggc ctttcattcc CD 601 cttgtttcgt cgtggcacac cccccccaca agcaccctcc ggctcagggg CD 651 ggaccagaaa aggcctttcg ttttcccccc ttcgtcggcc cttgccgtct CD 701 tccttaacaa gccctcgagc cttctttgcg ccgccttcct catagaagcc CD 751 gccgggttga ccccgaaggc tgaattctat ggtggagaac gctgtaataa CD 801 taattgggcc atgagagacc ttcttaagta ttgcaaaaga aagggcctgc CD 851 tgatagagct gggcggggag gcgatactag ttatcaggtc agagagaggc CD 901 ctggcccgta agcaggcccc cttaaaaacc cattacttaa taaggatttg CD 951 ttacgcgcga tatgccgacg acttactact gggaatcgtg ggtgccgtag CD 1001 agcttctcat agaaatacaa aaacgtatcg cccatttcct acaatctggc CD 1051 ctgaaccttt gggtaggctc cgcaggatca acaacaatag ctgcacggag CD 1101 tacggtagaa ttccttggta cggtcattcg ggaagtccct ccgaggacga CD 1151 ctcccataca atttttgcga gagctggaaa agcgtctacg ggtaaagcac CD 1201 cgtatccata taactgcttg ccacctacgc tccgccatcc attcaaagtt CD 1251 taggaaccta ggtgatagta tcccgatcaa acagctgacg aaggggatga CD 1301 gcaaaacagg gagtctacag gacggggttc aactagcgga gactcttgga CD 1351 acagctggag tcagaagtcc ccaagttagc gtattatggg ggaccgtcaa CD 1401 gcacatccgg caaggatcaa gggggatctc gttcttgcat agctcaggtc CD 1451 ggagcaacgc gtcatcggac gttcaacagg tagtctcacg atcgggcact CD 1501 catgcccgta agttgtcatt gtatactccc ccgggtcgga aggcggcggg CD 1551 ggagggagga ggacactggg cgggatctat cagcagcgaa ttccccataa CD 1601 agatagaggc acctataaaa aagatactcc gaaggcttcg ggatcgaggt CD 1651 atcattagcc gaagaagacc ctggccaatc cacgtggcct gtttgacgaa CD 1701 cgtcagcgac gaagacatcg taaattggtT Tgcgggcatc gcgataagtc CD 1751 Ttctgtccta ctacaggtgc Tgcgacaacc tttatcaagt ccgaacgatt CD 1801 gtcgacTacc agattcgctg gtctgcaata ttcaccctag cccacaagca CD 1851 caaatcctcg gcgccgaata taatcctcaa gtactccaaa gactTaaata CD 1901 ttgtaaatca agaaggtggc aagatccttg cagagttccc caacagcata CD 1951 gagcttggga agctcggacc cggtcaagac ctgaacaaga aggaacactc CD 2001 aactactagt ctagtctag SQ SEQUENCE 673 AA; GLKFRPLTVV LPIEKIMKEA IRMVLESIYD PEFPDTSHFR SGQGCHSVLR RIKEEWGISR WFLEFDIRKC FHTIDRHRLI QILKEEIDDP KFFYSIQKVF SAGRLVGVER GPYSVPHSVL LSALLGNIYL HKLDQEIGRI RQKYEIPIVQ RVRSVLLRTG RRIDDQENPG EEASFNAPQD NRAIIVGSVK SMQRKAAFHS LVSSWHTPPT STLRLRGDQK RPFVFPPSSA LAVFLNKPSS LLCAAFLIEA AGLTPKAEFY GGERCNNNWA MRDLLKYCKR KGLLIELGGE AILVIRSERG LARKQAPLKT HYLIRICYAR YADDLLLGIV GAVELLIEIQ KRIAHFLQSG LNLWVGSAGS TTIAARSTVE FLGTVIREVP PRTTPIQFLR ELEKRLRVKH RIHITACHLR SAIHSKFRNL GDSIPIKQLT KGMSKTGSLQ DGVQLAETLG TAGVRSPQVS VLWGTVKHIR QGSRGISFLH SSGRSNASSD VQQVVSRSGT HARKLSLYTP PGRKAAGEGG GHWAGSISSE FPIKIEAPIK KILRRLRDRG IISRRRPWPI HVACLTNVSD EDIVNWFAGI AISLLSYYRC CDNLYQVRTI VDYQIRWSAI FTLAHKHKSS APNIILKYSK DLNIVNQEGG KILAEFPNSI ELGKLGPGQD LNKKEHSTTS LV* // ID EU999003_1 STANDARD; PRT; 326 AA. AC EU999003; DT Tue Jul 21 07:06:16 2009 DE Arabidopsis thaliana NADH dehydrogenase subunit 1 mRNA, complete OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Mitochondrion 8 (4), 319-327 (2008) RL PUBMED 18678284 FT Full length CDS FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ACH78245.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 978 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 56 S(tCg) -> L(tTg) FT EDITING : 89 R(Cgg) -> W(Tgg) FT EDITING : 103 P(CCg) -> L(TTg) FT EDITING : 164 P(CcC) -> S(TcT) FT EDITING : 165 R(Cgt) -> C(Tgt) FT EDITING : 167 S(tCg) -> L(tTg) FT EDITING : 179 S(tCt) -> F(tTt) FT EDITING : 191 L(Ctt) -> F(Ttt) FT EDITING : 194 R(Cgt) -> C(Tgt) FT EDITING : 212 S(tCa) -> L(tTa) FT EDITING : 225 S(tCt) -> F(tTt) FT EDITING : 242 P(cCa) -> L(cTa) FT EDITING : 248 P(cCa) -> L(cTa) FT EDITING : 252 P(cCg) -> L(cTg) FT EDITING : 275 L(Ctc) -> F(Ttc) FT EDITING : 300 R(Cgg) -> W(Tgg) FT EDITING : 313 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 978 NT; CD 1 aCgtacatag ctgttccagc tgaaatactt ggaataattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtag aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttCgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat tttttccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgctCgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatCCga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga attattatag cgggtcggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtctctta tgaagtatct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtC cCCgtaattC CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtCtggt attcccctgt CD 551 tccctgtatt ggttatgttc CttatttctC gtctagcaga aactaatcga CD 601 gctccgtttg atctcccaga agcggaagct gaatCagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtCtgctct tttttttttg ggagagtatg CD 701 ccaatatgat cttaatgagt ggtcCatgca cattgttctt tcCaggaggt CD 751 tggcCgccta tcctagatct tcccattttc aagaagatcc cgggctcgat CD 801 ctggtttagt atcaaggttc ttCtctttct gttcctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggcCgg CD 901 aaagtgttct tgcctctatc attagcttgg gtagtcCctg tttctggtct CD 951 tttagtcacc tttcaatggc ttccttaa FT EDITED CDNA CD 1 aTgtacatag ctgttccagc tgaaatactt ggaataattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtag aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttTgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat tttttccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgctTgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatTTga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga attattatag cgggtcggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtctctta tgaagtatct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtT cTTgtaattT CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtTtggt attcccctgt CD 551 tccctgtatt ggttatgttc TttatttctT gtctagcaga aactaatcga CD 601 gctccgtttg atctcccaga agcggaagct gaatTagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtTtgctct tttttttttg ggagagtatg CD 701 ccaatatgat cttaatgagt ggtcTatgca cattgttctt tcTaggaggt CD 751 tggcTgccta tcctagatct tcccattttc aagaagatcc cgggctcgat CD 801 ctggtttagt atcaaggttc ttTtctttct gttcctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggcTgg CD 901 aaagtgttct tgcctctatc attagcttgg gtagtcTctg tttctggtct CD 951 tttagtcacc tttcaatggc ttccttaa SQ SEQUENCE 326 AA; MYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGLKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVAWA VVPFDYGMVL SDLNIGLLYL FAISSLGVYG IIIAGRSSNS KYAFLGALRS AAQMVSYEVS IGLILITVLI CVGSCNLSEI VMAQKQIWFG IPLFPVLVMF FISCLAETNR APFDLPEAEA ELVAGYNVEY SSMGFALFFL GEYANMILMS GLCTLFFLGG WLPILDLPIF KKIPGSIWFS IKVLFFLFLY IWVRAAFPRY RYDQLMGLGW KVFLPLSLAW VVSVSGLLVT FQWLP* // ID EU999004_1 STANDARD; PRT; 496 AA. AC EU999004; DT Tue Jul 21 07:06:16 2009 DE Arabidopsis thaliana NADH dehydrogenase subunit 4 mRNA, complete OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Mitochondrion 8 (4), 319-327 (2008) RL PUBMED 18678284 FT Full length CDS FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ACH78246.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 1488 FT DIRECTIONS : positive FT EDITING : 10 S(tCt) -> F(tTt) FT EDITING : 25 T(aCt) -> I(aTt) FT EDITING : 28 F(ttC) -> F(ttT) FT EDITING : 36 P(cCg) -> L(cTg) FT EDITING : 42 L(Ctg) -> L(Ttg) FT EDITING : 53 P(cCt) -> L(cTt) FT EDITING : 55 P(cCt) -> L(cTt) FT EDITING : 56 R(Cgg) -> W(Tgg) FT EDITING : 66 S(tCt) -> F(tTt) FT EDITING : 106 S(tCa) -> L(tTa) FT EDITING : 121 T(aCa) -> I(aTa) FT EDITING : 126 R(Cgt) -> C(Tgt) FT EDITING : 135 R(Cgc) -> C(Tgc) FT EDITING : 146 P(CCc) -> F(TTc) FT EDITING : 150 P(cCa) -> L(cTa) FT EDITING : 203 S(tCa) -> L(tTa) FT EDITING : 220 S(tCt) -> F(tTt) FT EDITING : 256 P(cCt) -> L(cTt) FT EDITING : 262 H(Cac) -> Y(Tac) FT EDITING : 279 S(tCt) -> F(tTt) FT EDITING : 299 S(tCa) -> L(tTa) FT EDITING : 337 P(cCg) -> L(cTg) FT EDITING : 345 P(Cct) -> S(Tct) FT EDITING : 377 L(Ctc) -> F(Ttc) FT EDITING : 383 S(tCt) -> F(tTt) FT EDITING : 391 S(tCa) -> L(tTa) FT EDITING : 452 S(tCa) -> L(tTa) FT EDITING : 458 S(tCc) -> F(tTc) FT EDITING : 469 R(Cgg) -> W(Tgg) FT EDITING : 473 H(Cac) -> Y(Tac) FT EDITING : 478 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 1488 NT; CD 1 atgttagaac atttctgtga atgctattCt aatctaagtg gtcttattct CD 51 gtgtcctgtg ctaggaagca ttaCtcttct tttCattcca aattcaagaa CD 101 tacgacCgat acgattaatt ggtCtgtgtg cctctcttat tacttttttg CD 151 tattctcCtg ttcCtCggat acaattcgac tcttctacgg ccaaatCtca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc aatttttatt CD 251 tgggtataga cggtatctct ttattcttcg tgatattgac cacatttctg CD 301 atccctattt gcatttCagt gggttggtct ggtatgagaa gttatgggaa CD 351 agagtatatt aCagcatttt taattCgtga atttctaatg atcgccgtgt CD 401 tcCgcatgct agatcttcta ctattctatg tttttCCcga aagcgtgcCa CD 451 atccctatgt tcattattat aggagtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctttatac tttacttgga tctcttttta CD 551 tgctattagc tattctgttg attcttttcc aaacaggaac caccgattta CD 601 caaatatCat taaccacaga atttagtgag cggcgccaaa tctttctatg CD 651 gattgcttCt ttcgcctctt tcgccgtcaa agtgcctatg gtaccagttc CD 701 atatttggtt acctgaagct catgtagagg cacctacggc aggatccgtc CD 751 atcttggcag gaattcCttt aaaatttgga accCacgggt ttttaagatt CD 801 ttcaataccc atgtttcccg aagcgacact ttgttCtact cctttcattt CD 851 atactttaag cgcgattgct ataatatata cttccttgac cacttCaaga CD 901 cagatcgatc taaagaagat cattgcttac tcctcagtag cccatatgaa CD 951 tctggtgact attggtatgt ttagtccgaa catacaggga attggaggta CD 1001 gcattctacC gatgttaagt catggactgg ttCcttcagc cctttttcta CD 1051 tgtgttggtg ttttatatga ccgacataag actcgacttg ttagatatta CD 1101 tggaggttta gtgagcacca tgccgaatCt ctctaccatt ttcttttCtt CD 1151 ttactttggc caatatgagt tCacctggta ctagcagctt tatcggggaa CD 1201 tttctcatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 agcagcgctt gggatgattt taggtgcggc ctattccctt tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacctg atttcctcca taaattctcc CD 1351 gattCaaatg gcagagaagt ttCcatattt ataccttttc ttgttggact CD 1401 cgttCggatg ggtgttCacc ccaaagtgtt ccCggactgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggcaaat ttcattga FT EDITED CDNA CD 1 atgttagaac atttctgtga atgctattTt aatctaagtg gtcttattct CD 51 gtgtcctgtg ctaggaagca ttaTtcttct tttTattcca aattcaagaa CD 101 tacgacTgat acgattaatt ggtTtgtgtg cctctcttat tacttttttg CD 151 tattctcTtg ttcTtTggat acaattcgac tcttctacgg ccaaatTtca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc aatttttatt CD 251 tgggtataga cggtatctct ttattcttcg tgatattgac cacatttctg CD 301 atccctattt gcatttTagt gggttggtct ggtatgagaa gttatgggaa CD 351 agagtatatt aTagcatttt taattTgtga atttctaatg atcgccgtgt CD 401 tcTgcatgct agatcttcta ctattctatg tttttTTcga aagcgtgcTa CD 451 atccctatgt tcattattat aggagtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctttatac tttacttgga tctcttttta CD 551 tgctattagc tattctgttg attcttttcc aaacaggaac caccgattta CD 601 caaatatTat taaccacaga atttagtgag cggcgccaaa tctttctatg CD 651 gattgcttTt ttcgcctctt tcgccgtcaa agtgcctatg gtaccagttc CD 701 atatttggtt acctgaagct catgtagagg cacctacggc aggatccgtc CD 751 atcttggcag gaattcTttt aaaatttgga accTacgggt ttttaagatt CD 801 ttcaataccc atgtttcccg aagcgacact ttgttTtact cctttcattt CD 851 atactttaag cgcgattgct ataatatata cttccttgac cacttTaaga CD 901 cagatcgatc taaagaagat cattgcttac tcctcagtag cccatatgaa CD 951 tctggtgact attggtatgt ttagtccgaa catacaggga attggaggta CD 1001 gcattctacT gatgttaagt catggactgg ttTcttcagc cctttttcta CD 1051 tgtgttggtg ttttatatga ccgacataag actcgacttg ttagatatta CD 1101 tggaggttta gtgagcacca tgccgaatTt ctctaccatt ttcttttTtt CD 1151 ttactttggc caatatgagt tTacctggta ctagcagctt tatcggggaa CD 1201 tttctcatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 agcagcgctt gggatgattt taggtgcggc ctattccctt tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacctg atttcctcca taaattctcc CD 1351 gattTaaatg gcagagaagt ttTcatattt ataccttttc ttgttggact CD 1401 cgttTggatg ggtgttTacc ccaaagtgtt ccTggactgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggcaaat ttcattga SQ SEQUENCE 496 AA; MLEHFCECYF NLSGLILCPV LGSIILLFIP NSRIRLIRLI GLCASLITFL YSLVLWIQFD SSTAKFQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL IPICILVGWS GMRSYGKEYI IAFLICEFLM IAVFCMLDLL LFYVFFESVL IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL QILLTTEFSE RRQIFLWIAF FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGILLKFG TYGFLRFSIP MFPEATLCFT PFIYTLSAIA IIYTSLTTLR QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILLMLS HGLVSSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNFSTI FFFFTLANMS LPGTSSFIGE FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DLNGREVFIF IPFLVGLVWM GVYPKVFLDC MHTSVSNLVQ HGKFH* // ID EU999005_1 STANDARD; PRT; 670 AA. AC EU999005; DT Tue Jul 21 07:06:16 2009 DE Arabidopsis thaliana NADH dehydrogenase subunit 5 mRNA, complete OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Mitochondrion 8 (4), 319-327 (2008) RL PUBMED 18678284 FT Full length CDS FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ACH78247.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 5 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 2010 FT DIRECTIONS : positive FT EDITING : 52 P(cCg) -> L(cTg) FT EDITING : 81 P(cCg) -> L(cTg) FT EDITING : 120 L(Ctt) -> F(Ttt) FT EDITING : 125 P(cCa) -> L(cTa) FT EDITING : 133 S(tCt) -> F(tTt) FT EDITING : 165 T(aCa) -> I(aTa) FT EDITING : 183 S(tCg) -> L(tTg) FT EDITING : 185 R(Cgt) -> C(Tgt) FT EDITING : 200 R(Cgt) -> C(Tgt) FT EDITING : 203 A(gCC) -> V(gTT) FT EDITING : 210 S(tCt) -> F(tTt) FT EDITING : 226 L(Ctt) -> F(Ttt) FT EDITING : 238 S(tCg) -> L(tTg) FT EDITING : 242 S(tCa) -> L(tTa) FT EDITING : 255 S(tCg) -> L(tTg) FT EDITING : 279 P(Cca) -> S(Tca) FT EDITING : 288 S(tCt) -> F(tTt) FT EDITING : 292 T(aCg) -> M(aTg) FT EDITING : 425 V(gtC) -> V(gtT) FT EDITING : 497 P(cCc) -> L(cTc) FT EDITING : 517 T(aCc) -> I(aTc) FT EDITING : 527 S(tCa) -> L(tTa) FT EDITING : 537 P(cCc) -> L(cTc) FT EDITING : 632 S(tCa) -> L(tTa) FT EDITING : 639 S(tCt) -> F(tTt) FT EDITING : 640 R(Cgt) -> C(Tgt) FT EDITING : 653 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 2010 NT; CD 1 atgtatctac ttatcgtatt tttgcccctg ctcggtagtt ccgtagcagg CD 51 ttttttcgga cgttttctag gatcagaagg aagcgctata atgaccacta CD 101 cgtgcgtttc attctcttcg atcttatctt tgattgcttt ttatgaagtc CD 151 gcacCgggag ctagtgcttg ctatctaaga attgctccat ggatctcatc CD 201 ggaaatgttt gatgcttctt ggggcttctt gttcgatagc cCgaccgtag CD 251 tgatgttaat tgtggttaca tccataagta gcttggtcca tctttattcc CD 301 atttcatata tgtccgagga tccgcatagc cctcgattta tgtgttattt CD 351 atccattCtt acttttttta tgcCaatgtt ggtgactgga gataactCtc CD 401 ttcaattatt cctgggatgg gagggagtag gtcttgcttc atatttgtta CD 451 attcattttt ggtttacacg acttcaggca gataaagcag ctaCaaaagc CD 501 tatgcttgtc aatcgagtag gtgattttgg attagctctt gggatttCgg CD 551 gtCgttttac tctctttcaa acagtagact tttcaaccat ttttgctCgt CD 601 gctagtgCCc ccagaaattc ttggatttCt tgcaatatga gattgaatgc CD 651 cataagtctt atttgtattt tacttCttat tggtgctgtt gggaaatccg CD 701 cgcagatagg atCgcatact tggtCacccg atgctatgga gggtcccact CD 751 ccagtatccg cttCgattca tgcagctact atggtaacag ctggcgtttt CD 801 catgatagca aggtgctccc ctttatttga atacCcacct acggctttga CD 851 ttgttattac ttCtgcagga gctaCgacgt cattccttgc ggcaaccact CD 901 ggaatattac agaacgatct aaagagggtc atcgcttatt caacttgtag CD 951 tcaattaggc tatatgatct ttgcttgcgg catctctaac tattcggtta CD 1001 gcgtctttca cttaatgaat cacgcctttt tcaaagcatt actattcctg CD 1051 agtgctggtt cggtgattca tgccatgtcg gatgagcaag atatgcggaa CD 1101 gatggggggg cttgcctcct ccttcccttt gacctatgcc atgatgctca CD 1151 taggcagctt atctctaatt ggatttcctt ttctaactgg attttattcc CD 1201 aaagatgtga tcttagagct cgcttacact aagtatacca tcagtgggaa CD 1251 ctttgctttc tggttgggaa gtgtCtctgt ccttttcact tcttattact CD 1301 cttttcgttt actttttcta acatttctag taccaactaa ttcgttcggg CD 1351 cgagacatct cacgatgtca tgatgcgccc attcctatgg ccattccttt CD 1401 aatacttctg gctctcggga gtctctttgt aggatacttg gccaaagata CD 1451 tgatgattgg tttaggtacc aatttttggg ccaattcccC cctcgtacta CD 1501 ccaaaaaatg agattcttgc cgaatccgag tttgctgctc caaccattaC CD 1551 caaactaata cctattctgt ttagtacttC aggtgctttt gttgcgtata CD 1601 atgtaaatcC cgtagcggat caattccaac gagcctttca aactagtact CD 1651 ttttgtaatc gactctatag cttcttcaat aaacgctggt tcttcgatca CD 1701 agttttgaat gactttctag tcagatcgtt cctgcgtttc ggatatgaag CD 1751 tctcattcga agctttagac aaaggtgcta ttgagatatt gggcccttat CD 1801 ggtatctcgt acacattccg acgattggcc gagcgaataa gtcaacttca CD 1851 aagtggattt gtttatcatt atgcctttgc aatgttactt ggttCaactc CD 1901 tatttgtgac cttttCtCgt atgtgggact ctctatcttc ttgggtagat CD 1951 aatcgatCgt ctttcatttt gatagtgagt agtttttata caaagtcaag CD 2001 tcaagaataa FT EDITED CDNA CD 1 atgtatctac ttatcgtatt tttgcccctg ctcggtagtt ccgtagcagg CD 51 ttttttcgga cgttttctag gatcagaagg aagcgctata atgaccacta CD 101 cgtgcgtttc attctcttcg atcttatctt tgattgcttt ttatgaagtc CD 151 gcacTgggag ctagtgcttg ctatctaaga attgctccat ggatctcatc CD 201 ggaaatgttt gatgcttctt ggggcttctt gttcgatagc cTgaccgtag CD 251 tgatgttaat tgtggttaca tccataagta gcttggtcca tctttattcc CD 301 atttcatata tgtccgagga tccgcatagc cctcgattta tgtgttattt CD 351 atccattTtt acttttttta tgcTaatgtt ggtgactgga gataactTtc CD 401 ttcaattatt cctgggatgg gagggagtag gtcttgcttc atatttgtta CD 451 attcattttt ggtttacacg acttcaggca gataaagcag ctaTaaaagc CD 501 tatgcttgtc aatcgagtag gtgattttgg attagctctt gggatttTgg CD 551 gtTgttttac tctctttcaa acagtagact tttcaaccat ttttgctTgt CD 601 gctagtgTTc ccagaaattc ttggatttTt tgcaatatga gattgaatgc CD 651 cataagtctt atttgtattt tacttTttat tggtgctgtt gggaaatccg CD 701 cgcagatagg atTgcatact tggtTacccg atgctatgga gggtcccact CD 751 ccagtatccg cttTgattca tgcagctact atggtaacag ctggcgtttt CD 801 catgatagca aggtgctccc ctttatttga atacTcacct acggctttga CD 851 ttgttattac ttTtgcagga gctaTgacgt cattccttgc ggcaaccact CD 901 ggaatattac agaacgatct aaagagggtc atcgcttatt caacttgtag CD 951 tcaattaggc tatatgatct ttgcttgcgg catctctaac tattcggtta CD 1001 gcgtctttca cttaatgaat cacgcctttt tcaaagcatt actattcctg CD 1051 agtgctggtt cggtgattca tgccatgtcg gatgagcaag atatgcggaa CD 1101 gatggggggg cttgcctcct ccttcccttt gacctatgcc atgatgctca CD 1151 taggcagctt atctctaatt ggatttcctt ttctaactgg attttattcc CD 1201 aaagatgtga tcttagagct cgcttacact aagtatacca tcagtgggaa CD 1251 ctttgctttc tggttgggaa gtgtTtctgt ccttttcact tcttattact CD 1301 cttttcgttt actttttcta acatttctag taccaactaa ttcgttcggg CD 1351 cgagacatct cacgatgtca tgatgcgccc attcctatgg ccattccttt CD 1401 aatacttctg gctctcggga gtctctttgt aggatacttg gccaaagata CD 1451 tgatgattgg tttaggtacc aatttttggg ccaattcccT cctcgtacta CD 1501 ccaaaaaatg agattcttgc cgaatccgag tttgctgctc caaccattaT CD 1551 caaactaata cctattctgt ttagtacttT aggtgctttt gttgcgtata CD 1601 atgtaaatcT cgtagcggat caattccaac gagcctttca aactagtact CD 1651 ttttgtaatc gactctatag cttcttcaat aaacgctggt tcttcgatca CD 1701 agttttgaat gactttctag tcagatcgtt cctgcgtttc ggatatgaag CD 1751 tctcattcga agctttagac aaaggtgcta ttgagatatt gggcccttat CD 1801 ggtatctcgt acacattccg acgattggcc gagcgaataa gtcaacttca CD 1851 aagtggattt gtttatcatt atgcctttgc aatgttactt ggttTaactc CD 1901 tatttgtgac cttttTtTgt atgtgggact ctctatcttc ttgggtagat CD 1951 aatcgatTgt ctttcatttt gatagtgagt agtttttata caaagtcaag CD 2001 tcaagaataa SQ SEQUENCE 670 AA; MYLLIVFLPL LGSSVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV ALGASACYLR IAPWISSEMF DASWGFLFDS LTVVMLIVVT SISSLVHLYS ISYMSEDPHS PRFMCYLSIF TFFMLMLVTG DNFLQLFLGW EGVGLASYLL IHFWFTRLQA DKAAIKAMLV NRVGDFGLAL GILGCFTLFQ TVDFSTIFAC ASVPRNSWIF CNMRLNAISL ICILLFIGAV GKSAQIGLHT WLPDAMEGPT PVSALIHAAT MVTAGVFMIA RCSPLFEYSP TALIVITFAG AMTSFLAATT GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLIGSLSLI GFPFLTGFYS KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDISRCHDAP IPMAIPLILL ALGSLFVGYL AKDMMIGLGT NFWANSLLVL PKNEILAESE FAAPTIIKLI PILFSTLGAF VAYNVNLVAD QFQRAFQTST FCNRLYSFFN KRWFFDQVLN DFLVRSFLRF GYEVSFEALD KGAIEILGPY GISYTFRRLA ERISQLQSGF VYHYAFAMLL GLTLFVTFFC MWDSLSSWVD NRLSFILIVS SFYTKSSQE* // ID EU999006_1 STANDARD; PRT; 395 AA. AC EU999006; DT Tue Jul 21 07:06:16 2009 DE Arabidopsis thaliana NADH dehydrogenase subunit 7 mRNA, complete OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Mitochondrion 8 (4), 319-327 (2008) RL PUBMED 18678284 FT Full length CDS FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ACH78248.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 7 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 1185 FT DIRECTIONS : positive FT EDITING : 8 I(atC) -> I(atT) FT EDITING : 13 S(tCg) -> L(tTg) FT EDITING : 26 S(tCa) -> L(tTa) FT EDITING : 46 S(tCa) -> L(tTa) FT EDITING : 67 S(tCt) -> F(tTt) FT EDITING : 70 S(tCa) -> L(tTa) FT EDITING : 71 D(gaC) -> D(gaT) FT EDITING : 82 H(Cat) -> Y(Tat) FT EDITING : 84 S(tCa) -> L(tTa) FT EDITING : 106 R(Cgt) -> C(Tgt) FT EDITING : 112 S(tCa) -> L(tTa) FT EDITING : 115 S(tCa) -> L(tTa) FT EDITING : 193 S(tCa) -> L(tTa) FT EDITING : 233 S(tCg) -> L(tTg) FT EDITING : 242 H(Cat) -> Y(Tat) FT EDITING : 245 S(tCg) -> L(tTg) FT EDITING : 247 L(Ctt) -> F(Ttt) FT EDITING : 257 R(Cgc) -> C(Tgc) FT EDITING : 265 I(atC) -> I(atT) FT EDITING : 309 S(tCa) -> L(tTa) FT EDITING : 321 S(tcC) -> S(tcT) FT EDITING : 353 R(Cgt) -> C(Tgt) FT EDITING : 360 S(tCt) -> F(tTt) FT EDITING : 363 S(tCa) -> L(tTa) FT EDITING : 368 S(tCt) -> F(tTt) FT EDITING : 375 P(cCa) -> L(cTa) FT EDITING : 379 V(gtC) -> V(gtT) FT CODON_START : 1 CL CDNALEN 1185 NT; CD 1 atgacgacta ggaaaaggca aatCaaaaat tttacttCga attttggacc CD 51 tcaacatcct gctgctcatg gtgtttCacg attagtattg gaaatgaacg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggatCact ccatagaggg CD 151 actgagaaat taatagagta caaaacttat cttcaagctt taccttattC CD 201 tgatcgttCa gaCtatgttt ctatgatggc ccaagaacac gctCattctt CD 251 Cagctgtaga gaaacttttg aattgcgagg taccattacg agctcaatat CD 301 atacgagtgt tattcCgtga aataactcga atttCaaatc attCacttgc CD 351 tttaactact catgctatgg atgtgggagc attaactccg ttcctgtggg CD 401 cttttgagga gcgggagaaa ttgttggaat tctatgaaag agtctcggga CD 451 gccaggatgc atgccagttt catacgacca ggtggagtgg cacaagatct CD 501 gcctcttggc ttatgtcgag atattgattc cttcacacaa caatttgctt CD 551 ctcgtatcga tgaattagaa gagatgtCaa ccggcaaccg tatctggaaa CD 601 caacgattag tggatattgg tactgtcact gcacagcaag caaaggattg CD 651 gggattcagt ggtgtaatgt taagaggtcc aggggtatgc tgggattCgc CD 701 gaagagcagc accttacgat gttCatgacc aatCggatCt tgacgtacca CD 751 gtaggtacca gaggagatCg ctatgatcgt tactgtatcc gtatCgaaga CD 801 gatgcgacaa agtcttcgga tcattgtgca atgtcttaat caaatgccta CD 851 gcggcatgat caaagccgat gatcgtaagc tatgtcctcc atcacgatgt CD 901 cgaatgaaac tatccatgga atcctCaatt caccatttcg aactttatac CD 951 agaaggtttt tcCgtaccag cttcttctac ctataccgca gttgaagcac CD 1001 ctaaaggaga atttggtgtc tttctggtca gtaatggaag caatcgtccc CD 1051 taccgtCgta aaataagagc acccggctCt gcccattCac aaggactcga CD 1101 ttCtatgtcc aaacatcaca tgcCagcaga tgtggtCacc atcataggta CD 1151 ctcaagatat tgtgtttgga gaggtggata gatag FT EDITED CDNA CD 1 atgacgacta ggaaaaggca aatTaaaaat tttacttTga attttggacc CD 51 tcaacatcct gctgctcatg gtgtttTacg attagtattg gaaatgaacg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggatTact ccatagaggg CD 151 actgagaaat taatagagta caaaacttat cttcaagctt taccttattT CD 201 tgatcgttTa gaTtatgttt ctatgatggc ccaagaacac gctTattctt CD 251 Tagctgtaga gaaacttttg aattgcgagg taccattacg agctcaatat CD 301 atacgagtgt tattcTgtga aataactcga atttTaaatc attTacttgc CD 351 tttaactact catgctatgg atgtgggagc attaactccg ttcctgtggg CD 401 cttttgagga gcgggagaaa ttgttggaat tctatgaaag agtctcggga CD 451 gccaggatgc atgccagttt catacgacca ggtggagtgg cacaagatct CD 501 gcctcttggc ttatgtcgag atattgattc cttcacacaa caatttgctt CD 551 ctcgtatcga tgaattagaa gagatgtTaa ccggcaaccg tatctggaaa CD 601 caacgattag tggatattgg tactgtcact gcacagcaag caaaggattg CD 651 gggattcagt ggtgtaatgt taagaggtcc aggggtatgc tgggattTgc CD 701 gaagagcagc accttacgat gttTatgacc aatTggatTt tgacgtacca CD 751 gtaggtacca gaggagatTg ctatgatcgt tactgtatcc gtatTgaaga CD 801 gatgcgacaa agtcttcgga tcattgtgca atgtcttaat caaatgccta CD 851 gcggcatgat caaagccgat gatcgtaagc tatgtcctcc atcacgatgt CD 901 cgaatgaaac tatccatgga atcctTaatt caccatttcg aactttatac CD 951 agaaggtttt tcTgtaccag cttcttctac ctataccgca gttgaagcac CD 1001 ctaaaggaga atttggtgtc tttctggtca gtaatggaag caatcgtccc CD 1051 taccgtTgta aaataagagc acccggctTt gcccattTac aaggactcga CD 1101 ttTtatgtcc aaacatcaca tgcTagcaga tgtggtTacc atcataggta CD 1151 ctcaagatat tgtgtttgga gaggtggata gatag SQ SEQUENCE 395 AA; MTTRKRQIKN FTLNFGPQHP AAHGVLRLVL EMNGEVVERA EPHIGLLHRG TEKLIEYKTY LQALPYFDRL DYVSMMAQEH AYSLAVEKLL NCEVPLRAQY IRVLFCEITR ILNHLLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMLTGNRIWK QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDLRRAAPYD VYDQLDFDVP VGTRGDCYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC RMKLSMESLI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRCKIRAPGF AHLQGLDFMS KHHMLADVVT IIGTQDIVFG EVDR* // ID EU999007_1 STANDARD; PRT; 287 AA. AC EU999007; DT Tue Jul 21 07:06:16 2009 DE Arabidopsis thaliana ORFX mRNA, partial cds; mitochondrial. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Mitochondrion 8 (4), 319-327 (2008) RL PUBMED 18678284 FT N-terminal not determined FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ACH78249.1 FT PROTEIN_NAME : ORFX FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 861 FT DIRECTIONS : positive FT EDITING : 20 S(tCg) -> L(tTg) FT EDITING : 33 R(Cgg) -> W(Tgg) FT EDITING : 48 F(ttC) -> F(ttT) FT EDITING : 49 P(Ccg) -> S(Tcg) FT EDITING : 54 S(tCt) -> F(tTt) FT EDITING : 55 P(cCa) -> L(cTa) FT EDITING : 58 S(tCa) -> L(tTa) FT EDITING : 121 L(Ctc) -> F(Ttc) FT EDITING : 122 H(Cat) -> Y(Tat) FT EDITING : 126 S(tCt) -> F(tTt) FT EDITING : 127 R(Cgc) -> C(Tgc) FT EDITING : 136 P(CCt) -> F(TTt) FT EDITING : 137 P(Ccc) -> S(Tcc) FT EDITING : 138 R(Cgg) -> W(Tgg) FT EDITING : 147 P(cCa) -> L(cTa) FT EDITING : 158 L(ctC) -> L(ctT) FT EDITING : 169 H(Cat) -> Y(Tat) FT EDITING : 177 S(tCg) -> L(tTg) FT EDITING : 180 P(Cca) -> S(Tca) FT EDITING : 194 P(cCa) -> L(cTa) FT EDITING : 196 P(cCa) -> L(cTa) FT EDITING : 215 P(Ccg) -> S(Tcg) FT EDITING : 217 L(Ctc) -> F(Ttc) FT EDITING : 222 S(tCc) -> F(tTc) FT EDITING : 231 I(atC) -> I(atT) FT EDITING : 234 R(Cgt) -> C(Tgt) FT EDITING : 249 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 861 NT; CD 1 aatccttcac ttttagcttt gaattactta tatatatcct atgaatttaa CD 51 tttcgcatCg gaaacgattc taggagaagt tcgaatccgt tccgttCgga CD 101 tattgatcgg tcttggtttg acatggttta cgtgttactg gttCCcggaa CD 151 gagttaatat CtcCattagc gtCacccttt cttaccctgc cttttgactc CD 201 gtattttgtt tgtacacaat taacggaggc cttttcgaca tttgttgcaa CD 251 cgtcttcaat agcatgctct tatttcgtct ttcctttaat aagttatcaa CD 301 atttggtgct ttttgatccc cagttgctat ggagaacaaa ggacgaaata CD 351 caatcgattc CtcCatttaa gtggttCtCg cttcttcttg ttcctgttcc CD 401 taactCCtCc cCgggtcgtt cccaatgttt ggcactttcC atacttcgtg CD 451 ggtgcaacat caacaaattc gctCatgatc aagttacaac ctaagatcta CD 501 tgacCatatt atgttaactg ttcgtatttC gttcattCca tcggtatgct CD 551 cccaggtacc tgtaattgtg atctgtttgc CagaacCaag gggtctttct CD 601 ttggaaacct tcacgaacaa tcgtcgtttt ttgatggttt ttCcgcttCt CD 651 cacagctgct ctttCcacac ctccggatat ctggtgccaa atCgtcgccC CD 701 gtttccttat ttctttgata atagagttgg ctatttttgt ggcatCgatt CD 751 gtacaagttc gtgaagaggg ctggacgagt ggaatgaggg agagcggctc CD 801 gatcgagaaa aaaaataaga gtagcccccc ccctagaacc tggcaaagta CD 851 actatcaatg a FT EDITED CDNA CD 1 aatccttcac ttttagcttt gaattactta tatatatcct atgaatttaa CD 51 tttcgcatTg gaaacgattc taggagaagt tcgaatccgt tccgttTgga CD 101 tattgatcgg tcttggtttg acatggttta cgtgttactg gttTTcggaa CD 151 gagttaatat TtcTattagc gtTacccttt cttaccctgc cttttgactc CD 201 gtattttgtt tgtacacaat taacggaggc cttttcgaca tttgttgcaa CD 251 cgtcttcaat agcatgctct tatttcgtct ttcctttaat aagttatcaa CD 301 atttggtgct ttttgatccc cagttgctat ggagaacaaa ggacgaaata CD 351 caatcgattc TtcTatttaa gtggttTtTg cttcttcttg ttcctgttcc CD 401 taactTTtTc cTgggtcgtt cccaatgttt ggcactttcT atacttcgtg CD 451 ggtgcaacat caacaaattc gctTatgatc aagttacaac ctaagatcta CD 501 tgacTatatt atgttaactg ttcgtatttT gttcattTca tcggtatgct CD 551 cccaggtacc tgtaattgtg atctgtttgc TagaacTaag gggtctttct CD 601 ttggaaacct tcacgaacaa tcgtcgtttt ttgatggttt ttTcgcttTt CD 651 cacagctgct ctttTcacac ctccggatat ctggtgccaa atTgtcgccT CD 701 gtttccttat ttctttgata atagagttgg ctatttttgt ggcatTgatt CD 751 gtacaagttc gtgaagaggg ctggacgagt ggaatgaggg agagcggctc CD 801 gatcgagaaa aaaaataaga gtagcccccc ccctagaacc tggcaaagta CD 851 actatcaatg a SQ SEQUENCE 287 AA; NPSLLALNYL YISYEFNFAL ETILGEVRIR SVWILIGLGL TWFTCYWFSE ELIFLLALPF LTLPFDSYFV CTQLTEAFST FVATSSIACS YFVFPLISYQ IWCFLIPSCY GEQRTKYNRF FYLSGFCFFL FLFLTFSWVV PNVWHFLYFV GATSTNSLMI KLQPKIYDYI MLTVRILFIS SVCSQVPVIV ICLLELRGLS LETFTNNRRF LMVFSLFTAA LFTPPDIWCQ IVACFLISLI IELAIFVALI VQVREEGWTS GMRESGSIEK KNKSSPPPRT WQSNYQ* // ID EU999008_1 STANDARD; PRT; 363 AA. AC EU999008; DT Tue Jul 21 07:06:16 2009 DE Arabidopsis thaliana ribosomal protein S4 mRNA, complete cds; OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Mitochondrion 8 (4), 319-327 (2008) RL PUBMED 18678284 FT Full length CDS FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ACH78250.1 FT PROTEIN_NAME : ribosomal protein S4 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 1089 FT DIRECTIONS : positive FT EDITING : 26 S(tCa) -> L(tTa) FT EDITING : 30 R(Cgg) -> W(Tgg) FT EDITING : 59 P(Ccg) -> S(Tcg) FT EDITING : 76 P(Ccc) -> S(Tcc) FT EDITING : 79 H(Cat) -> Y(Tat) FT EDITING : 100 P(cCa) -> L(cTa) FT EDITING : 103 P(cCa) -> L(cTa) FT EDITING : 111 P(cCg) -> L(cTg) FT EDITING : 126 P(cCg) -> L(cTg) FT EDITING : 175 S(tCa) -> L(tTa) FT EDITING : 319 S(tCg) -> L(tTg) FT EDITING : 323 H(Cat) -> Y(Tat) FT EDITING : 331 S(tCt) -> F(tTt) FT EDITING : 348 P(CCa) -> L(TTa) FT EDITING : 351 P(cCt) -> L(cTt) FT EDITING : 353 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 1089 NT; CD 1 atgtggctgc ttaaaaaact gattcaacga gatatagatt tgtccccatt CD 51 aagatttcaa acttgtcgtc tactttCagg aaatgttCgg aacagagaac CD 101 tgacaataat acaacgccgc attctccgaa gattgaggaa caggaagaga CD 151 tctattaaga agagaaagat ttatCcgaaa aaatatctta ccagttatat CD 201 acaattacaa actacacgaa agttgCccct ttttCatggg gatttaccca CD 251 tcacagagat gcacagagga acaaaacgaa cttcatatat cccttttcCa CD 301 ctcaatcCag aaacaagatt tgacgttatt cCgcttcgtc tccattttct CD 351 tgaaactatt cctcaagcaa ggcagcCgat aagtcatcga agggtttgtg CD 401 tgaataaagg aatggtaagc attactcatt ttaaactttc ccacggtgat CD 451 ataatatctt ttcaagaaaa taacgcgata atacgcggtg aagaaataag CD 501 gagatctttc tataaagaaa tttCagttga aaaaatcata ggcaaattac CD 551 tgcatcaacc gctaagaatg tggagaagaa gcaaaactga atggttccac CD 601 ctactcaaaa ctaagagggg atgccgccta ctactaaaat cccggttttt CD 651 gcaacagttg cgttcttcta tgcaagaaga agacttagaa agaacaaaga CD 701 agtttggatc cgaaaaagta tgcttaggaa gttccttcgc tgagcacaag CD 751 agaatgaaga ggaatttgtt aaaatcccta ttcttatcga agagaaggaa CD 801 ggataaaaac ctaaatcttc ctactcgaac aatcagtcct atagtttaca CD 851 actcttcttt atctttatat agtaattcga cctattgctt cgcatccccc CD 901 cataagttga ctatgaagag aagaatcaaa aggatcgaac tacctactca CD 951 ttattCggag gttaatCata gaacaccaaa agctgtggta tCttatggac CD 1001 ctaacatagg tcatatccct cacgacataa gattaaaaga tCCaaacctt CD 1051 cCtcttCgga gcagaaacgg acgtggccaa aacatataa FT EDITED CDNA CD 1 atgtggctgc ttaaaaaact gattcaacga gatatagatt tgtccccatt CD 51 aagatttcaa acttgtcgtc tactttTagg aaatgttTgg aacagagaac CD 101 tgacaataat acaacgccgc attctccgaa gattgaggaa caggaagaga CD 151 tctattaaga agagaaagat ttatTcgaaa aaatatctta ccagttatat CD 201 acaattacaa actacacgaa agttgTccct ttttTatggg gatttaccca CD 251 tcacagagat gcacagagga acaaaacgaa cttcatatat cccttttcTa CD 301 ctcaatcTag aaacaagatt tgacgttatt cTgcttcgtc tccattttct CD 351 tgaaactatt cctcaagcaa ggcagcTgat aagtcatcga agggtttgtg CD 401 tgaataaagg aatggtaagc attactcatt ttaaactttc ccacggtgat CD 451 ataatatctt ttcaagaaaa taacgcgata atacgcggtg aagaaataag CD 501 gagatctttc tataaagaaa tttTagttga aaaaatcata ggcaaattac CD 551 tgcatcaacc gctaagaatg tggagaagaa gcaaaactga atggttccac CD 601 ctactcaaaa ctaagagggg atgccgccta ctactaaaat cccggttttt CD 651 gcaacagttg cgttcttcta tgcaagaaga agacttagaa agaacaaaga CD 701 agtttggatc cgaaaaagta tgcttaggaa gttccttcgc tgagcacaag CD 751 agaatgaaga ggaatttgtt aaaatcccta ttcttatcga agagaaggaa CD 801 ggataaaaac ctaaatcttc ctactcgaac aatcagtcct atagtttaca CD 851 actcttcttt atctttatat agtaattcga cctattgctt cgcatccccc CD 901 cataagttga ctatgaagag aagaatcaaa aggatcgaac tacctactca CD 951 ttattTggag gttaatTata gaacaccaaa agctgtggta tTttatggac CD 1001 ctaacatagg tcatatccct cacgacataa gattaaaaga tTTaaacctt CD 1051 cTtcttTgga gcagaaacgg acgtggccaa aacatataa SQ SEQUENCE 363 AA; MWLLKKLIQR DIDLSPLRFQ TCRLLLGNVW NRELTIIQRR ILRRLRNRKR SIKKRKIYSK KYLTSYIQLQ TTRKLSLFYG DLPITEMHRG TKRTSYIPFL LNLETRFDVI LLRLHFLETI PQARQLISHR RVCVNKGMVS ITHFKLSHGD IISFQENNAI IRGEEIRRSF YKEILVEKII GKLLHQPLRM WRRSKTEWFH LLKTKRGCRL LLKSRFLQQL RSSMQEEDLE RTKKFGSEKV CLGSSFAEHK RMKRNLLKSL FLSKRRKDKN LNLPTRTISP IVYNSSLSLY SNSTYCFASP HKLTMKRRIK RIELPTHYLE VNYRTPKAVV FYGPNIGHIP HDIRLKDLNL LLWSRNGRGQ NI* // ID FJ376598_1 STANDARD; PRT; 475 AA. AC FJ376598; DT Tue Jul 21 07:06:23 2009 DE Equisetum arvense cytochrome c oxidase subunit 1 gene, partial cds; OS mitochondrion Equisetum arvense (field horsetail) OC Equisetum arvense RN [1] RL Curr. Genet. (2008) In press RL PUBMED 19112563 FT N-terminal not determined FT C-terminal not determined FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ACL35771.1 FT PROTEIN_NAME : cytochrome c oxidase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 113/2 FT INTRON 189/2 FT INTRON 231/2 FT EDITING : 49 S(tCa) -> L(tTa) FT EDITING : 52 P(CCt) -> F(TTt) FT EDITING : 67 S(tCC) -> F(tTT) FT EDITING : 86 P(Ccg) -> S(Tcg) FT EDITING : 133 S(tCt) -> F(tTt) FT EDITING : 144 S(tCa) -> L(tTa) FT EDITING : 154 L(Ctc) -> F(Ttc) FT EDITING : 180 P(CCt) -> F(TTt) FT EDITING : 184 P(cCt) -> L(cTt) FT EDITING : 187 P(cCg) -> L(cTg) FT EDITING : 204 S(tCt) -> F(tTt) FT EDITING : 219 P(cCc) -> L(cTc) FT EDITING : 223 P(CCC) -> F(TTT) FT EDITING : 229 H(Cat) -> Y(Tat) FT EDITING : 247 F(ttC) -> F(ttT) FT EDITING : 256 Q(Cag) -> *(Tag) FT EDITING : 268 L(Ctg) -> L(Ttg) FT EDITING : 272 F(ttC) -> F(ttT) FT EDITING : 277 R(Cgt) -> C(Tgt) FT EDITING : 290 P(Cca) -> S(Tca) FT EDITING : 307 V(gtC) -> V(gtT) FT EDITING : 331 P(Ccc) -> S(Tcc) FT EDITING : 332 R(Cgt) -> C(Tgt) FT EDITING : 352 R(Cgc) -> C(Tgc) FT EDITING : 362 P(Ccc) -> S(Tcc) FT EDITING : 366 P(CcC) -> S(TcT) FT EDITING : 374 H(Cat) -> Y(Tat) FT EDITING : 375 L(Ctg) -> L(Ttg) FT EDITING : 378 S(tcC) -> S(tcT) FT EDITING : 380 T(acC) -> T(acT) FT EDITING : 394 Q(Cag) -> *(Tag) FT EDITING : 399 F(ttC) -> F(ttT) FT EDITING : 409 L(ctC) -> L(ctT) FT EDITING : 410 P(Cct) -> S(Tct) FT EDITING : 415 S(tcC) -> S(tcT) FT EDITING : 416 Q(Cag) -> *(Tag) FT EDITING : 443 L(ctC) -> L(ctT) FT EDITING : 451 C(tgC) -> C(tgT) FT EDITING : 456 Q(Cag) -> *(Tag) FT EDITING : 457 S(tcC) -> S(tcT) FT EDITING : 461 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1424 NT; CD 1 ctatatttaa tcttcggtgc catggctgga gtaatgggca catgcttctc CD 51 cgtactaatt cgtatggaat tggcacaacc tggccctcag atcctgggtg CD 101 gaaatcatca actctataat gtgttaataa ccgctcacgc tttttCaatg CD 151 attCCtttca tggttatgcc ggcgatgata ggtggatttg gtaattggtC CD 201 Cgttccgatt cttatcggtg cacctgacat ggcctttcca cgcttgaata CD 251 atattCcgtt ctggttgttg ccacccgcgc tgttgctttt attaagctca CD 301 gccctgatag aggtgggtag cgggactggg tggacggtct acccgcccct CD 351 aagcggtata acgagtcatt ctggaggagc ggttgattta gccatttCta CD 401 gtcttcatct atcaggtgtt tcatctattt Caggttccat taattttatc CD 451 actactatcC tcaatatgcg cggacctgga atgaccatgc atagattacc CD 501 cctattcgtg tggtccgttt tagtgacagc attcccaCCt ttattatccc CD 551 CtccagtacC ggcaggggca attaccatgt tattaaccga tcgaaacttt CD 601 aataccactt Ctttcgatcc tgctggaggg ggagacccta tcttatacca CD 651 gcatcCcttt tggttcCCCg gccatccaga ggttCatatt cgctaatttt CD 701 gccaggattc ggtatcatta gtcatatcgt atccaccttt Ccaagaaaac CD 751 cagtcttcgg ttatcCaggc atggtgtatg ccatgatcag tattggagtt CD 801 cCtgggttta ttgttCgggc tcatcataCg tttactgtgg gattagacgt CD 851 tgatacacgt gcttactCca cggcggccac catgattatc gccgtgccca CD 901 ccggaataaa gatttttagt Cggatagcta ccatgtgggg aggttcaata CD 951 cgatacaaaa cccccatgtt attcgcggta gggttcatct CccCgttcac CD 1001 tataggagga cttactggta tagtattggc taattccggg ctagacattg CD 1051 ctcCgcatga tacttattac gtggttgcac attCccatta tgtacCcCct CD 1101 atgggagccg tttttgctcC atCtgcagga ttcCactacC ggatagggaa CD 1151 aatatctggt cttcaatatc cagagacttC aggtcaaatt cattttCgga CD 1201 ttactttctt cggagtgaat ttgactCCct ttcccatgca tttcCCaggt CD 1251 ctttcgggta tgccacgtcg cattcctgat tatccggatg cttacgccgg CD 1301 atggaatgcc ttgagtagtt tcggctctCa cgtctccgta attggcattt CD 1351 tgCgtttctt tgcttCagtc Ctctcgactc Cgatcagtga acaaatttgt CD 1401 gctccaaatc cttgggcggc ggtt FT EDITED CDNA CD 1 ctatatttaa tcttcggtgc catggctgga gtaatgggca catgcttctc CD 51 cgtactaatt cgtatggaat tggcacaacc tggccctcag atcctgggtg CD 101 gaaatcatca actctataat gtgttaataa ccgctcacgc tttttTaatg CD 151 attTTtttca tggttatgcc ggcgatgata ggtggatttg gtaattggtT CD 201 Tgttccgatt cttatcggtg cacctgacat ggcctttcca cgcttgaata CD 251 atattTcgtt ctggttgttg ccacccgcgc tgttgctttt attaagctca CD 301 gccctgatag aggtgggtag cgggactggg tggacggtct acccgcccct CD 351 aagcggtata acgagtcatt ctggaggagc ggttgattta gccatttTta CD 401 gtcttcatct atcaggtgtt tcatctattt Taggttccat taattttatc CD 451 actactatcT tcaatatgcg cggacctgga atgaccatgc atagattacc CD 501 cctattcgtg tggtccgttt tagtgacagc attcccaTTt ttattatccc CD 551 TtccagtacT ggcaggggca attaccatgt tattaaccga tcgaaacttt CD 601 aataccactt Ttttcgatcc tgctggaggg ggagacccta tcttatacca CD 651 gcatcTcttt tggttcTTTg gccatccaga ggttTatatt cgctaatttt CD 701 gccaggattc ggtatcatta gtcatatcgt atccaccttt Tcaagaaaac CD 751 cagtcttcgg ttatcTaggc atggtgtatg ccatgatcag tattggagtt CD 801 cTtgggttta ttgttTgggc tcatcataTg tttactgtgg gattagacgt CD 851 tgatacacgt gcttactTca cggcggccac catgattatc gccgtgccca CD 901 ccggaataaa gatttttagt Tggatagcta ccatgtgggg aggttcaata CD 951 cgatacaaaa cccccatgtt attcgcggta gggttcatct TccTgttcac CD 1001 tataggagga cttactggta tagtattggc taattccggg ctagacattg CD 1051 ctcTgcatga tacttattac gtggttgcac attTccatta tgtacTcTct CD 1101 atgggagccg tttttgctcT atTtgcagga ttcTactacT ggatagggaa CD 1151 aatatctggt cttcaatatc cagagacttT aggtcaaatt cattttTgga CD 1201 ttactttctt cggagtgaat ttgactTTct ttcccatgca tttcTTaggt CD 1251 ctttcgggta tgccacgtcg cattcctgat tatccggatg cttacgccgg CD 1301 atggaatgcc ttgagtagtt tcggctctTa cgtctccgta attggcattt CD 1351 tgTgtttctt tgcttTagtc Ttctcgactc Tgatcagtga acaaatttgt CD 1401 gctccaaatc cttgggcggc ggtt SQ SEQUENCE 475 AA; LYLIFGAMAG VMGTCFSVLI RMELAQPGPQ ILGGNHQLYN VLITAHAFLM IFFMVMPAMI GGFGNWFVPI LIGAPDMAFP RLNNISFWLL PPALLLLLSS ALIEVGSGTG WTVYPPLSGI TSHSGGAVDL AIFSLHLSGV SSILGSINFI TTIFNMRGPG MTMHRLPLFV WSVLVTAFPF LLSLPVLAGA ITMLLTDRNF NTTFFDPAGG GDPILYQHLF WFFGHPEVYI R*FCQDSVSL VISYPPFQEN QSSVI*AWCM P*SVLEFLGL LFGLIICLLW D*TLIHVLTS RRPP*LSPCP PE*RFLVG*L PCGEVQYDTK PPCYSR*GSS SCSL*EDLLV *YWLIPG*TL LCMILITWLH ISIMYSLWEP FLLYLQDSTT G*GKYLVFNI QRL*VKFIFG LLSSE*I*LS FPCIS*VFRV CHVAFLIIRM LTPDGMP*VV SALTSP*LAF CVSLL*SSRL *SVNKFVLQI LGRRX // ID FJ376600_1 STANDARD; PRT; 354 AA. AC FJ376600; DT Tue Jul 21 07:06:23 2009 DE Equisetum arvense apocytochrome b gene, partial cds; mitochondrial. OS mitochondrion Equisetum arvense (field horsetail) OC Equisetum arvense RN [1] RL Curr. Genet. (2008) In press RL PUBMED 19112563 FT N-terminal not determined FT C-terminal not determined FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ACL35773.1 FT PROTEIN_NAME : apocytochrome b FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 1061 FT DIRECTIONS : positive FT EDITING : 20 S(tCa) -> L(tTa) FT EDITING : 23 L(ctC) -> L(ctT) FT EDITING : 25 P(Ccg) -> S(Tcg) FT EDITING : 35 S(tCa) -> L(tTa) FT EDITING : 315 S(tCg) -> L(tTg) FT EDITING : 318 R(Cgc) -> C(Tgc) FT EDITING : 320 P(Ccg) -> S(Tcg) FT EDITING : 345 P(CCc) -> F(TTc) FT EDITING : 346 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 1061 NT; CD 1 catttgatag attatcccac cccaagcaat ctaagttatt ggtgggggtt CD 51 cggttcgtCa gcaggtctCc gtCcggtcat tcagatgatt actggcgttc CD 101 tatCagcgca acattataca cctcatgtcg atctagcttt ccacagcgtg CD 151 gaacacatta tgagggatgt aagaggaggc tggttgctcc gttacatgca CD 201 tgctaatggg gccagtatgt tctttatggt agtctatctc catattttcc CD 251 gtggtttata ctatggaagt tatatcagtc ccagagaatt tgtttggtgc CD 301 ctcggagtgg taatcttcct attaatgatc gtcaccgctt ttatagggta CD 351 tgtactgcct tggggtcaaa tgagtttttg gggagccact gtaattacca CD 401 gcttagccag tgctatacct atagtaggag acactatcgt cacttggctt CD 451 tggggcggat tttccgtaga caatgccacc ctaactcgtt tttttagcct CD 501 tcactactta ttccctttta tcattgcagg cgctagtctt attcatttgg CD 551 ctgcattgca tcaatatgga tccaataatc cgttgggtat ccattcctcc CD 601 gtggataaaa tcgcttttta tccttatatt tacgttaaag atctagtagg CD 651 ttgggtagca ttcgccatct tcttctccct ttggctcttt tatgcaccca CD 701 atgtcttagg acatcccgac aattatatac ccgccaatcc gatgtccacg CD 751 ccggctcata ttgtaccaga atggtatttc ctaccaatct atgccatttt CD 801 gcggagtatc cccgacaaat tagggggggt agttgccata ggactagttt CD 851 ttatctcact attggcccta cccttcatcg acacaaatgc agtgcgtagt CD 901 tcgagttttc gacttattaa ccaaaggttg ttctgggtac tttCggcaga CD 951 tCgcttgCcg ttgggttgga tcggatgcca gccagtggag gcaccttatg CD 1001 tgactattgg ccaaatggct tctggagtat ttCCctCgta tttcgccata CD 1051 acgcccattc t FT EDITED CDNA CD 1 catttgatag attatcccac cccaagcaat ctaagttatt ggtgggggtt CD 51 cggttcgtTa gcaggtctTc gtTcggtcat tcagatgatt actggcgttc CD 101 tatTagcgca acattataca cctcatgtcg atctagcttt ccacagcgtg CD 151 gaacacatta tgagggatgt aagaggaggc tggttgctcc gttacatgca CD 201 tgctaatggg gccagtatgt tctttatggt agtctatctc catattttcc CD 251 gtggtttata ctatggaagt tatatcagtc ccagagaatt tgtttggtgc CD 301 ctcggagtgg taatcttcct attaatgatc gtcaccgctt ttatagggta CD 351 tgtactgcct tggggtcaaa tgagtttttg gggagccact gtaattacca CD 401 gcttagccag tgctatacct atagtaggag acactatcgt cacttggctt CD 451 tggggcggat tttccgtaga caatgccacc ctaactcgtt tttttagcct CD 501 tcactactta ttccctttta tcattgcagg cgctagtctt attcatttgg CD 551 ctgcattgca tcaatatgga tccaataatc cgttgggtat ccattcctcc CD 601 gtggataaaa tcgcttttta tccttatatt tacgttaaag atctagtagg CD 651 ttgggtagca ttcgccatct tcttctccct ttggctcttt tatgcaccca CD 701 atgtcttagg acatcccgac aattatatac ccgccaatcc gatgtccacg CD 751 ccggctcata ttgtaccaga atggtatttc ctaccaatct atgccatttt CD 801 gcggagtatc cccgacaaat tagggggggt agttgccata ggactagttt CD 851 ttatctcact attggcccta cccttcatcg acacaaatgc agtgcgtagt CD 901 tcgagttttc gacttattaa ccaaaggttg ttctgggtac tttTggcaga CD 951 tTgcttgTcg ttgggttgga tcggatgcca gccagtggag gcaccttatg CD 1001 tgactattgg ccaaatggct tctggagtat ttTTctTgta tttcgccata CD 1051 acgcccattc t SQ SEQUENCE 354 AA; HLIDYPTPSN LSYWWGFGSL AGLRSVIQMI TGVLLAQHYT PHVDLAFHSV EHIMRDVRGG WLLRYMHANG ASMFFMVVYL HIFRGLYYGS YISPREFVWC LGVVIFLLMI VTAFIGYVLP WGQMSFWGAT VITSLASAIP IVGDTIVTWL WGGFSVDNAT LTRFFSLHYL FPFIIAGASL IHLAALHQYG SNNPLGIHSS VDKIAFYPYI YVKDLVGWVA FAIFFSLWLF YAPNVLGHPD NYIPANPMST PAHIVPEWYF LPIYAILRSI PDKLGGVVAI GLVFISLLAL PFIDTNAVRS SSFRLINQRL FWVLLADCLS LGWIGCQPVE APYVTIGQMA SGVFFLYFAI TPIL // ID FJ389746_1 STANDARD; PRT; 63 AA. AC FJ389746; DT Tue Jul 21 07:06:23 2009 DE Equisetum arvense ATPase subunit 9 (atp9) gene, partial cds; OS mitochondrion Equisetum arvense (field horsetail) OC Equisetum arvense RN [1] RL Curr. Genet. (2008) In press RL PUBMED 19112563 FT N-terminal not determined FT C-terminal not determined FT GENE : atp9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ACL36052.1 FT PROTEIN_NAME : ATPase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 190 FT DIRECTIONS : positive FT EDITING : 23 P(Cca) -> S(Tca) FT EDITING : 24 S(tCg) -> L(tTg) FT EDITING : 27 P(Ccc) -> S(Tcc) FT EDITING : 38 S(tCa) -> L(tTa) FT EDITING : 44 S(tCa) -> L(tTa) FT EDITING : 48 P(cCa) -> L(cTa) FT EDITING : 54 S(tCg) -> L(tTg) FT CODON_START : 2 CL CDNALEN 190 NT; CD 1 aattggagca ggagcagcaa caatggcttt ggcgggagct gccgtaggta CD 51 ttggacacgt gtttagtCca tCgattcatC ccgtggcgcg aaatccatca CD 101 ctggctaaac aatCattcgg ttatgccatc tCaggcttcg ctcCaactga CD 151 agctattgcc tCgttcgcct taatgatggc atttttaata FT EDITED CDNA CD 1 aattggagca ggagcagcaa caatggcttt ggcgggagct gccgtaggta CD 51 ttggacacgt gtttagtTca tTgattcatT ccgtggcgcg aaatccatca CD 101 ctggctaaac aatTattcgg ttatgccatc tTaggcttcg ctcTaactga CD 151 agctattgcc tTgttcgcct taatgatggc atttttaata SQ SEQUENCE 63 AA; IGAGAATMAL AGAAVGIGHV FSSLIHSVAR NPSLAKQLFG YAILGFALTE AIALFALMMA FLI // ID FJ595983_1 STANDARD; PRT; 302 AA. AC FJ595983; DT Tue Jul 21 07:06:29 2009 DE Helianthus annuus ATPase subunit 6 (atp6) mRNA, complete cds; OS mitochondrion Helianthus annuus (common sunflower) OC Helianthus annuus RN [1] RL Unpublished FT Full length CDS FT GENE : atp6 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ACR54092.1 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 906 FT DIRECTIONS : positive FT EDITING : 145 I(aTt) -> T(aCt) FT CODON_START : 1 CL CDNALEN 906 NT; CD 1 atgagagtag taaaggatta ttatgtaacg attgaaagaa ctgtaactga CD 51 caacgcaata atttttgatt atcaccatta ccataataat tattattatt CD 101 ataacctgag tgcttttgct gagatgcaga ctcggactca ggcacctagc CD 151 ccgcttgagc aattttccat tctcccattg attcctatga atataggaaa CD 201 cttgtatttc tcattcacaa attcatcttt gtttatgctg ctaactctca CD 251 gtttggtcct acttctgatt cattttgtta ctaaaaaagg aggaggaaac CD 301 ttagtaccaa atgcttggca atccttggta gagcttattt atgatttcgt CD 351 gctgaacctg gtaaacgaac aaataggggg tctttcagga aatgttaaac CD 401 aaaagttttt cccttgcatc ttggtcactt ttaTtttttt gttattttgt CD 451 aatcttcagg gtatgatacc ttatagcttc acagttacaa gtcattttct CD 501 cattacttta ggtctctcat tttctatttt tattggcatt actatagtgg CD 551 gatttcaaag aaacgggctt cattttttaa gcttcttatt acccgcagga CD 601 gtcccactgc cattagcacc ttttttagta ctccttgagc taatttctta CD 651 ttgttttcgc gcattaagct taggaatacg tttatttgct aatatgatgg CD 701 ccggtcatag tttagtaaag attttaagtg ggttcgcttg gactatgcta CD 751 tgtatgaatg atcttttgta ttttataggg gatcttggtc ctttatttat CD 801 agttcttgca ttaaccggtc tggaattagg tgtagctata ttacaagctt CD 851 atgtttttac gatcttaatc tgtatttact tgaatgatgc tataaatctc CD 901 cattaa FT EDITED CDNA CD 1 atgagagtag taaaggatta ttatgtaacg attgaaagaa ctgtaactga CD 51 caacgcaata atttttgatt atcaccatta ccataataat tattattatt CD 101 ataacctgag tgcttttgct gagatgcaga ctcggactca ggcacctagc CD 151 ccgcttgagc aattttccat tctcccattg attcctatga atataggaaa CD 201 cttgtatttc tcattcacaa attcatcttt gtttatgctg ctaactctca CD 251 gtttggtcct acttctgatt cattttgtta ctaaaaaagg aggaggaaac CD 301 ttagtaccaa atgcttggca atccttggta gagcttattt atgatttcgt CD 351 gctgaacctg gtaaacgaac aaataggggg tctttcagga aatgttaaac CD 401 aaaagttttt cccttgcatc ttggtcactt ttaCtttttt gttattttgt CD 451 aatcttcagg gtatgatacc ttatagcttc acagttacaa gtcattttct CD 501 cattacttta ggtctctcat tttctatttt tattggcatt actatagtgg CD 551 gatttcaaag aaacgggctt cattttttaa gcttcttatt acccgcagga CD 601 gtcccactgc cattagcacc ttttttagta ctccttgagc taatttctta CD 651 ttgttttcgc gcattaagct taggaatacg tttatttgct aatatgatgg CD 701 ccggtcatag tttagtaaag attttaagtg ggttcgcttg gactatgcta CD 751 tgtatgaatg atcttttgta ttttataggg gatcttggtc ctttatttat CD 801 agttcttgca ttaaccggtc tggaattagg tgtagctata ttacaagctt CD 851 atgtttttac gatcttaatc tgtatttact tgaatgatgc tataaatctc CD 901 cattaa SQ SEQUENCE 302 AA; MRVVKDYYVT IERTVTDNAI IFDYHHYHNN YYYYNLSAFA EMQTRTQAPS PLEQFSILPL IPMNIGNLYF SFTNSSLFML LTLSLVLLLI HFVTKKGGGN LVPNAWQSLV ELIYDFVLNL VNEQIGGLSG NVKQKFFPCI LVTFTFLLFC NLQGMIPYSF TVTSHFLITL GLSFSIFIGI TIVGFQRNGL HFLSFLLPAG VPLPLAPFLV LLELISYCFR ALSLGIRLFA NMMAGHSLVK ILSGFAWTML CMNDLLYFIG DLGPLFIVLA LTGLELGVAI LQAYVFTILI CIYLNDAINL H* // ID SBU38309_1 STANDARD; PRT; 108 AA. AC U38309; DT Tue Jul 21 07:06:40 2009 DE Sorghum bicolor hypothetical URF107 mRNA, complete cds. OS mitochondrion Sorghum bicolor (sorghum) OC Sorghum bicolor RN [1] RL Plant J. 10 (1), 123-133 (1996) RL PUBMED 8758982 FT Full length CDS FT GENE : FT NOTE : hypothetical URF107 FT LOCUS_TAG : FT PROTEIN_ID : AAC49458.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 691 - 1014 FT DIRECTIONS : positive FT EDITING : 12 S(tCa) -> L(tTa) FT EDITING : 20 S(tCc) -> F(tTc) FT EDITING : 39 S(tCc) -> F(tTc) FT EDITING : 40 P(Cca) -> S(Tca) FT CODON_START : 1 CL CDNALEN 324 NT; CD 1 atgtcgcgac tctacatgtt agaaggagct aaatCaatag gtgctatagc CD 51 tgtagtttCc gctgtagcgg gagcttccgc cggtatttgg aatgggatga CD 101 aaagaaagga aacttCcCca ttgcatcaat tcatgctatt tgccgcttgt CD 151 cccatcatag tcgcggtact gctttttgtt gttgtcttac tacaataccg CD 201 ctcgccgcta tacagccatg cgataatcga gcaaatcata gcgcacaaca CD 251 ttcaagttgg ccatccaatg gaggtcgact acggatggtt tggcgtaaaa CD 301 gtgagcgtca tccgtccaaa gtag FT EDITED CDNA CD 1 atgtcgcgac tctacatgtt agaaggagct aaatTaatag gtgctatagc CD 51 tgtagtttTc gctgtagcgg gagcttccgc cggtatttgg aatgggatga CD 101 aaagaaagga aacttTcTca ttgcatcaat tcatgctatt tgccgcttgt CD 151 cccatcatag tcgcggtact gctttttgtt gttgtcttac tacaataccg CD 201 ctcgccgcta tacagccatg cgataatcga gcaaatcata gcgcacaaca CD 251 ttcaagttgg ccatccaatg gaggtcgact acggatggtt tggcgtaaaa CD 301 gtgagcgtca tccgtccaaa gtag SQ SEQUENCE 108 AA; MSRLYMLEGA KLIGAIAVVF AVAGASAGIW NGMKRKETFS LHQFMLFAAC PIIVAVLLFV VVLLQYRSPL YSHAIIEQII AHNIQVGHPM EVDYGWFGVK VSVIRPK* // ID X52865_1 STANDARD; PRT; 130 AA. AC X52865; DT Tue Jul 21 07:06:42 2009 DE Z.mays mitochondrial COX2 mRNA for cytochrome c oxidase subunit II. OS mitochondrion Zea mays OC Zea mays RN [1] RL Nucleic Acids Res. 18 (17), 5189-5196 (1990) RL PUBMED 1698279 FT Full length CDS FT GENE : COX2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA37046.1 FT PROTEIN_NAME : cytochrome-c oxidase FT EVIDENCE : FT EXCEPTION : FT REGIONS : 106 - 493 FT DIRECTIONS : positive FT EDITING : 5 S(tCa) -> L(tTa) FT EDITING : 11 L(Ctc) -> F(Ttc) FT EDITING : 26 S(tCt) -> F(tTt) FT EDITING : 56 S(tCa) -> L(tTa) FT EDITING : 57 R(Cgg) -> W(Tgg) FT EDITING : 87 R(Cgg) -> W(Tgg) FT EDITING : 129 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 388 NT; CD 1 atgattcttc gttCattaga atgtcgattt Ctcacaatcg ctctttgtga CD 51 tgctgcggaa ccatggcaat taggatCtca agacgcagca acacctatga CD 101 tgcaaggaat cantgactta catcacgata tctnnttctt cctnantctg CD 151 attttggttt ttgtatCaCg gatgttggtt cgcgcnttat ggcatttcaa CD 201 cgagcaaact aatccaatcc cgcaaaggat tgttcatgga actactatcg CD 251 aaattattCg gaccattttt cctagtgtca ttctattgtt cattgctata CD 301 ccatcgtttg ctctgttata ctcaatggac ggggtattag tagatccagc CD 351 cattactatc aaagctattg gacatcnatg gtatCgga FT EDITED CDNA CD 1 atgattcttc gttTattaga atgtcgattt Ttcacaatcg ctctttgtga CD 51 tgctgcggaa ccatggcaat taggatTtca agacgcagca acacctatga CD 101 tgcaaggaat cantgactta catcacgata tctnnttctt cctnantctg CD 151 attttggttt ttgtatTaTg gatgttggtt cgcgcnttat ggcatttcaa CD 201 cgagcaaact aatccaatcc cgcaaaggat tgttcatgga actactatcg CD 251 aaattattTg gaccattttt cctagtgtca ttctattgtt cattgctata CD 301 ccatcgtttg ctctgttata ctcaatggac ggggtattag tagatccagc CD 351 cattactatc aaagctattg gacatcnatg gtatTgga SQ SEQUENCE 130 AA; MILRLLECRF FTIALCDAAE PWQLGFQDAA TPMMQGIXDL HHDIXFFXXL ILVFVLWMLV RXLWHFNEQT NPIPQRIVHG TTIEIIWTIF PSVILLFIAI PSFALLYSMD GVLVDPAITI KAIGHXWYWX // ID X52866_1 STANDARD; PRT; 259 AA. AC X52866; DT Tue Jul 21 07:06:42 2009 DE P.sativum mitochondrial COX2 mRNA for cytochrome c oxidase subunit OS mitochondrion Pisum sativum (pea) OC Pisum sativum RN [1] RL Nucleic Acids Res. 18 (17), 5189-5196 (1990) RL PUBMED 1698279 FT C-terminal not determined FT GENE : COX2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA37047.2 FT PROTEIN_NAME : cytochrome-c oxidase FT EVIDENCE : FT EXCEPTION : FT REGIONS : 110 - 886 FT DIRECTIONS : positive FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 54 R(Cgg) -> W(Tgg) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 92 P(cCg) -> L(cTg) FT EDITING : 126 R(Cgg) -> W(Tgg) FT EDITING : 135 S(agC) -> S(agT) FT EDITING : 147 T(aCg) -> M(aTg) FT EDITING : 158 S(tCa) -> L(tTa) FT EDITING : 181 P(Cct) -> S(Tct) FT EDITING : 185 P(cCt) -> L(cTt) FT EDITING : 210 S(tCg) -> L(tTg) FT EDITING : 240 P(Cct) -> S(Tct) FT EDITING : 247 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 777 NT; CD 1 atgaaattag aatggctatt cctcacgatt gctccntgtg atgcagcgga CD 51 accatggcaa ttaggatttc aagacgcagc aacacctatg atgcaaggaa CD 101 taatagactt acatcacgat atctttttct tcctcattct tattttggtt CD 151 ttcgtatCaC ggatcttggt tcgcgcttta tggcatttcc actataaaaa CD 201 aaatccaatc ccgcaaagga ttgttcatgg aactactatc gagattcttC CD 251 ggaccatatt tcctagtatc atccCgatgt tcattgctat accatcattt CD 301 gctctgttat actcaatnnn cgaggtagta gtagatccag ccatgactat CD 351 caaagctatt ggncatcaat ggtatCggac ttangagtat tcagactata CD 401 acagCtccga tgaacagtca ctcacttttg acagttataC gattccagaa CD 451 gatgatctag aattgggtca atCacgttta ttagaagtgg acaatagagt CD 501 ggttgtacca gccaaaactc atctacgtat tattgtaaca Cctgctgatg CD 551 tacCtcatag ttgggctgta ccttccttag gtgtcaaatg tgatgctgta CD 601 cctggncgtt taaatcagat ctctatttCg ntacaacgag aaggggttta CD 651 ctatggtcag tgcagtgaga tttgtggaac taatcatgcc tttatgccta CD 701 tngtcgtaga agctgttCct agtaaagatt atggttctCg ggtatccaat CD 751 caattantcc cacaaacagg gnnnnnn FT EDITED CDNA CD 1 atgaaattag aatggctatt cctcacgatt gctccntgtg atgcagcgga CD 51 accatggcaa ttaggatttc aagacgcagc aacacctatg atgcaaggaa CD 101 taatagactt acatcacgat atctttttct tcctcattct tattttggtt CD 151 ttcgtatTaT ggatcttggt tcgcgcttta tggcatttcc actataaaaa CD 201 aaatccaatc ccgcaaagga ttgttcatgg aactactatc gagattcttT CD 251 ggaccatatt tcctagtatc atccTgatgt tcattgctat accatcattt CD 301 gctctgttat actcaatnnn cgaggtagta gtagatccag ccatgactat CD 351 caaagctatt ggncatcaat ggtatTggac ttangagtat tcagactata CD 401 acagTtccga tgaacagtca ctcacttttg acagttataT gattccagaa CD 451 gatgatctag aattgggtca atTacgttta ttagaagtgg acaatagagt CD 501 ggttgtacca gccaaaactc atctacgtat tattgtaaca Tctgctgatg CD 551 tacTtcatag ttgggctgta ccttccttag gtgtcaaatg tgatgctgta CD 601 cctggncgtt taaatcagat ctctatttTg ntacaacgag aaggggttta CD 651 ctatggtcag tgcagtgaga tttgtggaac taatcatgcc tttatgccta CD 701 tngtcgtaga agctgttTct agtaaagatt atggttctTg ggtatccaat CD 751 caattantcc cacaaacagg gnnnnnn SQ SEQUENCE 259 AA; MKLEWLFLTI AXCDAAEPWQ LGFQDAATPM MQGIIDLHHD IFFFLILILV FVLWILVRAL WHFHYKKNPI PQRIVHGTTI EILWTIFPSI ILMFIAIPSF ALLYSXXEVV VDPAMTIKAI XHQWYWTXEY SDYNSSDEQS LTFDSYMIPE DDLELGQLRL LEVDNRVVVP AKTHLRIIVT SADVLHSWAV PSLGVKCDAV PXRLNQISIL XQREGVYYGQ CSEICGTNHA FMPXVVEAVS SKDYGSWVSN QLXPQTGXX // ID X52867_1 STANDARD; PRT; 260 AA. AC X52867; DT Tue Jul 21 07:06:42 2009 DE T.aestivum mitochondrial COX2 mRNA for cytochrome c oxidase subunit OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Nucleic Acids Res. 18 (17), 5189-5196 (1990) RL PUBMED 1698279 FT C-terminal not determined FT GENE : COX2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA37048.1 FT PROTEIN_NAME : cytochrome-c oxidase FT EVIDENCE : FT EXCEPTION : FT REGIONS : 159 - 938 FT DIRECTIONS : positive FT EDITING : 10 F(ttC) -> F(ttT) FT EDITING : 26 S(tCt) -> F(tTt) FT EDITING : 57 R(Cgg) -> W(Tgg) FT EDITING : 87 R(Cgg) -> W(Tgg) FT EDITING : 129 R(Cgg) -> W(Tgg) FT EDITING : 150 T(aCg) -> M(aTg) FT EDITING : 156 P(CCa) -> L(TTa) FT EDITING : 161 S(tCa) -> L(tTa) FT EDITING : 184 P(Ccc) -> S(Tcc) FT EDITING : 207 S(tCa) -> L(tTa) FT EDITING : 213 S(tCg) -> L(tTg) FT EDITING : 228 R(Cgt) -> C(Tgt) FT EDITING : 235 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 780 NT; CD 1 atgattcttc gttcattatc atgtcgattC ctcacaatcg ctctttgtga CD 51 tgctgcggaa ccatggcaat taggatCtca agacgcagca acacctatga CD 101 tgcaaggaat cattgactta catcacgata tctntttctt cctcattctt CD 151 attttggttt tcgtattaCg gatgttggtt cgcgctttat ggcatttcaa CD 201 cgagcaaact aatccaatcc cacaaaggat tgttcatgga actactatcg CD 251 aaattattCg gaccatattt ccaagtgtca ttcttttgtt cattgctata CD 301 ccatcgtttg ctctgttata ctcaatggac ggggtattag tagatccagc CD 351 cattactatc aaagctattg gacatcaatg gtatCggact tatgagtatt CD 401 cggactataa cagttccgat gaacagtcac tcacttttga cagttataCg CD 451 attccagaag atgatCCaga attgggtcaa tCacgtttat tagaagttga CD 501 caatagagtg gttgtaccag ccaaaactca tctacgtatg attgtaacaC CD 551 ccgctgatgt acttcatagt tgggctgtac cttccttagg tgtcaaatgt CD 601 gatgctgtac ctggtcgttC aaatcttacc tccatctCgg tacaacgaga CD 651 aggagnntac tatggtcagt gcagtgagat tCgtggaact aatcatgcct CD 701 ttaCgcctat cgtcgtagaa gcagtgactt tgaaagatta tgcggattgg CD 751 gtatccaatc aattaatcct ccaaaccaac FT EDITED CDNA CD 1 atgattcttc gttcattatc atgtcgattT ctcacaatcg ctctttgtga CD 51 tgctgcggaa ccatggcaat taggatTtca agacgcagca acacctatga CD 101 tgcaaggaat cattgactta catcacgata tctntttctt cctcattctt CD 151 attttggttt tcgtattaTg gatgttggtt cgcgctttat ggcatttcaa CD 201 cgagcaaact aatccaatcc cacaaaggat tgttcatgga actactatcg CD 251 aaattattTg gaccatattt ccaagtgtca ttcttttgtt cattgctata CD 301 ccatcgtttg ctctgttata ctcaatggac ggggtattag tagatccagc CD 351 cattactatc aaagctattg gacatcaatg gtatTggact tatgagtatt CD 401 cggactataa cagttccgat gaacagtcac tcacttttga cagttataTg CD 451 attccagaag atgatTTaga attgggtcaa tTacgtttat tagaagttga CD 501 caatagagtg gttgtaccag ccaaaactca tctacgtatg attgtaacaT CD 551 ccgctgatgt acttcatagt tgggctgtac cttccttagg tgtcaaatgt CD 601 gatgctgtac ctggtcgttT aaatcttacc tccatctTgg tacaacgaga CD 651 aggagnntac tatggtcagt gcagtgagat tTgtggaact aatcatgcct CD 701 ttaTgcctat cgtcgtagaa gcagtgactt tgaaagatta tgcggattgg CD 751 gtatccaatc aattaatcct ccaaaccaac SQ SEQUENCE 260 AA; MILRSLSCRF LTIALCDAAE PWQLGFQDAA TPMMQGIIDL HHDIXFFLIL ILVFVLWMLV RALWHFNEQT NPIPQRIVHG TTIEIIWTIF PSVILLFIAI PSFALLYSMD GVLVDPAITI KAIGHQWYWT YEYSDYNSSD EQSLTFDSYM IPEDDLELGQ LRLLEVDNRV VVPAKTHLRM IVTSADVLHS WAVPSLGVKC DAVPGRLNLT SILVQREGXY YGQCSEICGT NHAFMPIVVE AVTLKDYADW VSNQLILQTN // ID X54621_1 STANDARD; PRT; 75 AA. AC X54621; DT Tue Jul 21 07:06:42 2009 DE A.thaliana mitochondrial mRNA for ATPase subunit 9. OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Nucleic Acids Res. 18 (23), 7164 (1990) RL PUBMED 1702206 FT Full length CDS FT GENE : atp9 FT NOTE : RNA editing alters this coding region in relation FT LOCUS_TAG : FT PROTEIN_ID : CAA38441.1 FT PROTEIN_NAME : ATPase subunit 9 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 3 - 227 FT DIRECTIONS : positive FT EDITING : 7 L(tTa) -> S(tCa) FT EDITING : 27 V(gtT) -> V(gtC) FT EDITING : 28 F(Ttc) -> L(Ctc) FT EDITING : 45 L(tTa) -> S(tCa) FT EDITING : 64 L(cTa) -> P(cCa) FT EDITING : 69 L(Ttg) -> L(Ctg) FT EDITING : 71 L(tTa) -> S(tCa) FT EDITING : 75 *(Tga) -> R(Cga) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gtgctaaatT aataggtgcc ggagctgcta caattgcttt CD 51 agccggagct gctgtcggta ttggaaacgt TTtcagttct ttgattcatt CD 101 ccgtggcgcg aaatccatca ttggctaaac aatTatttgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca ttgtttgccc Taatgatggc CD 201 ctttTtgatc tTattcgttt tcTga FT EDITED CDNA CD 1 atgttagaag gtgctaaatC aataggtgcc ggagctgcta caattgcttt CD 51 agccggagct gctgtcggta ttggaaacgt CCtcagttct ttgattcatt CD 101 ccgtggcgcg aaatccatca ttggctaaac aatCatttgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca ttgtttgccc Caatgatggc CD 201 ctttCtgatc tCattcgttt tcCga SQ SEQUENCE 75 AA; MLEGAKSIGA GAATIALAGA AVGIGNVLSS LIHSVARNPS LAKQSFGYAI LGFALTEAIA LFAPMMAFLI SFVFR // ID X57163_1 STANDARD; PRT; 496 AA. AC X57163; DT Tue Jul 21 07:06:42 2009 DE T.aestivum nad4 mRNA for NADH-ubiquinone oxidoreductase chain 4. OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Nucleic Acids Res. 19 (12), 3275-3282 (1991) RL PUBMED 1712098 FT Full length CDS FT GENE : nad4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA40452.1 FT PROTEIN_NAME : NADH-ubiquinone oxidoreductase chain 4 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 351 - 1838 FT DIRECTIONS : positive FT EDITING : 15 P(cCt) -> L(cTt) FT EDITING : 25 T(aCt) -> I(aTt) FT EDITING : 26 P(cCt) -> L(cTt) FT EDITING : 36 P(cCg) -> L(cTg) FT EDITING : 52 P(Ccc) -> S(Tcc) FT EDITING : 53 P(cCt) -> L(cTt) FT EDITING : 55 P(cCt) -> L(cTt) FT EDITING : 56 R(Cgg) -> W(Tgg) FT EDITING : 66 S(tCt) -> F(tTt) FT EDITING : 106 S(tCa) -> L(tTa) FT EDITING : 121 T(aCa) -> I(aTa) FT EDITING : 126 R(Cgt) -> C(Tgt) FT EDITING : 134 S(tCc) -> F(tTc) FT EDITING : 139 P(cCt) -> L(cTt) FT EDITING : 145 L(Ctt) -> F(Ttt) FT EDITING : 146 S(tCc) -> F(tTc) FT EDITING : 150 P(cCa) -> L(cTa) FT EDITING : 326 P(cCg) -> L(cTg) FT EDITING : 458 S(tCc) -> F(tTc) FT EDITING : 469 R(Cgg) -> W(Tgg) FT EDITING : 473 H(Cac) -> Y(Tac) FT EDITING : 478 P(CCg) -> L(TTg) FT CODON_START : 1 CL CDNALEN 1488 NT; CD 1 atgttagaac atttctgtga atgctatttc gatctaagtg gtcCtattct CD 51 ctgtcccgtg ctaggaagca ttaCtcCtct tttcattcca aattcttcaa CD 101 taagacCgat acgattgatt ggtctgtgcg tttctcttat tacttttttg CD 151 tatCcccCtg ttcCtCggat acaattcgat ccttctacgg ccaaatCtca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc catttgtata CD 251 tgggtataga cggtctttca ttattcttcg tgatattgac cacatttctg CD 301 atccctattt gcatttCagt gggttggtct ggtatgagaa gttttgggaa CD 351 agagtatatt aCagcatttc taattCgtga atttctaatg atcgccgtgt CD 401 Cctgcatgct ggatcCtcta ctattctatg ttCtttCcga aagcgtgcCa CD 451 atccctatgt tcatcattat aggggtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctatatac tttactggga tccgttttta CD 551 tgctattagc tattctgttg attcttctcc aaacaggaac caccgattta CD 601 caaattttat taaccactga atttagtgag cggcgccaaa tccttctatg CD 651 gattgctttt ttcgcctctt ttgccgtcaa agtgcctatg gtaccagttc CD 701 atatttggtt acccgaagcc catgtagagg cacctacggc tggatccgtc CD 751 atcttggctg gaattctttt aaaattggga acctacgggt ttttaagatt CD 801 ttccataccc atgtttcccg aggcgacact ttgtttcact cctttcattt CD 851 atactctaag cgcgattgct ataatatata cttccttgac cactttaaga CD 901 cagatcgatc ttaagaagat cattgcctac tcctcagtag cccatatgaa CD 951 tttggtgact attggtatgt ttagtcCgaa catacaggga attggaggta CD 1001 gcattttact tatgttaagt catggactgg tttcttcagc cctttttcta CD 1051 tgtgttggtg ttctatatga ccgacataag actcgacttg ttagatatta CD 1101 tggaggttta gtgagcacca tgccgaattt ctctaccatt ttcttctttt CD 1151 tcactttagc caatatgagt ttacccggca ctagcagctt tatcggggaa CD 1201 tttctaatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 acgtgcgctt gggatgattt taggcgcggc gtattccctg tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacccg atttcctcta taaattctcc CD 1351 gatctaaatg gcagagaagt ttCcatattt ctaccttttc ttgttggagt CD 1401 tgttCggatg ggtgttCacc ccaaagtgtt cCCggactgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggcaaat ttcattga FT EDITED CDNA CD 1 atgttagaac atttctgtga atgctatttc gatctaagtg gtcTtattct CD 51 ctgtcccgtg ctaggaagca ttaTtcTtct tttcattcca aattcttcaa CD 101 taagacTgat acgattgatt ggtctgtgcg tttctcttat tacttttttg CD 151 tatTcccTtg ttcTtTggat acaattcgat ccttctacgg ccaaatTtca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc catttgtata CD 251 tgggtataga cggtctttca ttattcttcg tgatattgac cacatttctg CD 301 atccctattt gcatttTagt gggttggtct ggtatgagaa gttttgggaa CD 351 agagtatatt aTagcatttc taattTgtga atttctaatg atcgccgtgt CD 401 Tctgcatgct ggatcTtcta ctattctatg ttTtttTcga aagcgtgcTa CD 451 atccctatgt tcatcattat aggggtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctatatac tttactggga tccgttttta CD 551 tgctattagc tattctgttg attcttctcc aaacaggaac caccgattta CD 601 caaattttat taaccactga atttagtgag cggcgccaaa tccttctatg CD 651 gattgctttt ttcgcctctt ttgccgtcaa agtgcctatg gtaccagttc CD 701 atatttggtt acccgaagcc catgtagagg cacctacggc tggatccgtc CD 751 atcttggctg gaattctttt aaaattggga acctacgggt ttttaagatt CD 801 ttccataccc atgtttcccg aggcgacact ttgtttcact cctttcattt CD 851 atactctaag cgcgattgct ataatatata cttccttgac cactttaaga CD 901 cagatcgatc ttaagaagat cattgcctac tcctcagtag cccatatgaa CD 951 tttggtgact attggtatgt ttagtcTgaa catacaggga attggaggta CD 1001 gcattttact tatgttaagt catggactgg tttcttcagc cctttttcta CD 1051 tgtgttggtg ttctatatga ccgacataag actcgacttg ttagatatta CD 1101 tggaggttta gtgagcacca tgccgaattt ctctaccatt ttcttctttt CD 1151 tcactttagc caatatgagt ttacccggca ctagcagctt tatcggggaa CD 1201 tttctaatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 acgtgcgctt gggatgattt taggcgcggc gtattccctg tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacccg atttcctcta taaattctcc CD 1351 gatctaaatg gcagagaagt ttTcatattt ctaccttttc ttgttggagt CD 1401 tgttTggatg ggtgttTacc ccaaagtgtt cTTggactgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggcaaat ttcattga SQ SEQUENCE 496 AA; MLEHFCECYF DLSGLILCPV LGSIILLFIP NSSIRLIRLI GLCVSLITFL YSLVLWIQFD PSTAKFQFVE SLRWLPYENI HLYMGIDGLS LFFVILTTFL IPICILVGWS GMRSFGKEYI IAFLICEFLM IAVFCMLDLL LFYVFFESVL IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SVFMLLAILL ILLQTGTTDL QILLTTEFSE RRQILLWIAF FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGILLKLG TYGFLRFSIP MFPEATLCFT PFIYTLSAIA IIYTSLTTLR QIDLKKIIAY SSVAHMNLVT IGMFSLNIQG IGGSILLMLS HGLVSSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNFSTI FFFFTLANMS LPGTSSFIGE FLILVGAFQR NSLVATLRAL GMILGAAYSL WLYNRVVSGN LKPDFLYKFS DLNGREVFIF LPFLVGVVWM GVYPKVFLDC MHTSVSNLVQ HGKFH* // ID X57283_1 STANDARD; PRT; 95 AA. AC X57283; DT Tue Jul 21 07:06:42 2009 DE P.hybrida mitochondrial rps19 gene for ribosomal protein S19. OS mitochondrion Petunia x hybrida OC Petunia x hybrida RN [1] RL Nucleic Acids Res. 19 (10), 2701-2705 (1991) RL PUBMED 2041746 FT Full length CDS FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA40551.1 FT PROTEIN_NAME : ribosomal protein S19 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 307 - 591 FT DIRECTIONS : positive FT EDITING : 5 S(tcC) -> S(tcT) FT EDITING : 39 S(tCg) -> L(tTg) FT EDITING : 46 S(tCC) -> F(tTT) FT EDITING : 55 P(CCt) -> F(TTt) FT EDITING : 74 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 285 NT; CD 1 atgccacgac gatcCatatg gaagggcagt tttgttgatg cattcctctt CD 51 gagaatgaag aagaagagag atcttctttt taacaggaaa atttggtcac CD 101 gtagatcttc tatttCgccg gaattcgttg attgctCCgt acgaatttac CD 151 aatggaaaaa ctCCtgttcg ttgtaagatt actgaaggaa aggttggtca CD 201 taaatttgga gagtttgctt Ctacacggaa acgaagacct tcgagaacaa CD 251 atattggacc gggaagaaaa agggggaaaa agtaa FT EDITED CDNA CD 1 atgccacgac gatcTatatg gaagggcagt tttgttgatg cattcctctt CD 51 gagaatgaag aagaagagag atcttctttt taacaggaaa atttggtcac CD 101 gtagatcttc tatttTgccg gaattcgttg attgctTTgt acgaatttac CD 151 aatggaaaaa ctTTtgttcg ttgtaagatt actgaaggaa aggttggtca CD 201 taaatttgga gagtttgctt Ttacacggaa acgaagacct tcgagaacaa CD 251 atattggacc gggaagaaaa agggggaaaa agtaa SQ SEQUENCE 95 AA; MPRRSIWKGS FVDAFLLRMK KKRDLLFNRK IWSRRSSILP EFVDCFVRIY NGKTFVRCKI TEGKVGHKFG EFAFTRKRRP SRTNIGPGRK RGKK* // ID X57968_1 STANDARD; PRT; 326 AA. AC X57968; DT Tue Jul 21 07:06:42 2009 DE Triticum aestivum mitochondrial nad1 gene, exon 1 (and joined CDS). OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Cell 65 (3), 465-472 (1991) RL PUBMED 1902143 FT Full length CDS FT GENE : nad1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAA41034.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 129/2 FT INTRON 157/0 FT INTRON 221/0 FT INTRON 240/2 FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 72 S(tCc) -> F(tTc) FT EDITING : 103 P(CCg) -> L(TTg) FT EDITING : 146 P(Cct) -> S(Tct) FT EDITING : 164 P(CcC) -> S(TcT) FT EDITING : 167 S(tCg) -> L(tTg) FT EDITING : 179 S(tCc) -> F(tTc) FT EDITING : 185 P(ccC) -> P(ccT) FT EDITING : 191 L(Ctt) -> F(Ttt) FT EDITING : 193 P(Cct) -> S(Tct) FT EDITING : 194 R(Cgt) -> C(Tgt) FT EDITING : 203 S(tCt) -> F(tTt) FT EDITING : 225 S(tCt) -> F(tTt) FT EDITING : 245 S(tCg) -> L(tTg) FT EDITING : 248 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 978 NT; CD 1 aCgtacatag ctgttccagc ggaaatactt tgtttaattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggtttgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctCccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgcttgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatCCga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga ataattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtcCctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtC cCtgtaattC CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtCcggt attcccttgt CD 551 tcccCgtatt ggttatgttc CttattCctC gtctagcaga aactaatcga CD 601 gctccgtCtg atctcccaga agcggaagct gaattagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtCtgctct ttttttttta ggagagtatg CD 701 ccaatatgat cttaatgagc ggtctatgca catCgctctt tcCaggaggt CD 751 tggctgccta tcctagatct tcccatttcc aaaaagatcc cttgttcgat CD 801 ctggtttagt atcaaggttc ttctttttct gtttctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtccccg tttcaggtgt CD 951 ttcagtcacc tttcgatggc tcccttaa FT EDITED CDNA CD 1 aTgtacatag ctgttccagc ggaaatactt tgtttaattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggtttgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctTccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgcttgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatTTga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga ataattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtcTctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtT cTtgtaattT CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtTcggt attcccttgt CD 551 tcccTgtatt ggttatgttc TttattTctT gtctagcaga aactaatcga CD 601 gctccgtTtg atctcccaga agcggaagct gaattagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtTtgctct ttttttttta ggagagtatg CD 701 ccaatatgat cttaatgagc ggtctatgca catTgctctt tcTaggaggt CD 751 tggctgccta tcctagatct tcccatttcc aaaaagatcc cttgttcgat CD 801 ctggtttagt atcaaggttc ttctttttct gtttctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggccgg CD 901 aaagtgttct tgcctctatc attagctcgg gtagtccccg tttcaggtgt CD 951 ttcagtcacc tttcgatggc tcccttaa SQ SEQUENCE 326 AA; MYIAVPAEIL CLILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGLKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVAWA VVPFDYGMVL SDLNIGLLYL FAISSLGVYG IIIAGWSSNS KYAFLGALRS AAQMVSYEVS IGLILITVLI CVGSCNLSEI VMAQKQIWFG IPLFPVLVMF FISCLAETNR APFDLPEAEA ELVAGYNVEY SSMGFALFFL GEYANMILMS GLCTLLFLGG WLPILDLPIS KKIPCSIWFS IKVLLFLFLY IWVRAAFPRY RYDQLMGLGR KVFLPLSLAR VVPVSGVSVT FRWLP* // ID X59153_1 STANDARD; PRT; 119 AA. AC X59153; DT Tue Jul 21 07:06:42 2009 DE Wheat mitochondrial nad3 gene, rps12 gene, ORF156 and COXII OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Plant Cell 3 (10), 1109-1120 (1991) RL PUBMED 1726558 FT Full length CDS FT GENE : nad3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA41864.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 31 - 387 FT DIRECTIONS : positive FT EDITING : 2 S(tCg) -> L(tTg) FT EDITING : 13 I(atC) -> I(atT) FT EDITING : 15 P(CCg) -> L(TTg) FT EDITING : 21 P(CCa) -> L(TTa) FT EDITING : 27 P(CCa) -> L(TTa) FT EDITING : 46 S(tCc) -> F(tTc) FT EDITING : 49 S(tCc) -> F(tTc) FT EDITING : 64 P(Cct) -> S(Tct) FT EDITING : 70 P(CCt) -> F(TTt) FT EDITING : 72 P(cCg) -> L(cTg) FT EDITING : 77 S(tCt) -> F(tTt) FT EDITING : 83 P(Cct) -> S(Tct) FT EDITING : 84 P(cCt) -> L(cTt) FT EDITING : 92 S(tCt) -> F(tTt) FT EDITING : 106 S(tCt) -> F(tTt) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 117 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 atgtCggaat ttgcacctat ttgtatctat ttagtgatCa gtCCgctagt CD 51 ttctttgatt CCactcggtg ttccttttCC atttgcttcc aatagttcga CD 101 cctatccaga aaaattgtcg gcctacgaat gtggttCcga tccctCcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatctggttC ctattttatt CD 201 tattatcCCt gatcCggaag tcaccttttC ttttccttgg gcagtaCctc CD 251 Ctaacaagat tgatctgttt ggatCttggt ccatgatggc ctttttattg CD 301 attttgacga ttggatCtct ctatgaatgg aaaaggggtg cttCggatCg CD 351 ggagtaa FT EDITED CDNA CD 1 atgtTggaat ttgcacctat ttgtatctat ttagtgatTa gtTTgctagt CD 51 ttctttgatt TTactcggtg ttccttttTT atttgcttcc aatagttcga CD 101 cctatccaga aaaattgtcg gcctacgaat gtggttTcga tccctTcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatctggttT ctattttatt CD 201 tattatcTTt gatcTggaag tcaccttttT ttttccttgg gcagtaTctc CD 251 Ttaacaagat tgatctgttt ggatTttggt ccatgatggc ctttttattg CD 301 attttgacga ttggatTtct ctatgaatgg aaaaggggtg cttTggatTg CD 351 ggagtaa SQ SEQUENCE 119 AA; MLEFAPICIY LVISLLVSLI LLGVPFLFAS NSSTYPEKLS AYECGFDPFG DARSRFDIRF YLVSILFIIF DLEVTFFFPW AVSLNKIDLF GFWSMMAFLL ILTIGFLYEW KRGALDWE* // ID X59153_2 STANDARD; PRT; 126 AA. AC X59153; DT Tue Jul 21 07:06:42 2009 DE Wheat mitochondrial nad3 gene, rps12 gene, ORF156 and COXII OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Plant Cell 3 (10), 1109-1120 (1991) RL PUBMED 1726558 FT Full length CDS FT GENE : rps12 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA41865.1 FT PROTEIN_NAME : ribosomal protein S12 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 432 - 809 FT DIRECTIONS : positive FT EDITING : 24 S(tCg) -> L(tTg) FT EDITING : 66 H(Cac) -> Y(Tac) FT EDITING : 74 S(tCg) -> L(tTg) FT EDITING : 90 S(tCg) -> L(tTg) FT EDITING : 95 S(tCc) -> F(tTc) FT EDITING : 97 R(Cgt) -> C(Tgt) FT CODON_START : 1 CL CDNALEN 378 NT; CD 1 atgcctacaa aaaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt Cggatcaatg tccccagaag caaggagtat CD 101 gcctgcgtgt ttcgacgaga acaccgaaaa aacctaattc agctctacgt CD 151 aagatagcaa aagtacggtt gagcaatcga catgatatat ttgctCacat CD 201 tccaggcgaa ggtcataatt Cgcaggaaca ttctatagtc ttagtcagag CD 251 gaggtagagt gaaagattCg ccaggtgtga aatCccatCg tattcgagga CD 301 gtcaaggatt tgctgggaat tccggatcgt agaaagggaa gatctaaata CD 351 tggtgcagaa agacctaaat cgaaatga FT EDITED CDNA CD 1 atgcctacaa aaaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt Tggatcaatg tccccagaag caaggagtat CD 101 gcctgcgtgt ttcgacgaga acaccgaaaa aacctaattc agctctacgt CD 151 aagatagcaa aagtacggtt gagcaatcga catgatatat ttgctTacat CD 201 tccaggcgaa ggtcataatt Tgcaggaaca ttctatagtc ttagtcagag CD 251 gaggtagagt gaaagattTg ccaggtgtga aatTccatTg tattcgagga CD 301 gtcaaggatt tgctgggaat tccggatcgt agaaagggaa gatctaaata CD 351 tggtgcagaa agacctaaat cgaaatga SQ SEQUENCE 126 AA; MPTKNQLIRH GREEKRRTDR TRALDQCPQK QGVCLRVSTR TPKKPNSALR KIAKVRLSNR HDIFAYIPGE GHNLQEHSIV LVRGGRVKDL PGVKFHCIRG VKDLLGIPDR RKGRSKYGAE RPKSK* // ID X59153_3 STANDARD; PRT; 65 AA. AC X59153; DT Tue Jul 21 07:06:42 2009 DE Wheat mitochondrial nad3 gene, rps12 gene, ORF156 and COXII OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Plant Cell 3 (10), 1109-1120 (1991) RL PUBMED 1726558 FT Full length CDS FT pseudo-gene FT GENE : COXII FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1129 - 1321 FT DIRECTIONS : positive FT EDITING : 17 S(tCa) -> L(tTa) FT EDITING : 18 R(Cgg) -> W(Tgg) FT EDITING : 48 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 193 NT; CD 1 ttacatcacg atatcttttt cttcctcatt cttattttgg ttttcgtatC CD 51 aCggatgttg gttcgcgctt tatggcattt caacgagcaa actaatccaa CD 101 tcccacaaag gattgttcat ggaactacta tcgaaattat tCggaccata CD 151 tttccaagtg tcattctttt gttcattgct ataccatcgt ttg FT EDITED CDNA CD 1 ttacatcacg atatcttttt cttcctcatt cttattttgg ttttcgtatT CD 51 aTggatgttg gttcgcgctt tatggcattt caacgagcaa actaatccaa CD 101 tcccacaaag gattgttcat ggaactacta tcgaaattat tTggaccata CD 151 tttccaagtg tcattctttt gttcattgct ataccatcgt ttg SQ SEQUENCE 65 AA; LHHDIFFFLI LILVFVLWML VRALWHFNEQ TNPIPQRIVH GTTIEIIWTI FPSVILLFIA IPSFX // ID X59153_4 STANDARD; PRT; 157 AA. AC X59153; DT Tue Jul 21 07:06:42 2009 DE Wheat mitochondrial nad3 gene, rps12 gene, ORF156 and COXII OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Plant Cell 3 (10), 1109-1120 (1991) RL PUBMED 1726558 FT Full length CDS FT GENE : orf156 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA41867.1 FT PROTEIN_NAME : 18kDA membrane bound protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2132 - 2602 FT DIRECTIONS : positive FT EDITING : 20 L(Ctc) -> F(Ttc) FT EDITING : 41 L(ctC) -> L(ctT) FT EDITING : 67 S(tCg) -> L(tTg) FT EDITING : 148 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 471 NT; CD 1 atgcctcaac ttgataaatt aacttatttc tcacaattct tctggttatg CD 51 tcttctcCtc tttacttttt atattctctt atttaataat aataatggaa CD 101 tacttggaat tagtagaatt ctCaaactac ggaaccaact gctttcgcac CD 151 cgggggggcg agatccggag caaggaccct aagaatctgg aagatatctC CD 201 gagaaaaggt tttagcaccg gtctctcata tatgtactcc agtttatccg CD 251 aagtatccca atggtgtaag accgtcgact atttgggaaa aaggaggaaa CD 301 atcactctga tctctgattt cggagaaata agtggctcac gaggaatgga CD 351 gagacagatt ctctatttga tctcgaagtc ctcatataac acttcttcca CD 401 gtcggatcac ttgttggaaa aacataatgc tcacacatgt tcCacacggg CD 451 caaggaagca taatatcatg a FT EDITED CDNA CD 1 atgcctcaac ttgataaatt aacttatttc tcacaattct tctggttatg CD 51 tcttctcTtc tttacttttt atattctctt atttaataat aataatggaa CD 101 tacttggaat tagtagaatt ctTaaactac ggaaccaact gctttcgcac CD 151 cgggggggcg agatccggag caaggaccct aagaatctgg aagatatctT CD 201 gagaaaaggt tttagcaccg gtctctcata tatgtactcc agtttatccg CD 251 aagtatccca atggtgtaag accgtcgact atttgggaaa aaggaggaaa CD 301 atcactctga tctctgattt cggagaaata agtggctcac gaggaatgga CD 351 gagacagatt ctctatttga tctcgaagtc ctcatataac acttcttcca CD 401 gtcggatcac ttgttggaaa aacataatgc tcacacatgt tcTacacggg CD 451 caaggaagca taatatcatg a SQ SEQUENCE 157 AA; MPQLDKLTYF SQFFWLCLLF FTFYILLFNN NNGILGISRI LKLRNQLLSH RGGEIRSKDP KNLEDILRKG FSTGLSYMYS SLSEVSQWCK TVDYLGKRRK ITLISDFGEI SGSRGMERQI LYLISKSSYN TSSSRITCWK NIMLTHVLHG QGSIIS* // ID X60046_1 STANDARD; PRT; 296 AA. AC X60046; DT Tue Jul 21 07:06:42 2009 DE O.berteriana mitochondrial nad5 gene for NADH dehydrogenase subunit OS mitochondrion Oenothera berteroana OC Oenothera berteroana RN [1] RL EMBO J. 10 (11), 3483-3493 (1991) RL PUBMED 1915303 FT Full length CDS FT GENE : nad5 FT NOTE : unnamed protein product; orfx FT LOCUS_TAG : FT PROTEIN_ID : CAA42649.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1191 - 2078 FT DIRECTIONS : positive FT EDITING : 44 S(tCg) -> L(tTg) FT EDITING : 57 R(Cgg) -> W(Tgg) FT EDITING : 69 R(Cgt) -> C(Tgt) FT EDITING : 72 F(ttC) -> F(ttT) FT EDITING : 73 P(Ccg) -> S(Tcg) FT EDITING : 78 S(tCt) -> F(tTt) FT EDITING : 98 S(tCa) -> L(tTa) FT EDITING : 102 S(tCc) -> F(tTc) FT EDITING : 103 P(Ccg) -> S(Tcg) FT EDITING : 123 H(Cat) -> Y(Tat) FT EDITING : 153 S(tcC) -> S(tcT) FT EDITING : 160 P(cCt) -> L(cTt) FT EDITING : 201 S(tCg) -> L(tTg) FT EDITING : 202 F(ttC) -> F(ttT) FT EDITING : 220 P(cCt) -> L(cTt) FT EDITING : 255 I(atC) -> I(atT) FT EDITING : 258 R(Cgt) -> C(Tgt) FT EDITING : 273 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 888 NT; CD 1 atgatcaagg tgcggggaga cattttattg accggtcgct attacggggg CD 51 tgttatagaa ttaaaactct cttttcttac cttctgtcct ttgaattact CD 101 cctatatatc ctcaaaattt gattttgcat Cggaaactat tctagaagaa CD 151 gttcgaatcc gttccgttCg gatattgatc ggtcttggtt tgacatggtt CD 201 tacgCgttac tggttCCcgg aagagttcat ttCtctatta gctaaaccct CD 251 ttcttagctt gcctttggac tcgtattttg tttgtacaca atCaacggag CD 301 gcctCcCcga catatgttgc aacgtcttca atagcatgct cttacttcgt CD 351 cttccctttt ataagtCatc aaatttggtg ctttttgatc cccagttgct CD 401 atggggaaca aaggacgaaa tacaatcgat tcttccattt aagtggttct CD 451 cgcttttcCt tgttcctgtt cctaactcCt ccccgggtag ttcccaatgt CD 501 ttggcacttt ccatacttcg tgggtgcaac atcaacaaat tcgctcatga CD 551 tcaagttaca acctaagatc tatgaccata ttatgttaac tgttcgtatt CD 601 tCgttCattc catcggtatg ctccctggta cctgtaattt tgatctgttt CD 651 gccagaacCt aggggtcttt ctgtggaaac cttcacgaac aatcgtcgtt CD 701 ttttgatggt tttttcgctt ctcacagctg ctctttccac acctccggat CD 751 atctggtgcc aaatCgtcgc cCgtttcctt atttctttga taatagagtt CD 801 ggctatcttt gtggcatCga ttgtacaagt tcgtgaggag ggctggacga CD 851 gtggaatgag ggagagcgga tcgactcgac tgatatga FT EDITED CDNA CD 1 atgatcaagg tgcggggaga cattttattg accggtcgct attacggggg CD 51 tgttatagaa ttaaaactct cttttcttac cttctgtcct ttgaattact CD 101 cctatatatc ctcaaaattt gattttgcat Tggaaactat tctagaagaa CD 151 gttcgaatcc gttccgttTg gatattgatc ggtcttggtt tgacatggtt CD 201 tacgTgttac tggttTTcgg aagagttcat ttTtctatta gctaaaccct CD 251 ttcttagctt gcctttggac tcgtattttg tttgtacaca atTaacggag CD 301 gcctTcTcga catatgttgc aacgtcttca atagcatgct cttacttcgt CD 351 cttccctttt ataagtTatc aaatttggtg ctttttgatc cccagttgct CD 401 atggggaaca aaggacgaaa tacaatcgat tcttccattt aagtggttct CD 451 cgcttttcTt tgttcctgtt cctaactcTt ccccgggtag ttcccaatgt CD 501 ttggcacttt ccatacttcg tgggtgcaac atcaacaaat tcgctcatga CD 551 tcaagttaca acctaagatc tatgaccata ttatgttaac tgttcgtatt CD 601 tTgttTattc catcggtatg ctccctggta cctgtaattt tgatctgttt CD 651 gccagaacTt aggggtcttt ctgtggaaac cttcacgaac aatcgtcgtt CD 701 ttttgatggt tttttcgctt ctcacagctg ctctttccac acctccggat CD 751 atctggtgcc aaatTgtcgc cTgtttcctt atttctttga taatagagtt CD 801 ggctatcttt gtggcatTga ttgtacaagt tcgtgaggag ggctggacga CD 851 gtggaatgag ggagagcgga tcgactcgac tgatatga SQ SEQUENCE 296 AA; MIKVRGDILL TGRYYGGVIE LKLSFLTFCP LNYSYISSKF DFALETILEE VRIRSVWILI GLGLTWFTCY WFSEEFIFLL AKPFLSLPLD SYFVCTQLTE AFSTYVATSS IACSYFVFPF ISYQIWCFLI PSCYGEQRTK YNRFFHLSGS RFSLFLFLTL PRVVPNVWHF PYFVGATSTN SLMIKLQPKI YDHIMLTVRI LFIPSVCSLV PVILICLPEL RGLSVETFTN NRRFLMVFSL LTAALSTPPD IWCQIVACFL ISLIIELAIF VALIVQVREE GWTSGMRESG STRLI* // ID X60400_1 STANDARD; PRT; 326 AA. AC X60400; DT Tue Jul 21 07:06:42 2009 DE Petunia mitochondrial nad1 gene for NADH dehydrogenase subunit 1, OS mitochondrion Petunia x hybrida OC Petunia x hybrida RN [1] RL Genes Dev. 5 (8), 1407-1415 (1991) RL PUBMED 1869047 FT Full length CDS FT GENE : nad1 FT NOTE : RNA editing, various c to u transitions, see single FT LOCUS_TAG : FT PROTEIN_ID : CAA42946.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT INTRON 130/0 FT INTRON 157/0 FT INTRON 221/0 FT INTRON 240/2 FT EDITING : 72 S(tCc) -> F(tTc) FT EDITING : 89 R(Cgg) -> W(Tgg) FT EDITING : 103 P(CCg) -> L(TTg) FT EDITING : 145 V(gtC) -> V(gtT) FT EDITING : 164 S(tcC) -> S(tcT) FT EDITING : 165 R(Cgt) -> C(Tgt) FT EDITING : 167 S(tCg) -> L(tTg) FT EDITING : 179 S(tCC) -> F(tTT) FT EDITING : 190 F(ttC) -> F(ttT) FT EDITING : 194 R(Cgt) -> C(Tgt) FT EDITING : 212 S(tCa) -> L(tTa) FT EDITING : 225 S(tCt) -> F(tTt) FT EDITING : 228 S(tCt) -> F(tTt) FT EDITING : 247 S(tCt) -> F(tTt) FT EDITING : 248 P(cCa) -> L(cTa) FT EDITING : 252 P(cCg) -> L(cTg) FT EDITING : 260 S(tCc) -> F(tTc) FT EDITING : 275 L(Ctt) -> F(Ttt) FT EDITING : 279 L(Cta) -> L(Tta) FT EDITING : 300 R(Cgg) -> W(Tgg) FT EDITING : 303 F(ttC) -> F(ttT) FT EDITING : 306 L(Cta) -> L(Tta) FT EDITING : 310 R(Cgg) -> W(Tgg) FT EDITING : 313 P(Ccc) -> S(Tcc) FT CODON_START : 1 CL CDNALEN 978 NT; CD 1 atgtacatag ctgttccagc tgaaatactt ggaataattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgtttgg attgttacaa CD 151 cctctagcag atggtttgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctCccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgctCgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatCCga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga attattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtCcctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtt cCCgtaattC CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtCCggt attcccttgt CD 551 tccctgtatt ggttatgttC tttatatctC gtctagcaga aactaatcga CD 601 gctccgtttg atctcccaga agcggaagct gaatCagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtCtgctct ttCttttttg ggagagtatg CD 701 ccaatatgat cttaatgagt ggtctatgca catcgctctC tcCaggaggt CD 751 tggcCgccta tcctagatct tcccatttCc aagaagatcc cgggctcgat CD 801 ctggtttagt atcaaggtga ttCtttttct gttcCtatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggcCgg CD 901 aaagtgttCt tgcctCtatc attagctCgg gtagtcCccg tttctggtgt CD 951 tttagtcacc tttcaatggc tcccttaa FT EDITED CDNA CD 1 atgtacatag ctgttccagc tgaaatactt ggaataattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtcg aaagggtcct gatgtagtgg gatcgtttgg attgttacaa CD 151 cctctagcag atggtttgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat ttctTccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgctTgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatTTga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga attattatag caggttggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtTcctta tgaagtctct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtt cTTgtaattT CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtTTggt attcccttgt CD 551 tccctgtatt ggttatgttT tttatatctT gtctagcaga aactaatcga CD 601 gctccgtttg atctcccaga agcggaagct gaatTagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtTtgctct ttTttttttg ggagagtatg CD 701 ccaatatgat cttaatgagt ggtctatgca catcgctctT tcTaggaggt CD 751 tggcTgccta tcctagatct tcccatttTc aagaagatcc cgggctcgat CD 801 ctggtttagt atcaaggtga ttTtttttct gttcTtatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggcTgg CD 901 aaagtgttTt tgcctTtatc attagctTgg gtagtcTccg tttctggtgt CD 951 tttagtcacc tttcaatggc tcccttaa SQ SEQUENCE 326 AA; MYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGLKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVAWA VVPFDYGMVL SDLNIGLLYL FAISSLGVYG IIIAGWSSNS KYAFLGALRS AAQMVPYEVS IGLILITVLI CVGSCNLSEI VMAQKQIWFG IPLFPVLVMF FISCLAETNR APFDLPEAEA ELVAGYNVEY SSMGFALFFL GEYANMILMS GLCTSLFLGG WLPILDLPIF KKIPGSIWFS IKVIFFLFLY IWVRAAFPRY RYDQLMGLGW KVFLPLSLAW VVSVSGVLVT FQWLP* // ID X61030_1 STANDARD; PRT; 95 AA. AC X61030; DT Tue Jul 21 07:06:42 2009 DE O.berteriana mitochondrion rps19 and rps3 (exon 1) genes for OS mitochondrion Oenothera berteroana OC Oenothera berteroana RN [1] RL Nucleic Acids Res. 19 (24), 6923-6928 (1991) RL PUBMED 1762921 FT Full length CDS FT pseudo-gene FT GENE : rps19 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : FT PROTEIN_NAME : ribosomal protein S19 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 265 - 549 FT DIRECTIONS : positive FT EDITING : 33 S(tCa) -> L(tTa) FT EDITING : 36 S(tCt) -> F(tTt) FT EDITING : 40 P(cCg) -> L(cTg) FT EDITING : 42 F(ttC) -> F(ttT) FT EDITING : 46 S(tcC) -> S(tcT) FT EDITING : 80 R(Cgt) -> C(Tgt) FT EDITING : 87 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 285 NT; CD 1 atgccacgac gatctatatg gaagggcagt tttgttgatg cattcctgtt CD 51 gagaatgaag aagaagagag atcttctttt gaacaggaaa atttggtCac CD 101 gtagatCttc tattttgcCg gaattCgtta attgctcCgt acgaatttac CD 151 aatggaaaaa ctcctgttcg ttgtaagatc actgaagaaa aggttggtca CD 201 taaattttga gagtttgctt ttacacggaa acgaagaCgt tcgagaacaa CD 251 atattggatC gggaagaaaa agggggaaaa agtaa FT EDITED CDNA CD 1 atgccacgac gatctatatg gaagggcagt tttgttgatg cattcctgtt CD 51 gagaatgaag aagaagagag atcttctttt gaacaggaaa atttggtTac CD 101 gtagatTttc tattttgcTg gaattTgtta attgctcTgt acgaatttac CD 151 aatggaaaaa ctcctgttcg ttgtaagatc actgaagaaa aggttggtca CD 201 taaattttga gagtttgctt ttacacggaa acgaagaTgt tcgagaacaa CD 251 atattggatT gggaagaaaa agggggaaaa agtaa SQ SEQUENCE 95 AA; MPRRSIWKGS FVDAFLLRMK KKRDLLLNRK IWLRRFSILL EFVNCSVRIY NGKTPVRCKI TEEKVGHKF* EFAFTRKRRC SRTNIGLGRK RGKK* // ID X61030_2 STANDARD; PRT; 25 AA. AC X61030; DT Tue Jul 21 07:06:42 2009 DE O.berteriana mitochondrion rps19 and rps3 (exon 1) genes for OS mitochondrion Oenothera berteroana OC Oenothera berteroana RN [1] RL Nucleic Acids Res. 19 (24), 6923-6928 (1991) RL PUBMED 1762921 FT C-terminal not determined FT GENE : rps3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA43365.1 FT PROTEIN_NAME : ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 563 - 636 FT DIRECTIONS : positive FT EDITING : 3 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 74 NT; CD 1 atggcaCgaa aaggaaatcc gatttcggta agacttgatc tgaatcgtag CD 51 ttcagattca agttggttca gtga FT EDITED CDNA CD 1 atggcaTgaa aaggaaatcc gatttcggta agacttgatc tgaatcgtag CD 51 ttcagattca agttggttca gtga SQ SEQUENCE 25 AA; MA*KGNPISV RLDLNRSSDS SWFSX // ID X62070_2 STANDARD; PRT; 150 AA. AC X62070; DT Tue Jul 21 07:06:42 2009 DE Zea mays chloroplast mRNA for large ribosomal protein 2 (rpl2 OS chloroplast Zea mays OC Zea mays RN [1] RL Nature 353 (6340), 178-180 (1991) RL PUBMED 1653905 FT C-terminal not determined FT GENE : rpl2 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAA43983.1 FT PROTEIN_NAME : large ribosomal protein 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 61 - 510 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 450 NT; CD 1 aCggcgaaac atttatacaa aacacctatc ccgagcacac gcaagggaac CD 51 cgtagacagg caagtgaaat ccaatccacg aaataaattg atccatggac CD 101 ggcaccgttg tggtaaaggt cgtaatgcca gaggaatcat taccgcaagg CD 151 catagagggg gaggtcataa gcgcctatac cgtaaaatcg attttcgacg CD 201 gaatcaaaaa gacatatctg gtagaatcat aaccatagaa tacgacccta CD 251 atcgaaatgc atacatttgt ctcatacact atggggatgg tgagaagaga CD 301 tatattttac atcccagagg ggctataatt ggagatacta ttgtttctgg CD 351 tacaaaagtt cctatatcaa tgggaaatgc cctacctttg accgatatgc CD 401 ccttaggcac ggccatacat aacatagaaa tcacacgtgg aaggggtggg FT EDITED CDNA CD 1 aTggcgaaac atttatacaa aacacctatc ccgagcacac gcaagggaac CD 51 cgtagacagg caagtgaaat ccaatccacg aaataaattg atccatggac CD 101 ggcaccgttg tggtaaaggt cgtaatgcca gaggaatcat taccgcaagg CD 151 catagagggg gaggtcataa gcgcctatac cgtaaaatcg attttcgacg CD 201 gaatcaaaaa gacatatctg gtagaatcat aaccatagaa tacgacccta CD 251 atcgaaatgc atacatttgt ctcatacact atggggatgg tgagaagaga CD 301 tatattttac atcccagagg ggctataatt ggagatacta ttgtttctgg CD 351 tacaaaagtt cctatatcaa tgggaaatgc cctacctttg accgatatgc CD 401 ccttaggcac ggccatacat aacatagaaa tcacacgtgg aaggggtggg SQ SEQUENCE 150 AA; MAKHLYKTPI PSTRKGTVDR QVKSNPRNKL IHGRHRCGKG RNARGIITAR HRGGGHKRLY RKIDFRRNQK DISGRIITIE YDPNRNAYIC LIHYGDGEKR YILHPRGAII GDTIVSGTKV PISMGNALPL TDMPLGTAIH NIEITRGRGG // ID X62424_1 STANDARD; PRT; 171 AA. AC X62424; DT Tue Jul 21 07:06:42 2009 DE Z.mays plastid mRNA for ORF170. OS plastid Zea mays OC Zea mays RN [1] RL Unpublished FT Full length CDS FT GENE : FT NOTE : unnamed protein product; ORF170 FT LOCUS_TAG : FT PROTEIN_ID : CAA44290.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 9 - 521 FT DIRECTIONS : positive FT EDITING : 15 S(tCc) -> F(tTc) FT EDITING : 62 M(aTg) -> T(aCg) FT CODON_START : 1 CL CDNALEN 513 NT; CD 1 atgcctagat cccgtataaa tggaaatttc attgataaga cctCcttgat CD 51 tgtagccaat attttattgc aaataattcc gacaacctcc ggggaaaaaa CD 101 gggcatttac ttattataga gatgggatgt tggctcaatc cgaaggaaat CD 151 tatgcggaag ctttgcagaa ttattatgaa gctaTgcgac tagaaattga CD 201 tccctatgat cgaagttata tactatataa cataggcctt atacacacaa CD 251 gcaatggaga gcatacaaag gctttggaat attatttccg ggcgctagaa CD 301 cgaaacccct tcttaccgca agcttttaat aatatggccg tgatctgtca CD 351 ttaccgagga gaacaggcca ttctacaggg cgattcggaa attgcggaag CD 401 cttggtttga tcaagctgct gagtattgga aacaagctat agcgcttact CD 451 ccaggaaatt atattgaagc acagaactgg ttaaagatta cgaagcgctt CD 501 tgaatttgaa taa FT EDITED CDNA CD 1 atgcctagat cccgtataaa tggaaatttc attgataaga cctTcttgat CD 51 tgtagccaat attttattgc aaataattcc gacaacctcc ggggaaaaaa CD 101 gggcatttac ttattataga gatgggatgt tggctcaatc cgaaggaaat CD 151 tatgcggaag ctttgcagaa ttattatgaa gctaCgcgac tagaaattga CD 201 tccctatgat cgaagttata tactatataa cataggcctt atacacacaa CD 251 gcaatggaga gcatacaaag gctttggaat attatttccg ggcgctagaa CD 301 cgaaacccct tcttaccgca agcttttaat aatatggccg tgatctgtca CD 351 ttaccgagga gaacaggcca ttctacaggg cgattcggaa attgcggaag CD 401 cttggtttga tcaagctgct gagtattgga aacaagctat agcgcttact CD 451 ccaggaaatt atattgaagc acagaactgg ttaaagatta cgaagcgctt CD 501 tgaatttgaa taa SQ SEQUENCE 171 AA; MPRSRINGNF IDKTFLIVAN ILLQIIPTTS GEKRAFTYYR DGMLAQSEGN YAEALQNYYE ATRLEIDPYD RSYILYNIGL IHTSNGEHTK ALEYYFRALE RNPFLPQAFN NMAVICHYRG EQAILQGDSE IAEAWFDQAA EYWKQAIALT PGNYIEAQNW LKITKRFEFE * // ID X63206_1 STANDARD; PRT; 39 AA. AC X63206; DT Tue Jul 21 07:06:42 2009 DE A.majus psbL chloroplast gene. OS chloroplast Antirrhinum majus (snapdragon) OC Antirrhinum majus RN [1] RL EMBO J. 11 (3), 1099-1103 (1992) RL PUBMED 1547774 FT Full length CDS FT GENE : psbL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA44889.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 27 - 143 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaagt gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttttt caattag FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaagt gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttttt caattag SQ SEQUENCE 39 AA; MTQSNPNEQS VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID X64423_1 STANDARD; PRT; 75 AA. AC X64423; DT Tue Jul 21 07:06:42 2009 DE N.tabacum mitochondrial F0-ATPase subunit 9 edited mRNA. OS mitochondrion Nicotiana tabacum (common tobacco) OC Nicotiana tabacum RN [1] RL Nucleic Acids Res. 20 (7), 1809 (1992) RL PUBMED 1533714 FT Full length CDS FT GENE : atp9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA45770.1 FT PROTEIN_NAME : ATPase subunit 9 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 225 FT DIRECTIONS : positive FT EDITING : 7 S(tCa) -> L(tTa) FT EDITING : 17 S(tCa) -> L(tTa) FT EDITING : 27 V(gtC) -> V(gtT) FT EDITING : 28 L(Ctt) -> F(Ttt) FT EDITING : 30 S(tcC) -> S(tcT) FT EDITING : 31 S(tCg) -> L(tTg) FT EDITING : 61 S(tCg) -> L(tTg) FT EDITING : 64 P(cCa) -> L(cTa) FT EDITING : 71 S(tCa) -> L(tTa) FT EDITING : 75 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gtgcaaaatC aatgggtgca ggagctgcta caattgcttC CD 51 agcgggagct gctatcggta ttggaaacgt CCttagttcC tCgattcatt CD 101 ccgtggcgcg aaatccatca ttggcaaaac aattatttgg ttatgccatt CD 151 ttgggctttg ctctaaccga agctattgca tCgtttgccc Caatgatggc CD 201 ctttttgatc tCattcgtat tcCaa FT EDITED CDNA CD 1 atgttagaag gtgcaaaatT aatgggtgca ggagctgcta caattgcttT CD 51 agcgggagct gctatcggta ttggaaacgt TTttagttcT tTgattcatt CD 101 ccgtggcgcg aaatccatca ttggcaaaac aattatttgg ttatgccatt CD 151 ttgggctttg ctctaaccga agctattgca tTgtttgccc Taatgatggc CD 201 ctttttgatc tTattcgtat tcTaa SQ SEQUENCE 75 AA; MLEGAKLMGA GAATIALAGA AIGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI LFVF* // ID X64833_1 STANDARD; PRT; 237 AA. AC X64833; DT Tue Jul 21 07:06:42 2009 DE T.plicata mitochondrial coxI mRNA for cytochrome oxidase subunit I. OS mitochondrion Thuja plicata (giant arborvitae) OC Thuja plicata RN [1] RL Curr. Genet. 22 (2), 163-165 (1992) RL PUBMED 1384996 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : internal fragment FT LOCUS_TAG : FT PROTEIN_ID : CAA46045.1 FT PROTEIN_NAME : cytochrome-c oxidase subunit I FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 712 FT DIRECTIONS : positive FT EDITING : 7 S(tCa) -> L(tTa) FT EDITING : 17 L(Ctt) -> F(Ttt) FT EDITING : 32 P(cCc) -> L(cTc) FT EDITING : 33 P(CCt) -> F(TTt) FT EDITING : 46 P(cCg) -> L(cTg) FT EDITING : 60 P(Ccg) -> S(Tcg) FT EDITING : 89 T(aCg) -> M(aTg) FT EDITING : 94 P(cCa) -> L(cTa) FT EDITING : 101 H(CaC) -> Y(TaT) FT EDITING : 102 S(tCt) -> F(tTt) FT EDITING : 109 T(aCa) -> I(aTa) FT EDITING : 136 P(cCa) -> L(cTa) FT EDITING : 137 S(tCt) -> F(tTt) FT EDITING : 141 S(tCc) -> F(tTc) FT EDITING : 143 L(Ctt) -> F(Ttt) FT EDITING : 145 S(tCc) -> F(tTc) FT EDITING : 164 P(cCg) -> L(cTg) FT EDITING : 168 H(Cat) -> Y(Tat) FT EDITING : 174 S(tCc) -> F(tTc) FT EDITING : 179 P(Ccc) -> S(Tcc) FT EDITING : 193 R(Cgg) -> W(Tgg) FT EDITING : 212 R(Cgg) -> W(Tgg) FT EDITING : 222 P(CCc) -> F(TTc) FT CODON_START : 2 CL CDNALEN 712 NT; CD 1 agcaggggca attaccatgt Cattaaccga tcgaagcttt aatacaaccC CD 51 ttttcgatcc tgctggaggg ggagacccga tcttatacca gcatcCcCCt CD 101 tggttcttcg gccatccaga ggtgtatatt ttgattcCgc ctggattcgg CD 151 tatcatcagt catatcgtat cgacttttCc gggaaaaccg gtcttcgggt CD 201 atctgggcat ggtttatgcc atgataagta ttggtgttct tggattcctt CD 251 gtttgggctc atcataCgtt tactgtgggc cCagacgttg atacgcgtgc CD 301 tCaCtCtacc gcagctacca tgatcaCagc tgtccccact ggaatcaaaa CD 351 tctttagttg gatcgctacc atgtggggag gttcgatacg atacaaaaca CD 401 cctatgcCat Ctgctgtagg gtCcatcCtt ctgtCcacca taggaggact CD 451 tactggaata gtcctggcga attccgggct agacattgct cCgcatgata CD 501 ctCattacgt ggttgcacat tCccattatg tacttCccat gggagccgtt CD 551 ttcgctttat tcgcaggatt ttacttcCgg gtggggaaga tctctggtcg CD 601 aacatacccc gaaactttag gtcaaattca ttttCggatc actttcgtcg CD 651 gggtgaattt gaccCCcttt cccatgcatt tcttggggct ttcgggtatg CD 701 ccacgtcgca tt FT EDITED CDNA CD 1 agcaggggca attaccatgt Tattaaccga tcgaagcttt aatacaaccT CD 51 ttttcgatcc tgctggaggg ggagacccga tcttatacca gcatcTcTTt CD 101 tggttcttcg gccatccaga ggtgtatatt ttgattcTgc ctggattcgg CD 151 tatcatcagt catatcgtat cgacttttTc gggaaaaccg gtcttcgggt CD 201 atctgggcat ggtttatgcc atgataagta ttggtgttct tggattcctt CD 251 gtttgggctc atcataTgtt tactgtgggc cTagacgttg atacgcgtgc CD 301 tTaTtTtacc gcagctacca tgatcaTagc tgtccccact ggaatcaaaa CD 351 tctttagttg gatcgctacc atgtggggag gttcgatacg atacaaaaca CD 401 cctatgcTat Ttgctgtagg gtTcatcTtt ctgtTcacca taggaggact CD 451 tactggaata gtcctggcga attccgggct agacattgct cTgcatgata CD 501 ctTattacgt ggttgcacat tTccattatg tacttTccat gggagccgtt CD 551 ttcgctttat tcgcaggatt ttacttcTgg gtggggaaga tctctggtcg CD 601 aacatacccc gaaactttag gtcaaattca ttttTggatc actttcgtcg CD 651 gggtgaattt gaccTTcttt cccatgcatt tcttggggct ttcgggtatg CD 701 ccacgtcgca tt SQ SEQUENCE 237 AA; AGAITMLLTD RSFNTTFFDP AGGGDPILYQ HLFWFFGHPE VYILILPGFG IISHIVSTFS GKPVFGYLGM VYAMISIGVL GFLVWAHHMF TVGLDVDTRA YFTAATMIIA VPTGIKIFSW IATMWGGSIR YKTPMLFAVG FIFLFTIGGL TGIVLANSGL DIALHDTYYV VAHFHYVLSM GAVFALFAGF YFWVGKISGR TYPETLGQIH FWITFVGVNL TFFPMHFLGL SGMPRRI // ID X65123_2 STANDARD; PRT; 101 AA. AC X65123; DT Tue Jul 21 07:06:42 2009 DE A.thaliana mitochondrial rps14 gene for ribosomal protein S14. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Plant Mol. Biol. 20 (6), 1169-1174 (1992) RL PUBMED 1463850 FT Full length CDS FT pseudo-gene FT GENE : rps14 FT NOTE : Pseudogene of gene for ribosomal protein S14 FT LOCUS_TAG : FT PROTEIN_ID : FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 287 - 588 FT DIRECTIONS : positive FT EDITING : 10 H(caC) -> H(caT) FT EDITING : 33 P(ccC) -> P(ccT) FT EDITING : 65 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 302 NT; CD 1 atgtcgtaga agcaaaatag tagagatcaC aaacgtagat tgctcgcggc CD 51 taaatttgaa ttgagacgaa agctttataa agccttttgt aaagatccCg CD 101 atcttcctag tgatatgcgg gacaaacatt gttataagtt gtccaagttg CD 151 ccaagaaata gttcctttgc acgagtcaga aaccgatgta tttCcacggt CD 201 cgccctcgtt ctgtatctga gttctttcga atttctcgta tcgtttttcg CD 251 tggattagca tctcgaggtt ctttgatggg cataaataaa tcgtcttggt CD 301 ag FT EDITED CDNA CD 1 atgtcgtaga agcaaaatag tagagatcaT aaacgtagat tgctcgcggc CD 51 taaatttgaa ttgagacgaa agctttataa agccttttgt aaagatccTg CD 101 atcttcctag tgatatgcgg gacaaacatt gttataagtt gtccaagttg CD 151 ccaagaaata gttcctttgc acgagtcaga aaccgatgta tttTcacggt CD 201 cgccctcgtt ctgtatctga gttctttcga atttctcgta tcgtttttcg CD 251 tggattagca tctcgaggtt ctttgatggg cataaataaa tcgtcttggt CD 301 ag SQ SEQUENCE 101 AA; MS*KQNSRDH KRRLLAAKFE LRRKLYKAFC KDPDLPSDMR DKHCYKLSKL PRNSSFARVR NRCIFTVALV LYLSSFEFLV SFFVD*HLEV L*WA*INRLG X // ID X65570_2 STANDARD; PRT; 39 AA. AC X65570; DT Tue Jul 21 07:06:42 2009 DE C.annuum chloroplast DNA for genes psbL and 3'end of psbF. OS chloroplast Capsicum annuum OC Capsicum annuum RN [1] RL Plant Mol. Biol. 20 (6), 1185-1188 (1992) RL PUBMED 1463853 FT Full length CDS FT GENE : psbL FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAA46540.1 FT PROTEIN_NAME : 3.2kDa polypeptide from photosystem II FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 58 - 174 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattaa SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID X69140_1 STANDARD; PRT; 24 AA. AC X69140; DT Tue Jul 21 07:06:42 2009 DE O.berteriana mitochondrion DNA for ribosomal proteins S3 and L16. OS mitochondrion Oenothera berteroana OC Oenothera berteroana RN [1] RL Nucleic Acids Res. 19 (24), 6923-6928 (1991) RL PUBMED 1762921 FT N-terminal not determined FT GENE : rps19 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA48893.1 FT PROTEIN_NAME : ribosomal protein S19 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 72 FT DIRECTIONS : positive FT EDITING : 9 R(Cgt) -> C(Tgt) FT EDITING : 16 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 72 NT; CD 1 tttgctttta cacggaaacg aagaCgttcg agaacaaata ttggatCggg CD 51 aagaaaaagg gggaaaaagt aa FT EDITED CDNA CD 1 tttgctttta cacggaaacg aagaTgttcg agaacaaata ttggatTggg CD 51 aagaaaaagg gggaaaaagt aa SQ SEQUENCE 24 AA; FAFTRKRRCS RTNIGLGRKR GKK* // ID X69140_2 STANDARD; PRT; 551 AA. AC X69140; DT Tue Jul 21 07:06:42 2009 DE O.berteriana mitochondrion DNA for ribosomal proteins S3 and L16. OS mitochondrion Oenothera berteroana OC Oenothera berteroana RN [1] RL Nucleic Acids Res. 19 (24), 6923-6928 (1991) RL PUBMED 1762921 FT Full length CDS FT GENE : rps3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA48894.1 FT PROTEIN_NAME : ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 25/2 FT EDITING : 3 R(Cga) -> *(Tga) FT EDITING : 31 S(tCa) -> L(tTa) FT EDITING : 32 V(gtC) -> V(gtT) FT EDITING : 42 F(ttC) -> F(ttT) FT EDITING : 105 P(cCg) -> L(cTg) FT EDITING : 145 I(atC) -> I(atT) FT EDITING : 171 S(tCa) -> L(tTa) FT EDITING : 238 S(tCg) -> L(tTg) FT EDITING : 261 F(ttC) -> F(ttT) FT EDITING : 297 S(tCg) -> L(tTg) FT EDITING : 455 P(cCg) -> L(cTg) FT EDITING : 501 S(tCa) -> L(tTa) FT EDITING : 519 R(Cgt) -> C(Tgt) FT EDITING : 530 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 1653 NT; CD 1 atggcaCgaa aaggaaatcc gatttcggta agacttgatc tgaatcgtag CD 51 ttcagattca agttggttca gtgattatta ttatggtaaa tCagtCtatc CD 101 aagatgtcaa tctgagatct tatttCggtt cgatacgtcc acctacgaga CD 151 ctcacctttg gctttcgtct cggtaggtgt attattctac attttcccaa CD 201 aagaacattt attcatttct ttcttccccg tcgaccacga cgactgaaac CD 251 gaggcaaaaa atccagaccc ggaaaggaga aggcccggtg gtgggaattt CD 301 gggaaagtcg ggcCgatcgg gtgtcttcat tcaaacgatg atacagaaga CD 351 agaacgaaac gaagtaggag gccggggggc agggaaaaga gtcgagtcga CD 401 tcaggctcga cgaccgggag aagcaaaacg aaatCaggat ttggccgaaa CD 451 aagaagcaag gctatggata ccatgaccga tcaccatcga taaagaagaa CD 501 tctttctaaa tCacttcggg tcagcggggc cttcaagcat ccgaaatacg CD 551 ccggggtttt aaatgacata gccttcctga tagaaaatga cgactccttc CD 601 agaaaaacga agttattcaa gttctttttc ccaaagaagt cccgctccga CD 651 cggcccgacg agtcatctac ttaaaaggac cccccctgca gtgcgtccct CD 701 ccttgaatta ttCggtcatg caatactatt tgaatacaaa gaaccaaatg CD 751 catttcgacc ccctcgtagt tctcaatcat ttCgtggcac cgggcgtggc CD 801 tgaaccatct acgatggggg gagcgaatcg acagggaaga agcaacgagt CD 851 tgagaatacg ttctcgcatc gctttttttg tagaaagctC gactagcgag CD 901 aaaaagagtt tggccgaaga caaaaagggg ttgccccact tcattcgcca CD 951 agagaatgat cttcgcttcg ctggaagaac aaaaaccacc atctcgctct CD 1001 ttcctttctt cggtgctacc tttttctttc ccagggatgg ggttggggtg CD 1051 tataagcacc ttttttttga ggatgcccgg gaacaactcc taggtcaatt CD 1101 aaggatcaaa tgttggaagc tcatgggtaa ggataaggta atggaattga CD 1151 tagagaaatt catagaccta ggtgggatag gagaattgat aaagggaata CD 1201 gagataatga tagagatcat actgagaaac agaagaattc cgtacgggta CD 1251 caactcttat ttgaacgaag tgaaaaaaat gcgatctttg ttgtctaata CD 1301 gaacaaagac taataccata attgagtcgg tcaagatcaa atctgtttat CD 1351 caaagtgctt ctcCgattgc tcaagacatc tcttttcaac cgaggaacaa CD 1401 aagaagatca tttcgttcta tttttagtca aattgtgaag gatatcccat CD 1451 tagtaatgaa aaaaggggtt gaggggatcc gtatatgttg ttcaggtcga CD 1501 tCaaaaggtg cagaaatagc tagaactgaa tgcggaaagt atggaaaaac CD 1551 atctCgtaat gtatttaacc agaaaatcga ttatgctCct gcggaagtat CD 1601 ctactcgtta cggaatctta ggtgtcaaag tgtggatttc ttatagtaag CD 1651 taa FT EDITED CDNA CD 1 atggcaTgaa aaggaaatcc gatttcggta agacttgatc tgaatcgtag CD 51 ttcagattca agttggttca gtgattatta ttatggtaaa tTagtTtatc CD 101 aagatgtcaa tctgagatct tatttTggtt cgatacgtcc acctacgaga CD 151 ctcacctttg gctttcgtct cggtaggtgt attattctac attttcccaa CD 201 aagaacattt attcatttct ttcttccccg tcgaccacga cgactgaaac CD 251 gaggcaaaaa atccagaccc ggaaaggaga aggcccggtg gtgggaattt CD 301 gggaaagtcg ggcTgatcgg gtgtcttcat tcaaacgatg atacagaaga CD 351 agaacgaaac gaagtaggag gccggggggc agggaaaaga gtcgagtcga CD 401 tcaggctcga cgaccgggag aagcaaaacg aaatTaggat ttggccgaaa CD 451 aagaagcaag gctatggata ccatgaccga tcaccatcga taaagaagaa CD 501 tctttctaaa tTacttcggg tcagcggggc cttcaagcat ccgaaatacg CD 551 ccggggtttt aaatgacata gccttcctga tagaaaatga cgactccttc CD 601 agaaaaacga agttattcaa gttctttttc ccaaagaagt cccgctccga CD 651 cggcccgacg agtcatctac ttaaaaggac cccccctgca gtgcgtccct CD 701 ccttgaatta ttTggtcatg caatactatt tgaatacaaa gaaccaaatg CD 751 catttcgacc ccctcgtagt tctcaatcat ttTgtggcac cgggcgtggc CD 801 tgaaccatct acgatggggg gagcgaatcg acagggaaga agcaacgagt CD 851 tgagaatacg ttctcgcatc gctttttttg tagaaagctT gactagcgag CD 901 aaaaagagtt tggccgaaga caaaaagggg ttgccccact tcattcgcca CD 951 agagaatgat cttcgcttcg ctggaagaac aaaaaccacc atctcgctct CD 1001 ttcctttctt cggtgctacc tttttctttc ccagggatgg ggttggggtg CD 1051 tataagcacc ttttttttga ggatgcccgg gaacaactcc taggtcaatt CD 1101 aaggatcaaa tgttggaagc tcatgggtaa ggataaggta atggaattga CD 1151 tagagaaatt catagaccta ggtgggatag gagaattgat aaagggaata CD 1201 gagataatga tagagatcat actgagaaac agaagaattc cgtacgggta CD 1251 caactcttat ttgaacgaag tgaaaaaaat gcgatctttg ttgtctaata CD 1301 gaacaaagac taataccata attgagtcgg tcaagatcaa atctgtttat CD 1351 caaagtgctt ctcTgattgc tcaagacatc tcttttcaac cgaggaacaa CD 1401 aagaagatca tttcgttcta tttttagtca aattgtgaag gatatcccat CD 1451 tagtaatgaa aaaaggggtt gaggggatcc gtatatgttg ttcaggtcga CD 1501 tTaaaaggtg cagaaatagc tagaactgaa tgcggaaagt atggaaaaac CD 1551 atctTgtaat gtatttaacc agaaaatcga ttatgctTct gcggaagtat CD 1601 ctactcgtta cggaatctta ggtgtcaaag tgtggatttc ttatagtaag CD 1651 taa SQ SEQUENCE 551 AA; MA*KGNPISV RLDLNRSSDS SWFSDYYYGK LVYQDVNLRS YFGSIRPPTR LTFGFRLGRC IILHFPKRTF IHFFLPRRPR RLKRGKKSRP GKEKARWWEF GKVGLIGCLH SNDDTEEERN EVGGRGAGKR VESIRLDDRE KQNEIRIWPK KKQGYGYHDR SPSIKKNLSK LLRVSGAFKH PKYAGVLNDI AFLIENDDSF RKTKLFKFFF PKKSRSDGPT SHLLKRTPPA VRPSLNYLVM QYYLNTKNQM HFDPLVVLNH FVAPGVAEPS TMGGANRQGR SNELRIRSRI AFFVESLTSE KKSLAEDKKG LPHFIRQEND LRFAGRTKTT ISLFPFFGAT FFFPRDGVGV YKHLFFEDAR EQLLGQLRIK CWKLMGKDKV MELIEKFIDL GGIGELIKGI EIMIEIILRN RRIPYGYNSY LNEVKKMRSL LSNRTKTNTI IESVKIKSVY QSASLIAQDI SFQPRNKRRS FRSIFSQIVK DIPLVMKKGV EGIRICCSGR LKGAEIARTE CGKYGKTSCN VFNQKIDYAS AEVSTRYGIL GVKVWISYSK * // ID X69140_3 STANDARD; PRT; 145 AA. AC X69140; DT Tue Jul 21 07:06:42 2009 DE O.berteriana mitochondrion DNA for ribosomal proteins S3 and L16. OS mitochondrion Oenothera berteroana OC Oenothera berteroana RN [1] RL Nucleic Acids Res. 19 (24), 6923-6928 (1991) RL PUBMED 1762921 FT N-terminal not determined FT GENE : rpl16 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA48895.1 FT PROTEIN_NAME : ribosomal protein L16 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3397 - 3831 FT DIRECTIONS : positive FT EDITING : 34 G(ggC) -> G(ggT) FT EDITING : 35 T(aCt) -> I(aTt) FT EDITING : 55 T(aCa) -> I(aTa) FT EDITING : 56 I(atC) -> I(atT) FT EDITING : 78 L(Ctc) -> F(Ttc) FT EDITING : 134 P(cCa) -> L(cTa) FT EDITING : 136 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 435 NT; CD 1 gtgctatatc cgaaacgtac gaaatatagt aaatatcgta aaggcagatg CD 51 tagtaggggt tgcgaaccgg acggtacaca acttagtttt ggaagatatg CD 101 gCaCtaaaag ttgtagagct ggtcgtcttt catatcgagc cattgaagca CD 151 gcgcgtcgtg ctaCaatCgg acaattccat cgtgctatga gcggacaatc CD 201 ccgaagaaat gggaagatat gggtaagagt tCtcgcagat ctccctatta CD 251 ccgggaaacc tacagaagtc agaatgggaa gaggaaaagg aaatcctacg CD 301 ggttggattg ctcgtgtgtc cacgggacaa atcctatttg aaatggatgg CD 351 tgtgagtttg tcaaatgctc gacaagccgc tacattagcg gcgcataaac CD 401 CatgttCgtc aaccaagttt gttcagtggt cgtaa FT EDITED CDNA CD 1 gtgctatatc cgaaacgtac gaaatatagt aaatatcgta aaggcagatg CD 51 tagtaggggt tgcgaaccgg acggtacaca acttagtttt ggaagatatg CD 101 gTaTtaaaag ttgtagagct ggtcgtcttt catatcgagc cattgaagca CD 151 gcgcgtcgtg ctaTaatTgg acaattccat cgtgctatga gcggacaatc CD 201 ccgaagaaat gggaagatat gggtaagagt tTtcgcagat ctccctatta CD 251 ccgggaaacc tacagaagtc agaatgggaa gaggaaaagg aaatcctacg CD 301 ggttggattg ctcgtgtgtc cacgggacaa atcctatttg aaatggatgg CD 351 tgtgagtttg tcaaatgctc gacaagccgc tacattagcg gcgcataaac CD 401 TatgttTgtc aaccaagttt gttcagtggt cgtaa SQ SEQUENCE 145 AA; VLYPKRTKYS KYRKGRCSRG CEPDGTQLSF GRYGIKSCRA GRLSYRAIEA ARRAIIGQFH RAMSGQSRRN GKIWVRVFAD LPITGKPTEV RMGRGKGNPT GWIARVSTGQ ILFEMDGVSL SNARQAATLA AHKLCLSTKF VQWS* // ID X69205_1 STANDARD; PRT; 590 AA. AC X69205; DT Tue Jul 21 07:06:42 2009 DE T.aestivum mitochondrial rps1A gene and orf589. OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Curr. Genet. 24 (3), 248-255 (1993) RL PUBMED 8221934 FT Full length CDS FT GENE : ORF589 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA49143.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 85 - 1854 FT DIRECTIONS : positive FT EDITING : 27 P(cCg) -> L(cTg) FT EDITING : 55 P(Cct) -> S(Tct) FT EDITING : 60 S(tCg) -> L(tTg) FT EDITING : 62 R(Cgt) -> C(Tgt) FT EDITING : 65 P(Cca) -> S(Tca) FT EDITING : 97 S(tCa) -> L(tTa) FT EDITING : 102 P(cCC) -> L(cTT) FT EDITING : 133 S(tCc) -> F(tTc) FT EDITING : 136 S(tCg) -> L(tTg) FT EDITING : 138 F(ttC) -> F(ttT) FT EDITING : 171 R(Cgt) -> C(Tgt) FT EDITING : 247 P(cCt) -> L(cTt) FT EDITING : 250 S(tCa) -> L(tTa) FT EDITING : 263 R(Cgt) -> C(Tgt) FT EDITING : 270 S(tCa) -> L(tTa) FT EDITING : 274 P(cCa) -> L(cTa) FT EDITING : 279 S(tCa) -> L(tTa) FT EDITING : 329 R(Cgc) -> C(Tgc) FT EDITING : 434 R(Cgg) -> W(Tgg) FT EDITING : 443 P(cCa) -> L(cTa) FT EDITING : 449 H(Cat) -> Y(Tat) FT EDITING : 454 R(Cgg) -> W(Tgg) FT EDITING : 460 R(Cgg) -> W(Tgg) FT EDITING : 471 R(Cgg) -> W(Tgg) FT EDITING : 477 R(Cgt) -> C(Tgt) FT EDITING : 491 S(tCg) -> L(tTg) FT EDITING : 498 L(Ctt) -> F(Ttt) FT EDITING : 499 P(CCa) -> L(TTa) FT EDITING : 515 P(Ccc) -> S(Tcc) FT EDITING : 519 S(tCC) -> F(tTT) FT EDITING : 531 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 1770 NT; CD 1 atgatgggaa taactaagca taaatttgga aatgagcacg aaatgtctat CD 51 aaatgaattt tctcattatt cgttatttcC gggtcttttc gttgcattca CD 101 cttacaacaa gaaacaacca ccagcgtttg gtgcagcact tgcattttgg CD 151 tgcattcttc ttCctttcct tggtctttCg ttcCgtcata ttCcaaataa CD 201 cttatctaat tacaacgtat taaccgctaa tgcacctttt ttttatcaaa CD 251 tctcagggac atggtctaat catgagggta gtattttatC atggtgttgg CD 301 atccCCagtt tttatggatt ccttttttgt taccggggtc gaccccaaag CD 351 ccataatgtc tcaaaacgaa gaggctatag agaaactttg attttttCct CD 401 ttgtctCgaa cttCgtgaag aactccattc tatctctcca acaaaaaagt CD 451 tgggctgcgc cccagttgta cactcccttc gttcggagaa cccttgttga CD 501 ttctgaactt Cgttcgcaaa gtaagcgtcc ttttaacggg ccagcccttt CD 551 ttaatgcgcc gcttgaccct gttttgaaaa tgagctttgc tcttctgggc CD 601 gctgggcgct cccgtggttc gcgagaagga aaaaggacta atcttttgtt CD 651 acatctggca cgagatgaaa aagagagagc ttcgtctatc gatgaacagc CD 701 agattgacgg agctcttggc attgctttgt ttttctctcC tttcctatCa CD 751 gcgagttccg atccttttgt tcgaaatttc ttcgttCgta ccgaaccgct CD 801 tgcagaatCa aatccagttc Cacaagatcc tatatCagct atacatcctc CD 851 cttgcattta tgccggagat gtcgccagtg ctatgggctt tgggttatgt CD 901 agatcaaaaa tgatgaatgg gattgtggca ctccactcgc cgccaatgcg CD 951 gaaggatgcc gccgaaaaga atggaacgct gcttCgctct gctggatgcg CD 1001 tcggatccca tataagaagc tcgctcttta cccgatcatt caaacatttt CD 1051 gtgggcggcg cgcctgctct attgttgcgt agcaatagaa gcctgctcat CD 1101 gcagcttcgg cggcgctttt tcgccttctc ttcgctctgg acaggagcgc CD 1151 taatggacac ggggagggag caggcgaagc gtgtcgttcg taatggaaag CD 1201 aaagacacca ctacttcgcc tctttgttgg accgccggcg cgaacacggt CD 1251 ggtctctgac caggaccagg aaccaattcg aatttggatc ttgacatgtC CD 1301 ggttgttttt aaccgtaggc atctcgcCag gaagttggtg ggctCatcat CD 1351 gaattaggtC ggggtggctg gtggtttCgg gatcccgtag aaaatgcgtc CD 1401 ttttatgcct Cgggtattag ccacagctCg tattcattca gtaattctac CD 1451 cccttcttca ttcttggacc tCgcttctga atattttgac tCttCCatgc CD 1501 tgtgtcttag gaaccttttc aatacggtcc ggattgctag ctCccgttca CD 1551 tagttCCgct acagacgata cacgaggaag atttttatgg Cggttcttcc CD 1601 ttctaattac aggcatatct atgactcttt tttaccagat gaagcaggag CD 1651 gcatcggtcc gtagaaccta taaaaaagag atggttgtgg cgcgaagtac CD 1701 tcttgtgcac ctacgtcact cggctcgcgc gcaaccccgc cccgttatgt CD 1751 tatgttatgg aagaatttag FT EDITED CDNA CD 1 atgatgggaa taactaagca taaatttgga aatgagcacg aaatgtctat CD 51 aaatgaattt tctcattatt cgttatttcT gggtcttttc gttgcattca CD 101 cttacaacaa gaaacaacca ccagcgtttg gtgcagcact tgcattttgg CD 151 tgcattcttc ttTctttcct tggtctttTg ttcTgtcata ttTcaaataa CD 201 cttatctaat tacaacgtat taaccgctaa tgcacctttt ttttatcaaa CD 251 tctcagggac atggtctaat catgagggta gtattttatT atggtgttgg CD 301 atccTTagtt tttatggatt ccttttttgt taccggggtc gaccccaaag CD 351 ccataatgtc tcaaaacgaa gaggctatag agaaactttg attttttTct CD 401 ttgtctTgaa cttTgtgaag aactccattc tatctctcca acaaaaaagt CD 451 tgggctgcgc cccagttgta cactcccttc gttcggagaa cccttgttga CD 501 ttctgaactt Tgttcgcaaa gtaagcgtcc ttttaacggg ccagcccttt CD 551 ttaatgcgcc gcttgaccct gttttgaaaa tgagctttgc tcttctgggc CD 601 gctgggcgct cccgtggttc gcgagaagga aaaaggacta atcttttgtt CD 651 acatctggca cgagatgaaa aagagagagc ttcgtctatc gatgaacagc CD 701 agattgacgg agctcttggc attgctttgt ttttctctcT tttcctatTa CD 751 gcgagttccg atccttttgt tcgaaatttc ttcgttTgta ccgaaccgct CD 801 tgcagaatTa aatccagttc Tacaagatcc tatatTagct atacatcctc CD 851 cttgcattta tgccggagat gtcgccagtg ctatgggctt tgggttatgt CD 901 agatcaaaaa tgatgaatgg gattgtggca ctccactcgc cgccaatgcg CD 951 gaaggatgcc gccgaaaaga atggaacgct gcttTgctct gctggatgcg CD 1001 tcggatccca tataagaagc tcgctcttta cccgatcatt caaacatttt CD 1051 gtgggcggcg cgcctgctct attgttgcgt agcaatagaa gcctgctcat CD 1101 gcagcttcgg cggcgctttt tcgccttctc ttcgctctgg acaggagcgc CD 1151 taatggacac ggggagggag caggcgaagc gtgtcgttcg taatggaaag CD 1201 aaagacacca ctacttcgcc tctttgttgg accgccggcg cgaacacggt CD 1251 ggtctctgac caggaccagg aaccaattcg aatttggatc ttgacatgtT CD 1301 ggttgttttt aaccgtaggc atctcgcTag gaagttggtg ggctTatcat CD 1351 gaattaggtT ggggtggctg gtggtttTgg gatcccgtag aaaatgcgtc CD 1401 ttttatgcct Tgggtattag ccacagctTg tattcattca gtaattctac CD 1451 cccttcttca ttcttggacc tTgcttctga atattttgac tTttTTatgc CD 1501 tgtgtcttag gaaccttttc aatacggtcc ggattgctag ctTccgttca CD 1551 tagttTTgct acagacgata cacgaggaag atttttatgg Tggttcttcc CD 1601 ttctaattac aggcatatct atgactcttt tttaccagat gaagcaggag CD 1651 gcatcggtcc gtagaaccta taaaaaagag atggttgtgg cgcgaagtac CD 1701 tcttgtgcac ctacgtcact cggctcgcgc gcaaccccgc cccgttatgt CD 1751 tatgttatgg aagaatttag SQ SEQUENCE 590 AA; MMGITKHKFG NEHEMSINEF SHYSLFLGLF VAFTYNKKQP PAFGAALAFW CILLSFLGLL FCHISNNLSN YNVLTANAPF FYQISGTWSN HEGSILLWCW ILSFYGFLFC YRGRPQSHNV SKRRGYRETL IFFFVLNFVK NSILSLQQKS WAAPQLYTPF VRRTLVDSEL CSQSKRPFNG PALFNAPLDP VLKMSFALLG AGRSRGSREG KRTNLLLHLA RDEKERASSI DEQQIDGALG IALFFSLFLL ASSDPFVRNF FVCTEPLAEL NPVLQDPILA IHPPCIYAGD VASAMGFGLC RSKMMNGIVA LHSPPMRKDA AEKNGTLLCS AGCVGSHIRS SLFTRSFKHF VGGAPALLLR SNRSLLMQLR RRFFAFSSLW TGALMDTGRE QAKRVVRNGK KDTTTSPLCW TAGANTVVSD QDQEPIRIWI LTCWLFLTVG ISLGSWWAYH ELGWGGWWFW DPVENASFMP WVLATACIHS VILPLLHSWT LLLNILTFLC CVLGTFSIRS GLLASVHSFA TDDTRGRFLW WFFLLITGIS MTLFYQMKQE ASVRRTYKKE MVVARSTLVH LRHSARAQPR PVMLCYGRI* // ID X69205_2 STANDARD; PRT; 175 AA. AC X69205; DT Tue Jul 21 07:06:42 2009 DE T.aestivum mitochondrial rps1A gene and orf589. OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Curr. Genet. 24 (3), 248-255 (1993) RL PUBMED 8221934 FT Full length CDS FT GENE : RPS1A FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA49144.1 FT PROTEIN_NAME : ribosomal protein FT EVIDENCE : FT EXCEPTION : FT REGIONS : 2100 - 2624 FT DIRECTIONS : positive FT EDITING : 8 P(cCt) -> L(cTt) FT EDITING : 36 S(tCc) -> F(tTc) FT EDITING : 126 S(tCa) -> L(tTa) FT EDITING : 171 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 525 NT; CD 1 atgttcttgg tggatgcagg ccCtggtacc cccaaaattt gtatgcaaga CD 51 tgagcttaca ggactgccaa tcaagcgagc caccaggttt gagaataagg CD 101 tgggatCcaa gaatgtagtg gctggtgaat cactgatcaa aaagcggatt CD 151 tttgagagat tcttcatcga tctagtggcc ggtgaatcac tgatcaaaga CD 201 gcgagcagcc gccaggttta atgattttgt gggatccctg gatgtagcgg CD 251 ctggcgaacc gcttcttctt ccacaaagat tcagacaaaa ccgagcttgg CD 301 atagaactga agaagatttg gcgaacgaag aaaaaggtca aagggtttat CD 351 tataaaaaaa atcaaaggag gttattCagt agccatcgcg ggtttcacta CD 401 cttttcttcc attcaaaaaa gctcttctaa aaaaaaggat agcgaatgat CD 451 cgattcacca ttgatagcat taaccctaaa aggagggata ttgtgataat CD 501 agcggcagat Caaacaagaa cttga FT EDITED CDNA CD 1 atgttcttgg tggatgcagg ccTtggtacc cccaaaattt gtatgcaaga CD 51 tgagcttaca ggactgccaa tcaagcgagc caccaggttt gagaataagg CD 101 tgggatTcaa gaatgtagtg gctggtgaat cactgatcaa aaagcggatt CD 151 tttgagagat tcttcatcga tctagtggcc ggtgaatcac tgatcaaaga CD 201 gcgagcagcc gccaggttta atgattttgt gggatccctg gatgtagcgg CD 251 ctggcgaacc gcttcttctt ccacaaagat tcagacaaaa ccgagcttgg CD 301 atagaactga agaagatttg gcgaacgaag aaaaaggtca aagggtttat CD 351 tataaaaaaa atcaaaggag gttattTagt agccatcgcg ggtttcacta CD 401 cttttcttcc attcaaaaaa gctcttctaa aaaaaaggat agcgaatgat CD 451 cgattcacca ttgatagcat taaccctaaa aggagggata ttgtgataat CD 501 agcggcagat Taaacaagaa cttga SQ SEQUENCE 175 AA; MFLVDAGLGT PKICMQDELT GLPIKRATRF ENKVGFKNVV AGESLIKKRI FERFFIDLVA GESLIKERAA ARFNDFVGSL DVAAGEPLLL PQRFRQNRAW IELKKIWRTK KKVKGFIIKK IKGGYLVAIA GFTTFLPFKK ALLKKRIAND RFTIDSINPK RRDIVIIAAD *TRT* // ID X69553_1 STANDARD; PRT; 193 AA. AC X69553; DT Tue Jul 21 07:06:42 2009 DE O.berteriana mitochondrial rpl5 gene & partial nad3 gene. OS mitochondrion Oenothera berteroana OC Oenothera berteroana RN [1] RL Mol. Gen. Genet. 240 (3), 445-449 (1993) RL PUBMED 8413195 FT Full length CDS FT GENE : rpl5 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA49284.1 FT PROTEIN_NAME : ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 255 - 833 FT DIRECTIONS : positive FT EDITING : 12 L(tTa) -> S(tCa) FT EDITING : 20 L(cTg) -> P(cCg) FT EDITING : 22 Y(Tac) -> H(Cac) FT EDITING : 31 L(tTg) -> S(tCg) FT EDITING : 108 L(tTg) -> S(tCg) FT EDITING : 112 L(tTg) -> S(tCg) FT EDITING : 173 L(cTa) -> P(cCa) FT EDITING : 174 L(TTg) -> P(CCg) FT CODON_START : 1 CL CDNALEN 579 NT; CD 1 atgtttccac tcaattttca ttacgaagat gtctTacgtc aggatctttt CD 51 gctcaaacTg aatTacgcca acgttatgga agttcctgga tTgtgtgaaa CD 101 tcagaatagt accaaagaca tcctcgacct acgatttcat aataaaaaat CD 151 ggaaaattgg ctatggagat tctgcggggt cagaaattca tacagacaga CD 201 aaggggttcg acaggaaagt catttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgacaaag tatcctccga CD 301 gggcatggaa tgtctaattt ttTggtcaga atctTgactg taatgtctct CD 351 gttagattct cgggtcgaaa tacgggaaaa ctcaattcaa ttctcgatgg CD 401 aaacggagtt ttgcgaattc tccccggaac tggaagatca tttcgagatc CD 451 ttcgaacata ttcgaaggtt caatgttact attgtcactt cggccaacac CD 501 ccaagatgag actttacTaT Tgtggagcgg ctttttgcaa aaagatgagg CD 551 gggaaagttt caaatggaaa actccttaa FT EDITED CDNA CD 1 atgtttccac tcaattttca ttacgaagat gtctCacgtc aggatctttt CD 51 gctcaaacCg aatCacgcca acgttatgga agttcctgga tCgtgtgaaa CD 101 tcagaatagt accaaagaca tcctcgacct acgatttcat aataaaaaat CD 151 ggaaaattgg ctatggagat tctgcggggt cagaaattca tacagacaga CD 201 aaggggttcg acaggaaagt catttcgatc caatccattc ttggagtcaa CD 251 ataaagacaa aggatatgtc agtgacctag cacgacaaag tatcctccga CD 301 gggcatggaa tgtctaattt ttCggtcaga atctCgactg taatgtctct CD 351 gttagattct cgggtcgaaa tacgggaaaa ctcaattcaa ttctcgatgg CD 401 aaacggagtt ttgcgaattc tccccggaac tggaagatca tttcgagatc CD 451 ttcgaacata ttcgaaggtt caatgttact attgtcactt cggccaacac CD 501 ccaagatgag actttacCaC Cgtggagcgg ctttttgcaa aaagatgagg CD 551 gggaaagttt caaatggaaa actccttaa SQ SEQUENCE 193 AA; MFPLNFHYED VSRQDLLLKP NHANVMEVPG SCEIRIVPKT SSTYDFIIKN GKLAMEILRG QKFIQTERGS TGKSFRSNPF LESNKDKGYV SDLARQSILR GHGMSNFSVR ISTVMSLLDS RVEIRENSIQ FSMETEFCEF SPELEDHFEI FEHIRRFNVT IVTSANTQDE TLPPWSGFLQ KDEGESFKWK TP* // ID X69555_1 STANDARD; PRT; 578 AA. AC X69555; DT Tue Jul 21 07:06:42 2009 DE O.berteriana mitochondrial gene for protein involved in cytochrome OS mitochondrion Oenothera berteroana OC Oenothera berteroana RN [1] RL Mol. Gen. Genet. 239 (1-2), 49-57 (1993) RL PUBMED 8389979 FT Full length CDS FT GENE : FT NOTE : unnamed protein product; ORF 577 FT LOCUS_TAG : FT PROTEIN_ID : CAA49287.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 2758 - 4491 FT DIRECTIONS : positive FT EDITING : 1 L(Ttg) -> M(Atg) FT EDITING : 13 L(cTg) -> P(cCg) FT EDITING : 33 L(cTt) -> P(cCt) FT EDITING : 46 L(tTg) -> S(tCg) FT EDITING : 48 C(Tgt) -> R(Cgt) FT EDITING : 51 S(Tcg) -> P(Ccg) FT EDITING : 86 W(Tgg) -> R(Cgg) FT EDITING : 88 L(cTa) -> P(cCa) FT EDITING : 106 V(gTc) -> A(gCc) FT EDITING : 112 Y(Tat) -> H(Cat) FT EDITING : 119 F(tTT) -> S(tCC) FT EDITING : 124 F(ttT) -> F(ttC) FT EDITING : 128 F(tTc) -> S(tCc) FT EDITING : 133 L(cTt) -> P(cCt) FT EDITING : 134 C(Tgt) -> R(Cgt) FT EDITING : 142 V(gTg) -> A(gCg) FT EDITING : 160 C(Tgt) -> R(Cgt) FT EDITING : 187 F(tTt) -> S(tCt) FT EDITING : 203 Y(Tat) -> H(Cat) FT EDITING : 236 F(TTt) -> P(CCt) FT EDITING : 238 L(Tta) -> L(Cta) FT EDITING : 239 L(tTa) -> S(tCa) FT EDITING : 242 S(tcT) -> S(tcC) FT EDITING : 244 F(TTt) -> P(CCt) FT EDITING : 247 *(Tga) -> R(Cga) FT EDITING : 252 C(Tgt) -> R(Cgt) FT EDITING : 259 L(tTa) -> S(tCa) FT EDITING : 263 L(cTa) -> P(cCa) FT EDITING : 268 L(tTa) -> S(tCa) FT EDITING : 306 W(Tgg) -> R(Cgg) FT EDITING : 325 F(tTc) -> S(tCc) FT EDITING : 336 F(ttT) -> F(ttC) FT EDITING : 347 L(Tta) -> L(Cta) FT EDITING : 368 L(tTg) -> S(tCg) FT EDITING : 424 W(Tgg) -> R(Cgg) FT EDITING : 433 L(Tta) -> L(Cta) FT EDITING : 439 Y(Tat) -> H(Cat) FT EDITING : 444 W(Tgg) -> R(Cgg) FT EDITING : 450 W(Tgg) -> R(Cgg) FT EDITING : 461 W(Tgg) -> R(Cgg) FT EDITING : 467 C(Tgt) -> R(Cgt) FT EDITING : 481 L(tTg) -> S(tCg) FT EDITING : 488 F(Ttt) -> L(Ctt) FT CODON_START : 1 CL CDNALEN 1734 NT; CD 1 Ttgtcaatag ttgaattgtt tcattatccg ttatttcTgg gtcttttcgt CD 51 tgcattcact tacaacaaga aagaaccacc agcgtttggt gcagcacTtg CD 101 cattttggtg cattcttctc tctttccttg gtctttTgtt cTgtcatatt CD 151 Tcgaataaca actccaatta caacgtatta accgctaatg cacctttctt CD 201 ttatcaaatc tcagggacat ggtctaatca tgagggtagt attttattat CD 251 ggtgtTggat ccTaagtttt tatggattcc ttctttgtta ccggggtcga CD 301 ccccaaagcc ataatgTctc aaaacgagga ggcTatagag agactttttt CD 351 ttattTTttt gtcttgaact tTgtgaagaa ctTcattcta tctctccTtT CD 401 gttacgaaca aaaaactttg gcagTgcccc agttgtacac tcctttcgtt CD 451 ctacgaaccc ttgttgattc tgaacttTgt tcgcgaagga accggacttt CD 501 tgacgggcca gccttatttt atgcgccgct ttaccctgaa aggaaaatga CD 551 gctttgcttT tctgggcgct aggctccccg tggttcgcgg agaaggaaaa CD 601 aggactTatc ttttattgca tctggcacga gatgataaag agagagcttc CD 651 gtctatcgat gaacagcgga ttgacggagc tcttggcatt gctttgtttt CD 701 tctctTTttt cTtatTagcg agttcTgatT TttttgttTg aaatttcttt CD 751 gttTgtaccg aaccgcttgc agaatTaaat cctgttcTac aagatcctat CD 801 atTagctata catcctcctt gcatttatgc cggagacgtc gccagtgcta CD 851 tgggcttttg cttatgtaga tcaaaaatga tgaatgggat tgtggcactc CD 901 cactcgccgc caatgTggaa ggatgccgcc gaaaagaatg gaaggctgct CD 951 ttgctctgct ggatgcgtcg gatTccgtat aacaagcgag ctttttaccc CD 1001 taaaattTaa agatgtgggc gcaaaatgct atcctgctTt attgttgcgt CD 1051 agcaatagaa gcccgctcat gctgcttcgg cggcgctttt tcgccttctc CD 1101 ttTgctctgg acaggagcgc tagtggacac ggggagggag caggcgaagc CD 1151 gtgtcgttcg taatggaaag aaagataccg ctacttcgcc tctttcttgg CD 1201 accgccggcg cgaacacagt ggtctctgac caggaccagg aaccaattcg CD 1251 aatttggatc ttgacatgtT ggtgcttttt aaacgtaggc atcttgTtag CD 1301 gaagttggtg ggctTatcat gaattaggtT ggggtggctg gtggtttTgg CD 1351 gatcccgtag aaaatgcttc ttttatgcct Tgggtattag ccacagctTg CD 1401 tattcattca gtaattctac cccttcttca ttcttgcacc tTgttgatta CD 1451 atattgtgac tTttctatgc tgtgtcttag gaaccttttc aatacggtcc CD 1501 ggattgctag cttccgttca tagttttgct acagatgata cacgaggaat CD 1551 ctttttatgg cggttcttcc ttctaatgac cggcatatct atgattcttt CD 1601 tctcccagat gaaacagcag gcatcggtcc gtagaaccta tcaaaaggag CD 1651 atggttgtgg cgcgaagtac tcttgtgcac ctacgtcact cggctcgcgc CD 1701 gcaaccccgc ccccaactct tatggaagaa ttga FT EDITED CDNA CD 1 Atgtcaatag ttgaattgtt tcattatccg ttatttcCgg gtcttttcgt CD 51 tgcattcact tacaacaaga aagaaccacc agcgtttggt gcagcacCtg CD 101 cattttggtg cattcttctc tctttccttg gtctttCgtt cCgtcatatt CD 151 Ccgaataaca actccaatta caacgtatta accgctaatg cacctttctt CD 201 ttatcaaatc tcagggacat ggtctaatca tgagggtagt attttattat CD 251 ggtgtCggat ccCaagtttt tatggattcc ttctttgtta ccggggtcga CD 301 ccccaaagcc ataatgCctc aaaacgagga ggcCatagag agactttttt CD 351 ttattCCttt gtcttgaact tCgtgaagaa ctCcattcta tctctccCtC CD 401 gttacgaaca aaaaactttg gcagCgcccc agttgtacac tcctttcgtt CD 451 ctacgaaccc ttgttgattc tgaacttCgt tcgcgaagga accggacttt CD 501 tgacgggcca gccttatttt atgcgccgct ttaccctgaa aggaaaatga CD 551 gctttgcttC tctgggcgct aggctccccg tggttcgcgg agaaggaaaa CD 601 aggactCatc ttttattgca tctggcacga gatgataaag agagagcttc CD 651 gtctatcgat gaacagcgga ttgacggagc tcttggcatt gctttgtttt CD 701 tctctCCttt cCtatCagcg agttcCgatC CttttgttCg aaatttcttt CD 751 gttCgtaccg aaccgcttgc agaatCaaat cctgttcCac aagatcctat CD 801 atCagctata catcctcctt gcatttatgc cggagacgtc gccagtgcta CD 851 tgggcttttg cttatgtaga tcaaaaatga tgaatgggat tgtggcactc CD 901 cactcgccgc caatgCggaa ggatgccgcc gaaaagaatg gaaggctgct CD 951 ttgctctgct ggatgcgtcg gatCccgtat aacaagcgag ctttttaccc CD 1001 taaaattCaa agatgtgggc gcaaaatgct atcctgctCt attgttgcgt CD 1051 agcaatagaa gcccgctcat gctgcttcgg cggcgctttt tcgccttctc CD 1101 ttCgctctgg acaggagcgc tagtggacac ggggagggag caggcgaagc CD 1151 gtgtcgttcg taatggaaag aaagataccg ctacttcgcc tctttcttgg CD 1201 accgccggcg cgaacacagt ggtctctgac caggaccagg aaccaattcg CD 1251 aatttggatc ttgacatgtC ggtgcttttt aaacgtaggc atcttgCtag CD 1301 gaagttggtg ggctCatcat gaattaggtC ggggtggctg gtggtttCgg CD 1351 gatcccgtag aaaatgcttc ttttatgcct Cgggtattag ccacagctCg CD 1401 tattcattca gtaattctac cccttcttca ttcttgcacc tCgttgatta CD 1451 atattgtgac tCttctatgc tgtgtcttag gaaccttttc aatacggtcc CD 1501 ggattgctag cttccgttca tagttttgct acagatgata cacgaggaat CD 1551 ctttttatgg cggttcttcc ttctaatgac cggcatatct atgattcttt CD 1601 tctcccagat gaaacagcag gcatcggtcc gtagaaccta tcaaaaggag CD 1651 atggttgtgg cgcgaagtac tcttgtgcac ctacgtcact cggctcgcgc CD 1701 gcaaccccgc ccccaactct tatggaagaa ttga SQ SEQUENCE 578 AA; MSIVELFHYP LFPGLFVAFT YNKKEPPAFG AAPAFWCILL SFLGLSFRHI PNNNSNYNVL TANAPFFYQI SGTWSNHEGS ILLWCRIPSF YGFLLCYRGR PQSHNASKRG GHRETFFYSF VLNFVKNSIL SLPRYEQKTL AAPQLYTPFV LRTLVDSELR SRRNRTFDGP ALFYAPLYPE RKMSFASLGA RLPVVRGEGK RTHLLLHLAR DDKERASSID EQRIDGALGI ALFFSPFLSA SSDPFVRNFF VRTEPLAESN PVPQDPISAI HPPCIYAGDV ASAMGFCLCR SKMMNGIVAL HSPPMRKDAA EKNGRLLCSA GCVGSRITSE LFTLKFKDVG AKCYPALLLR SNRSPLMLLR RRFFAFSSLW TGALVDTGRE QAKRVVRNGK KDTATSPLSW TAGANTVVSD QDQEPIRIWI LTCRCFLNVG ILLGSWWAHH ELGRGGWWFR DPVENASFMP RVLATARIHS VILPLLHSCT SLINIVTLLC CVLGTFSIRS GLLASVHSFA TDDTRGIFLW RFFLLMTGIS MILFSQMKQQ ASVRRTYQKE MVVARSTLVH LRHSARAQPR PQLLWKN* // ID X70699_1 STANDARD; PRT; 39 AA. AC X70699; DT Tue Jul 21 07:06:43 2009 DE S.oleracea chloroplast psbl gene. OS chloroplast Spinacia oleracea (spinach) OC Spinacia oleracea RN [1] RL Mol. Gen. Genet. 240 (2), 238-244 (1993) RL PUBMED 8355656 FT N-terminal not determined FT GENE : psbL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA50030.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 117 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctttattgg gggctattac tcatttttgt acttgctgtt ttattttcga CD 101 attatttttt caattaa FT EDITED CDNA CD 1 aTgacacaat caaacccgaa cgaacaaaat gttgaattga atcgtaccag CD 51 tctttattgg gggctattac tcatttttgt acttgctgtt ttattttcga CD 101 attatttttt caattaa SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID X74164_1 STANDARD; PRT; 207 AA. AC X74164; DT Tue Jul 21 07:06:43 2009 DE O.berteriana mitochondrion ORF206. OS mitochondrion Oenothera berteroana OC Oenothera berteroana RN [1] RL Plant Mol. Biol. 25 (1), 33-42 (1994) RL PUBMED 8003696 FT Full length CDS FT GENE : ORF206 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA52278.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 59 - 679 FT DIRECTIONS : positive FT EDITING : 10 H(Cat) -> Y(Tat) FT EDITING : 13 I(atC) -> I(atT) FT EDITING : 15 P(Cca) -> S(Tca) FT EDITING : 19 I(atC) -> I(atT) FT EDITING : 24 P(CCg) -> L(TTg) FT EDITING : 27 S(tCg) -> L(tTg) FT EDITING : 29 I(atC) -> I(atT) FT EDITING : 30 V(gtC) -> V(gtT) FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 46 S(tCC) -> F(tTT) FT EDITING : 50 P(CCg) -> L(TTg) FT EDITING : 54 P(Cct) -> S(Tct) FT EDITING : 60 P(cCt) -> L(cTt) FT EDITING : 61 P(Ccc) -> S(Tcc) FT EDITING : 65 P(CCt) -> F(TTt) FT EDITING : 102 R(Cgt) -> C(Tgt) FT EDITING : 123 R(Cgg) -> W(Tgg) FT EDITING : 127 L(Cta) -> L(Tta) FT EDITING : 131 P(CCg) -> L(TTg) FT EDITING : 132 V(gtC) -> V(gtT) FT EDITING : 133 L(Ctg) -> L(Ttg) FT EDITING : 136 L(Ctg) -> L(Ttg) FT EDITING : 142 R(Cgt) -> C(Tgt) FT EDITING : 143 S(tCg) -> L(tTg) FT EDITING : 156 S(tCg) -> L(tTg) FT EDITING : 159 S(tCa) -> L(tTa) FT EDITING : 162 S(tCa) -> L(tTa) FT EDITING : 165 S(tCa) -> L(tTa) FT EDITING : 168 P(CCa) -> L(TTa) FT EDITING : 171 S(tCt) -> F(tTt) FT EDITING : 172 R(Cgt) -> C(Tgt) FT EDITING : 183 P(cCt) -> L(cTt) FT EDITING : 184 S(tCa) -> L(tTa) FT EDITING : 185 S(tCg) -> L(tTg) FT EDITING : 189 S(tCc) -> F(tTc) FT EDITING : 190 S(tCt) -> F(tTt) FT EDITING : 191 P(cCg) -> L(cTg) FT EDITING : 192 F(ttC) -> F(ttT) FT EDITING : 199 S(tCg) -> L(tTg) FT EDITING : 204 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 621 NT; CD 1 atgagaagac tctttcttga actatatCat aaacagatCt tcCcatccac CD 51 accaatCacg agtttttctC CgttcctctC gtatatCgtC gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttCat gtcattCCca tttaggtCCg CD 151 atttggatcC ctctgttgtt tccttttcCt Cccgcacctt ttCCtcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt gcttattgct CD 251 tgccaaaaat cctacttcta caattggtag gtcactgggt tattcaaata CD 301 agtCgtgttt tctgtggttt tcccatgtta caactgctgt accaattcgg CD 351 tcgatccgga atggatCggt taaacattCt attagggagc CCggtCCtga CD 401 ctcttCtgtg tggtattcat tctCgttCgg ctcttggaat aacatcaagc CD 451 agtggttgga acagctCgca aaattCaacc acttCaccta cttCattgcc CD 501 cCCaactctt tCtCgtacct ctattgaaac agaatggttt catgttcCtt CD 551 CatCgattgg ttattCctCt cCgttCgtat ctctttttcc aatttCggtc CD 601 tcgattagtt Cacaagattg a FT EDITED CDNA CD 1 atgagaagac tctttcttga actatatTat aaacagatTt tcTcatccac CD 51 accaatTacg agtttttctT TgttcctctT gtatatTgtT gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttTat gtcattTTca tttaggtTTg CD 151 atttggatcT ctctgttgtt tccttttcTt Tccgcacctt ttTTtcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt gcttattgct CD 251 tgccaaaaat cctacttcta caattggtag gtcactgggt tattcaaata CD 301 agtTgtgttt tctgtggttt tcccatgtta caactgctgt accaattcgg CD 351 tcgatccgga atggatTggt taaacattTt attagggagc TTggtTTtga CD 401 ctcttTtgtg tggtattcat tctTgttTgg ctcttggaat aacatcaagc CD 451 agtggttgga acagctTgca aaattTaacc acttTaccta cttTattgcc CD 501 cTTaactctt tTtTgtacct ctattgaaac agaatggttt catgttcTtt CD 551 TatTgattgg ttattTctTt cTgttTgtat ctctttttcc aatttTggtc CD 601 tcgattagtt Tacaagattg a SQ SEQUENCE 207 AA; MRRLFLELYY KQIFSSTPIT SFSLFLLYIV VTPLMLGFEK DFLCHFHLGL IWISLLFPFL SAPFFRNEKE DGTLELYYLS AYCLPKILLL QLVGHWVIQI SCVFCGFPML QLLYQFGRSG MDWLNILLGS LVLTLLCGIH SCLALGITSS SGWNSLQNLT TLPTLLPLTL FCTSIETEWF HVLLLIGYFF LFVSLFPILV SISLQD* // ID X74826_2 STANDARD; PRT; 140 AA. AC X74826; DT Tue Jul 21 07:06:43 2009 DE S.tuberosum mitochondrial DNA for ribosomal protein S10. OS mitochondrion Solanum tuberosum (potato) OC Solanum tuberosum RN [1] RL Plant Mol. Biol. 25 (4), 743-749 (1994) RL PUBMED 8061325 FT Full length CDS FT GENE : rps10 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA52823.1 FT PROTEIN_NAME : ribosomal protein S10 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 103/1 FT EDITING : 20 T(aCg) -> M(aTg) FT EDITING : 99 R(Cgg) -> W(Tgg) FT EDITING : 120 S(tCg) -> L(tTg) FT EDITING : 130 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 420 NT; CD 1 atgagacaaa ggagagcact tagacgagtc agccaaaaag aaagaccacc CD 51 aaaagtaaCg accaccaaga taggcatagt aattcgatct tttgatcacc CD 101 catttttgga aaaccatttt tgggggcttc cgccttacac acggaagatt CD 151 ggattgcctg aatcacgagt cttatatact gtgttacgat cacctcatat CD 201 tgataaaaag tccagagaac aattttttat gaaaataaag aaagaatttc CD 251 tggtcataaa aacagaaagg catgaattgc gcaagaagtt ctttCggtta CD 301 aaacgccagc gtatatttgg agctcaatat gaaatcctat tttcttgcaa CD 351 gacccgttCg gataagggaa aactccagag attgcttCga aataagatcc CD 401 ttgcgttgac cctttcctga FT EDITED CDNA CD 1 atgagacaaa ggagagcact tagacgagtc agccaaaaag aaagaccacc CD 51 aaaagtaaTg accaccaaga taggcatagt aattcgatct tttgatcacc CD 101 catttttgga aaaccatttt tgggggcttc cgccttacac acggaagatt CD 151 ggattgcctg aatcacgagt cttatatact gtgttacgat cacctcatat CD 201 tgataaaaag tccagagaac aattttttat gaaaataaag aaagaatttc CD 251 tggtcataaa aacagaaagg catgaattgc gcaagaagtt ctttTggtta CD 301 aaacgccagc gtatatttgg agctcaatat gaaatcctat tttcttgcaa CD 351 gacccgttTg gataagggaa aactccagag attgcttTga aataagatcc CD 401 ttgcgttgac cctttcctga SQ SEQUENCE 140 AA; MRQRRALRRV SQKERPPKVM TTKIGIVIRS FDHPFLENHF WGLPPYTRKI GLPESRVLYT VLRSPHIDKK SREQFFMKIK KEFLVIKTER HELRKKFFWL KRQRIFGAQY EILFSCKTRL DKGKLQRLL* NKILALTLS* // ID X75036_1 STANDARD; PRT; 395 AA. AC X75036; DT Tue Jul 21 07:06:43 2009 DE T.aestivum mitochondrial nad7 gene for NADH dehydrogenase subunit OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Mol. Gen. Genet. 244 (1), 81-89 (1994) RL PUBMED 8041365 FT Full length CDS FT GENE : nad7 FT NOTE : subunit 7 FT LOCUS_TAG : FT PROTEIN_ID : CAA52952.1 FT PROTEIN_NAME : NADH dehydrogenase FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 48/2 FT INTRON 71/2 FT INTRON 227/1 FT INTRON 308/2 FT EDITING : 13 S(tCg) -> L(tTg) FT EDITING : 15 S(tCC) -> F(tTT) FT EDITING : 26 S(tCa) -> L(tTa) FT EDITING : 28 S(tCa) -> L(tTa) FT EDITING : 33 N(aaC) -> N(aaT) FT EDITING : 46 S(tCa) -> L(tTa) FT EDITING : 75 T(aCg) -> M(aTg) FT EDITING : 82 H(Cat) -> Y(Tat) FT EDITING : 84 S(tCa) -> L(tTa) FT EDITING : 85 A(gcC) -> A(gcT) FT EDITING : 112 S(tCa) -> L(tTa) FT EDITING : 115 S(tCa) -> L(tTa) FT EDITING : 118 S(tCa) -> L(tTa) FT EDITING : 128 S(tCa) -> L(tTa) FT EDITING : 149 P(Ccg) -> S(Tcg) FT EDITING : 177 S(tcC) -> S(tcT) FT EDITING : 178 S(tCC) -> F(tTT) FT EDITING : 193 S(tCa) -> L(tTa) FT EDITING : 227 P(Cct) -> S(Tct) FT EDITING : 233 S(tCg) -> L(tTg) FT EDITING : 242 H(Cat) -> Y(Tat) FT EDITING : 245 S(tCg) -> L(tTg) FT EDITING : 247 L(Ctt) -> F(Ttt) FT EDITING : 257 R(Cgc) -> C(Tgc) FT EDITING : 279 P(cCt) -> L(cTt) FT EDITING : 309 S(tCa) -> L(tTa) FT EDITING : 325 P(Cct) -> S(Tct) FT EDITING : 363 S(tCa) -> L(tTa) FT EDITING : 368 S(tCt) -> F(tTt) FT EDITING : 375 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1185 NT; CD 1 atgacgacta ggaacgggca aatcaagaat ttcacttCga attCCggacc CD 51 tcaacatcct gctgctcatg gtgtttCacg atCagtattg gaaatgaaCg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggatCact ccatagaggg CD 151 actgagaaat taatcgagta caaaacttat cttcaagctt taccttattt CD 201 tgatcgttta gactatgttt ctaCgatggc ccaagaacac gctCattctt CD 251 CagcCgtaga gagacttttg aattgtgagg taccattacg agctcaatat CD 301 ataagagtgt tattctgtga aataactcga atttCaaatc attCacttgc CD 351 ttCaactact catgctatgg atgtgggagc atCaactccg ttcctttggg CD 401 cttttgagga gcgggagaaa ttgttggaat tctatgaaag agtcCcggga CD 451 gccaggatgc atgccagttt catacgacct ggtggagtgg cacaagatct CD 501 gcctcttggc ttatgtcgag atattgattc CtCCacacaa caatttgctt CD 551 ctcgtatcga cgaattagaa gagatgtCaa ccggcaaccg tatctggaaa CD 601 caacgattag tggatattgg tactgtcact gcacagcaag caaaggattg CD 651 gggattcagt ggtgtaatgt taagaggtCc tggggtatgc tgggattCgc CD 701 gaagagcagc accttacgat gttCatgacc aatCggatCt tgacgtacca CD 751 gtaggtacca gaggagatCg ctatgatcgt tactgtatcc gtattgaaga CD 801 gatgcgacaa agtgttcgga tcattgtgca atgtcCtaat caaatgccta CD 851 gtggcatgat caaagccgat gatcgtaagc tatgtcctcc atcacgatct CD 901 cgaatgaaac tatccatgga atcctCaatt caccatttcg aactttatac CD 951 agaaggtttt tccgtaccag ctCcttctac ctataccgca gttgaagcac CD 1001 ctaaaggtga atttggtgtc tttcttgtca gtaatgggag taatcgtccc CD 1051 taccgttgta aaataagagc acctggcttt gcccattCac aaggactcga CD 1101 ttCtatgtcc aaacatcaca tgcCagcaga tgtagtcacc atcataggta CD 1151 ctcaagatat tgtgtttgga gaggtagata gatag FT EDITED CDNA CD 1 atgacgacta ggaacgggca aatcaagaat ttcacttTga attTTggacc CD 51 tcaacatcct gctgctcatg gtgtttTacg atTagtattg gaaatgaaTg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggatTact ccatagaggg CD 151 actgagaaat taatcgagta caaaacttat cttcaagctt taccttattt CD 201 tgatcgttta gactatgttt ctaTgatggc ccaagaacac gctTattctt CD 251 TagcTgtaga gagacttttg aattgtgagg taccattacg agctcaatat CD 301 ataagagtgt tattctgtga aataactcga atttTaaatc attTacttgc CD 351 ttTaactact catgctatgg atgtgggagc atTaactccg ttcctttggg CD 401 cttttgagga gcgggagaaa ttgttggaat tctatgaaag agtcTcggga CD 451 gccaggatgc atgccagttt catacgacct ggtggagtgg cacaagatct CD 501 gcctcttggc ttatgtcgag atattgattc TtTTacacaa caatttgctt CD 551 ctcgtatcga cgaattagaa gagatgtTaa ccggcaaccg tatctggaaa CD 601 caacgattag tggatattgg tactgtcact gcacagcaag caaaggattg CD 651 gggattcagt ggtgtaatgt taagaggtTc tggggtatgc tgggattTgc CD 701 gaagagcagc accttacgat gttTatgacc aatTggatTt tgacgtacca CD 751 gtaggtacca gaggagatTg ctatgatcgt tactgtatcc gtattgaaga CD 801 gatgcgacaa agtgttcgga tcattgtgca atgtcTtaat caaatgccta CD 851 gtggcatgat caaagccgat gatcgtaagc tatgtcctcc atcacgatct CD 901 cgaatgaaac tatccatgga atcctTaatt caccatttcg aactttatac CD 951 agaaggtttt tccgtaccag ctTcttctac ctataccgca gttgaagcac CD 1001 ctaaaggtga atttggtgtc tttcttgtca gtaatgggag taatcgtccc CD 1051 taccgttgta aaataagagc acctggcttt gcccattTac aaggactcga CD 1101 ttTtatgtcc aaacatcaca tgcTagcaga tgtagtcacc atcataggta CD 1151 ctcaagatat tgtgtttgga gaggtagata gatag SQ SEQUENCE 395 AA; MTTRNGQIKN FTLNFGPQHP AAHGVLRLVL EMNGEVVERA EPHIGLLHRG TEKLIEYKTY LQALPYFDRL DYVSMMAQEH AYSLAVERLL NCEVPLRAQY IRVLFCEITR ILNHLLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMLTGNRIWK QRLVDIGTVT AQQAKDWGFS GVMLRGSGVC WDLRRAAPYD VYDQLDFDVP VGTRGDCYDR YCIRIEEMRQ SVRIIVQCLN QMPSGMIKAD DRKLCPPSRS RMKLSMESLI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRCKIRAPGF AHLQGLDFMS KHHMLADVVT IIGTQDIVFG EVDR* // ID X75579_1 STANDARD; PRT; 48 AA. AC X75579; DT Tue Jul 21 07:06:43 2009 DE Solanum tuberosumn nad7 gene, partial. OS Solanum tuberosum (potato) OC Solanum tuberosum RN [1] RL Mol. Gen. Genet. 244 (1), 33-40 (1994) RL PUBMED 8041359 FT C-terminal not determined FT GENE : nad7 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA53256.1 FT PROTEIN_NAME : NADH dehydrogenase FT EVIDENCE : FT EXCEPTION : FT REGIONS : 181 - 323 FT DIRECTIONS : positive FT EDITING : 13 S(tCg) -> L(tTg) FT EDITING : 26 S(tCa) -> L(tTa) FT EDITING : 28 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 143 NT; CD 1 atgacgacta agaacaggca aatccaaaat ttcacttCga atttcggacc CD 51 tcaacatcct gctgctcatg gtgtttCacg atCagtattg gaaatgaacg CD 101 gagaagtggt ggaacgcgcg gaaccacata ttggattact cca FT EDITED CDNA CD 1 atgacgacta agaacaggca aatccaaaat ttcacttTga atttcggacc CD 51 tcaacatcct gctgctcatg gtgtttTacg atTagtattg gaaatgaacg CD 101 gagaagtggt ggaacgcgcg gaaccacata ttggattact cca SQ SEQUENCE 48 AA; MTTKNRQIQN FTLNFGPQHP AAHGVLRLVL EMNGEVVERA EPHIGLLX // ID X76974_1 STANDARD; PRT; 7 AA. AC X76974; DT Tue Jul 21 07:06:43 2009 DE S.oleraceae chloroplast ndhD mRNA for NADH dehydrogenase subunit 4. OS chloroplast Spinacia oleracea (spinach) OC Spinacia oleracea RN [1] RL Gene 146 (2), 177-182 (1994) RL PUBMED 8076816 FT C-terminal not determined FT GENE : ndhD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA54279.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 58 - 78 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 21 NT; CD 1 aCgaattctt ttccctggtt a FT EDITED CDNA CD 1 aTgaattctt ttccctggtt a SQ SEQUENCE 7 AA; MNSFPWL // ID X76975_1 STANDARD; PRT; 7 AA. AC X76975; DT Tue Jul 21 07:06:43 2009 DE N.tabacum chloroplast ndhD mRNA for NADH dehydrogenase subunit 4. OS chloroplast Nicotiana tabacum (common tobacco) OC Nicotiana tabacum RN [1] RL Gene 146 (2), 177-182 (1994) RL PUBMED 8076816 FT C-terminal not determined FT GENE : ndhH FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA54280.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 58 - 78 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 21 NT; CD 1 aCgaattatt ttccttggtt a FT EDITED CDNA CD 1 aTgaattatt ttccttggtt a SQ SEQUENCE 7 AA; MNYFPWL // ID X76976_1 STANDARD; PRT; 7 AA. AC X76976; DT Tue Jul 21 07:06:43 2009 DE A.major chloroplast ndhD mRNA for NADH dehydrogenase subunit 4. OS chloroplast Antirrhinum majus (snapdragon) OC Antirrhinum majus RN [1] RL Gene 146 (2), 177-182 (1994) RL PUBMED 8076816 FT C-terminal not determined FT GENE : ndhD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA54281.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 58 - 78 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 21 NT; CD 1 aCgaaccatt ttccttgctt a FT EDITED CDNA CD 1 aTgaaccatt ttccttgctt a SQ SEQUENCE 7 AA; MNHFPCL // ID X77950_1 STANDARD; PRT; 259 AA. AC X77950; DT Tue Jul 21 07:06:43 2009 DE N.tabacum (with N.bigelovii cytoplasm) mitochondrial truncated atpA OS mitochondrion Nicotiana tabacum (common tobacco) OC Nicotiana tabacum RN [1] RL Plant Physiol. 106 (3), 1223-1224 (1994) RL PUBMED 7824650 FT Full length CDS FT GENE : mitochondrial truncated atpA gene FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA54916.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 8 - 784 FT DIRECTIONS : positive FT EDITING : 115 P(Cct) -> S(Tct) FT EDITING : 142 S(tCa) -> L(tTa) FT EDITING : 155 L(Ctt) -> F(Ttt) FT EDITING : 180 P(cCg) -> L(cTg) FT EDITING : 221 P(cCa) -> L(cTa) FT EDITING : 246 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 777 NT; CD 1 atgtccgtgg ccctatgccc gaccatgccg aggtgtgata ccaagagagc CD 51 catcgcaacc actgatctac ccattgggct agaagagtgc gctcctctat CD 101 ctctcgttca ccatcgacca ccaggtcgtg aggctttccc aggggatgtt CD 151 ttctatttac attcccgtct cttagaaaga gcggctaaac gatcggacca CD 201 gacaggcgca ggtagcttga ccgccttacc cgtcattgaa acacaagctg CD 251 gagacgtatc ggcctatatt cccaccaatg tgatccccat tactgatgga CD 301 caaatctgtt tggaaacaga gctcttttat cgcggaatta gaCctgcgat CD 351 taacgtcggc ttatctgtca gtcgcgtcgg gtctgccgct cagttgaaaa CD 401 ctatgaaaca agtctgcggt agttCaaaac tggaattggc acaatatcgc CD 451 gaagtggccg ccCttgctca atttggctca gaccttgatg ctgcgactca CD 501 ggcattactc aatagaggtg caaggctgac agaagtacCg aaacaaccac CD 551 aatatgcacc actgccaatt gaaaaacaaa ttctagtcat ttatgcagct CD 601 gtcaatggat tctgtgatcg aatgccacta gacagaattt ctcaatatga CD 651 gagagccatt cCaaatagtg tcaaaccaga attactacaa tcctttttag CD 701 aaaaaggtgg cttaactaac gaaagaaaga tggaacCaga tacattctta CD 751 aaagaaagtg ctttagcttt tatttaa FT EDITED CDNA CD 1 atgtccgtgg ccctatgccc gaccatgccg aggtgtgata ccaagagagc CD 51 catcgcaacc actgatctac ccattgggct agaagagtgc gctcctctat CD 101 ctctcgttca ccatcgacca ccaggtcgtg aggctttccc aggggatgtt CD 151 ttctatttac attcccgtct cttagaaaga gcggctaaac gatcggacca CD 201 gacaggcgca ggtagcttga ccgccttacc cgtcattgaa acacaagctg CD 251 gagacgtatc ggcctatatt cccaccaatg tgatccccat tactgatgga CD 301 caaatctgtt tggaaacaga gctcttttat cgcggaatta gaTctgcgat CD 351 taacgtcggc ttatctgtca gtcgcgtcgg gtctgccgct cagttgaaaa CD 401 ctatgaaaca agtctgcggt agttTaaaac tggaattggc acaatatcgc CD 451 gaagtggccg ccTttgctca atttggctca gaccttgatg ctgcgactca CD 501 ggcattactc aatagaggtg caaggctgac agaagtacTg aaacaaccac CD 551 aatatgcacc actgccaatt gaaaaacaaa ttctagtcat ttatgcagct CD 601 gtcaatggat tctgtgatcg aatgccacta gacagaattt ctcaatatga CD 651 gagagccatt cTaaatagtg tcaaaccaga attactacaa tcctttttag CD 701 aaaaaggtgg cttaactaac gaaagaaaga tggaacTaga tacattctta CD 751 aaagaaagtg ctttagcttt tatttaa SQ SEQUENCE 259 AA; MSVALCPTMP RCDTKRAIAT TDLPIGLEEC APLSLVHHRP PGREAFPGDV FYLHSRLLER AAKRSDQTGA GSLTALPVIE TQAGDVSAYI PTNVIPITDG QICLETELFY RGIRSAINVG LSVSRVGSAA QLKTMKQVCG SLKLELAQYR EVAAFAQFGS DLDAATQALL NRGARLTEVL KQPQYAPLPI EKQILVIYAA VNGFCDRMPL DRISQYERAI LNSVKPELLQ SFLEKGGLTN ERKMELDTFL KESALAFI* // ID X78036_1 STANDARD; PRT; 455 AA. AC X78036; DT Tue Jul 21 07:06:43 2009 DE O.berteriana mitochondrial DNA for orf454. OS mitochondrion Oenothera berteroana OC Oenothera berteroana RN [1] RL Mol. Gen. Genet. 246 (2), 166-173 (1995) RL PUBMED 7862087 FT Full length CDS FT GENE : FT NOTE : unnamed protein product; orf454; FT LOCUS_TAG : FT PROTEIN_ID : CAA54966.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT INTRON 256/2 FT EDITING : 439 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1365 NT; CD 1 atggtccaac tacaaaactt tttctttttc attacttcca tggtcgtgcc CD 51 tcgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccacggg tgccccttct tccaatggaa ctataattcc tattcctatc CD 151 ccttcattcc ctcttttggt ctatctacat tccaggaaat tcatacgctc CD 201 catggacgga gcaaaaagtg gagtcttggt cagagcaagc cgccctattc CD 251 tattaccaga cataattggg agaagctcat ccgaaactag agctagaaag CD 301 gccgcatttc gtttcgttcc cgttcttcat ttccttcttc tcgaatccaa CD 351 gggggacttc tcatatttcg aatctttctg cggtgtgctc cgtttactat CD 401 tctttctaac tctcttctct ttaccacgcg ataggtcagc gaagcgtgag CD 451 cgggcgcgga gaaggaaagg ccaaagactt cggcctaagg gaaatgagca CD 501 aggacgaaat gacaagatga ggtgctccgg gcactcccat ttagaaagaa CD 551 gcgtcgaagg ttttgggcct gtagctttcc ccgtcccccc ttctgagggt CD 601 ggtgcttgtg tggggggtgt gccaccagaa atcgggcttg aagctctcgc CD 651 cttatcaacg agccgacagc tgatggctgt tggtcacgac tactaccaaa CD 701 aagctccaat gaaaatgaat atttcacatg gaggagtgtg catctttatg CD 751 ttgggtgttc ttctgtctaa cacaaagaag atacagctca ctcaacgatt CD 801 gcctttgggt tccgaactcc atatggggaa ggagcgttgt tgtttgcgag CD 851 gtctcgatca tttacatggg cccacttctc attccatttg tgggaatttg CD 901 atgatctata aaccgtccct aaggaacgat cggctcatgt ttgagcatga CD 951 tgaatcactt cgtgccgacc tgttgccaat caactttccg gcctcatatg CD 1001 agaatggaaa agtggagcat tttctgcatc ggtgggtgaa gaatcgcgaa CD 1051 cataataatt tctggttgac catgttccca gaaaaaagat actttcgaga CD 1101 aagcacgagc acgactgaag tggctataca tacaaatcca tttacggatc CD 1151 tatatgcttc gattggaact ggaagttcaa gaacaggcgg ctggtatacc CD 1201 accataatga aactgccttt tatttttttt attcggatag gatttatgtt CD 1251 ggcttcgttg ggaggctcgg gtagtttgtt acgtcagctc caaaaggata CD 1301 agttgcgttg gaatCgagaa agttccgtgg agctcataat aaaaaaaact CD 1351 tttttcaact tgtag FT EDITED CDNA CD 1 atggtccaac tacaaaactt tttctttttc attacttcca tggtcgtgcc CD 51 tcgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccacggg tgccccttct tccaatggaa ctataattcc tattcctatc CD 151 ccttcattcc ctcttttggt ctatctacat tccaggaaat tcatacgctc CD 201 catggacgga gcaaaaagtg gagtcttggt cagagcaagc cgccctattc CD 251 tattaccaga cataattggg agaagctcat ccgaaactag agctagaaag CD 301 gccgcatttc gtttcgttcc cgttcttcat ttccttcttc tcgaatccaa CD 351 gggggacttc tcatatttcg aatctttctg cggtgtgctc cgtttactat CD 401 tctttctaac tctcttctct ttaccacgcg ataggtcagc gaagcgtgag CD 451 cgggcgcgga gaaggaaagg ccaaagactt cggcctaagg gaaatgagca CD 501 aggacgaaat gacaagatga ggtgctccgg gcactcccat ttagaaagaa CD 551 gcgtcgaagg ttttgggcct gtagctttcc ccgtcccccc ttctgagggt CD 601 ggtgcttgtg tggggggtgt gccaccagaa atcgggcttg aagctctcgc CD 651 cttatcaacg agccgacagc tgatggctgt tggtcacgac tactaccaaa CD 701 aagctccaat gaaaatgaat atttcacatg gaggagtgtg catctttatg CD 751 ttgggtgttc ttctgtctaa cacaaagaag atacagctca ctcaacgatt CD 801 gcctttgggt tccgaactcc atatggggaa ggagcgttgt tgtttgcgag CD 851 gtctcgatca tttacatggg cccacttctc attccatttg tgggaatttg CD 901 atgatctata aaccgtccct aaggaacgat cggctcatgt ttgagcatga CD 951 tgaatcactt cgtgccgacc tgttgccaat caactttccg gcctcatatg CD 1001 agaatggaaa agtggagcat tttctgcatc ggtgggtgaa gaatcgcgaa CD 1051 cataataatt tctggttgac catgttccca gaaaaaagat actttcgaga CD 1101 aagcacgagc acgactgaag tggctataca tacaaatcca tttacggatc CD 1151 tatatgcttc gattggaact ggaagttcaa gaacaggcgg ctggtatacc CD 1201 accataatga aactgccttt tatttttttt attcggatag gatttatgtt CD 1251 ggcttcgttg ggaggctcgg gtagtttgtt acgtcagctc caaaaggata CD 1301 agttgcgttg gaatTgagaa agttccgtgg agctcataat aaaaaaaact CD 1351 tttttcaact tgtag SQ SEQUENCE 455 AA; MVQLQNFFFF ITSMVVPRGT AAPVLLKWFV SRDVPTGAPS SNGTIIPIPI PSFPLLVYLH SRKFIRSMDG AKSGVLVRAS RPILLPDIIG RSSSETRARK AAFRFVPVLH FLLLESKGDF SYFESFCGVL RLLFFLTLFS LPRDRSAKRE RARRRKGQRL RPKGNEQGRN DKMRCSGHSH LERSVEGFGP VAFPVPPSEG GACVGGVPPE IGLEALALST SRQLMAVGHD YYQKAPMKMN ISHGGVCIFM LGVLLSNTKK IQLTQRLPLG SELHMGKERC CLRGLDHLHG PTSHSICGNL MIYKPSLRND RLMFEHDESL RADLLPINFP ASYENGKVEH FLHRWVKNRE HNNFWLTMFP EKRYFRESTS TTEVAIHTNP FTDLYASIGT GSSRTGGWYT TIMKLPFIFF IRIGFMLASL GGSGSLLRQL QKDKLRWN*E SSVELIIKKT FFNL* // ID X79609_1 STANDARD; PRT; 241 AA. AC X79609; DT Tue Jul 21 07:06:43 2009 DE T.aestivum (Capitole) mitochondrial orf240 gene. OS Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Mol. Gen. Genet. 246 (1), 91-99 (1995) RL PUBMED 7529870 FT Full length CDS FT GENE : FT NOTE : orf240 FT LOCUS_TAG : FT PROTEIN_ID : CAA56116.1 FT PROTEIN_NAME : putative heme ABC transporter membrane domain FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2565 - 3287 FT DIRECTIONS : positive FT EDITING : 26 R(Cgg) -> W(Tgg) FT EDITING : 35 H(Cat) -> Y(Tat) FT EDITING : 39 R(Cgg) -> W(Tgg) FT EDITING : 54 S(tCg) -> L(tTg) FT EDITING : 60 A(gCg) -> V(gTg) FT EDITING : 62 R(Cgg) -> W(Tgg) FT EDITING : 76 S(tCc) -> F(tTc) FT EDITING : 79 P(cCa) -> L(cTa) FT EDITING : 100 S(tCt) -> F(tTt) FT EDITING : 111 R(Cgg) -> W(Tgg) FT EDITING : 120 R(Cgg) -> W(Tgg) FT EDITING : 133 F(ttC) -> F(ttT) FT EDITING : 134 L(Ctt) -> F(Ttt) FT EDITING : 140 L(Ctg) -> L(Ttg) FT EDITING : 141 R(Cgt) -> C(Tgt) FT EDITING : 146 P(Cct) -> S(Tct) FT EDITING : 149 P(cCg) -> L(cTg) FT EDITING : 151 P(Cct) -> S(Tct) FT EDITING : 153 S(tCa) -> L(tTa) FT EDITING : 155 R(Cgt) -> C(Tgt) FT EDITING : 156 A(gCt) -> V(gTt) FT EDITING : 158 P(cCg) -> L(cTg) FT EDITING : 166 S(tCt) -> F(tTt) FT EDITING : 167 P(Cca) -> S(Tca) FT EDITING : 174 S(tCg) -> L(tTg) FT EDITING : 183 S(tCt) -> F(tTt) FT EDITING : 190 P(Cct) -> S(Tct) FT EDITING : 192 P(cCc) -> L(cTc) FT EDITING : 203 P(cCc) -> L(cTc) FT EDITING : 205 S(tCt) -> F(tTt) FT EDITING : 207 R(Cgt) -> C(Tgt) FT EDITING : 208 I(atC) -> I(atT) FT EDITING : 217 P(cCt) -> L(cTt) FT EDITING : 219 P(cCa) -> L(cTa) FT EDITING : 222 P(cCc) -> L(cTc) FT EDITING : 225 P(Ccc) -> S(Tcc) FT CODON_START : 1 CL CDNALEN 723 NT; CD 1 atgtcagttt cgttattaca accttatttt tttatgtcaa agacaaaaag CD 51 ctacgcgcaa attctcattg gatctCggtt gttcttaaca gcgatggcta CD 101 ttCatttaag tcttCgggta gcaccaccag atcttcaaca aggtggaaat CD 151 tctcgtattt Cgtatgtaca tgttcctgCg gctCggatga gtatagttat CD 201 ttatatcgcg acagctataa acagttCctt gttccCatta acaaaacatc CD 251 ccctttttct tcgctcttcc ggaaccggta cagaaattgg tgctttttCt CD 301 actttgttta cgttagtgac tggggggttt Cggggaaggc ctatgtgggg CD 351 tacctttCgg gtgtgggatg ctcgtttaac ttctgtattc atcttgttCC CD 401 ttatttacct gggtgcaCtg Cgttttcaaa agcttCctgt cgaacCggct CD 451 CctatttCaa tcCgtgCtgg acCgatcgat ataccaataa taaagtCtCc CD 501 agtcaactgg tggaatacat Cgcatcaacc tgggagcatt agccgatCtg CD 551 gtacatcaat acatgttCct atgcCcattc caatcttgtc taactttgct CD 601 aacttccCct tctCtaccCg tatCttgttc gttctggaaa cacgtcttcC CD 651 tattcCatct tttcCcgaat ctCccttaac ggaagaaata gaagctcgag CD 701 aaggaatacc actaaaaacc tag FT EDITED CDNA CD 1 atgtcagttt cgttattaca accttatttt tttatgtcaa agacaaaaag CD 51 ctacgcgcaa attctcattg gatctTggtt gttcttaaca gcgatggcta CD 101 ttTatttaag tcttTgggta gcaccaccag atcttcaaca aggtggaaat CD 151 tctcgtattt Tgtatgtaca tgttcctgTg gctTggatga gtatagttat CD 201 ttatatcgcg acagctataa acagttTctt gttccTatta acaaaacatc CD 251 ccctttttct tcgctcttcc ggaaccggta cagaaattgg tgctttttTt CD 301 actttgttta cgttagtgac tggggggttt Tggggaaggc ctatgtgggg CD 351 tacctttTgg gtgtgggatg ctcgtttaac ttctgtattc atcttgttTT CD 401 ttatttacct gggtgcaTtg Tgttttcaaa agcttTctgt cgaacTggct CD 451 TctatttTaa tcTgtgTtgg acTgatcgat ataccaataa taaagtTtTc CD 501 agtcaactgg tggaatacat Tgcatcaacc tgggagcatt agccgatTtg CD 551 gtacatcaat acatgttTct atgcTcattc caatcttgtc taactttgct CD 601 aacttccTct tctTtaccTg tatTttgttc gttctggaaa cacgtcttcT CD 651 tattcTatct tttcTcgaat ctTccttaac ggaagaaata gaagctcgag CD 701 aaggaatacc actaaaaacc tag SQ SEQUENCE 241 AA; MSVSLLQPYF FMSKTKSYAQ ILIGSWLFLT AMAIYLSLWV APPDLQQGGN SRILYVHVPV AWMSIVIYIA TAINSFLFLL TKHPLFLRSS GTGTEIGAFF TLFTLVTGGF WGRPMWGTFW VWDARLTSVF ILFFIYLGAL CFQKLSVELA SILICVGLID IPIIKFSVNW WNTLHQPGSI SRFGTSIHVS MLIPILSNFA NFLFFTCILF VLETRLLILS FLESSLTEEI EAREGIPLKT * // ID X79774_1 STANDARD; PRT; 191 AA. AC X79774; DT Tue Jul 21 07:06:43 2009 DE S.tuberosum mitochondrion nad9 DNA. OS mitochondrion Solanum tuberosum (potato) OC Solanum tuberosum RN [1] RL Nucleic Acids Res. 22 (16), 3304-3311 (1994) RL PUBMED 8078764 FT Full length CDS FT GENE : nad9 FT NOTE : 27 kDa mitochondrial complex I subunit FT LOCUS_TAG : FT PROTEIN_ID : CAA56168.1 FT PROTEIN_NAME : NADH dehydrogenase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 200 - 772 FT DIRECTIONS : positive FT EDITING : 31 S(tCt) -> F(tTt) FT EDITING : 56 S(tCg) -> L(tTg) FT EDITING : 100 P(cCg) -> L(cTg) FT EDITING : 110 R(Cgg) -> W(Tgg) FT EDITING : 123 S(tCc) -> F(tTc) FT EDITING : 133 S(tCa) -> L(tTa) FT EDITING : 147 L(Ctt) -> F(Ttt) FT CODON_START : 1 CL CDNALEN 573 NT; CD 1 atggataacc aattcatttt caaatatagt tgggagactt tacccaagaa CD 51 atgggtaaaa aaaatggaaa gatcggaaca tgggaataga tCtgatacca CD 101 atacggacta cctatttcaa ttgttgtgct ttatgaaatt gcatacctat CD 151 acaagggttc aagtttCgat cgatatttgc ggagttgatt atccctctcg CD 201 aaaacaaaga tttgaagtgg tctataattt actgagtatt cggtataact CD 251 cacgcattcg tgtacaaacc agtgcagacg aagtaacacg aatatctcCg CD 301 gtagtcagtc tatttccatc agccggcCgg tgggagcgag aagtttggga CD 351 catgtttggt gtttcttCca tcaatcatcc ggatctacgc cgtatatCaa CD 401 cagattatgg tttcgagggt catccattac gaaaagacCt tcctctgagt CD 451 ggatatgtgg aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 acccattgag atgacccaag aatttcgcta tttcgatttt gctagtcctt CD 551 gggaacagcg tagcgacgga taa FT EDITED CDNA CD 1 atggataacc aattcatttt caaatatagt tgggagactt tacccaagaa CD 51 atgggtaaaa aaaatggaaa gatcggaaca tgggaataga tTtgatacca CD 101 atacggacta cctatttcaa ttgttgtgct ttatgaaatt gcatacctat CD 151 acaagggttc aagtttTgat cgatatttgc ggagttgatt atccctctcg CD 201 aaaacaaaga tttgaagtgg tctataattt actgagtatt cggtataact CD 251 cacgcattcg tgtacaaacc agtgcagacg aagtaacacg aatatctcTg CD 301 gtagtcagtc tatttccatc agccggcTgg tgggagcgag aagtttggga CD 351 catgtttggt gtttcttTca tcaatcatcc ggatctacgc cgtatatTaa CD 401 cagattatgg tttcgagggt catccattac gaaaagacTt tcctctgagt CD 451 ggatatgtgg aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 acccattgag atgacccaag aatttcgcta tttcgatttt gctagtcctt CD 551 gggaacagcg tagcgacgga taa SQ SEQUENCE 191 AA; MDNQFIFKYS WETLPKKWVK KMERSEHGNR FDTNTDYLFQ LLCFMKLHTY TRVQVLIDIC GVDYPSRKQR FEVVYNLLSI RYNSRIRVQT SADEVTRISL VVSLFPSAGW WEREVWDMFG VSFINHPDLR RILTDYGFEG HPLRKDFPLS GYVEVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG * // ID X90650_1 STANDARD; PRT; 511 AA. AC X90650; DT Tue Jul 21 07:06:43 2009 DE Hordeum vulgare ndhB gene exons 1 & 2. OS chloroplast Hordeum vulgare OC Hordeum vulgare RN [1] RL Plant Mol. Biol. 29 (4), 679-684 (1995) RL PUBMED 8541494 FT Full length CDS FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA62222.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 260/0 FT EDITING : 50 S(tCa) -> L(tTa) FT EDITING : 156 P(cCa) -> L(cTa) FT EDITING : 196 H(Cat) -> Y(Tat) FT EDITING : 204 S(tCa) -> L(tTa) FT EDITING : 235 S(tCc) -> F(tTc) FT EDITING : 246 P(cCa) -> L(cTa) FT EDITING : 277 S(tCa) -> L(tTa) FT EDITING : 279 S(tCa) -> L(tTa) FT EDITING : 494 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1533 NT; CD 1 atgatctggc atgtacagaa tgaaaacttc attctcgatt ctacgagaat CD 51 ttttatgaaa gcgtttcatt tgcttctctt caatggaagt ttcattttcc CD 101 cagaatgtat cctaattttt ggcctaattc ttcttctgat gatcgattCa CD 151 acctctgatc aaaaagatag accttggttc tatttcatct cttcaacaag CD 201 tttagtaata agcataacgg ccctattgtt ccgatggaga gaagaaccta CD 251 taattagctt ttcgggaaat ttccaaacga acaatttcaa cgaaatcttt CD 301 caatttctca ttttattatg ttcaacttta tgtattcctc tatccgtaga CD 351 gtacattgaa tgtacagaaa tggctataac agagtttctg ttattcgtat CD 401 taacagctac tctaggggga atgtttttat gtggtgctaa cgatttaata CD 451 actatctttg tagctcCaga atgtttcagt ttatgttcct acctattgtc CD 501 tggatatacc aagagagatc tacggtctaa tgaggctact atgaaatatt CD 551 tactcatggg tggggcaagc tcttctattc tggttCatgg tttctcttgg CD 601 ctatatggtt Catctggggg ggagatcgag cttcaagaaa ttgtgaacgg CD 651 tcttatcaat acacaaatgt ataactcccc aggaatttca attgcgctta CD 701 tatCcatcac tgtaggactt gggttcaagc tttcccCagc cccttttcat CD 751 caatggactc ctgacgtcta cgaaggatcc cccactccag tcgttgcttt CD 801 tctttctgtt acttcgaaag tagctgcttC agcttCagcc acgcgaattc CD 851 tcgatattcc tttttatttc tcatcaaacg aatggcatct tcttctggaa CD 901 atcctagcta ttcttagcat gattttgggg aatctccttg ctattactca CD 951 aacaagcatg aaacgtatgc ttgcatattc gtccataggg caaatcggat CD 1001 atgtaattat tggaataatt gttggagact caaatgatgg atatgcaagc CD 1051 atgataactt atatgctgtt ctatatctcc atgaatctag gaacttttgc CD 1101 ttgcattgta ttatttggtc tacgtaccgg aactgataac attcgagatt CD 1151 atgcaggatt atacatgaaa gatccttttt tggctctctc tttagcccta CD 1201 tgtctcttat ccctaggagg ccttcctcca ctagcaggtt tcttcggaaa CD 1251 actctatcta ttctggtgtg gatggcaagc aggcctatat ttcttggttt CD 1301 caataggact ccttacgagc gttctttcta tctactatta tctaaaaata CD 1351 atcaagttat taatgactgg acgaaaccaa gaaataaccc cttatgtgcg CD 1401 aaattataga agatcccctt taagatcaaa caattccatc gaattgagta CD 1451 tgactgtatg tgtgatagca tctactatac Caggaatatc aatgaacccc CD 1501 attcttgcaa ttgctcagga taccctcttt tag FT EDITED CDNA CD 1 atgatctggc atgtacagaa tgaaaacttc attctcgatt ctacgagaat CD 51 ttttatgaaa gcgtttcatt tgcttctctt caatggaagt ttcattttcc CD 101 cagaatgtat cctaattttt ggcctaattc ttcttctgat gatcgattTa CD 151 acctctgatc aaaaagatag accttggttc tatttcatct cttcaacaag CD 201 tttagtaata agcataacgg ccctattgtt ccgatggaga gaagaaccta CD 251 taattagctt ttcgggaaat ttccaaacga acaatttcaa cgaaatcttt CD 301 caatttctca ttttattatg ttcaacttta tgtattcctc tatccgtaga CD 351 gtacattgaa tgtacagaaa tggctataac agagtttctg ttattcgtat CD 401 taacagctac tctaggggga atgtttttat gtggtgctaa cgatttaata CD 451 actatctttg tagctcTaga atgtttcagt ttatgttcct acctattgtc CD 501 tggatatacc aagagagatc tacggtctaa tgaggctact atgaaatatt CD 551 tactcatggg tggggcaagc tcttctattc tggttTatgg tttctcttgg CD 601 ctatatggtt Tatctggggg ggagatcgag cttcaagaaa ttgtgaacgg CD 651 tcttatcaat acacaaatgt ataactcccc aggaatttca attgcgctta CD 701 tatTcatcac tgtaggactt gggttcaagc tttcccTagc cccttttcat CD 751 caatggactc ctgacgtcta cgaaggatcc cccactccag tcgttgcttt CD 801 tctttctgtt acttcgaaag tagctgcttT agcttTagcc acgcgaattc CD 851 tcgatattcc tttttatttc tcatcaaacg aatggcatct tcttctggaa CD 901 atcctagcta ttcttagcat gattttgggg aatctccttg ctattactca CD 951 aacaagcatg aaacgtatgc ttgcatattc gtccataggg caaatcggat CD 1001 atgtaattat tggaataatt gttggagact caaatgatgg atatgcaagc CD 1051 atgataactt atatgctgtt ctatatctcc atgaatctag gaacttttgc CD 1101 ttgcattgta ttatttggtc tacgtaccgg aactgataac attcgagatt CD 1151 atgcaggatt atacatgaaa gatccttttt tggctctctc tttagcccta CD 1201 tgtctcttat ccctaggagg ccttcctcca ctagcaggtt tcttcggaaa CD 1251 actctatcta ttctggtgtg gatggcaagc aggcctatat ttcttggttt CD 1301 caataggact ccttacgagc gttctttcta tctactatta tctaaaaata CD 1351 atcaagttat taatgactgg acgaaaccaa gaaataaccc cttatgtgcg CD 1401 aaattataga agatcccctt taagatcaaa caattccatc gaattgagta CD 1451 tgactgtatg tgtgatagca tctactatac Taggaatatc aatgaacccc CD 1501 attcttgcaa ttgctcagga taccctcttt tag SQ SEQUENCE 511 AA; MIWHVQNENF ILDSTRIFMK AFHLLLFNGS FIFPECILIF GLILLLMIDL TSDQKDRPWF YFISSTSLVI SITALLFRWR EEPIISFSGN FQTNNFNEIF QFLILLCSTL CIPLSVEYIE CTEMAITEFL LFVLTATLGG MFLCGANDLI TIFVALECFS LCSYLLSGYT KRDLRSNEAT MKYLLMGGAS SSILVYGFSW LYGLSGGEIE LQEIVNGLIN TQMYNSPGIS IALIFITVGL GFKLSLAPFH QWTPDVYEGS PTPVVAFLSV TSKVAALALA TRILDIPFYF SSNEWHLLLE ILAILSMILG NLLAITQTSM KRMLAYSSIG QIGYVIIGII VGDSNDGYAS MITYMLFYIS MNLGTFACIV LFGLRTGTDN IRDYAGLYMK DPFLALSLAL CLLSLGGLPP LAGFFGKLYL FWCGWQAGLY FLVSIGLLTS VLSIYYYLKI IKLLMTGRNQ EITPYVRNYR RSPLRSNNSI ELSMTVCVIA STILGISMNP ILAIAQDTLF * // ID X92721_1 STANDARD; PRT; 127 AA. AC X92721; DT Tue Jul 21 07:06:43 2009 DE A.crispulus cox3 gene. OS mitochondrion Anthoceros crispulus OC Anthoceros crispulus RN [1] RL EMBO J. 15 (6), 1403-1411 (1996) RL PUBMED 8635473 FT N-terminal not determined FT C-terminal not determined FT GENE : cox3 FT NOTE : subunit III FT LOCUS_TAG : FT PROTEIN_ID : CAA63381.1 FT PROTEIN_NAME : cytochrome oxidase FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 381 FT DIRECTIONS : positive FT EDITING : 5 L(Ctg) -> L(Ttg) FT EDITING : 12 I(atT) -> I(atC) FT EDITING : 44 R(cgC) -> R(cgT) FT EDITING : 45 D(gaT) -> D(gaC) FT EDITING : 46 V(gtT) -> V(gtC) FT EDITING : 65 R(cgC) -> R(cgT) FT EDITING : 88 H(caT) -> H(caC) FT EDITING : 102 P(ccC) -> P(ccT) FT EDITING : 124 S(tCa) -> L(tTa) FT EDITING : 127 A(gcT) -> A(gcC) FT CODON_START : 1 CL CDNALEN 381 NT; CD 1 attttgggtt caCtgggagc tttggcaagc accatTggtg gtgttatgta CD 51 catgcattct tttacgggag gtggaacact tcttagttta ggcttaggaa CD 101 tgatcctata taccatgttt gtatggtggc gCgaTgtTac atgtgaatct CD 151 acttacgaag gacatcatac atttgtggtc caattaggac ttcgCtatgg CD 201 tatgattttg tttatcgtgt ctgaagtcat gtttttttta gctttttttt CD 251 gggctttctt tcaTtcttct ttggcaccca cggtagaaat tggagctatt CD 301 tggccCccta agggaattga tgtgttagat ccttggggaa ttccttttct CD 351 aaatacactt attttacttt Catcgggagc T FT EDITED CDNA CD 1 attttgggtt caTtgggagc tttggcaagc accatCggtg gtgttatgta CD 51 catgcattct tttacgggag gtggaacact tcttagttta ggcttaggaa CD 101 tgatcctata taccatgttt gtatggtggc gTgaCgtCac atgtgaatct CD 151 acttacgaag gacatcatac atttgtggtc caattaggac ttcgTtatgg CD 201 tatgattttg tttatcgtgt ctgaagtcat gtttttttta gctttttttt CD 251 gggctttctt tcaCtcttct ttggcaccca cggtagaaat tggagctatt CD 301 tggccTccta agggaattga tgtgttagat ccttggggaa ttccttttct CD 351 aaatacactt attttacttt Tatcgggagc C SQ SEQUENCE 127 AA; ILGSLGALAS TIGGVMYMHS FTGGGTLLSL GLGMILYTMF VWWRDVTCES TYEGHHTFVV QLGLRYGMIL FIVSEVMFFL AFFWAFFHSS LAPTVEIGAI WPPKGIDVLD PWGIPFLNTL ILLLSGA // ID X92725_1 STANDARD; PRT; 83 AA. AC X92725; DT Tue Jul 21 07:06:43 2009 DE O.claytoniana cox3 gene. OS mitochondrion Osmunda claytoniana OC Osmunda claytoniana RN [1] RL EMBO J. 15 (6), 1403-1411 (1996) RL PUBMED 8635473 FT N-terminal not determined FT C-terminal not determined FT GENE : cox3 FT NOTE : subunit III FT LOCUS_TAG : FT PROTEIN_ID : CAA63384.1 FT PROTEIN_NAME : cytochrome oxidase FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 248 FT DIRECTIONS : positive FT EDITING : 21 R(Cgg) -> W(Tgg) FT EDITING : 24 P(cCa) -> L(cTa) FT EDITING : 27 T(acC) -> T(acT) FT EDITING : 42 P(Ccc) -> S(Tcc) FT EDITING : 49 T(acC) -> T(acT) FT EDITING : 53 A(gcC) -> A(gcT) FT EDITING : 57 Y(Tat) -> H(Cat) FT EDITING : 60 Y(Tat) -> H(Cat) FT EDITING : 68 S(tCa) -> L(tTa) FT CODON_START : 2 CL CDNALEN 248 NT; CD 1 tcatcatgct atactcgcag gtctaaaaga acaagcggtt tacgctttag CD 51 tagctaccgt tCggctggct cCagtcttca cCgggtttca aggaatagaa CD 101 tattacgaag caccttttac cattCccgat ggtatttatg gttctacCtt CD 151 tttcttagcC actgggtttT atgggtttTa tgtcattata gggactattt CD 201 tctCaataat atgcggtatt cgtgaatata tgggccattt tagccctt FT EDITED CDNA CD 1 tcatcatgct atactcgcag gtctaaaaga acaagcggtt tacgctttag CD 51 tagctaccgt tTggctggct cTagtcttca cTgggtttca aggaatagaa CD 101 tattacgaag caccttttac cattTccgat ggtatttatg gttctacTtt CD 151 tttcttagcT actgggtttC atgggtttCa tgtcattata gggactattt CD 201 tctTaataat atgcggtatt cgtgaatata tgggccattt tagccctt SQ SEQUENCE 83 AA; HHAILAGLKE QAVYALVATV WLALVFTGFQ GIEYYEAPFT ISDGIYGSTF FLATGFHGFH VIIGTIFLII CGIREYMGHF SPX // ID X92731_1 STANDARD; PRT; 127 AA. AC X92731; DT Tue Jul 21 07:06:43 2009 DE A.palmiformis mitochondrial cox3 gene. OS mitochondrion Angiopteris palmiformis OC Angiopteris palmiformis RN [1] RL EMBO J. 15 (6), 1403-1411 (1996) RL PUBMED 8635473 FT N-terminal not determined FT C-terminal not determined FT GENE : coxIII FT NOTE : subunit III FT LOCUS_TAG : FT PROTEIN_ID : CAA63393.1 FT PROTEIN_NAME : cytochrome oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 381 FT DIRECTIONS : positive FT EDITING : 82 S(tCc) -> F(tTc) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 99 A(gcC) -> A(gcT) FT EDITING : 120 P(cCt) -> L(cTt) FT CODON_START : 1 CL CDNALEN 381 NT; CD 1 cttttggggt cactgggagc tttggccagc accatgggtg gtgtgatgta CD 51 catgcattca ttcacgggag gtgccacact tcttagttta ggcttgggat CD 101 taatatcata taccatgttt gtatggtggc gtgatgttat acgtgaatcc CD 151 acttacgaag gacatcatac caaagtggta caattaggac ttcgctacgg CD 201 ttttcttctg ttcatcgtct cggagggcat gcttttctta gcttCctttC CD 251 gggctttttt ccattcctcc ctggcaccta cggtagagat cggagcCatt CD 301 tggcccccca aaggaattga ggttttagat ccctggggaa ttccttttct CD 351 aaatacccCt attctccttt catctggagc t FT EDITED CDNA CD 1 cttttggggt cactgggagc tttggccagc accatgggtg gtgtgatgta CD 51 catgcattca ttcacgggag gtgccacact tcttagttta ggcttgggat CD 101 taatatcata taccatgttt gtatggtggc gtgatgttat acgtgaatcc CD 151 acttacgaag gacatcatac caaagtggta caattaggac ttcgctacgg CD 201 ttttcttctg ttcatcgtct cggagggcat gcttttctta gcttTctttT CD 251 gggctttttt ccattcctcc ctggcaccta cggtagagat cggagcTatt CD 301 tggcccccca aaggaattga ggttttagat ccctggggaa ttccttttct CD 351 aaatacccTt attctccttt catctggagc t SQ SEQUENCE 127 AA; LLGSLGALAS TMGGVMYMHS FTGGATLLSL GLGLISYTMF VWWRDVIRES TYEGHHTKVV QLGLRYGFLL FIVSEGMLFL AFFWAFFHSS LAPTVEIGAI WPPKGIEVLD PWGIPFLNTL ILLSSGA // ID X92733_1 STANDARD; PRT; 127 AA. AC X92733; DT Tue Jul 21 07:06:43 2009 DE C.purpureus mitochondrial cox3 gene. OS mitochondrion Ceratodon purpureus OC Ceratodon purpureus RN [1] RL EMBO J. 15 (6), 1403-1411 (1996) RL PUBMED 8635473 FT N-terminal not determined FT C-terminal not determined FT GENE : coxIII FT NOTE : subunit III FT LOCUS_TAG : FT PROTEIN_ID : CAA63394.1 FT PROTEIN_NAME : cytochrome oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 381 FT DIRECTIONS : positive FT EDITING : 101 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 381 NT; CD 1 cttttaggtt cattgggagc tttggcaagc accattggtg gtgttatgta CD 51 catgcactct tttacgggag gtggaacact tcttagctta ggcttgggaa CD 101 tgatcctata tactatgttt gtatggtggc gcgatgttat acgtgaatcc CD 151 acttacgaag gacatcatac atttgtggtc caattaggac ttcgctatgg CD 201 tatgattttg ttcatcgtgt ctgaagtcat gtttttttta gctttttttt CD 251 gggctttttt tcattcttct ttggcaccta cggtagaaat tggagctatt CD 301 Cggcccccca aaggaattga tgtgttaaat ccttggggaa ttccttttct CD 351 aaataccctt attctacttt catctggagc t FT EDITED CDNA CD 1 cttttaggtt cattgggagc tttggcaagc accattggtg gtgttatgta CD 51 catgcactct tttacgggag gtggaacact tcttagctta ggcttgggaa CD 101 tgatcctata tactatgttt gtatggtggc gcgatgttat acgtgaatcc CD 151 acttacgaag gacatcatac atttgtggtc caattaggac ttcgctatgg CD 201 tatgattttg ttcatcgtgt ctgaagtcat gtttttttta gctttttttt CD 251 gggctttttt tcattcttct ttggcaccta cggtagaaat tggagctatt CD 301 Tggcccccca aaggaattga tgtgttaaat ccttggggaa ttccttttct CD 351 aaataccctt attctacttt catctggagc t SQ SEQUENCE 127 AA; LLGSLGALAS TIGGVMYMHS FTGGGTLLSL GLGMILYTMF VWWRDVIRES TYEGHHTFVV QLGLRYGMIL FIVSEVMFFL AFFWAFFHSS LAPTVEIGAI WPPKGIDVLN PWGIPFLNTL ILLSSGA // ID X92735_1 STANDARD; PRT; 127 AA. AC X92735; DT Tue Jul 21 07:06:43 2009 DE E.gerardiana mitochondrial cox3 gene. OS mitochondrion Ephedra gerardiana OC Ephedra gerardiana RN [1] RL EMBO J. 15 (6), 1403-1411 (1996) RL PUBMED 8635473 FT N-terminal not determined FT C-terminal not determined FT GENE : coxIII FT NOTE : subunit III FT LOCUS_TAG : FT PROTEIN_ID : CAA63396.1 FT PROTEIN_NAME : cytochrome oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 381 FT DIRECTIONS : positive FT EDITING : 32 S(tCt) -> F(tTt) FT EDITING : 36 P(cCa) -> L(cTa) FT EDITING : 38 S(tcC) -> S(tcT) FT EDITING : 59 V(gtC) -> V(gtT) FT EDITING : 64 P(cCt) -> L(cTt) FT EDITING : 70 P(cCg) -> L(cTg) FT EDITING : 72 I(atC) -> I(atT) FT EDITING : 79 L(Ctc) -> F(Ttc) FT EDITING : 82 L(Ctt) -> F(Ttt) FT EDITING : 83 L(Ctt) -> F(Ttt) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 86 S(tCt) -> F(tTt) FT EDITING : 91 S(tCg) -> L(tTg) FT EDITING : 120 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 381 NT; CD 1 atagcaggtt cactcggagc tttagcaacc acagtaggag gtgttatgtt CD 51 catgcactcg tttaacgggg gtgaacaact actccgtttg ggctCtatct CD 101 tcctacCata ttcCatgtgc ttatggtggc gcgatgtgtt acgtgaatcc CD 151 acgtttgagg gacatcatac ccaagtCgta caatatggac Ctcgatatgg CD 201 ttttattcCg tttatCgtat cggaggtaat gttcCtcttc gctCttCttC CD 251 gggcttCttt ccattcttct tCggcaccag cggttgagat cggaggtatc CD 301 tggcccccta aaggtcttgg tgtgttaaac ccaggggaaa taccgttatt CD 351 gaatacccCg attctacttt catccggagc t FT EDITED CDNA CD 1 atagcaggtt cactcggagc tttagcaacc acagtaggag gtgttatgtt CD 51 catgcactcg tttaacgggg gtgaacaact actccgtttg ggctTtatct CD 101 tcctacTata ttcTatgtgc ttatggtggc gcgatgtgtt acgtgaatcc CD 151 acgtttgagg gacatcatac ccaagtTgta caatatggac Ttcgatatgg CD 201 ttttattcTg tttatTgtat cggaggtaat gttcTtcttc gctTttTttT CD 251 gggcttTttt ccattcttct tTggcaccag cggttgagat cggaggtatc CD 301 tggcccccta aaggtcttgg tgtgttaaac ccaggggaaa taccgttatt CD 351 gaatacccTg attctacttt catccggagc t SQ SEQUENCE 127 AA; IAGSLGALAT TVGGVMFMHS FNGGEQLLRL GFIFLLYSMC LWWRDVLRES TFEGHHTQVV QYGLRYGFIL FIVSEVMFFF AFFWAFFHSS LAPAVEIGGI WPPKGLGVLN PGEIPLLNTL ILLSSGA // ID X92736_1 STANDARD; PRT; 127 AA. AC X92736; DT Tue Jul 21 07:06:43 2009 DE I.lacustris mitochondrial cox3 gene. OS mitochondrion Isoetes lacustris OC Isoetes lacustris RN [1] RL EMBO J. 15 (6), 1403-1411 (1996) RL PUBMED 8635473 FT N-terminal not determined FT C-terminal not determined FT GENE : coxIII FT NOTE : subunit III FT LOCUS_TAG : FT PROTEIN_ID : CAA63397.1 FT PROTEIN_NAME : cytochrome oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 381 FT DIRECTIONS : positive FT EDITING : 5 P(CCg) -> L(TTg) FT EDITING : 7 A(gcC) -> A(gcT) FT EDITING : 8 P(cCg) -> L(cTg) FT EDITING : 16 T(aCg) -> M(aTg) FT EDITING : 18 T(aCg) -> M(aTg) FT EDITING : 21 S(tCt) -> F(tTt) FT EDITING : 27 P(cCt) -> L(cTt) FT EDITING : 28 P(cCt) -> L(cTt) FT EDITING : 32 S(tCg) -> L(tTg) FT EDITING : 34 T(aCg) -> M(aTg) FT EDITING : 35 I(atC) -> I(atT) FT EDITING : 38 T(acC) -> T(acT) FT EDITING : 39 T(aCg) -> M(aTg) FT EDITING : 40 S(tCC) -> F(tTT) FT EDITING : 41 P(CCa) -> L(TTa) FT EDITING : 42 R(Cgg) -> W(Tgg) FT EDITING : 43 R(Cgg) -> W(Tgg) FT EDITING : 64 P(cCt) -> L(cTt) FT EDITING : 66 Y(taC) -> Y(taT) FT EDITING : 68 S(tCc) -> F(tTc) FT EDITING : 70 P(CCg) -> L(TTg) FT EDITING : 71 S(tCc) -> F(tTc) FT EDITING : 74 P(Cca) -> S(Tca) FT EDITING : 79 P(CCt) -> F(TTt) FT EDITING : 80 P(cCa) -> L(cTa) FT EDITING : 82 S(tCt) -> F(tTt) FT EDITING : 83 P(CCt) -> F(TTt) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 86 P(CCt) -> F(TTt) FT EDITING : 87 S(tCt) -> F(tTt) FT EDITING : 89 P(Cct) -> S(Tct) FT EDITING : 90 P(CcC) -> S(TcT) FT EDITING : 91 S(tCg) -> L(tTg) FT EDITING : 93 P(ccC) -> P(ccT) FT EDITING : 95 A(gCa) -> V(gTa) FT EDITING : 101 R(Cgg) -> W(Tgg) FT EDITING : 117 P(cCa) -> L(cTa) FT EDITING : 120 P(cCt) -> L(cTt) FT EDITING : 122 P(cCa) -> L(cTa) FT EDITING : 124 P(Cca) -> S(Tca) FT CODON_START : 1 CL CDNALEN 381 NT; CD 1 attctgggtt caCCgggagc CcCggcgagc accacgggcg gtgttaCgta CD 51 caCgcacttc tCtacgggag gcggaatgcC tcCtggttca ggctCgggaa CD 101 CgatCttata tacCaCgtCC CCaCggCggc gcgatgttat acgtgaatct CD 151 acccacgaag gacatcacac caaaatggta caattaggac CtcgctaCgg CD 201 ttCcattCCg tCcatcgtcC cagaggtcat gtttCCtcCa gcctCtCCtC CD 251 gggctCCttC tcatCctCcC tCggcaccCa cagCagagat tggagctatt CD 301 Cggcccccaa aaggaattga ggtgttagat ccttggggga ttcctttccC CD 351 aaatactcCt attcCacttC catctggagc t FT EDITED CDNA CD 1 attctgggtt caTTgggagc TcTggcgagc accacgggcg gtgttaTgta CD 51 caTgcacttc tTtacgggag gcggaatgcT tcTtggttca ggctTgggaa CD 101 TgatTttata tacTaTgtTT TTaTggTggc gcgatgttat acgtgaatct CD 151 acccacgaag gacatcacac caaaatggta caattaggac TtcgctaTgg CD 201 ttTcattTTg tTcatcgtcT cagaggtcat gtttTTtcTa gcctTtTTtT CD 251 gggctTTttT tcatTctTcT tTggcaccTa cagTagagat tggagctatt CD 301 Tggcccccaa aaggaattga ggtgttagat ccttggggga ttcctttccT CD 351 aaatactcTt attcTacttT catctggagc t SQ SEQUENCE 127 AA; ILGSLGALAS TTGGVMYMHF FTGGGMLLGS GLGMILYTMF LWWRDVIRES THEGHHTKMV QLGLRYGFIL FIVSEVMFFL AFFWAFFHSS LAPTVEIGAI WPPKGIEVLD PWGIPFLNTL ILLSSGA // ID X92737_1 STANDARD; PRT; 127 AA. AC X92737; DT Tue Jul 21 07:06:43 2009 DE T.pellucida mitochondrial cox3 gene. OS mitochondrion Tetraphis pellucida OC Tetraphis pellucida RN [1] RL EMBO J. 15 (6), 1403-1411 (1996) RL PUBMED 8635473 FT N-terminal not determined FT C-terminal not determined FT GENE : coxIII FT NOTE : subunit III FT LOCUS_TAG : FT PROTEIN_ID : CAA63398.1 FT PROTEIN_NAME : cytochrome oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 381 FT DIRECTIONS : positive FT EDITING : 101 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 381 NT; CD 1 cttttgggtt cattgggagc tttggcaagc accattggtg gtgttatgta CD 51 catgcactct tttacgggag gtggaacact tcttagttta ggcttgggaa CD 101 tgatcttata tactatgttt gtatggtggc gcgatgttat acgtgaatcc CD 151 acttacgaag gacatcatac atttgtggtc caattaggac tccgctatgg CD 201 tatgattttg ttcatcgtgt ctgaagtcat gtttttttta gctttctttt CD 251 ggggtttttt tcattcttct ttggcaccta cggtagagat tggagctatt CD 301 Cggcccccca aaggaattga tgtgttaaat ccttggggaa ttccttttct CD 351 aaataccctt attctacttt catctggagc t FT EDITED CDNA CD 1 cttttgggtt cattgggagc tttggcaagc accattggtg gtgttatgta CD 51 catgcactct tttacgggag gtggaacact tcttagttta ggcttgggaa CD 101 tgatcttata tactatgttt gtatggtggc gcgatgttat acgtgaatcc CD 151 acttacgaag gacatcatac atttgtggtc caattaggac tccgctatgg CD 201 tatgattttg ttcatcgtgt ctgaagtcat gtttttttta gctttctttt CD 251 ggggtttttt tcattcttct ttggcaccta cggtagagat tggagctatt CD 301 Tggcccccca aaggaattga tgtgttaaat ccttggggaa ttccttttct CD 351 aaataccctt attctacttt catctggagc t SQ SEQUENCE 127 AA; LLGSLGALAS TIGGVMYMHS FTGGGTLLSL GLGMILYTMF VWWRDVIRES TYEGHHTFVV QLGLRYGMIL FIVSEVMFFL AFFWGFFHSS LAPTVEIGAI WPPKGIDVLN PWGIPFLNTL ILLSSGA // ID X92738_1 STANDARD; PRT; 127 AA. AC X92738; DT Tue Jul 21 07:06:43 2009 DE T.elongata mitochondrial cox3 gene. OS mitochondrion Tmesipteris elongata OC Tmesipteris elongata RN [1] RL EMBO J. 15 (6), 1403-1411 (1996) RL PUBMED 8635473 FT N-terminal not determined FT C-terminal not determined FT GENE : coxIII FT NOTE : subunit III FT LOCUS_TAG : FT PROTEIN_ID : CAA63399.1 FT PROTEIN_NAME : cytochrome oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 381 FT DIRECTIONS : positive FT EDITING : 20 P(Cca) -> S(Tca) FT EDITING : 32 S(tCg) -> L(tTg) FT EDITING : 47 P(cCa) -> L(cTa) FT EDITING : 80 S(tCa) -> L(tTa) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 90 P(Cct) -> S(Tct) FT EDITING : 91 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 381 NT; CD 1 cttttggggt cactgggagc tttggccagc accattggtg gtgttatgta CD 51 catgcatCca ttcgcgggag gtgcaacact tctaagttca ggctCgggat CD 101 tgatcttata taccatgttt gtatggtggc gcgatgttcC acgtgaatcc CD 151 acctacgaag gacatcatac caaagtggta caattaggac ttcgctacgg CD 201 ttttactctg tttatcgtct ccgaggtcat gtttttctCa gctttctttC CD 251 gggccttttt tcattctCct tCggcaccta cggtagagat cggagctatt CD 301 tggccccccg aaggaattga ggttttagac ccttggggaa ttccttttct CD 351 aaataccctt attctacttt catccggagc t FT EDITED CDNA CD 1 cttttggggt cactgggagc tttggccagc accattggtg gtgttatgta CD 51 catgcatTca ttcgcgggag gtgcaacact tctaagttca ggctTgggat CD 101 tgatcttata taccatgttt gtatggtggc gcgatgttcT acgtgaatcc CD 151 acctacgaag gacatcatac caaagtggta caattaggac ttcgctacgg CD 201 ttttactctg tttatcgtct ccgaggtcat gtttttctTa gctttctttT CD 251 gggccttttt tcattctTct tTggcaccta cggtagagat cggagctatt CD 301 tggccccccg aaggaattga ggttttagac ccttggggaa ttccttttct CD 351 aaataccctt attctacttt catccggagc t SQ SEQUENCE 127 AA; LLGSLGALAS TIGGVMYMHS FAGGATLLSS GLGLILYTMF VWWRDVLRES TYEGHHTKVV QLGLRYGFTL FIVSEVMFFL AFFWAFFHSS LAPTVEIGAI WPPEGIEVLD PWGIPFLNTL ILLSSGA // ID X92739_1 STANDARD; PRT; 127 AA. AC X92739; DT Tue Jul 21 07:06:43 2009 DE O.petiolatum mitochondrial cox3 gene. OS mitochondrion Ophioglossum petiolatum OC Ophioglossum petiolatum RN [1] RL EMBO J. 15 (6), 1403-1411 (1996) RL PUBMED 8635473 FT N-terminal not determined FT C-terminal not determined FT GENE : coxIII FT NOTE : subunit III FT LOCUS_TAG : FT PROTEIN_ID : CAA63400.1 FT PROTEIN_NAME : cytochrome oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 381 FT DIRECTIONS : positive FT EDITING : 28 P(cCt) -> L(cTt) FT EDITING : 64 P(cCt) -> L(cTt) FT EDITING : 68 S(tCt) -> F(tTt) FT EDITING : 69 P(cCt) -> L(cTt) FT EDITING : 70 S(tCg) -> L(tTg) FT EDITING : 72 T(aCC) -> I(aTT) FT EDITING : 79 L(Ctt) -> F(Ttt) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 86 S(tCc) -> F(tTc) FT EDITING : 97 I(atC) -> I(atT) FT EDITING : 101 R(Cgg) -> W(Tgg) FT EDITING : 117 P(cCa) -> L(cTa) FT EDITING : 122 L(Cta) -> L(Tta) FT EDITING : 124 P(Cca) -> S(Tca) FT EDITING : 125 S(tcC) -> S(tcT) FT CODON_START : 1 CL CDNALEN 381 NT; CD 1 cttttggggt cactgggagc tttggccagc acccttggtg gtgttatgta CD 51 catgcattca tttacaggag gtgcaacact tcCtggttca ggcttgggat CD 101 taatcttata taccatgttt gtatggtggc gcgatgtttt acgtgaatcc CD 151 acttacgaag ggcatcatac caaagtggta caatcaggac Ctcgtgtagg CD 201 ttCtcCttCg ttcaCCgtct ccgaggtcat gtttCtttta gctttctttC CD 251 gggcttCctt tcattcttct ttggcaacta cggtagagat Cggagctatt CD 301 Cggcccccca aaggaattga ggttttagat ccttggggaa ttcctttccC CD 351 aaataccctt attCtactcC catcCggagc t FT EDITED CDNA CD 1 cttttggggt cactgggagc tttggccagc acccttggtg gtgttatgta CD 51 catgcattca tttacaggag gtgcaacact tcTtggttca ggcttgggat CD 101 taatcttata taccatgttt gtatggtggc gcgatgtttt acgtgaatcc CD 151 acttacgaag ggcatcatac caaagtggta caatcaggac Ttcgtgtagg CD 201 ttTtcTttTg ttcaTTgtct ccgaggtcat gtttTtttta gctttctttT CD 251 gggcttTctt tcattcttct ttggcaacta cggtagagat Tggagctatt CD 301 Tggcccccca aaggaattga ggttttagat ccttggggaa ttcctttccT CD 351 aaataccctt attTtactcT catcTggagc t SQ SEQUENCE 127 AA; LLGSLGALAS TLGGVMYMHS FTGGATLLGS GLGLILYTMF VWWRDVLRES TYEGHHTKVV QSGLRVGFLL FIVSEVMFFL AFFWAFFHSS LATTVEIGAI WPPKGIEVLD PWGIPFLNTL ILLSSGA // ID X92740_1 STANDARD; PRT; 127 AA. AC X92740; DT Tue Jul 21 07:06:43 2009 DE P.epiphylla mitochondrial cox3 gene (exon 1 and 2). OS mitochondrion Pellia epiphylla OC Pellia epiphylla RN [1] RL EMBO J. 15 (6), 1403-1411 (1996) RL PUBMED 8635473 FT N-terminal not determined FT C-terminal not determined FT GENE : coxIII FT NOTE : subunit III FT LOCUS_TAG : FT PROTEIN_ID : CAA63401.1 FT PROTEIN_NAME : cytochrome oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 40/0 FT EDITING : 19 H(caT) -> H(caC) FT EDITING : 52 Y(taC) -> Y(taT) FT EDITING : 64 P(cCt) -> L(cTt) FT EDITING : 71 S(tCc) -> F(tTc) FT EDITING : 80 S(tCa) -> L(tTa) FT EDITING : 82 S(tCc) -> F(tTc) FT EDITING : 83 L(Ctc) -> F(Ttc) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 87 S(tCC) -> F(tTT) FT EDITING : 117 P(cCa) -> L(cTa) FT EDITING : 120 P(cCt) -> L(cTt) FT EDITING : 124 P(Cca) -> S(Tca) FT CODON_START : 1 CL CDNALEN 381 NT; CD 1 ctcttgggtt cactcggagc tttggcaagc actattggtg gtgttatgta CD 51 catgcaTtct ttcacgggag gcggaacact tctttgttta ggcttgggaa CD 101 tgatcttata taccatgttt gtatggtggc gcgatgttat acgtgaatcc CD 151 acctaCgaag gacatcatac atttgtggtc caattaggac Ctcgctatgg CD 201 tatgattctt tCcatcgttt ctgaagtcat gtttttttCa gcttCcCtcC CD 251 gggctttttC Ccattcttct ttggcaccta cggttgagat cggagctatc CD 301 tggcccccaa aaggtatttc tgttttagat ccttggggaa ttccttttcC CD 351 aaatacccCt attctacttC catctggagc t FT EDITED CDNA CD 1 ctcttgggtt cactcggagc tttggcaagc actattggtg gtgttatgta CD 51 catgcaCtct ttcacgggag gcggaacact tctttgttta ggcttgggaa CD 101 tgatcttata taccatgttt gtatggtggc gcgatgttat acgtgaatcc CD 151 acctaTgaag gacatcatac atttgtggtc caattaggac Ttcgctatgg CD 201 tatgattctt tTcatcgttt ctgaagtcat gtttttttTa gcttTcTtcT CD 251 gggctttttT Tcattcttct ttggcaccta cggttgagat cggagctatc CD 301 tggcccccaa aaggtatttc tgttttagat ccttggggaa ttccttttcT CD 351 aaatacccTt attctacttT catctggagc t SQ SEQUENCE 127 AA; LLGSLGALAS TIGGVMYMHS FTGGGTLLCL GLGMILYTMF VWWRDVIRES TYEGHHTFVV QLGLRYGMIL FIVSEVMFFL AFFWAFFHSS LAPTVEIGAI WPPKGISVLD PWGIPFLNTL ILLSSGA // ID X92741_1 STANDARD; PRT; 85 AA. AC X92741; DT Tue Jul 21 07:06:43 2009 DE P.epiphylla mitochondrial cox3 gene (exon 2 and 3). OS mitochondrion Pellia epiphylla OC Pellia epiphylla RN [1] RL EMBO J. 15 (6), 1403-1411 (1996) RL PUBMED 8635473 FT N-terminal not determined FT C-terminal not determined FT GENE : coxIII FT NOTE : subunit III FT LOCUS_TAG : FT PROTEIN_ID : CAA63402.1 FT PROTEIN_NAME : cytochrome oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 61/2 FT EDITING : 18 S(tCa) -> L(tTa) FT EDITING : 52 S(tCt) -> F(tTt) FT EDITING : 54 S(tCa) -> L(tTa) FT EDITING : 69 S(tCC) -> F(tTT) FT EDITING : 70 S(tCa) -> L(tTa) FT CODON_START : 2 CL CDNALEN 254 NT; CD 1 tcatcatgct atactcgcag gtggttgttt tttaaaacaa gcagtttacg CD 51 cttCaatagc taccgttttc ctggctctag tctttactgg gtttcaagga CD 101 attgaatacg tagaggcccc cttcactatt tccgatggaa tttatggttc CD 151 tacgtCtttt tCagctacgg ggtttcatgg ttttcatgtc attataggta CD 201 ctatttCCtC aataatatgt gggattcgtc aatatctggg tcattttacc CD 251 ccaa FT EDITED CDNA CD 1 tcatcatgct atactcgcag gtggttgttt tttaaaacaa gcagtttacg CD 51 cttTaatagc taccgttttc ctggctctag tctttactgg gtttcaagga CD 101 attgaatacg tagaggcccc cttcactatt tccgatggaa tttatggttc CD 151 tacgtTtttt tTagctacgg ggtttcatgg ttttcatgtc attataggta CD 201 ctatttTTtT aataatatgt gggattcgtc aatatctggg tcattttacc CD 251 ccaa SQ SEQUENCE 85 AA; HHAILAGGCF LKQAVYALIA TVFLALVFTG FQGIEYVEAP FTISDGIYGS TFFLATGFHG FHVIIGTIFL IICGIRQYLG HFTPX // ID X94583_1 STANDARD; PRT; 234 AA. AC X94583; DT Tue Jul 21 07:06:44 2009 DE A.thaliana mitochondrial coxI gene. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Biochim. Biophys. Acta 1307 (3), 301-308 (1996) RL PUBMED 8688465 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : subunit I FT LOCUS_TAG : FT PROTEIN_ID : CAA64276.1 FT PROTEIN_NAME : cytochrome c oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 702 FT DIRECTIONS : positive FT EDITING : 6 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 702 NT; CD 1 ggggcaatta ccatgtCatt aaccgatcga aactttaata caaccttttt CD 51 tgatcccgct ggagggggag acccaatttt ataccagcat ctcttttggt CD 101 tcttcggtca tccagaggtg tatattctca ttctgcctgg attcggtatc CD 151 ataagtcata tcgtttcgac tttttcggga aaaccggtct tcgggtatct CD 201 aggcatggtt tatgccatga tcagtattgg tgtcttagga tttcttgttt CD 251 gggctcatca tatgtttact gtgggcttag acgtagatac ccgtgcctac CD 301 ttcaccgcag ctaccatgat catagctgtc cccactggaa tcaaaatctt CD 351 tagttggatc gctaccatgt gggggggttc gatacaatac aaaacaccca CD 401 tgttatttgc tgtaggattc atctttttgt tcaccatagg aggactcact CD 451 ggaatagtcc tggcaaattc agggctagac attgctctac atgatactta CD 501 ttatgtggtt gcacatttcc attatgtact ttctatggga gccgtttttg CD 551 ctttatttgc aggattttac tattgggtgg gtaaaatctt tggtcggaca CD 601 taccctgaaa ctttaggtca aatccatttt tggatcactt ttttcggggt CD 651 taatttgacc ttctttccta tgcatttctt agggctttca ggtatgccac CD 701 gt FT EDITED CDNA CD 1 ggggcaatta ccatgtTatt aaccgatcga aactttaata caaccttttt CD 51 tgatcccgct ggagggggag acccaatttt ataccagcat ctcttttggt CD 101 tcttcggtca tccagaggtg tatattctca ttctgcctgg attcggtatc CD 151 ataagtcata tcgtttcgac tttttcggga aaaccggtct tcgggtatct CD 201 aggcatggtt tatgccatga tcagtattgg tgtcttagga tttcttgttt CD 251 gggctcatca tatgtttact gtgggcttag acgtagatac ccgtgcctac CD 301 ttcaccgcag ctaccatgat catagctgtc cccactggaa tcaaaatctt CD 351 tagttggatc gctaccatgt gggggggttc gatacaatac aaaacaccca CD 401 tgttatttgc tgtaggattc atctttttgt tcaccatagg aggactcact CD 451 ggaatagtcc tggcaaattc agggctagac attgctctac atgatactta CD 501 ttatgtggtt gcacatttcc attatgtact ttctatggga gccgtttttg CD 551 ctttatttgc aggattttac tattgggtgg gtaaaatctt tggtcggaca CD 601 taccctgaaa ctttaggtca aatccatttt tggatcactt ttttcggggt CD 651 taatttgacc ttctttccta tgcatttctt agggctttca ggtatgccac CD 701 gt SQ SEQUENCE 234 AA; GAITMLLTDR NFNTTFFDPA GGGDPILYQH LFWFFGHPEV YILILPGFGI ISHIVSTFSG KPVFGYLGMV YAMISIGVLG FLVWAHHMFT VGLDVDTRAY FTAATMIIAV PTGIKIFSWI ATMWGGSIQY KTPMLFAVGF IFLFTIGGLT GIVLANSGLD IALHDTYYVV AHFHYVLSMG AVFALFAGFY YWVGKIFGRT YPETLGQIHF WITFFGVNLT FFPMHFLGLS GMPR // ID X94584_1 STANDARD; PRT; 140 AA. AC X94584; DT Tue Jul 21 07:06:44 2009 DE B.trilobata mitochondrial coxI gene. OS mitochondrion Bazzania trilobata OC Bazzania trilobata RN [1] RL Biochim. Biophys. Acta 1307 (3), 301-308 (1996) RL PUBMED 8688465 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : subunit I FT LOCUS_TAG : FT PROTEIN_ID : CAA64277.1 FT PROTEIN_NAME : cytochrome c oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 420 FT DIRECTIONS : positive FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 29 P(cCa) -> L(cTa) FT EDITING : 105 R(Cgg) -> W(Tgg) FT EDITING : 126 S(tCc) -> F(tTc) FT EDITING : 129 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 420 NT; CD 1 acctttttcg atcctgccgg tggcggggat ccaattttat accagcatct CD 51 tttcCggttc ttcggtcatc ctgaggttta tattcCaatt ctgccaggat CD 101 ttggtatcat tagtcatatc gtctctacct tttcaagaaa acccgtcttt CD 151 ggttatctag gcatggtgta cgccatgatc agtattggag ttcttagatt CD 201 tattgtatgg gctcatcaca tgtttactgt agggttagac gttgatacac CD 251 gtgcttactt caccgcggct accatgatta tagccgtgcc tactggaata CD 301 aagattttta gtCggatcgc aaccatgtgg ggggggtcaa tacaatacaa CD 351 aacacccatg ttattcgctg tagggtCcat attttCgttc acggtagggg CD 401 ggcttactgg aatagtattg FT EDITED CDNA CD 1 acctttttcg atcctgccgg tggcggggat ccaattttat accagcatct CD 51 tttcTggttc ttcggtcatc ctgaggttta tattcTaatt ctgccaggat CD 101 ttggtatcat tagtcatatc gtctctacct tttcaagaaa acccgtcttt CD 151 ggttatctag gcatggtgta cgccatgatc agtattggag ttcttagatt CD 201 tattgtatgg gctcatcaca tgtttactgt agggttagac gttgatacac CD 251 gtgcttactt caccgcggct accatgatta tagccgtgcc tactggaata CD 301 aagattttta gtTggatcgc aaccatgtgg ggggggtcaa tacaatacaa CD 351 aacacccatg ttattcgctg tagggtTcat attttTgttc acggtagggg CD 401 ggcttactgg aatagtattg SQ SEQUENCE 140 AA; TFFDPAGGGD PILYQHLFWF FGHPEVYILI LPGFGIISHI VSTFSRKPVF GYLGMVYAMI SIGVLRFIVW AHHMFTVGLD VDTRAYFTAA TMIIAVPTGI KIFSWIATMW GGSIQYKTPM LFAVGFIFLF TVGGLTGIVL // ID X94587_1 STANDARD; PRT; 235 AA. AC X94587; DT Tue Jul 21 07:06:44 2009 DE G.biloba mitochondrial coxI gene. OS mitochondrion Ginkgo biloba (maidenhair tree) OC Ginkgo biloba RN [1] RL Biochim. Biophys. Acta 1307 (3), 301-308 (1996) RL PUBMED 8688465 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : subunit I FT LOCUS_TAG : FT PROTEIN_ID : CAA64280.1 FT PROTEIN_NAME : cytochrome c oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 705 FT DIRECTIONS : positive FT EDITING : 17 S(tCt) -> F(tTt) FT EDITING : 33 R(Cgg) -> W(Tgg) FT EDITING : 43 P(cCc) -> L(cTc) FT EDITING : 79 P(cCt) -> L(cTt) FT EDITING : 81 S(tCt) -> F(tTt) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 140 S(tCc) -> F(tTc) FT EDITING : 169 A(gCg) -> V(gTg) FT EDITING : 219 P(cCg) -> L(cTg) FT EDITING : 234 C(Tgt) -> R(Cgt) FT CODON_START : 1 CL CDNALEN 705 NT; CD 1 ggggcaatta ccatgttatt aaccgatcga aactttaata ctacattttC CD 51 tgatcctgct ggaggggggg accctatatt ataccagcat ctctttCggt CD 101 tcttcggtca tccagaggtg tatattcCca ttctgcctgg attcggtatc CD 151 ataagtcata tcgtatcgac tttttcggga aaaccggtct tcgggtatct CD 201 aggcatggtt tatgccatga tcagtatagg tgttcCtgga tCtcttgttC CD 251 gggctcatca tatgtttaca gtgggcttag acattgatac gcgtgcctac CD 301 tttaccgcag ctaccatgat catagctgtc cccacaggaa tcaaaatatt CD 351 tagttggatc gctaccatgt ggggaggttc gatacaatac aaaacaccca CD 401 tgttatttgc tgtagggtCc atctttttgt tcaccgtagg aggactcact CD 451 ggaatagtcc tggctaattc tgggctagac attgctctac atgatactta CD 501 ttatgCggtt gcacatttcc attatgtact ttctatggaa gccgtttttg CD 551 ctttatttgc aggatttcac tattgggtgg gtaaaatctc tggtcggaca CD 601 taccctgaaa ccttaggtca aatccatttt tggatcactt ttttcggggt CD 651 taatcCgacc ttctttccca agcatttctt agggctttcg ggtatgccaT CD 701 gtcgc FT EDITED CDNA CD 1 ggggcaatta ccatgttatt aaccgatcga aactttaata ctacattttT CD 51 tgatcctgct ggaggggggg accctatatt ataccagcat ctctttTggt CD 101 tcttcggtca tccagaggtg tatattcTca ttctgcctgg attcggtatc CD 151 ataagtcata tcgtatcgac tttttcggga aaaccggtct tcgggtatct CD 201 aggcatggtt tatgccatga tcagtatagg tgttcTtgga tTtcttgttT CD 251 gggctcatca tatgtttaca gtgggcttag acattgatac gcgtgcctac CD 301 tttaccgcag ctaccatgat catagctgtc cccacaggaa tcaaaatatt CD 351 tagttggatc gctaccatgt ggggaggttc gatacaatac aaaacaccca CD 401 tgttatttgc tgtagggtTc atctttttgt tcaccgtagg aggactcact CD 451 ggaatagtcc tggctaattc tgggctagac attgctctac atgatactta CD 501 ttatgTggtt gcacatttcc attatgtact ttctatggaa gccgtttttg CD 551 ctttatttgc aggatttcac tattgggtgg gtaaaatctc tggtcggaca CD 601 taccctgaaa ccttaggtca aatccatttt tggatcactt ttttcggggt CD 651 taatcTgacc ttctttccca agcatttctt agggctttcg ggtatgccaC CD 701 gtcgc SQ SEQUENCE 235 AA; GAITMLLTDR NFNTTFFDPA GGGDPILYQH LFWFFGHPEV YILILPGFGI ISHIVSTFSG KPVFGYLGMV YAMISIGVLG FLVWAHHMFT VGLDIDTRAY FTAATMIIAV PTGIKIFSWI ATMWGGSIQY KTPMLFAVGF IFLFTVGGLT GIVLANSGLD IALHDTYYVV AHFHYVLSME AVFALFAGFH YWVGKISGRT YPETLGQIHF WITFFGVNLT FFPKHFLGLS GMPRR // ID X94588_1 STANDARD; PRT; 140 AA. AC X94588; DT Tue Jul 21 07:06:44 2009 DE H.imponens mitochondrial coxI gene. OS mitochondrion Hypnum imponens OC Hypnum imponens RN [1] RL Biochim. Biophys. Acta 1307 (3), 301-308 (1996) RL PUBMED 8688465 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : subunit I FT LOCUS_TAG : FT PROTEIN_ID : CAA64281.1 FT PROTEIN_NAME : cytochrome c oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 420 FT DIRECTIONS : positive FT EDITING : 29 P(CCa) -> L(TTa) FT EDITING : 79 S(tCa) -> L(tTa) FT EDITING : 129 P(CCg) -> L(TTg) FT CODON_START : 1 CL CDNALEN 420 NT; CD 1 acctttttcg atcctgccgg tggcggggat cccattttat accagcatct CD 51 tttctggttc ttcggtcatc ctgaggtcta tattCCaatt ctgccaggat CD 101 ttggtatcat tagtcatatc gtctctacat tttcaagaaa acccgtattc CD 151 ggttatccag gcatggtgta cgccatgatc agtattggag ttcttggatt CD 201 tattgtatgg gctcatcaca tgtttactgt agggtCagac gttgatacac CD 251 gtgcttactt caccgcggct accatgatta tagccgtgcc tactggaata CD 301 aagattttta gttggatcgc aaccatgtgg ggagggtcaa tacaatacaa CD 351 aacacccatg ttattcgctg tagggttcat atttCCgttc acggtagggg CD 401 ggcttactgg aatagtattg FT EDITED CDNA CD 1 acctttttcg atcctgccgg tggcggggat cccattttat accagcatct CD 51 tttctggttc ttcggtcatc ctgaggtcta tattTTaatt ctgccaggat CD 101 ttggtatcat tagtcatatc gtctctacat tttcaagaaa acccgtattc CD 151 ggttatccag gcatggtgta cgccatgatc agtattggag ttcttggatt CD 201 tattgtatgg gctcatcaca tgtttactgt agggtTagac gttgatacac CD 251 gtgcttactt caccgcggct accatgatta tagccgtgcc tactggaata CD 301 aagattttta gttggatcgc aaccatgtgg ggagggtcaa tacaatacaa CD 351 aacacccatg ttattcgctg tagggttcat atttTTgttc acggtagggg CD 401 ggcttactgg aatagtattg SQ SEQUENCE 140 AA; TFFDPAGGGD PILYQHLFWF FGHPEVYILI LPGFGIISHI VSTFSRKPVF GYPGMVYAMI SIGVLGFIVW AHHMFTVGLD VDTRAYFTAA TMIIAVPTGI KIFSWIATMW GGSIQYKTPM LFAVGFIFLF TVGGLTGIVL // ID X94589_1 STANDARD; PRT; 141 AA. AC X94589; DT Tue Jul 21 07:06:44 2009 DE I.flaccida mitochondrial coxI gene. OS mitochondrion Isoetes flaccida OC Isoetes flaccida RN [1] RL Biochim. Biophys. Acta 1307 (3), 301-308 (1996) RL PUBMED 8688465 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : subunit I FT LOCUS_TAG : FT PROTEIN_ID : CAA64282.1 FT PROTEIN_NAME : cytochrome c oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 423 FT DIRECTIONS : positive FT EDITING : 3 S(tCt) -> F(tTt) FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 29 P(cCc) -> L(cTc) FT EDITING : 34 S(tCc) -> F(tTc) FT EDITING : 140 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 423 NT; CD 1 accttttCtg atcccgcagg agggggggac ccaatattat accagcatct CD 51 ctttCggttc ttcggtcatc cagaggtgta tattcCcatt ctgcctggat CD 101 Ccggtatcat aagtcatatc gtttcgactt tttcgggaaa accggtcttc CD 151 gggtatttag gcatggttta tgccatgatc agtataggtg ttcttggatt CD 201 tcttgtttgg gctcatcata tgtttactgt gggcttagac gttgataccc CD 251 gtgcctactt caccgcagct accatgatca tagctgtccc cactggaatt CD 301 aaaatcttta gttggatcgc taccatgtgg gggggttcga tacaatacaa CD 351 aacacccatg ttatttgctg tagggttcat ctttttgttc accataggag CD 401 gactcactgg aatagtccCg gca FT EDITED CDNA CD 1 accttttTtg atcccgcagg agggggggac ccaatattat accagcatct CD 51 ctttTggttc ttcggtcatc cagaggtgta tattcTcatt ctgcctggat CD 101 Tcggtatcat aagtcatatc gtttcgactt tttcgggaaa accggtcttc CD 151 gggtatttag gcatggttta tgccatgatc agtataggtg ttcttggatt CD 201 tcttgtttgg gctcatcata tgtttactgt gggcttagac gttgataccc CD 251 gtgcctactt caccgcagct accatgatca tagctgtccc cactggaatt CD 301 aaaatcttta gttggatcgc taccatgtgg gggggttcga tacaatacaa CD 351 aacacccatg ttatttgctg tagggttcat ctttttgttc accataggag CD 401 gactcactgg aatagtccTg gca SQ SEQUENCE 141 AA; TFFDPAGGGD PILYQHLFWF FGHPEVYILI LPGFGIISHI VSTFSGKPVF GYLGMVYAMI SIGVLGFLVW AHHMFTVGLD VDTRAYFTAA TMIIAVPTGI KIFSWIATMW GGSIQYKTPM LFAVGFIFLF TIGGLTGIVL A // ID X94590_1 STANDARD; PRT; 172 AA. AC X94590; DT Tue Jul 21 07:06:44 2009 DE Larix sp. mitochondrial coxI gene. OS mitochondrion Larix sp. OC Larix sp. RN [1] RL Biochim. Biophys. Acta 1307 (3), 301-308 (1996) RL PUBMED 8688465 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : subunit I FT LOCUS_TAG : FT PROTEIN_ID : CAA64283.1 FT PROTEIN_NAME : cytochrome c oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 516 FT DIRECTIONS : positive FT EDITING : 7 S(tCa) -> L(tTa) FT EDITING : 17 S(tCc) -> F(tTc) FT EDITING : 33 R(Cgg) -> W(Tgg) FT EDITING : 35 S(tCc) -> F(tTc) FT EDITING : 41 H(Cat) -> Y(Tat) FT EDITING : 43 P(cCc) -> L(cTc) FT EDITING : 45 P(cCg) -> L(cTg) FT EDITING : 79 P(cCt) -> L(cTt) FT EDITING : 81 S(tCt) -> F(tTt) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 89 S(tCt) -> F(tTt) FT EDITING : 93 S(tCa) -> L(tTa) FT EDITING : 100 H(Cac) -> Y(Tac) FT EDITING : 101 S(tCt) -> F(tTt) FT EDITING : 117 S(tCt) -> F(tTt) FT EDITING : 119 R(Cgg) -> W(Tgg) FT EDITING : 136 P(CCt) -> F(TTt) FT EDITING : 138 A(gCa) -> V(gTa) FT EDITING : 140 S(tCc) -> F(tTc) FT EDITING : 143 P(CCg) -> L(TTg) FT EDITING : 144 S(tCc) -> F(tTc) FT EDITING : 157 P(Cct) -> S(Tct) FT EDITING : 163 P(cCg) -> L(cTg) FT EDITING : 167 H(Cat) -> Y(Tat) FT CODON_START : 1 CL CDNALEN 516 NT; CD 1 ggggcaatta ccatgttatC aaccgatcga agctttaata caaccttttC CD 51 cgatcctgct ggagggggag acccgatatt ataccagcat ctctttCggt CD 101 tctCcggtca tccagaggtg CatattcCca ttcCgcccgg attcggtatc CD 151 attagtcata tcgtatcgac tttttcggga aaaccggtat tcgggtatcc CD 201 aggcatggtt tatgccatga tcagtattgg tgttcCtgga tCtcctgttC CD 251 gggctcatca tatgtCtact gtgggctCag acgttgatac gcgtgctCac CD 301 tCtaccgcag ctaccatgat catagctgtc cccactggaa tcaaaatctC CD 351 tagtCggatc gctaccatgt ggggaggttc gatacgatac aaaacaccca CD 401 tgttaCCtgc tgCagggtCc atctttCCgt Ccaccatagg aggactcact CD 451 ggaatagtcc tggcaaatCc tgggctagac attgctcCgc atgatactCa CD 501 ttatgtggtt gcacat FT EDITED CDNA CD 1 ggggcaatta ccatgttatT aaccgatcga agctttaata caaccttttT CD 51 cgatcctgct ggagggggag acccgatatt ataccagcat ctctttTggt CD 101 tctTcggtca tccagaggtg TatattcTca ttcTgcccgg attcggtatc CD 151 attagtcata tcgtatcgac tttttcggga aaaccggtat tcgggtatcc CD 201 aggcatggtt tatgccatga tcagtattgg tgttcTtgga tTtcctgttT CD 251 gggctcatca tatgtTtact gtgggctTag acgttgatac gcgtgctTac CD 301 tTtaccgcag ctaccatgat catagctgtc cccactggaa tcaaaatctT CD 351 tagtTggatc gctaccatgt ggggaggttc gatacgatac aaaacaccca CD 401 tgttaTTtgc tgTagggtTc atctttTTgt Tcaccatagg aggactcact CD 451 ggaatagtcc tggcaaatTc tgggctagac attgctcTgc atgatactTa CD 501 ttatgtggtt gcacat SQ SEQUENCE 172 AA; GAITMLLTDR SFNTTFFDPA GGGDPILYQH LFWFFGHPEV YILILPGFGI ISHIVSTFSG KPVFGYPGMV YAMISIGVLG FPVWAHHMFT VGLDVDTRAY FTAATMIIAV PTGIKIFSWI ATMWGGSIRY KTPMLFAVGF IFLFTIGGLT GIVLANSGLD IALHDTYYVV AH // ID X94592_1 STANDARD; PRT; 140 AA. AC X94592; DT Tue Jul 21 07:06:44 2009 DE Megaceros sp. mitochondrial coxI gene. OS mitochondrion Megaceros sp. OC Megaceros sp. RN [1] RL Biochim. Biophys. Acta 1307 (3), 301-308 (1996) RL PUBMED 8688465 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : subunit I FT LOCUS_TAG : FT PROTEIN_ID : CAA64285.1 FT PROTEIN_NAME : cytochrome c oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 420 FT DIRECTIONS : positive FT EDITING : 2 S(tCt) -> F(tTt) FT EDITING : 17 P(cCa) -> L(cTa) FT EDITING : 20 S(tCt) -> F(tTt) FT EDITING : 27 H(Cat) -> Y(Tat) FT EDITING : 29 P(cCa) -> L(cTa) FT EDITING : 45 P(Cca) -> S(Tca) FT EDITING : 58 V(gTc) -> A(gCc) FT EDITING : 59 T(aCg) -> M(aTg) FT EDITING : 94 T(aCt) -> I(aTt) FT EDITING : 126 L(Ctt) -> F(Ttt) FT EDITING : 130 L(Ctc) -> F(Ttc) FT CODON_START : 1 CL CDNALEN 420 NT; CD 1 acctCttttg atccagcggg aggaggagat ccgattttat accagcatcC CD 51 attttggtCt ttcggtcatc cagaggttCa tattcCaatt ttgccaggat CD 101 tcggtataat tagtcatatc gtttccacgt ttCcaagaaa acctgtattc CD 151 ggttatctag gcatggttta tgTcaCgatc agtattggag ttctcggatt CD 201 tatcgtgtgg gcacaccaca tgtttactgt aggcttagac gttgatactc CD 251 gtgcctactt tactgcggct accatgatta Ctgctgtacc tactggaatt CD 301 aagattttta gttggggcgc tactatgtgg gggggttcga tagagtacac CD 351 ctcacctctt ttttttgcag taggtCttat tttcttaCtc accgtgggag CD 401 gctgtactgg aatagtattg FT EDITED CDNA CD 1 acctTttttg atccagcggg aggaggagat ccgattttat accagcatcT CD 51 attttggtTt ttcggtcatc cagaggttTa tattcTaatt ttgccaggat CD 101 tcggtataat tagtcatatc gtttccacgt ttTcaagaaa acctgtattc CD 151 ggttatctag gcatggttta tgCcaTgatc agtattggag ttctcggatt CD 201 tatcgtgtgg gcacaccaca tgtttactgt aggcttagac gttgatactc CD 251 gtgcctactt tactgcggct accatgatta Ttgctgtacc tactggaatt CD 301 aagattttta gttggggcgc tactatgtgg gggggttcga tagagtacac CD 351 ctcacctctt ttttttgcag taggtTttat tttcttaTtc accgtgggag CD 401 gctgtactgg aatagtattg SQ SEQUENCE 140 AA; TFFDPAGGGD PILYQHLFWF FGHPEVYILI LPGFGIISHI VSTFSRKPVF GYLGMVYAMI SIGVLGFIVW AHHMFTVGLD VDTRAYFTAA TMIIAVPTGI KIFSWGATMW GGSIEYTSPL FFAVGFIFLF TVGGCTGIVL // ID X94593_1 STANDARD; PRT; 172 AA. AC X94593; DT Tue Jul 21 07:06:44 2009 DE N.exaltata mitochondrial coxI gene. OS mitochondrion Nephrolepis exaltata OC Nephrolepis exaltata RN [1] RL Biochim. Biophys. Acta 1307 (3), 301-308 (1996) RL PUBMED 8688465 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : subunit I FT LOCUS_TAG : FT PROTEIN_ID : CAA64286.1 FT PROTEIN_NAME : cytochrome c oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 516 FT DIRECTIONS : positive FT EDITING : 43 P(cCc) -> L(cTc) FT EDITING : 48 S(tCc) -> F(tTc) FT EDITING : 154 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 516 NT; CD 1 ggggcaatta ccatgttatt aaccgatcga aactttaata caaccttttt CD 51 tgatcccgct ggagggggag acccaatttt ataccagcat ctcttttggt CD 101 tcttcggtca tccagaggtg tatattcCca ttctgcctgg atCcggtatc CD 151 ataagtcata tcgtttctac tttttcggga aaacctgttt tcgggtatct CD 201 aggcatggtt tatgccatga tcagtatagg tgttcttgga tttcttgttt CD 251 gggctcatca tatgtttact gtgggcttag acgttgatac ccgtgcctac CD 301 ttcaccgcag ctaccatgat catagctgtc cccactggga tcaaaatctt CD 351 tagttggatc gctaccatgt gggggggttc gatacaatac aaaacaccca CD 401 tgttatttgc tgtagggttc atatttttgt tcaccatagg aggactcact CD 451 ggaatagtcc Cggcaaattc agggctagac attgctctac atgatactta CD 501 ttatgtggtt gcacat FT EDITED CDNA CD 1 ggggcaatta ccatgttatt aaccgatcga aactttaata caaccttttt CD 51 tgatcccgct ggagggggag acccaatttt ataccagcat ctcttttggt CD 101 tcttcggtca tccagaggtg tatattcTca ttctgcctgg atTcggtatc CD 151 ataagtcata tcgtttctac tttttcggga aaacctgttt tcgggtatct CD 201 aggcatggtt tatgccatga tcagtatagg tgttcttgga tttcttgttt CD 251 gggctcatca tatgtttact gtgggcttag acgttgatac ccgtgcctac CD 301 ttcaccgcag ctaccatgat catagctgtc cccactggga tcaaaatctt CD 351 tagttggatc gctaccatgt gggggggttc gatacaatac aaaacaccca CD 401 tgttatttgc tgtagggttc atatttttgt tcaccatagg aggactcact CD 451 ggaatagtcc Tggcaaattc agggctagac attgctctac atgatactta CD 501 ttatgtggtt gcacat SQ SEQUENCE 172 AA; GAITMLLTDR NFNTTFFDPA GGGDPILYQH LFWFFGHPEV YILILPGFGI ISHIVSTFSG KPVFGYLGMV YAMISIGVLG FLVWAHHMFT VGLDVDTRAY FTAATMIIAV PTGIKIFSWI ATMWGGSIQY KTPMLFAVGF IFLFTIGGLT GIVLANSGLD IALHDTYYVV AH // ID X94594_1 STANDARD; PRT; 235 AA. AC X94594; DT Tue Jul 21 07:06:44 2009 DE P.polybotrya mitochondrial coxI gene. OS mitochondrion Peperomia polybotrya (coin leaf plant) OC Peperomia polybotrya RN [1] RL Biochim. Biophys. Acta 1307 (3), 301-308 (1996) RL PUBMED 8688465 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : subunit I FT LOCUS_TAG : FT PROTEIN_ID : CAA64287.1 FT PROTEIN_NAME : cytochrome c oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 705 FT DIRECTIONS : positive FT EDITING : 17 S(tCt) -> F(tTt) FT EDITING : 43 P(cCc) -> L(cTc) FT EDITING : 48 S(tCt) -> F(tTt) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 140 S(tCc) -> F(tTc) FT EDITING : 154 P(cCg) -> L(cTg) FT EDITING : 169 A(gCg) -> V(gTg) FT EDITING : 214 S(tCt) -> F(tTt) FT EDITING : 219 P(cCg) -> L(cTg) FT EDITING : 221 L(Ctc) -> F(Ttc) FT CODON_START : 1 CL CDNALEN 705 NT; CD 1 ggggctatta ccatgttatt aaccgatcga aactttaata caaccttttC CD 51 tgatccagct ggagggggag acccaatatt ataccagcat ctcttttggt CD 101 tcttcggtca ccctgaagtg tatattcCca ttctgcctgg atCtggtatc CD 151 ataagtcata ttgtatcgac tttttcggga aaaccggtct tcgggtatga CD 201 tggcatggtt tatgccatga tcagtatagg tgttcttgga tttcttgttC CD 251 gggctcatca tatgtttaca gtgggcttag acgttgatac gcgtgcctac CD 301 ttcaccgcag ctaccatgat catagcggtc cccactggaa tcaaaatctt CD 351 tagttggatc gctaccatgt ggggaggttc catacaatac aaaacaccca CD 401 tgttatttgc tgtagggtCc atctttttgt tcaccatagg aggactcact CD 451 ggaatagtcc Cggcgaattc tgggctagac attgctctac atgatactta CD 501 ttatgCggtt gcacatttcc attatgtact ttctatggga gccgtttttg CD 551 ctttatttgc aggatttcac tattgggtgg gtaaaatctt tggtcggaca CD 601 taccctgaaa ctttaggtca aatccatttt tggatcactt Ctttcggagt CD 651 taatcCgacc Ctctttccca tgcatttctt agggctttcg ggtatgccac CD 701 gtcgc FT EDITED CDNA CD 1 ggggctatta ccatgttatt aaccgatcga aactttaata caaccttttT CD 51 tgatccagct ggagggggag acccaatatt ataccagcat ctcttttggt CD 101 tcttcggtca ccctgaagtg tatattcTca ttctgcctgg atTtggtatc CD 151 ataagtcata ttgtatcgac tttttcggga aaaccggtct tcgggtatga CD 201 tggcatggtt tatgccatga tcagtatagg tgttcttgga tttcttgttT CD 251 gggctcatca tatgtttaca gtgggcttag acgttgatac gcgtgcctac CD 301 ttcaccgcag ctaccatgat catagcggtc cccactggaa tcaaaatctt CD 351 tagttggatc gctaccatgt ggggaggttc catacaatac aaaacaccca CD 401 tgttatttgc tgtagggtTc atctttttgt tcaccatagg aggactcact CD 451 ggaatagtcc Tggcgaattc tgggctagac attgctctac atgatactta CD 501 ttatgTggtt gcacatttcc attatgtact ttctatggga gccgtttttg CD 551 ctttatttgc aggatttcac tattgggtgg gtaaaatctt tggtcggaca CD 601 taccctgaaa ctttaggtca aatccatttt tggatcactt Ttttcggagt CD 651 taatcTgacc Ttctttccca tgcatttctt agggctttcg ggtatgccac CD 701 gtcgc SQ SEQUENCE 235 AA; GAITMLLTDR NFNTTFFDPA GGGDPILYQH LFWFFGHPEV YILILPGFGI ISHIVSTFSG KPVFGYDGMV YAMISIGVLG FLVWAHHMFT VGLDVDTRAY FTAATMIIAV PTGIKIFSWI ATMWGGSIQY KTPMLFAVGF IFLFTIGGLT GIVLANSGLD IALHDTYYVV AHFHYVLSMG AVFALFAGFH YWVGKIFGRT YPETLGQIHF WITFFGVNLT FFPMHFLGLS GMPRR // ID X94596_1 STANDARD; PRT; 172 AA. AC X94596; DT Tue Jul 21 07:06:44 2009 DE Zamia sp. mitochondrial coxI gene. OS mitochondrion Zamia sp. OC Zamia sp. RN [1] RL Biochim. Biophys. Acta 1307 (3), 301-308 (1996) RL PUBMED 8688465 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : subunit I FT LOCUS_TAG : FT PROTEIN_ID : CAA64289.1 FT PROTEIN_NAME : cytochrome c oxidase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 516 FT DIRECTIONS : positive FT EDITING : 17 S(tCt) -> F(tTt) FT EDITING : 33 R(Cgg) -> W(Tgg) FT EDITING : 34 S(tCt) -> F(tTt) FT EDITING : 35 S(tCc) -> F(tTc) FT EDITING : 41 H(Cat) -> Y(Tat) FT EDITING : 43 P(cCc) -> L(cTc) FT EDITING : 45 P(cCg) -> L(cTg) FT EDITING : 48 S(tCc) -> F(tTc) FT EDITING : 81 S(tCt) -> F(tTt) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 89 S(tCt) -> F(tTt) FT EDITING : 93 S(tCa) -> L(tTa) FT EDITING : 100 H(Cac) -> Y(Tac) FT EDITING : 101 S(tCt) -> F(tTt) FT EDITING : 117 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 516 NT; CD 1 ggggcaatta ccatgttatt gaccgatcga aactttaata caaccttttC CD 51 tgatcctgct ggagggggag acccgatatt ataccagcat ctctttCggt CD 101 CttCcggtca tccagaggtg CatattcCca ttcCgcccag atCcggtatc CD 151 attagtcata tcgtatcgac ttttctggga aaaccggtct tcaggtatct CD 201 aggcatggtt tatgccatga tcagtattgg tgttcttgga tCtcctgttC CD 251 gggctcatca tatgtCtact gtgggctCag atgttgatac gcgtgctCac CD 301 tCtaccgcaa ctaccatgat catagctgtc cccactggaa tcaaaatctC CD 351 tagttggatc gctactatgt ggggaggttc aatccgatcc atcacaccca CD 401 tgttatttgc ggtagggttc ctgttcttgt tcaccatcgg aggactcact CD 451 ggaatcgtac tggctaattc cgggctagac attgctctgc atgatacgta CD 501 ttatgtggtt gcacat FT EDITED CDNA CD 1 ggggcaatta ccatgttatt gaccgatcga aactttaata caaccttttT CD 51 tgatcctgct ggagggggag acccgatatt ataccagcat ctctttTggt CD 101 TttTcggtca tccagaggtg TatattcTca ttcTgcccag atTcggtatc CD 151 attagtcata tcgtatcgac ttttctggga aaaccggtct tcaggtatct CD 201 aggcatggtt tatgccatga tcagtattgg tgttcttgga tTtcctgttT CD 251 gggctcatca tatgtTtact gtgggctTag atgttgatac gcgtgctTac CD 301 tTtaccgcaa ctaccatgat catagctgtc cccactggaa tcaaaatctT CD 351 tagttggatc gctactatgt ggggaggttc aatccgatcc atcacaccca CD 401 tgttatttgc ggtagggttc ctgttcttgt tcaccatcgg aggactcact CD 451 ggaatcgtac tggctaattc cgggctagac attgctctgc atgatacgta CD 501 ttatgtggtt gcacat SQ SEQUENCE 172 AA; GAITMLLTDR NFNTTFFDPA GGGDPILYQH LFWFFGHPEV YILILPRFGI ISHIVSTFLG KPVFRYLGMV YAMISIGVLG FPVWAHHMFT VGLDVDTRAY FTATTMIIAV PTGIKIFSWI ATMWGGSIRS ITPMLFAVGF LFLFTIGGLT GIVLANSGLD IALHDTYYVV AH // ID X96535_1 STANDARD; PRT; 363 AA. AC X96535; DT Tue Jul 21 07:06:44 2009 DE A.thaliana mitochondrial rps4 gene & nad2 gene, exon 1 & 2 and OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Biol. Chem. Hoppe-Seyler 377 (4), 251-257 (1996) RL PUBMED 8737990 FT Full length CDS FT GENE : rps4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA65380.1 FT PROTEIN_NAME : small ribosomal protein 4 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 886 - 1974 FT DIRECTIONS : positive FT EDITING : 30 R(Cgg) -> W(Tgg) FT EDITING : 77 L(Ctt) -> F(Ttt) FT EDITING : 79 H(Cat) -> Y(Tat) FT EDITING : 100 P(cCa) -> L(cTa) FT EDITING : 103 P(cCa) -> L(cTa) FT EDITING : 115 H(Cat) -> Y(Tat) FT EDITING : 126 P(cCg) -> L(cTg) FT EDITING : 175 S(tCa) -> L(tTa) FT EDITING : 319 S(tCg) -> L(tTg) FT EDITING : 323 H(Cat) -> Y(Tat) FT EDITING : 331 S(tCt) -> F(tTt) FT EDITING : 348 P(CCa) -> L(TTa) FT EDITING : 351 P(cCt) -> L(cTt) FT EDITING : 353 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 1089 NT; CD 1 atgtggctgc ttaaaaaact gattcaacga gatatagatt tgtccccatt CD 51 aagatttcaa acttgtcgtc tactttcagg aaatgttCgg aacagagaac CD 101 tgacaataat acaacgccgc attctccgaa gattgaggaa caggaagaga CD 151 tctattaaga agagaaagat ttatccgaaa aaatatctta ccagttatat CD 201 acaattacaa actacacgaa agttgcccCt ttttCatggg gatttaccca CD 251 tcacagagat gcacagagga acaaaacgaa cttcatatat cccttttcCa CD 301 ctcaatcCag aaacaagatt tgacgttatt ccgcttcgtc tcCattttct CD 351 tgaaactatt cctcaagcaa ggcagcCgat aagtcatcga agggtttgtg CD 401 tgaataaagg aatggtaagc attactcatt ttaaactttc ccacggtgat CD 451 ataatatctt ttcaagaaaa taacgcgata atacgcggtg aagaaataag CD 501 gagatctttc tataaagaaa tttCagttga aaaaatcata ggcaaattac CD 551 tgcatcaacc gctaagaatg tggagaagaa gcaaaactga atggttccac CD 601 ctactcaaaa ctaagagggg atgccgccta ctactaaaat cccggttttt CD 651 gcaacagttg cgttcttcta tgcaagaaga agacttagaa agaacaaaga CD 701 agtttggatc cgaaaaagta tgcttaggaa gttccttcgc tgagcacaag CD 751 agaatgaaga ggaatttgtt aaaatcccta ttcttatcga agagaaggaa CD 801 ggataaaaac ctaaatcttc ctactcgaac aatcagtcct atagtttaca CD 851 actcttcttt atctttatat agtaattcga cctattgctt cgcatccccc CD 901 cataagttga ctatgaagag aagaatcaaa aggatcgaac tacctactca CD 951 ttattCggag gttaatCata gaacaccaaa agctgtggta tCttatggac CD 1001 ctaacatagg tcatatccct cacgacataa gattaaaaga tCCaaacctt CD 1051 cCtcttCgga gcagaaacgg acgtggccaa aacatataa FT EDITED CDNA CD 1 atgtggctgc ttaaaaaact gattcaacga gatatagatt tgtccccatt CD 51 aagatttcaa acttgtcgtc tactttcagg aaatgttTgg aacagagaac CD 101 tgacaataat acaacgccgc attctccgaa gattgaggaa caggaagaga CD 151 tctattaaga agagaaagat ttatccgaaa aaatatctta ccagttatat CD 201 acaattacaa actacacgaa agttgcccTt ttttTatggg gatttaccca CD 251 tcacagagat gcacagagga acaaaacgaa cttcatatat cccttttcTa CD 301 ctcaatcTag aaacaagatt tgacgttatt ccgcttcgtc tcTattttct CD 351 tgaaactatt cctcaagcaa ggcagcTgat aagtcatcga agggtttgtg CD 401 tgaataaagg aatggtaagc attactcatt ttaaactttc ccacggtgat CD 451 ataatatctt ttcaagaaaa taacgcgata atacgcggtg aagaaataag CD 501 gagatctttc tataaagaaa tttTagttga aaaaatcata ggcaaattac CD 551 tgcatcaacc gctaagaatg tggagaagaa gcaaaactga atggttccac CD 601 ctactcaaaa ctaagagggg atgccgccta ctactaaaat cccggttttt CD 651 gcaacagttg cgttcttcta tgcaagaaga agacttagaa agaacaaaga CD 701 agtttggatc cgaaaaagta tgcttaggaa gttccttcgc tgagcacaag CD 751 agaatgaaga ggaatttgtt aaaatcccta ttcttatcga agagaaggaa CD 801 ggataaaaac ctaaatcttc ctactcgaac aatcagtcct atagtttaca CD 851 actcttcttt atctttatat agtaattcga cctattgctt cgcatccccc CD 901 cataagttga ctatgaagag aagaatcaaa aggatcgaac tacctactca CD 951 ttattTggag gttaatTata gaacaccaaa agctgtggta tTttatggac CD 1001 ctaacatagg tcatatccct cacgacataa gattaaaaga tTTaaacctt CD 1051 cTtcttTgga gcagaaacgg acgtggccaa aacatataa SQ SEQUENCE 363 AA; MWLLKKLIQR DIDLSPLRFQ TCRLLSGNVW NRELTIIQRR ILRRLRNRKR SIKKRKIYPK KYLTSYIQLQ TTRKLPFFYG DLPITEMHRG TKRTSYIPFL LNLETRFDVI PLRLYFLETI PQARQLISHR RVCVNKGMVS ITHFKLSHGD IISFQENNAI IRGEEIRRSF YKEILVEKII GKLLHQPLRM WRRSKTEWFH LLKTKRGCRL LLKSRFLQQL RSSMQEEDLE RTKKFGSEKV CLGSSFAEHK RMKRNLLKSL FLSKRRKDKN LNLPTRTISP IVYNSSLSLY SNSTYCFASP HKLTMKRRIK RIELPTHYLE VNYRTPKAVV FYGPNIGHIP HDIRLKDLNL LLWSRNGRGQ NI* // ID X96535_2 STANDARD; PRT; 500 AA. AC X96535; DT Tue Jul 21 07:06:44 2009 DE A.thaliana mitochondrial rps4 gene & nad2 gene, exon 1 & 2 and OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Biol. Chem. Hoppe-Seyler 377 (4), 251-257 (1996) RL PUBMED 8737990 FT Full length CDS FT GENE : nad2 FT NOTE : subunit 2 FT LOCUS_TAG : FT PROTEIN_ID : CAA65381.1 FT PROTEIN_NAME : NADH-ubiquinone oxidoreductase FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 63/0 FT INTRON 193/2 FT INTRON 247/1 FT INTRON 438/1 FT EDITING : 20 S(tCc) -> F(tTc) FT EDITING : 30 S(tCC) -> F(tTT) FT EDITING : 114 S(tCt) -> F(tTt) FT EDITING : 115 S(tCc) -> F(tTc) FT EDITING : 130 P(cCa) -> L(cTa) FT EDITING : 132 P(Cct) -> S(Tct) FT EDITING : 134 R(Cgc) -> C(Tgc) FT EDITING : 143 H(Cat) -> Y(Tat) FT EDITING : 147 A(gcC) -> A(gcT) FT EDITING : 154 P(cCt) -> L(cTt) FT EDITING : 176 G(ggC) -> G(ggT) FT EDITING : 177 S(tCg) -> L(tTg) FT EDITING : 186 S(tcC) -> S(tcT) FT EDITING : 195 S(tcC) -> S(tcT) FT EDITING : 214 T(acC) -> T(acT) FT EDITING : 232 S(tCt) -> F(tTt) FT EDITING : 281 S(tCt) -> F(tTt) FT EDITING : 318 P(cCt) -> L(cTt) FT EDITING : 321 H(Cat) -> Y(Tat) FT EDITING : 331 R(Cgt) -> C(Tgt) FT EDITING : 332 T(aCt) -> I(aTt) FT EDITING : 364 S(tCa) -> L(tTa) FT EDITING : 387 S(tCg) -> L(tTg) FT EDITING : 411 F(ttC) -> F(ttT) FT EDITING : 427 P(CCa) -> L(TTa) FT EDITING : 437 R(Cgt) -> C(Tgt) FT EDITING : 478 S(tCa) -> L(tTa) FT EDITING : 479 S(tCc) -> F(tTc) FT EDITING : 497 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1500 NT; CD 1 atgaaagcag aattcgttcg gatcctccca cacatgttca atcttttttt CD 51 agcggtttCc ccagagatct ttatcattaa tgcaacctCC attttgctca CD 101 ttcatggagt tgtatttagt acctctaaga aatatgatta tccgccgtta CD 151 gccagtaatg tgggttggct tggattactt agtgttctaa taaccttgct CD 201 tctgctcgcc gctggcgcac ctctcctaac tattgcccat ttattctgga CD 251 ataatctttt taggagggac aattttacat atttctgcca aatctttcta CD 301 ttattaagta cggctggtac catttcgatg tgtttcgatt CttCcgacca CD 351 agagaggttt gatgcttttg aattcattgt attaattcCa cttCctactC CD 401 gcggtatgct ctttatgatc tcggctCatg atttaattgc Catgtattta CD 451 gctattgagc Ctcaaagttt atgtttttat gtaatcgcag catcaaaaag CD 501 aaagtctgaa ttttccacgg aagccggCtC gaaatatttg atcttaggtg CD 551 cattttcCtc tggaatatta ttgtttggtt gttcCatgat ctatgggtct CD 601 actggagcta cccacttcga tcaattagcc aagattttga cCggatacga CD 651 aatcactggt gctcgatcta gtggtatttt tatggggatt ctgtCtatcg CD 701 ctgtaggatt cctattcaag atcactgcag ttccttttca tatgtgggca CD 751 ccagatatct atgagggttc acccaccccg gttacagcat tcctttctat CD 801 tgcgcctaaa atctctattt ctgctaatat tttacgtgtt tCtatttatg CD 851 gttcctatgg agctacattg caacaaatct tctttttctg cagcattgct CD 901 tctatgatct taggagcact ggccgccatg gcccaaacga aagtcaaaag CD 951 acCtctagct Catagttcaa ttggacatgt aggttatatt CgtaCtggtt CD 1001 tctcatgtgg aaccatagaa ggaattcaat cactactaat tggtatcttt CD 1051 atttatgcat taatgacgat ggatgcattc gccatagttt Cagcattacg CD 1101 gcaaacccgt gtcaaatata tagcggattt gggcgctcta gccaaaacga CD 1151 atcctatttC ggctattacc ttctccatta ctatgttctc atacgcagga CD 1201 atacccccgt tagccggctt ttgtagcaaa ttCtatttgt tcttcgccgc CD 1251 tttgggttgt ggggcttact ttctagccCC agtgggagta gtgactagcg CD 1301 ttataggtCg tttttattat atacgcttag tgaaaagaat gttttttgat CD 1351 acacctagga catggattct atatgaacca atggatcgta ataagtcgtt CD 1401 actactagca atgacttcct ttttcattac ttCatCcttg ctatacccct CD 1451 ctcctttgtt ctcagttact catcaaatgg cactcagttC atatctttaa FT EDITED CDNA CD 1 atgaaagcag aattcgttcg gatcctccca cacatgttca atcttttttt CD 51 agcggtttTc ccagagatct ttatcattaa tgcaacctTT attttgctca CD 101 ttcatggagt tgtatttagt acctctaaga aatatgatta tccgccgtta CD 151 gccagtaatg tgggttggct tggattactt agtgttctaa taaccttgct CD 201 tctgctcgcc gctggcgcac ctctcctaac tattgcccat ttattctgga CD 251 ataatctttt taggagggac aattttacat atttctgcca aatctttcta CD 301 ttattaagta cggctggtac catttcgatg tgtttcgatt TttTcgacca CD 351 agagaggttt gatgcttttg aattcattgt attaattcTa cttTctactT CD 401 gcggtatgct ctttatgatc tcggctTatg atttaattgc Tatgtattta CD 451 gctattgagc Ttcaaagttt atgtttttat gtaatcgcag catcaaaaag CD 501 aaagtctgaa ttttccacgg aagccggTtT gaaatatttg atcttaggtg CD 551 cattttcTtc tggaatatta ttgtttggtt gttcTatgat ctatgggtct CD 601 actggagcta cccacttcga tcaattagcc aagattttga cTggatacga CD 651 aatcactggt gctcgatcta gtggtatttt tatggggatt ctgtTtatcg CD 701 ctgtaggatt cctattcaag atcactgcag ttccttttca tatgtgggca CD 751 ccagatatct atgagggttc acccaccccg gttacagcat tcctttctat CD 801 tgcgcctaaa atctctattt ctgctaatat tttacgtgtt tTtatttatg CD 851 gttcctatgg agctacattg caacaaatct tctttttctg cagcattgct CD 901 tctatgatct taggagcact ggccgccatg gcccaaacga aagtcaaaag CD 951 acTtctagct Tatagttcaa ttggacatgt aggttatatt TgtaTtggtt CD 1001 tctcatgtgg aaccatagaa ggaattcaat cactactaat tggtatcttt CD 1051 atttatgcat taatgacgat ggatgcattc gccatagttt Tagcattacg CD 1101 gcaaacccgt gtcaaatata tagcggattt gggcgctcta gccaaaacga CD 1151 atcctatttT ggctattacc ttctccatta ctatgttctc atacgcagga CD 1201 atacccccgt tagccggctt ttgtagcaaa ttTtatttgt tcttcgccgc CD 1251 tttgggttgt ggggcttact ttctagccTT agtgggagta gtgactagcg CD 1301 ttataggtTg tttttattat atacgcttag tgaaaagaat gttttttgat CD 1351 acacctagga catggattct atatgaacca atggatcgta ataagtcgtt CD 1401 actactagca atgacttcct ttttcattac ttTatTcttg ctatacccct CD 1451 ctcctttgtt ctcagttact catcaaatgg cactcagttT atatctttaa SQ SEQUENCE 500 AA; MKAEFVRILP HMFNLFLAVF PEIFIINATF ILLIHGVVFS TSKKYDYPPL ASNVGWLGLL SVLITLLLLA AGAPLLTIAH LFWNNLFRRD NFTYFCQIFL LLSTAGTISM CFDFFDQERF DAFEFIVLIL LSTCGMLFMI SAYDLIAMYL AIELQSLCFY VIAASKRKSE FSTEAGLKYL ILGAFSSGIL LFGCSMIYGS TGATHFDQLA KILTGYEITG ARSSGIFMGI LFIAVGFLFK ITAVPFHMWA PDIYEGSPTP VTAFLSIAPK ISISANILRV FIYGSYGATL QQIFFFCSIA SMILGALAAM AQTKVKRLLA YSSIGHVGYI CIGFSCGTIE GIQSLLIGIF IYALMTMDAF AIVLALRQTR VKYIADLGAL AKTNPILAIT FSITMFSYAG IPPLAGFCSK FYLFFAALGC GAYFLALVGV VTSVIGCFYY IRLVKRMFFD TPRTWILYEP MDRNKSLLLA MTSFFITLFL LYPSPLFSVT HQMALSLYL* // ID X98254_1 STANDARD; PRT; 383 AA. AC X98254; DT Tue Jul 21 07:06:44 2009 DE A.thaliana mitochondrial orf577 gene. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Unpublished FT Full length CDS FT GENE : orf577 FT NOTE : N-terminal part FT LOCUS_TAG : FT PROTEIN_ID : CAA66908.1 FT PROTEIN_NAME : ccl1-like protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 346 - 1494 FT DIRECTIONS : positive FT EDITING : 15 P(cCg) -> L(cTg) FT EDITING : 35 P(cCt) -> L(cTt) FT EDITING : 48 S(tCg) -> L(tTg) FT EDITING : 53 P(Cct) -> S(Tct) FT EDITING : 67 P(cCt) -> L(cTt) FT EDITING : 88 R(Cgg) -> W(Tgg) FT EDITING : 90 P(cCa) -> L(cTa) FT EDITING : 97 L(Ctt) -> F(Ttt) FT EDITING : 114 H(Cat) -> Y(Tat) FT EDITING : 124 S(tCg) -> L(tTg) FT EDITING : 126 F(ttC) -> F(ttT) FT EDITING : 135 P(cCt) -> L(cTt) FT EDITING : 162 R(Cgt) -> C(Tgt) FT EDITING : 193 R(cgC) -> R(cgT) FT EDITING : 194 S(tCc) -> F(tTc) FT EDITING : 237 P(CCt) -> F(TTt) FT EDITING : 240 S(tCa) -> L(tTa) FT EDITING : 260 S(tCa) -> L(tTa) FT EDITING : 264 P(cCa) -> L(cTa) FT EDITING : 269 S(tCa) -> L(tTa) FT EDITING : 319 R(Cgc) -> C(Tgc) FT CODON_START : 1 CL CDNALEN 1149 NT; CD 1 atgtcaatat caatatatga attctttcat tattcgttat ttcCgggtct CD 51 tttcgttgca ttcacttaca acaagaaaca accaccagcg tttggtgcag CD 101 cacCtgcatt ttggtgcatt cttctttctt tccttggtct ttCgttctgt CD 151 catattCcta ataacttatc caattacaac gtattaaccg ctaatgcacC CD 201 tttcttttat caaatctcag gaacatggtc taatcatgag ggtagtattt CD 251 tattatggtg tCggatccCa aatttttatg gattttttCt ttgttaccgg CD 301 ggtcgacccc agagccataa tgtcttaaaa caaggaggcC atagggaaag CD 351 tctttttttt ttttttgtct CgaacttCgt gaagaactca attttatctc CD 401 tccCtcgtta cgaacaagaa agtggtttga aaaaccagtt gtacactccc CD 451 ttcgttctac gaacccttgt tgattctgaa cttCgttcgc gaaggaaccg CD 501 gacttttgac ggaccagccc ttttttatgc gccgctttat cctgaaagga CD 551 aaattaaaaa tcctctggac gcttggcgCt Cccgtggttc gcgagaagga CD 601 aaaaggactc atcctttgtt gcatctggca cgagatgata aagagagagc CD 651 ttcgtctatc gatgaacagc gaattgacgg agctcttggc attgctttgt CD 701 ttttctctCC tttcctatCa gcgagttccg atccttttgt tcgaaatttc CD 751 tttgtttgta ccgaaccgct tgcagaatCa aatcctgttc Cacaagatcc CD 801 tatatCagct atacatcctc cttgcattta tgccggggac gtcgccagtg CD 851 cggagggctt tggcttatgt agatcaaaaa tgatgaatgg gattgtggca CD 901 ctccactcgc cgccaatgcg gaaggatgcc gccgaaaaga atggaacgct CD 951 gcttCgctct gctggatgcg tcggatcccg tataacaagc gagcttttta CD 1001 ccctaaaatt caaacatgtg ggcgcaaaat gctatcctgc tctattgtta CD 1051 cgtagcaata gaagcccgct catgctgctt cggcggcgct ttttcgcctt CD 1101 ctcttcgttc tgggcaggag cgagaagcca ctcgactaaa aggtactga FT EDITED CDNA CD 1 atgtcaatat caatatatga attctttcat tattcgttat ttcTgggtct CD 51 tttcgttgca ttcacttaca acaagaaaca accaccagcg tttggtgcag CD 101 cacTtgcatt ttggtgcatt cttctttctt tccttggtct ttTgttctgt CD 151 catattTcta ataacttatc caattacaac gtattaaccg ctaatgcacT CD 201 tttcttttat caaatctcag gaacatggtc taatcatgag ggtagtattt CD 251 tattatggtg tTggatccTa aatttttatg gattttttTt ttgttaccgg CD 301 ggtcgacccc agagccataa tgtcttaaaa caaggaggcT atagggaaag CD 351 tctttttttt ttttttgtct TgaacttTgt gaagaactca attttatctc CD 401 tccTtcgtta cgaacaagaa agtggtttga aaaaccagtt gtacactccc CD 451 ttcgttctac gaacccttgt tgattctgaa cttTgttcgc gaaggaaccg CD 501 gacttttgac ggaccagccc ttttttatgc gccgctttat cctgaaagga CD 551 aaattaaaaa tcctctggac gcttggcgTt Tccgtggttc gcgagaagga CD 601 aaaaggactc atcctttgtt gcatctggca cgagatgata aagagagagc CD 651 ttcgtctatc gatgaacagc gaattgacgg agctcttggc attgctttgt CD 701 ttttctctTT tttcctatTa gcgagttccg atccttttgt tcgaaatttc CD 751 tttgtttgta ccgaaccgct tgcagaatTa aatcctgttc Tacaagatcc CD 801 tatatTagct atacatcctc cttgcattta tgccggggac gtcgccagtg CD 851 cggagggctt tggcttatgt agatcaaaaa tgatgaatgg gattgtggca CD 901 ctccactcgc cgccaatgcg gaaggatgcc gccgaaaaga atggaacgct CD 951 gcttTgctct gctggatgcg tcggatcccg tataacaagc gagcttttta CD 1001 ccctaaaatt caaacatgtg ggcgcaaaat gctatcctgc tctattgtta CD 1051 cgtagcaata gaagcccgct catgctgctt cggcggcgct ttttcgcctt CD 1101 ctcttcgttc tgggcaggag cgagaagcca ctcgactaaa aggtactga SQ SEQUENCE 383 AA; MSISIYEFFH YSLFLGLFVA FTYNKKQPPA FGAALAFWCI LLSFLGLLFC HISNNLSNYN VLTANALFFY QISGTWSNHE GSILLWCWIL NFYGFFFCYR GRPQSHNVLK QGGYRESLFF FFVLNFVKNS ILSLLRYEQE SGLKNQLYTP FVLRTLVDSE LCSRRNRTFD GPALFYAPLY PERKIKNPLD AWRFRGSREG KRTHPLLHLA RDDKERASSI DEQRIDGALG IALFFSFFLL ASSDPFVRNF FVCTEPLAEL NPVLQDPILA IHPPCIYAGD VASAEGFGLC RSKMMNGIVA LHSPPMRKDA AEKNGTLLCS AGCVGSRITS ELFTLKFKHV GAKCYPALLL RSNRSPLMLL RRRFFAFSSF WAGARSHSTK RY* // ID X98300_1 STANDARD; PRT; 677 AA. AC X98300; DT Tue Jul 21 07:06:44 2009 DE A.thaliana mitochondrial nad1 gene, exons 4 & 5, matr gene & nad5 OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Unpublished FT N-terminal not determined FT GENE : matR FT NOTE : intron-encoded FT LOCUS_TAG : FT PROTEIN_ID : CAA66945.1 FT PROTEIN_NAME : maturase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1180 - 3210 FT DIRECTIONS : positive FT EDITING : 31 S(tCc) -> F(tTc) FT EDITING : 85 P(Cca) -> S(Tca) FT EDITING : 99 S(tCc) -> F(tTc) FT EDITING : 129 P(cCa) -> L(cTa) FT EDITING : 581 S(tCc) -> F(tTc) FT EDITING : 588 P(cCt) -> L(cTt) FT EDITING : 595 R(Cgc) -> C(Tgc) FT EDITING : 607 H(Cac) -> Y(Tac) FT EDITING : 636 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 2031 NT; CD 1 agaaagaaag aagggttgaa gtttagaccg ctcacagtag ttctacctat CD 51 agaaaagatc atgaaagagg cgatcagaat ggtactcgaa tCcatttacg CD 101 atcccgagtt tccagacaca tcgcatttcc gctcgggtca aggctgccac CD 151 tcggtcctaa gacggatcaa agaagagtgg ggaatctctc gctggttttt CD 201 agaattcgac atcaggaagt gttttcacac catcgaccga catcgactca CD 251 tcCcaatttt gaaggaagag atcgacgatc ccaagttctt ttactCcatt CD 301 cagaaagtat tttccgccgg acgactcgta ggagttgaga ggggccctta CD 351 ctccgtccca cacagtgtac tactatcggc cctacCaggc aacatctacc CD 401 tacacaagct cgatcaggag atagggagga tccgacagaa gtacgaaatt CD 451 ccgattgttc agagagtcag atcggttcta ttaaggacag gtcgtcgtat CD 501 tgatgaccaa gaaaaccctg gagaagaagc aagcttcaac gctccccaag CD 551 acaacagagc catcattgtg gggagcgtta agagcatgca acgcaaagcg CD 601 gcctttcatt cccttgtttc gtcgtggcac acccccccca caagcaccct CD 651 ccggctcagg ggggaccaga aaaggccttt cgttttcccc ccttcgtcgg CD 701 cccttgccgt cttccttaac aagccctcga gccttctttg cgccgccttc CD 751 ctcatagaag ccgccgggtt gaccccgaag gctgaattct atggtggaga CD 801 acgctgtaat aataattggg ccatgagaga ccttcttaag tattgcaaaa CD 851 gaaagggcct gctgatagag ctgggcgggg aggcgatact agttatcagg CD 901 tcagagagag gcctggcccg taagcaggcc cccttaaaaa cccattactt CD 951 aataaggatt tgttacgcgc gatatgccga cgacttacta ctgggaatcg CD 1001 tgggtgccgt agagcttctc atagaaatac aaaaacgtat cgcccatttc CD 1051 ctacaatctg gcctgaacct ttgggtaggc tccgcaggat caacaacaat CD 1101 agctgcacgg agtacggtag aattccttgg tacggtcatt cgggaagtcc CD 1151 ctccgaggac gactcccata caatttttgc gagagctgga aaagcgtcta CD 1201 cgggtaaagc accgtatcca tataactgct tgccacctac gctccgccat CD 1251 ccattcaaag tttaggaacc taggtgatag tatcccgatc aaacagctga CD 1301 cgaaggggat gagcaaaaca gggagtctac aggacggggt tcaactagcg CD 1351 gagactcttg gaacagctgg agtcagaagt ccccaagtta gcgtattatg CD 1401 ggggaccgtc aagcacatcc ggcaaggatc aagggggatc tcgttcttgc CD 1451 atagctcagg tcggagcaac gcgtcatcgg acgttcaaca ggtagtctca CD 1501 cgatcgggca ctcatgcccg taagttgtca ttgtatactc ccccgggtcg CD 1551 gaaggcggcg ggggagggag gaggacactg ggcgggatct atcagcagcg CD 1601 aattccccat aaagatagag gcacctataa aaaagatact ccgaaggctt CD 1651 cgggatcgag gtatcattag ccgaagaaga ccctggccaa tccacgtggc CD 1701 ctgtttgacg aacgtcagcg acgaagacat cgtaaattgg tCcgcgggca CD 1751 tcgcgataag tcCtctgtcc tactacaggt gcCgcgacaa cctttatcaa CD 1801 gtccgaacga ttgtcgacCa ccagattcgc tggtctgcaa tattcaccct CD 1851 agcccacaag cacaaatcct cggcgcggaa tataatcctc aagtactcca CD 1901 aagactCaaa tattgtaaat caagaaggtg gcaagatcct tgcagagttc CD 1951 cccaacagca tagagcttgg gaagctcgga cccggtcaag acctgaacaa CD 2001 gaaggaacac tcaactacta gtctagtcta g FT EDITED CDNA CD 1 agaaagaaag aagggttgaa gtttagaccg ctcacagtag ttctacctat CD 51 agaaaagatc atgaaagagg cgatcagaat ggtactcgaa tTcatttacg CD 101 atcccgagtt tccagacaca tcgcatttcc gctcgggtca aggctgccac CD 151 tcggtcctaa gacggatcaa agaagagtgg ggaatctctc gctggttttt CD 201 agaattcgac atcaggaagt gttttcacac catcgaccga catcgactca CD 251 tcTcaatttt gaaggaagag atcgacgatc ccaagttctt ttactTcatt CD 301 cagaaagtat tttccgccgg acgactcgta ggagttgaga ggggccctta CD 351 ctccgtccca cacagtgtac tactatcggc cctacTaggc aacatctacc CD 401 tacacaagct cgatcaggag atagggagga tccgacagaa gtacgaaatt CD 451 ccgattgttc agagagtcag atcggttcta ttaaggacag gtcgtcgtat CD 501 tgatgaccaa gaaaaccctg gagaagaagc aagcttcaac gctccccaag CD 551 acaacagagc catcattgtg gggagcgtta agagcatgca acgcaaagcg CD 601 gcctttcatt cccttgtttc gtcgtggcac acccccccca caagcaccct CD 651 ccggctcagg ggggaccaga aaaggccttt cgttttcccc ccttcgtcgg CD 701 cccttgccgt cttccttaac aagccctcga gccttctttg cgccgccttc CD 751 ctcatagaag ccgccgggtt gaccccgaag gctgaattct atggtggaga CD 801 acgctgtaat aataattggg ccatgagaga ccttcttaag tattgcaaaa CD 851 gaaagggcct gctgatagag ctgggcgggg aggcgatact agttatcagg CD 901 tcagagagag gcctggcccg taagcaggcc cccttaaaaa cccattactt CD 951 aataaggatt tgttacgcgc gatatgccga cgacttacta ctgggaatcg CD 1001 tgggtgccgt agagcttctc atagaaatac aaaaacgtat cgcccatttc CD 1051 ctacaatctg gcctgaacct ttgggtaggc tccgcaggat caacaacaat CD 1101 agctgcacgg agtacggtag aattccttgg tacggtcatt cgggaagtcc CD 1151 ctccgaggac gactcccata caatttttgc gagagctgga aaagcgtcta CD 1201 cgggtaaagc accgtatcca tataactgct tgccacctac gctccgccat CD 1251 ccattcaaag tttaggaacc taggtgatag tatcccgatc aaacagctga CD 1301 cgaaggggat gagcaaaaca gggagtctac aggacggggt tcaactagcg CD 1351 gagactcttg gaacagctgg agtcagaagt ccccaagtta gcgtattatg CD 1401 ggggaccgtc aagcacatcc ggcaaggatc aagggggatc tcgttcttgc CD 1451 atagctcagg tcggagcaac gcgtcatcgg acgttcaaca ggtagtctca CD 1501 cgatcgggca ctcatgcccg taagttgtca ttgtatactc ccccgggtcg CD 1551 gaaggcggcg ggggagggag gaggacactg ggcgggatct atcagcagcg CD 1601 aattccccat aaagatagag gcacctataa aaaagatact ccgaaggctt CD 1651 cgggatcgag gtatcattag ccgaagaaga ccctggccaa tccacgtggc CD 1701 ctgtttgacg aacgtcagcg acgaagacat cgtaaattgg tTcgcgggca CD 1751 tcgcgataag tcTtctgtcc tactacaggt gcTgcgacaa cctttatcaa CD 1801 gtccgaacga ttgtcgacTa ccagattcgc tggtctgcaa tattcaccct CD 1851 agcccacaag cacaaatcct cggcgcggaa tataatcctc aagtactcca CD 1901 aagactTaaa tattgtaaat caagaaggtg gcaagatcct tgcagagttc CD 1951 cccaacagca tagagcttgg gaagctcgga cccggtcaag acctgaacaa CD 2001 gaaggaacac tcaactacta gtctagtcta g SQ SEQUENCE 677 AA; RKKEGLKFRP LTVVLPIEKI MKEAIRMVLE FIYDPEFPDT SHFRSGQGCH SVLRRIKEEW GISRWFLEFD IRKCFHTIDR HRLISILKEE IDDPKFFYFI QKVFSAGRLV GVERGPYSVP HSVLLSALLG NIYLHKLDQE IGRIRQKYEI PIVQRVRSVL LRTGRRIDDQ ENPGEEASFN APQDNRAIIV GSVKSMQRKA AFHSLVSSWH TPPTSTLRLR GDQKRPFVFP PSSALAVFLN KPSSLLCAAF LIEAAGLTPK AEFYGGERCN NNWAMRDLLK YCKRKGLLIE LGGEAILVIR SERGLARKQA PLKTHYLIRI CYARYADDLL LGIVGAVELL IEIQKRIAHF LQSGLNLWVG SAGSTTIAAR STVEFLGTVI REVPPRTTPI QFLRELEKRL RVKHRIHITA CHLRSAIHSK FRNLGDSIPI KQLTKGMSKT GSLQDGVQLA ETLGTAGVRS PQVSVLWGTV KHIRQGSRGI SFLHSSGRSN ASSDVQQVVS RSGTHARKLS LYTPPGRKAA GEGGGHWAGS ISSEFPIKIE APIKKILRRL RDRGIISRRR PWPIHVACLT NVSDEDIVNW FAGIAISLLS YYRCCDNLYQ VRTIVDYQIR WSAIFTLAHK HKSSARNIIL KYSKDLNIVN QEGGKILAEF PNSIELGKLG PGQDLNKKEH STTSLV* // ID X98302_1 STANDARD; PRT; 204 AA. AC X98302; DT Tue Jul 21 07:06:44 2009 DE A.thaliana mitochondrial orf577. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Unpublished FT N-terminal not determined FT GENE : orf577 FT NOTE : C-terminal part FT LOCUS_TAG : FT PROTEIN_ID : CAA66946.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 204 - 815 FT DIRECTIONS : positive FT EDITING : 22 S(tCg) -> L(tTg) FT EDITING : 59 P(cCa) -> L(cTa) FT EDITING : 70 R(Cgg) -> W(Tgg) FT EDITING : 76 R(Cgg) -> W(Tgg) FT EDITING : 87 R(Cgg) -> W(Tgg) FT EDITING : 93 R(Cgt) -> C(Tgt) FT EDITING : 107 S(tCg) -> L(tTg) FT EDITING : 115 P(cCa) -> L(cTa) FT EDITING : 118 V(gtC) -> V(gtT) FT EDITING : 119 S(tCa) -> L(tTa) FT EDITING : 131 P(Ccc) -> S(Tcc) FT CODON_START : 1 CL CDNALEN 612 NT; CD 1 gtggacacgg ggagggagca ggcgaagcgt gtcgttcgta atggaaagaa CD 51 agagaccact acttCgcctc tttgttggac cgccggcgcg aacacagtgg CD 101 tctctgatca ggaccaggaa ccaattcgaa tttggatctt gacatgttgg CD 151 tggtttttaa ccgtaggcat cttgcCagga agttggtggg cttatcatga CD 201 attaggtCgg ggtggctggt ggtttCggga tcccgtagaa aatgcttctt CD 251 ttatgcctCg ggtattagcc acagctCgta ttcattctgt aattttaccc CD 301 cttcttcatt cttggacctC gtttcttaat attgtgactt ttcCatgctg CD 351 tgtCtCagga accttttcaa tacggtccgg attgctagct Cccgttcata CD 401 gttttgctac agatgataca cgaggaatct ttttatggtg gttcttcctt CD 451 ctaatgaccg gcatatctat gattcttttc taccagatga agcagcaggc CD 501 atcggtccgt agaacgtata aaaaagagat ggttgtggcg cgaagtactc CD 551 ttgtgcatct acgtcactcg gctcgcgcgc aaccccgccc cgttatgtta CD 601 tggaagaatt ga FT EDITED CDNA CD 1 gtggacacgg ggagggagca ggcgaagcgt gtcgttcgta atggaaagaa CD 51 agagaccact acttTgcctc tttgttggac cgccggcgcg aacacagtgg CD 101 tctctgatca ggaccaggaa ccaattcgaa tttggatctt gacatgttgg CD 151 tggtttttaa ccgtaggcat cttgcTagga agttggtggg cttatcatga CD 201 attaggtTgg ggtggctggt ggtttTggga tcccgtagaa aatgcttctt CD 251 ttatgcctTg ggtattagcc acagctTgta ttcattctgt aattttaccc CD 301 cttcttcatt cttggacctT gtttcttaat attgtgactt ttcTatgctg CD 351 tgtTtTagga accttttcaa tacggtccgg attgctagct Tccgttcata CD 401 gttttgctac agatgataca cgaggaatct ttttatggtg gttcttcctt CD 451 ctaatgaccg gcatatctat gattcttttc taccagatga agcagcaggc CD 501 atcggtccgt agaacgtata aaaaagagat ggttgtggcg cgaagtactc CD 551 ttgtgcatct acgtcactcg gctcgcgcgc aaccccgccc cgttatgtta CD 601 tggaagaatt ga SQ SEQUENCE 204 AA; VDTGREQAKR VVRNGKKETT TLPLCWTAGA NTVVSDQDQE PIRIWILTCW WFLTVGILLG SWWAYHELGW GGWWFWDPVE NASFMPWVLA TACIHSVILP LLHSWTLFLN IVTFLCCVLG TFSIRSGLLA SVHSFATDDT RGIFLWWFFL LMTGISMILF YQMKQQASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML WKN* // ID X98679_1 STANDARD; PRT; 13 AA. AC X98679; DT Tue Jul 21 07:06:44 2009 DE L.eurolepis chloroplast DNA chlB gene. OS chloroplast Larix x marschlinsii OC Larix x marschlinsii RN [1] RL Curr. Genet. 31 (4), 343-347 (1997) RL PUBMED 9108142 FT N-terminal not determined FT C-terminal not determined FT GENE : chlB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA67237.1 FT PROTEIN_NAME : chloroplast subunit of light independent FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 38 FT DIRECTIONS : positive FT EDITING : 10 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 38 NT; CD 1 gaggatctaa aaaatttacc aaaagctCgg ttcaattt FT EDITED CDNA CD 1 gaggatctaa aaaatttacc aaaagctTgg ttcaattt SQ SEQUENCE 13 AA; EDLKNLPKAW FNX // ID X98680_1 STANDARD; PRT; 13 AA. AC X98680; DT Tue Jul 21 07:06:44 2009 DE L.eurolepis chloroplast RNA for light-independent OS chloroplast Larix x marschlinsii OC Larix x marschlinsii RN [1] RL Curr. Genet. 31 (4), 343-347 (1997) RL PUBMED 9108142 FT N-terminal not determined FT C-terminal not determined FT GENE : chlB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA67238.1 FT PROTEIN_NAME : chloroplast subunit of light independent FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 38 FT DIRECTIONS : positive FT EDITING : 10 W(Tgg) -> R(Cgg) FT CODON_START : 1 CL CDNALEN 38 NT; CD 1 gaggatctaa aaaatttacc aaaagctTgg ttcaattt FT EDITED CDNA CD 1 gaggatctaa aaaatttacc aaaagctCgg ttcaattt SQ SEQUENCE 13 AA; EDLKNLPKAR FNX // ID X98683_1 STANDARD; PRT; 13 AA. AC X98683; DT Tue Jul 21 07:06:44 2009 DE P.sylvestris chloroplast RNA for light-independent OS chloroplast Pinus sylvestris (Scots pine) OC Pinus sylvestris RN [1] RL Curr. Genet. 31 (4), 343-347 (1997) RL PUBMED 9108142 FT N-terminal not determined FT C-terminal not determined FT GENE : chlB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA67240.1 FT PROTEIN_NAME : chloroplast subunit of light independent FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 38 FT DIRECTIONS : positive FT EDITING : 3 L(cTg) -> P(cCg) FT CODON_START : 1 CL CDNALEN 38 NT; CD 1 gaggatcTga aaaatttacc gaaagctcgg ttcaattt FT EDITED CDNA CD 1 gaggatcCga aaaatttacc gaaagctcgg ttcaattt SQ SEQUENCE 13 AA; EDPKNLPKAR FNX // ID X98684_1 STANDARD; PRT; 13 AA. AC X98684; DT Tue Jul 21 07:06:44 2009 DE P.sylvestris chloroplast RNA for light-independent OS chloroplast Pinus sylvestris (Scots pine) OC Pinus sylvestris RN [1] RL Curr. Genet. 31 (4), 343-347 (1997) RL PUBMED 9108142 FT N-terminal not determined FT C-terminal not determined FT GENE : chlB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA67241.1 FT PROTEIN_NAME : chloroplast subunit of light independent FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 38 FT DIRECTIONS : positive FT EDITING : 3 L(cTg) -> P(cCg) FT EDITING : 10 W(Tgg) -> R(Cgg) FT CODON_START : 1 CL CDNALEN 38 NT; CD 1 gaggatcTga aaaatttacc gaaagctTgg ttcaattt FT EDITED CDNA CD 1 gaggatcCga aaaatttacc gaaagctCgg ttcaattt SQ SEQUENCE 13 AA; EDPKNLPKAR FNX // ID PADCHLB_1 STANDARD; PRT; 13 AA. AC X98685; DT Tue Jul 21 07:06:44 2009 DE Picea abies chloroplast chlB gene protochlorophyllide reductase. OS chloroplast Picea abies (Norway spruce) OC Picea abies RN [1] RL Curr. Genet. 31 (4), 343-347 (1997) RL PUBMED 9108142 FT N-terminal not determined FT C-terminal not determined FT GENE : chlB FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAA67242.3 FT PROTEIN_NAME : chloroplast subunit of light independent FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 38 FT DIRECTIONS : positive FT EDITING : 3 S(tCa) -> L(tTa) FT EDITING : 10 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 38 NT; CD 1 gaggattCaa aaaatttacc aaaagctCgg ttcaattt FT EDITED CDNA CD 1 gaggattTaa aaaatttacc aaaagctTgg ttcaattt SQ SEQUENCE 13 AA; EDLKNLPKAW FNX // ID X98686_1 STANDARD; PRT; 13 AA. AC X98686; DT Tue Jul 21 07:06:44 2009 DE P.abies chloroplast RNA for light-independent protochlorophyllide OS chloroplast Larix x marschlinsii OC Larix x marschlinsii RN [1] RL Curr. Genet. 31 (4), 343-347 (1997) RL PUBMED 9108142 FT N-terminal not determined FT C-terminal not determined FT GENE : chlB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA67244.1 FT PROTEIN_NAME : chloroplast subunit of light independent FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 38 FT DIRECTIONS : positive FT EDITING : 3 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 38 NT; CD 1 gaggattCaa aaaatttacc aaaagctcgg ttcaattt FT EDITED CDNA CD 1 gaggattTaa aaaatttacc aaaagctcgg ttcaattt SQ SEQUENCE 13 AA; EDLKNLPKAR FNX // ID X98687_1 STANDARD; PRT; 13 AA. AC X98687; DT Tue Jul 21 07:06:44 2009 DE P.abies chloroplast RNA for light-independent protochlorophyllide OS chloroplast Larix x marschlinsii OC Larix x marschlinsii RN [1] RL Curr. Genet. 31 (4), 343-347 (1997) RL PUBMED 9108142 FT N-terminal not determined FT C-terminal not determined FT GENE : chlB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA67245.1 FT PROTEIN_NAME : chloroplast subunit of light independent FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 38 FT DIRECTIONS : positive FT EDITING : 3 L(tTa) -> S(tCa) FT EDITING : 10 W(Tgg) -> R(Cgg) FT CODON_START : 1 CL CDNALEN 38 NT; CD 1 gaggattTaa aaaatttacc aaaagctTgg ttcaattt FT EDITED CDNA CD 1 gaggattCaa aaaatttacc aaaagctCgg ttcaattt SQ SEQUENCE 13 AA; EDSKNLPKAR FNX // ID X99020_1 STANDARD; PRT; 510 AA. AC X99020; DT Tue Jul 21 07:06:44 2009 DE Secale cereale mitochondrial atpA & atp9 genes. OS mitochondrion Secale cereale (rye) OC Secale cereale RN [1] RL Unpublished FT Full length CDS FT GENE : atpA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA67492.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 658 - 2187 FT DIRECTIONS : positive FT EDITING : 10 L(ctC) -> L(ctT) FT CODON_START : 1 CL CDNALEN 1530 NT; CD 1 atggaattct cacccagagc tgcggaactC acgactctat tagaaagtag CD 51 aatgaccaac ttttacacga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacgtgttt atggattgaa cgagattcaa CD 151 gcaggagaaa tggtggaatt tgccagcggt gtgaaaggaa tcgccttaaa CD 201 tcttgagaat gagaatgtag gtattgttgt ctttggtagt gataccgcta CD 251 ttaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gcgggaaagg ccatgttagg ccgtgtggtc gacgccttgg gagtacctat CD 351 tgatggaaaa ggggctctaa gcgatcacga acgaagacgt gtcgaagtga CD 401 aagccccagg gattattgaa cgtaaatctg tgcacgaacc catgcaaaca CD 451 ggcttaaaag cagtggatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttataatc ggggacagac aaactggaaa aactgcaata gctatcgata CD 551 ctatattaaa ccaaaagcaa atgaactcaa ggggcacaaa tgagagtgag CD 601 acattgtatt gtgtctatgt tgcgattgga caaaaacgct cgactgtggc CD 651 acaattagtt caaattcttt cagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctctgcaatt tctggcccca CD 751 tattcagggt gtgccatggg ggaatatttc cgcgataatg gaatgcacgc CD 801 attaattata tatgatgatc taagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggggat CD 901 gttttctatt tacattcccg tctcttagaa agagccgcta aacgatcgga CD 951 ccagacaggt gcaggtagct cgactgcgtt acccgtgatt gaaacacaag CD 1001 ctggagacgt atcggcctat atccccacca atgtgatctc cattacagat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagaccagc CD 1101 tattaacgtt ggcttatccg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtctgc ggtagttcaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgccttcgc tcaatttggg tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct tacagaagtg cccaaacaac CD 1301 cacaatatga accacttcca attgaaaaac aaattgttgt gatttatgct CD 1351 gctgtcaacg gcttctgtga tcgaatgcca ctagacagaa tttctcaata CD 1401 tgaaaaagcc attctaagta ctattaatcc agaattacaa aaatccttct CD 1451 tagaaaaagg tggcttaact aacgaaagaa agatggaacc agatgcttct CD 1501 ttaaaagaaa gcactttgcc ttacctgtga FT EDITED CDNA CD 1 atggaattct cacccagagc tgcggaactT acgactctat tagaaagtag CD 51 aatgaccaac ttttacacga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacgtgttt atggattgaa cgagattcaa CD 151 gcaggagaaa tggtggaatt tgccagcggt gtgaaaggaa tcgccttaaa CD 201 tcttgagaat gagaatgtag gtattgttgt ctttggtagt gataccgcta CD 251 ttaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttcct CD 301 gcgggaaagg ccatgttagg ccgtgtggtc gacgccttgg gagtacctat CD 351 tgatggaaaa ggggctctaa gcgatcacga acgaagacgt gtcgaagtga CD 401 aagccccagg gattattgaa cgtaaatctg tgcacgaacc catgcaaaca CD 451 ggcttaaaag cagtggatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttataatc ggggacagac aaactggaaa aactgcaata gctatcgata CD 551 ctatattaaa ccaaaagcaa atgaactcaa ggggcacaaa tgagagtgag CD 601 acattgtatt gtgtctatgt tgcgattgga caaaaacgct cgactgtggc CD 651 acaattagtt caaattcttt cagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctctgcaatt tctggcccca CD 751 tattcagggt gtgccatggg ggaatatttc cgcgataatg gaatgcacgc CD 801 attaattata tatgatgatc taagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggggat CD 901 gttttctatt tacattcccg tctcttagaa agagccgcta aacgatcgga CD 951 ccagacaggt gcaggtagct cgactgcgtt acccgtgatt gaaacacaag CD 1001 ctggagacgt atcggcctat atccccacca atgtgatctc cattacagat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagaccagc CD 1101 tattaacgtt ggcttatccg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtctgc ggtagttcaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgccttcgc tcaatttggg tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct tacagaagtg cccaaacaac CD 1301 cacaatatga accacttcca attgaaaaac aaattgttgt gatttatgct CD 1351 gctgtcaacg gcttctgtga tcgaatgcca ctagacagaa tttctcaata CD 1401 tgaaaaagcc attctaagta ctattaatcc agaattacaa aaatccttct CD 1451 tagaaaaagg tggcttaact aacgaaagaa agatggaacc agatgcttct CD 1501 ttaaaagaaa gcactttgcc ttacctgtga SQ SEQUENCE 510 AA; MEFSPRAAEL TTLLESRMTN FYTNFQVDEI GRVVSVGDGI ARVYGLNEIQ AGEMVEFASG VKGIALNLEN ENVGIVVFGS DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DALGVPIDGK GALSDHERRR VEVKAPGIIE RKSVHEPMQT GLKAVDSLVP IGRGQRELII GDRQTGKTAI AIDTILNQKQ MNSRGTNESE TLYCVYVAIG QKRSTVAQLV QILSEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSSTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSSKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV PKQPQYEPLP IEKQIVVIYA AVNGFCDRMP LDRISQYEKA ILSTINPELQ KSFLEKGGLT NERKMEPDAS LKESTLPYL* // ID X99020_2 STANDARD; PRT; 81 AA. AC X99020; DT Tue Jul 21 07:06:44 2009 DE Secale cereale mitochondrial atpA & atp9 genes. OS mitochondrion Secale cereale (rye) OC Secale cereale RN [1] RL Unpublished FT Full length CDS FT GENE : atp9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA67493.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 2650 - 2892 FT DIRECTIONS : positive FT EDITING : 7 S(tCa) -> L(tTa) FT EDITING : 27 V(gtC) -> V(gtT) FT EDITING : 28 L(Ctc) -> F(Ttc) FT EDITING : 45 S(tCa) -> L(tTa) FT EDITING : 64 P(cCa) -> L(cTa) FT EDITING : 69 L(Ctg) -> L(Ttg) FT EDITING : 71 S(tCa) -> L(tTa) FT EDITING : 75 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 243 NT; CD 1 atgttagaag gtgctaaatC aataggtgcc ggagctgcta caattgcttt CD 51 agccggagct gctgtcggta ttggaaacgt CCtcagttct ttgattcatt CD 101 ccgtggcgcg aaatccatca ttggctaaac aatCatttgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca ttgtttgccc Caatgatggc CD 201 ctttCtgatc tCattcgttt tcCgatcgca taaaaagtca tga FT EDITED CDNA CD 1 atgttagaag gtgctaaatT aataggtgcc ggagctgcta caattgcttt CD 51 agccggagct gctgtcggta ttggaaacgt TTtcagttct ttgattcatt CD 101 ccgtggcgcg aaatccatca ttggctaaac aatTatttgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca ttgtttgccc Taatgatggc CD 201 ctttTtgatc tTattcgttt tcTgatcgca taaaaagtca tga SQ SEQUENCE 81 AA; MLEGAKLIGA GAATIALAGA AVGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI LFVF*SHKKS * // ID Y07911_1 STANDARD; PRT; 88 AA. AC Y07911; DT Tue Jul 21 07:06:44 2009 DE M.drummondii mitochondrial nad2 gene. OS mitochondrion Marsilea drummondii OC Marsilea drummondii RN [1] RL RNA 4 (12), 1599-1609 (1998) RL PUBMED 9848656 FT N-terminal not determined FT C-terminal not determined FT GENE : nad2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69218.1 FT PROTEIN_NAME : NADH dehydrogenase FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 40/2 FT EDITING : 41 R(Cgt) -> C(Tgt) FT CODON_START : 1 CL CDNALEN 264 NT; CD 1 cttcaaagtt tatgttttta tgtgatcgca gccttgaaga gagactccga CD 51 attttccacg gaagccggcc taaaatattt cattttaggt gcattctcct CD 101 ccggaatatt attgtttggt Cgttctatga tctatgggtc tactggaatc CD 151 actaactttg aagaattagc caagattttc actggatatg aaatcacttt CD 201 gctcagtgct cagtctagtg gtatctttat ggggatccta ttcattgctg CD 251 taggtttctt attc FT EDITED CDNA CD 1 cttcaaagtt tatgttttta tgtgatcgca gccttgaaga gagactccga CD 51 attttccacg gaagccggcc taaaatattt cattttaggt gcattctcct CD 101 ccggaatatt attgtttggt Tgttctatga tctatgggtc tactggaatc CD 151 actaactttg aagaattagc caagattttc actggatatg aaatcacttt CD 201 gctcagtgct cagtctagtg gtatctttat ggggatccta ttcattgctg CD 251 taggtttctt attc SQ SEQUENCE 88 AA; LQSLCFYVIA ALKRDSEFST EAGLKYFILG AFSSGILLFG CSMIYGSTGI TNFEELAKIF TGYEITLLSA QSSGIFMGIL FIAVGFLF // ID Y08501_6 STANDARD; PRT; 670 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : nad5 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69752.3 FT PROTEIN_NAME : NADH dehydrogenase subunit 5 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 77/2 FT INTRON 483/0 FT INTRON 490/1 FT INTRON 622/0 FT EDITING : 497 P(cCc) -> L(cTc) FT EDITING : 517 T(aCc) -> I(aTc) FT EDITING : 527 S(tCa) -> L(tTa) FT EDITING : 632 S(tCa) -> L(tTa) FT EDITING : 639 S(tCt) -> F(tTt) FT EDITING : 640 R(Cgt) -> C(Tgt) FT EDITING : 643 D(gaC) -> D(gaT) FT EDITING : 653 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 2010 NT; CD 1 atgtatctac ttatcgtatt tttgcccctg ctcggtagtt ccgtagcagg CD 51 ttttttcgga cgttttctag gatcagaagg aagcgctata atgaccacta CD 101 cgtgcgtttc attctcttcg atcttatctt tgattgcttt ttatgaagtc CD 151 gcaccgggag ctagtgcttg ctatctaaga attgctccat ggatctcatc CD 201 ggaaatgttt gatgcttctt ggggcttctt gttcgatagc ccgaccgtag CD 251 tgatgttaat tgtggttaca tccataagta gcttggtcca tctttattcc CD 301 atttcatata tgtccgagga tccgcatagc cctcgattta tgtgttattt CD 351 atccattctt acttttttta tgccaatgtt ggtgactgga gataactctc CD 401 ttcaattatt cctgggatgg gagggagtag gtcttgcttc atatttgtta CD 451 attcattttt ggtttacacg acttcaggca gataaagcag ctacaaaagc CD 501 tatgcttgtc aatcgagtag gtgattttgg attagctctt gggatttcgg CD 551 gtcgttttac tctctttcaa acagtagact tttcaaccat ttttgctcgt CD 601 gctagtgccc ccagaaattc ttggatttct tgcaatatga gattgaatgc CD 651 cataagtctt atttgtattt tacttcttat tggtgctgtt gggaaatccg CD 701 cgcagatagg atcgcatact tggtcacccg atgctatgga gggtcccact CD 751 ccagtatccg cttcgattca tgcagctact atggtaacag ctggcgtttt CD 801 catgatagca aggtgctccc ctttatttga atacccacct acggctttga CD 851 ttgttattac ttctgcagga gctacgacgt cattccttgc ggcaaccact CD 901 ggaatattac agaacgatct aaagagggtc atcgcttatt caacttgtag CD 951 tcaattaggc tatatgatct ttgcttgcgg catctctaac tattcggtta CD 1001 gcgtctttca cttaatgaat cacgcctttt tcaaagcatt actattcctg CD 1051 agtgctggtt cggtgattca tgccatgtcg gatgagcaag atatgcggaa CD 1101 gatggggggg cttgcctcct ccttcccttt gacctatgcc atgatgctca CD 1151 taggcagctt atctctaatt ggatttcctt ttctaactgg attttattcc CD 1201 aaagatgtga tcttagagct cgcttacact aagtatacca tcagtgggaa CD 1251 ctttgctttc tggttgggaa gtgtctctgt ccttttcact tcttattact CD 1301 cttttcgttt actttttcta acatttctag taccaactaa ttcgttcggg CD 1351 cgagacatct cacgatgtca tgatgcgccc attcctatgg ccattccttt CD 1401 aatacttctg gctctcggga gtctctttgt aggatacttg gccaaagata CD 1451 tgatgattgg tttaggtacc aatttttggg ccaattcccC cctcgtacta CD 1501 ccaaaaaatg agattcttgc cgaatccgag tttgctgctc caaccattaC CD 1551 caaactaata cctattctgt ttagtacttC aggtgctttt gttgcgtata CD 1601 atgtaaatcc cgtagcggat caattccaac gagcctttca aactagtact CD 1651 ttttgtaatc gactctatag cttcttcaat aaacgctggt tcttcgatca CD 1701 agttttgaat gactttctag tcagatcgtt cctgcgtttc ggatatgaag CD 1751 tctcattcga agctttagac aaaggtgcta ttgagatatt gggcccttat CD 1801 ggtatctcgt acacattccg acgattggcc gagcgaataa gtcaacttca CD 1851 aagtggattt gtttatcatt atgcctttgc aatgttactt ggttCaactc CD 1901 tatttgtgac cttttCtCgt atgtgggaCt ctctatcttc ttgggtagat CD 1951 aatcgatCgt ctttcatttt gatagtgagt agtttttata caaagtcaag CD 2001 tcaagaataa FT EDITED CDNA CD 1 atgtatctac ttatcgtatt tttgcccctg ctcggtagtt ccgtagcagg CD 51 ttttttcgga cgttttctag gatcagaagg aagcgctata atgaccacta CD 101 cgtgcgtttc attctcttcg atcttatctt tgattgcttt ttatgaagtc CD 151 gcaccgggag ctagtgcttg ctatctaaga attgctccat ggatctcatc CD 201 ggaaatgttt gatgcttctt ggggcttctt gttcgatagc ccgaccgtag CD 251 tgatgttaat tgtggttaca tccataagta gcttggtcca tctttattcc CD 301 atttcatata tgtccgagga tccgcatagc cctcgattta tgtgttattt CD 351 atccattctt acttttttta tgccaatgtt ggtgactgga gataactctc CD 401 ttcaattatt cctgggatgg gagggagtag gtcttgcttc atatttgtta CD 451 attcattttt ggtttacacg acttcaggca gataaagcag ctacaaaagc CD 501 tatgcttgtc aatcgagtag gtgattttgg attagctctt gggatttcgg CD 551 gtcgttttac tctctttcaa acagtagact tttcaaccat ttttgctcgt CD 601 gctagtgccc ccagaaattc ttggatttct tgcaatatga gattgaatgc CD 651 cataagtctt atttgtattt tacttcttat tggtgctgtt gggaaatccg CD 701 cgcagatagg atcgcatact tggtcacccg atgctatgga gggtcccact CD 751 ccagtatccg cttcgattca tgcagctact atggtaacag ctggcgtttt CD 801 catgatagca aggtgctccc ctttatttga atacccacct acggctttga CD 851 ttgttattac ttctgcagga gctacgacgt cattccttgc ggcaaccact CD 901 ggaatattac agaacgatct aaagagggtc atcgcttatt caacttgtag CD 951 tcaattaggc tatatgatct ttgcttgcgg catctctaac tattcggtta CD 1001 gcgtctttca cttaatgaat cacgcctttt tcaaagcatt actattcctg CD 1051 agtgctggtt cggtgattca tgccatgtcg gatgagcaag atatgcggaa CD 1101 gatggggggg cttgcctcct ccttcccttt gacctatgcc atgatgctca CD 1151 taggcagctt atctctaatt ggatttcctt ttctaactgg attttattcc CD 1201 aaagatgtga tcttagagct cgcttacact aagtatacca tcagtgggaa CD 1251 ctttgctttc tggttgggaa gtgtctctgt ccttttcact tcttattact CD 1301 cttttcgttt actttttcta acatttctag taccaactaa ttcgttcggg CD 1351 cgagacatct cacgatgtca tgatgcgccc attcctatgg ccattccttt CD 1401 aatacttctg gctctcggga gtctctttgt aggatacttg gccaaagata CD 1451 tgatgattgg tttaggtacc aatttttggg ccaattcccT cctcgtacta CD 1501 ccaaaaaatg agattcttgc cgaatccgag tttgctgctc caaccattaT CD 1551 caaactaata cctattctgt ttagtacttT aggtgctttt gttgcgtata CD 1601 atgtaaatcc cgtagcggat caattccaac gagcctttca aactagtact CD 1651 ttttgtaatc gactctatag cttcttcaat aaacgctggt tcttcgatca CD 1701 agttttgaat gactttctag tcagatcgtt cctgcgtttc ggatatgaag CD 1751 tctcattcga agctttagac aaaggtgcta ttgagatatt gggcccttat CD 1801 ggtatctcgt acacattccg acgattggcc gagcgaataa gtcaacttca CD 1851 aagtggattt gtttatcatt atgcctttgc aatgttactt ggttTaactc CD 1901 tatttgtgac cttttTtTgt atgtgggaTt ctctatcttc ttgggtagat CD 1951 aatcgatTgt ctttcatttt gatagtgagt agtttttata caaagtcaag CD 2001 tcaagaataa SQ SEQUENCE 670 AA; MYLLIVFLPL LGSSVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV APGASACYLR IAPWISSEMF DASWGFLFDS PTVVMLIVVT SISSLVHLYS ISYMSEDPHS PRFMCYLSIL TFFMPMLVTG DNSLQLFLGW EGVGLASYLL IHFWFTRLQA DKAATKAMLV NRVGDFGLAL GISGRFTLFQ TVDFSTIFAR ASAPRNSWIS CNMRLNAISL ICILLLIGAV GKSAQIGSHT WSPDAMEGPT PVSASIHAAT MVTAGVFMIA RCSPLFEYPP TALIVITSAG ATTSFLAATT GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPLTYA MMLIGSLSLI GFPFLTGFYS KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDISRCHDAP IPMAIPLILL ALGSLFVGYL AKDMMIGLGT NFWANSLLVL PKNEILAESE FAAPTIIKLI PILFSTLGAF VAYNVNPVAD QFQRAFQTST FCNRLYSFFN KRWFFDQVLN DFLVRSFLRF GYEVSFEALD KGAIEILGPY GISYTFRRLA ERISQLQSGF VYHYAFAMLL GLTLFVTFFC MWDSLSSWVD NRLSFILIVS SFYTKSSQE* // ID Y08501_7 STANDARD; PRT; 191 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : nad9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69753.3 FT PROTEIN_NAME : NADH dehydrogenase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 23663 - 24235 FT DIRECTIONS : negative FT EDITING : 31 S(tCt) -> F(tTt) FT EDITING : 56 S(tCg) -> L(tTg) FT EDITING : 64 H(Cat) -> Y(Tat) FT EDITING : 100 P(Ccg) -> S(Tcg) FT EDITING : 110 R(Cgg) -> W(Tgg) FT EDITING : 133 S(tCa) -> L(tTa) FT EDITING : 147 L(Ctt) -> F(Ttt) FT CODON_START : 1 CL CDNALEN 573 NT; CD 1 atggataacc aattcatttt caaatatagt tgggagactt tacccaagaa CD 51 atgggtcaaa aaaatggaaa gatcggaaca tgggaataga tCtgatacca CD 101 atacggacta cctatttcaa ttgttgtgct ttctcaaatt gcatacctat CD 151 acaagggttc aagtttCgat cgatatttgc ggagttgatC atccctctcg CD 201 aaaacgaaga tttgaagtgg tctataattt actgagtact cggtataact CD 251 cacgcattcg tgtacaaacc agtgcagacg aagtaacacg aatatctCcg CD 301 gtagtaagtc tatttccatc agccggcCgg tgggagcgag aagtttggga CD 351 tatgtttggt gtttctttca tcaatcatcc ggatctacgc cgtatatCaa CD 401 ctgattatgg tttcgagggt catccattac gaaaagacCt tcctctgagt CD 451 ggatatgtcc aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 acccattgag atgacccaag aatttcgcta tttcgatttt gctagtcctt CD 551 gggaacagcg tagcgacgga taa FT EDITED CDNA CD 1 atggataacc aattcatttt caaatatagt tgggagactt tacccaagaa CD 51 atgggtcaaa aaaatggaaa gatcggaaca tgggaataga tTtgatacca CD 101 atacggacta cctatttcaa ttgttgtgct ttctcaaatt gcatacctat CD 151 acaagggttc aagtttTgat cgatatttgc ggagttgatT atccctctcg CD 201 aaaacgaaga tttgaagtgg tctataattt actgagtact cggtataact CD 251 cacgcattcg tgtacaaacc agtgcagacg aagtaacacg aatatctTcg CD 301 gtagtaagtc tatttccatc agccggcTgg tgggagcgag aagtttggga CD 351 tatgtttggt gtttctttca tcaatcatcc ggatctacgc cgtatatTaa CD 401 ctgattatgg tttcgagggt catccattac gaaaagacTt tcctctgagt CD 451 ggatatgtcc aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 acccattgag atgacccaag aatttcgcta tttcgatttt gctagtcctt CD 551 gggaacagcg tagcgacgga taa SQ SEQUENCE 191 AA; MDNQFIFKYS WETLPKKWVK KMERSEHGNR FDTNTDYLFQ LLCFLKLHTY TRVQVLIDIC GVDYPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISS VVSLFPSAGW WEREVWDMFG VSFINHPDLR RILTDYGFEG HPLRKDFPLS GYVQVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG * // ID Y08501_8 STANDARD; PRT; 180 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : rpl16 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69754.3 FT PROTEIN_NAME : ribosomal protein L16 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 25076 - 25615 FT DIRECTIONS : negative FT EDITING : 70 T(aCt) -> I(aTt) FT EDITING : 77 R(Cgt) -> C(Tgt) FT EDITING : 147 P(cCa) -> L(cTa) FT EDITING : 169 P(cCa) -> L(cTa) FT EDITING : 171 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 540 NT; CD 1 atgtatttaa ccataaaatc gattatgctc ctgcggaagt atctactcgt CD 51 tacggaatct caggtgtcaa agtgtggatt tcatatagtc aaaaaaaagg CD 101 gagacgtgct atatccgaaa cgtacgaaat atagtaaata tcgtaaaggc CD 151 agatgtagta ggggttgcaa accggatggt acaaaactgg gttttggaag CD 201 atatggcaCt aaaagttgta aagctggtCg tctttcatat cgagccattg CD 251 aagcagcgcg tcgggctata atcggacact ttcatcgtgc tatgagcgga CD 301 caattccgaa gaaatggtaa gatatgggta agagttttcg cggatctccc CD 351 tattaccggg aaacccacag aagtaagaat gggaagagga aaaggaaatc CD 401 ctacgggttg gattgctcgt gtgtccacgg gacaaatccC atttgaaatg CD 451 gatggtgtga gtttggcaaa tgctcgacaa gccgctacat tagcggctca CD 501 taaacCatgt tCgtcaacca agtttgttca gtggtcgtaa FT EDITED CDNA CD 1 atgtatttaa ccataaaatc gattatgctc ctgcggaagt atctactcgt CD 51 tacggaatct caggtgtcaa agtgtggatt tcatatagtc aaaaaaaagg CD 101 gagacgtgct atatccgaaa cgtacgaaat atagtaaata tcgtaaaggc CD 151 agatgtagta ggggttgcaa accggatggt acaaaactgg gttttggaag CD 201 atatggcaTt aaaagttgta aagctggtTg tctttcatat cgagccattg CD 251 aagcagcgcg tcgggctata atcggacact ttcatcgtgc tatgagcgga CD 301 caattccgaa gaaatggtaa gatatgggta agagttttcg cggatctccc CD 351 tattaccggg aaacccacag aagtaagaat gggaagagga aaaggaaatc CD 401 ctacgggttg gattgctcgt gtgtccacgg gacaaatccT atttgaaatg CD 451 gatggtgtga gtttggcaaa tgctcgacaa gccgctacat tagcggctca CD 501 taaacTatgt tTgtcaacca agtttgttca gtggtcgtaa SQ SEQUENCE 180 AA; MYLTIKSIML LRKYLLVTES QVSKCGFHIV KKKGDVLYPK RTKYSKYRKG RCSRGCKPDG TKLGFGRYGI KSCKAGCLSY RAIEAARRAI IGHFHRAMSG QFRRNGKIWV RVFADLPITG KPTEVRMGRG KGNPTGWIAR VSTGQILFEM DGVSLANARQ AATLAAHKLC LSTKFVQWS* // ID Y08501_9 STANDARD; PRT; 557 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : rps3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69755.3 FT PROTEIN_NAME : ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 26/0 FT EDITING : 22 R(Cgg) -> W(Tgg) FT EDITING : 42 F(ttC) -> F(ttT) FT EDITING : 63 L(Cta) -> L(Tta) FT EDITING : 172 S(tCa) -> L(tTa) FT EDITING : 201 F(ttC) -> F(ttT) FT EDITING : 296 S(tCg) -> L(tTg) FT EDITING : 448 S(agC) -> S(agT) FT EDITING : 451 P(cCg) -> L(cTg) FT EDITING : 490 S(tcC) -> S(tcT) FT EDITING : 512 R(Cgt) -> C(Tgt) FT EDITING : 524 A(gCg) -> V(gTg) FT EDITING : 527 S(tCt) -> F(tTt) FT EDITING : 533 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1671 NT; CD 1 atggcacgaa aaggaaatcc gatttcggta agacttggaa aaaatcgtag CD 51 ttcagattca agtCggttca gtgagtatta ttatggtaaa tttgtgtatc CD 101 aagatgtcaa tctgagatct tatttCggtt cgatacgtcc acctacgaga CD 151 ctcaccttcg gctttcgtct cggtaggtgt attattCtac attttcctaa CD 201 aagaacattc attcatttct ttcttccccg tcgaccacga cgactgaaac CD 251 gacgtgaaaa aactagaccc ggaaaggaga agggccggtg gtggacgaca CD 301 ttcgggaaag ccgggccgat cgagtgtctt cattcaagcg acgatacaga CD 351 agaagaacga aacgaagtga gaggccgggg ggcaaggaaa agagtcgagt CD 401 cgatcaggct cgacgaccga aaaaagcaaa acgaaatccg gggttggccg CD 451 aaaaaaaaac aacgctatgg ataccatgac cgattaccct cgataaagaa CD 501 gaatctttct aaatCacttc ggatcagcgg ggccttcaag catccgaaat CD 551 acgccggggt tgtaaatgac atagcgttcc tgatagaaaa tgacgactcc CD 601 ttCaaaaaaa cgaagttatt caagttattt ttccaaaata agtcccgctc CD 651 cgacggcccg acgagttatc tacggaccct ccctgcagtg cgcccctcct CD 701 tgaatttttt ggtcatgcaa tactttttta atacaaagaa ccaaattaat CD 751 ttcgaccccg tcgtagttct caatcatttc gtggcaccgg gcgccgctga CD 801 accatctacg atggggagag cgaatgcaca gggaagaagc ttacagaaga CD 851 gaatacgttc tcgtatcgct ttttttgtag aaagctCgac cagcgagaaa CD 901 aagtgtttgg ccgaagccaa aaataggttg acccacttca ttcgcttggc CD 951 gaatgatctt cgcttcgcgg gaacaactaa aaccaccatc tcgctctttc CD 1001 cattcttcgg tgctaccttt ttctttctaa gagatggggt tggggtgtat CD 1051 aataaccttg atgctcggga acaactcctc aatcaattaa gggtcaaatg CD 1101 ttggaacctc gtgggtaagg ataagataat ggaattgata gagaaattaa CD 1151 aaaacctagg tgggatagaa gaattgataa aggtaataga tatgatgata CD 1201 gagatcatac tgagaaagag aggaattccg tacaggtaca actcttattt CD 1251 ttacgaagtc aaaaaaatgc gatctttctt gtctaataga acaaacacta CD 1301 agaccttaat tgagtcagtc aaaataaaat ctgtttatca aagCgcttct CD 1351 cCgattgctc aagacatctc ttttcaactg aagaacaaaa gaagatcatt CD 1401 tcattccatt tttgctaaaa tagtgaagga gattccaaaa ggggtggagg CD 1451 gaatccgtat atgtttttcC ggtcgattaa aagacgcagc agaaaaagct CD 1501 caaactaaat gctataagca tagaaaaact tctCgtaatg tatttaacca CD 1551 taaaatcgat tatgctcctg CggaagtatC tactcgttac ggaatctCag CD 1601 gtgtcaaagt gtggatttca tatagtcaaa aaaaagggag acgtgctata CD 1651 tccgaaacgt acgaaatata g FT EDITED CDNA CD 1 atggcacgaa aaggaaatcc gatttcggta agacttggaa aaaatcgtag CD 51 ttcagattca agtTggttca gtgagtatta ttatggtaaa tttgtgtatc CD 101 aagatgtcaa tctgagatct tatttTggtt cgatacgtcc acctacgaga CD 151 ctcaccttcg gctttcgtct cggtaggtgt attattTtac attttcctaa CD 201 aagaacattc attcatttct ttcttccccg tcgaccacga cgactgaaac CD 251 gacgtgaaaa aactagaccc ggaaaggaga agggccggtg gtggacgaca CD 301 ttcgggaaag ccgggccgat cgagtgtctt cattcaagcg acgatacaga CD 351 agaagaacga aacgaagtga gaggccgggg ggcaaggaaa agagtcgagt CD 401 cgatcaggct cgacgaccga aaaaagcaaa acgaaatccg gggttggccg CD 451 aaaaaaaaac aacgctatgg ataccatgac cgattaccct cgataaagaa CD 501 gaatctttct aaatTacttc ggatcagcgg ggccttcaag catccgaaat CD 551 acgccggggt tgtaaatgac atagcgttcc tgatagaaaa tgacgactcc CD 601 ttTaaaaaaa cgaagttatt caagttattt ttccaaaata agtcccgctc CD 651 cgacggcccg acgagttatc tacggaccct ccctgcagtg cgcccctcct CD 701 tgaatttttt ggtcatgcaa tactttttta atacaaagaa ccaaattaat CD 751 ttcgaccccg tcgtagttct caatcatttc gtggcaccgg gcgccgctga CD 801 accatctacg atggggagag cgaatgcaca gggaagaagc ttacagaaga CD 851 gaatacgttc tcgtatcgct ttttttgtag aaagctTgac cagcgagaaa CD 901 aagtgtttgg ccgaagccaa aaataggttg acccacttca ttcgcttggc CD 951 gaatgatctt cgcttcgcgg gaacaactaa aaccaccatc tcgctctttc CD 1001 cattcttcgg tgctaccttt ttctttctaa gagatggggt tggggtgtat CD 1051 aataaccttg atgctcggga acaactcctc aatcaattaa gggtcaaatg CD 1101 ttggaacctc gtgggtaagg ataagataat ggaattgata gagaaattaa CD 1151 aaaacctagg tgggatagaa gaattgataa aggtaataga tatgatgata CD 1201 gagatcatac tgagaaagag aggaattccg tacaggtaca actcttattt CD 1251 ttacgaagtc aaaaaaatgc gatctttctt gtctaataga acaaacacta CD 1301 agaccttaat tgagtcagtc aaaataaaat ctgtttatca aagTgcttct CD 1351 cTgattgctc aagacatctc ttttcaactg aagaacaaaa gaagatcatt CD 1401 tcattccatt tttgctaaaa tagtgaagga gattccaaaa ggggtggagg CD 1451 gaatccgtat atgtttttcT ggtcgattaa aagacgcagc agaaaaagct CD 1501 caaactaaat gctataagca tagaaaaact tctTgtaatg tatttaacca CD 1551 taaaatcgat tatgctcctg TggaagtatT tactcgttac ggaatctTag CD 1601 gtgtcaaagt gtggatttca tatagtcaaa aaaaagggag acgtgctata CD 1651 tccgaaacgt acgaaatata g SQ SEQUENCE 557 AA; MARKGNPISV RLGKNRSSDS SWFSEYYYGK FVYQDVNLRS YFGSIRPPTR LTFGFRLGRC IILHFPKRTF IHFFLPRRPR RLKRREKTRP GKEKGRWWTT FGKAGPIECL HSSDDTEEER NEVRGRGARK RVESIRLDDR KKQNEIRGWP KKKQRYGYHD RLPSIKKNLS KLLRISGAFK HPKYAGVVND IAFLIENDDS FKKTKLFKLF FQNKSRSDGP TSYLRTLPAV RPSLNFLVMQ YFFNTKNQIN FDPVVVLNHF VAPGAAEPST MGRANAQGRS LQKRIRSRIA FFVESLTSEK KCLAEAKNRL THFIRLANDL RFAGTTKTTI SLFPFFGATF FFLRDGVGVY NNLDAREQLL NQLRVKCWNL VGKDKIMELI EKLKNLGGIE ELIKVIDMMI EIILRKRGIP YRYNSYFYEV KKMRSFLSNR TNTKTLIESV KIKSVYQSAS LIAQDISFQL KNKRRSFHSI FAKIVKEIPK GVEGIRICFS GRLKDAAEKA QTKCYKHRKT SCNVFNHKID YAPVEVFTRY GILGVKVWIS YSQKKGRRAI SETYEI* // ID Y08501_10 STANDARD; PRT; 207 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : ccb206 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69756.3 FT PROTEIN_NAME : cytochrome c biogenesis orf206 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 30463 - 31083 FT DIRECTIONS : positive FT EDITING : 6 L(Ctt) -> F(Ttt) FT EDITING : 10 H(Cat) -> Y(Tat) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 25 F(ttC) -> F(ttT) FT EDITING : 26 L(ctC) -> L(ctT) FT EDITING : 27 S(tCg) -> L(tTg) FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 46 S(tCc) -> F(tTc) FT EDITING : 50 P(CCg) -> L(TTg) FT EDITING : 52 R(Cgg) -> W(Tgg) FT EDITING : 53 I(atC) -> I(atT) FT EDITING : 54 P(Cct) -> S(Tct) FT EDITING : 55 P(cCg) -> L(cTg) FT EDITING : 58 P(Cct) -> S(Tct) FT EDITING : 60 P(cCt) -> L(cTt) FT EDITING : 61 P(Cct) -> S(Tct) FT EDITING : 63 P(cCt) -> L(cTt) FT EDITING : 65 P(CCt) -> F(TTt) FT EDITING : 96 R(Cgg) -> W(Tgg) FT EDITING : 102 R(Cgt) -> C(Tgt) FT EDITING : 113 S(tCg) -> L(tTg) FT EDITING : 123 R(Cgg) -> W(Tgg) FT EDITING : 127 P(CCa) -> L(TTa) FT EDITING : 136 L(Ctg) -> L(Ttg) FT EDITING : 142 R(Cgt) -> C(Tgt) FT EDITING : 143 S(tCg) -> L(tTg) FT EDITING : 156 S(tCg) -> L(tTg) FT EDITING : 159 P(CCa) -> L(TTa) FT EDITING : 162 S(tCa) -> L(tTa) FT EDITING : 171 S(tCt) -> F(tTt) FT EDITING : 172 R(Cgt) -> C(Tgt) FT EDITING : 184 S(tCa) -> L(tTa) FT EDITING : 185 S(tCg) -> L(tTg) FT EDITING : 189 S(tCc) -> F(tTc) FT EDITING : 190 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 621 NT; CD 1 atgagacgac tttttCttga actatatCat aaactgatct tctcctccac CD 51 accaatcacg agtttttctt CattCctCtC gtatatcgtc gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttCat gtcattCcca tttaggtCCg CD 151 attCggatCC ctcCgttgtt tCcttttcCt CctgcacCtt ttCCtcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt acttattgct CD 251 tgccaaagat cctacttcta caattggtgg gtcacCgggt tattcaaata CD 301 agtCgtgttt tctgtggttt tcccatgtta caactttCgt accaattcgg CD 351 tcgatccgga atggatCggt taaacattCC attagggagc ctggtcttga CD 401 ctcttCtgtg tggtattcat tctCgttCgg ctcttggaat cacatccagc CD 451 agtggttgga acagctCgca aaatCCaacc acttCaccta ctttattgcc CD 501 cctaaccgtt tCtCgtacct ctattgaaac agaatggttt catgttcttt CD 551 CatCgattgg ttattCctCt ctgttcgtat ctctttttcc aatttcggtc CD 601 tcgattagtt tacaagatta a FT EDITED CDNA CD 1 atgagacgac tttttTttga actatatTat aaactgatct tctcctccac CD 51 accaatcacg agtttttctt TattTctTtT gtatatcgtc gtaacgccct CD 101 taatgctagg ttttgaaaaa gacttttTat gtcattTcca tttaggtTTg CD 151 attTggatTT ctcTgttgtt tTcttttcTt TctgcacTtt ttTTtcgaaa CD 201 tgagaaagaa gatggtacac tcgaattgta ttatttaagt acttattgct CD 251 tgccaaagat cctacttcta caattggtgg gtcacTgggt tattcaaata CD 301 agtTgtgttt tctgtggttt tcccatgtta caactttTgt accaattcgg CD 351 tcgatccgga atggatTggt taaacattTT attagggagc ctggtcttga CD 401 ctcttTtgtg tggtattcat tctTgttTgg ctcttggaat cacatccagc CD 451 agtggttgga acagctTgca aaatTTaacc acttTaccta ctttattgcc CD 501 cctaaccgtt tTtTgtacct ctattgaaac agaatggttt catgttcttt CD 551 TatTgattgg ttattTctTt ctgttcgtat ctctttttcc aatttcggtc CD 601 tcgattagtt tacaagatta a SQ SEQUENCE 207 AA; MRRLFFELYY KLIFSSTPIT SFSLFLLYIV VTPLMLGFEK DFLCHFHLGL IWISLLFSFL SALFFRNEKE DGTLELYYLS TYCLPKILLL QLVGHWVIQI SCVFCGFPML QLLYQFGRSG MDWLNILLGS LVLTLLCGIH SCLALGITSS SGWNSLQNLT TLPTLLPLTV FCTSIETEWF HVLLLIGYFF LFVSLFPISV SISLQD* // ID Y08501_15 STANDARD; PRT; 261 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : cox2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69761.3 FT PROTEIN_NAME : cytochrome c oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 234/0 FT EDITING : 8 F(ttC) -> F(ttT) FT EDITING : 9 L(CtC) -> F(TtT) FT EDITING : 24 S(tCt) -> F(tTt) FT EDITING : 46 L(ctC) -> L(ctT) FT EDITING : 85 R(Cgg) -> W(Tgg) FT EDITING : 87 I(atC) -> I(atT) FT EDITING : 93 S(tCg) -> L(tTg) FT EDITING : 127 R(Cgg) -> W(Tgg) FT EDITING : 159 S(tCa) -> L(tTa) FT EDITING : 186 P(cCt) -> L(cTt) FT EDITING : 194 S(tCa) -> L(tTa) FT EDITING : 233 T(aCg) -> M(aTg) FT EDITING : 241 P(Cct) -> S(Tct) FT EDITING : 248 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 783 NT; CD 1 atgattgttc taaaatggtt attCCtCaca atttctcctt gtgatgcagc CD 51 ggaaccatgg caattaggat Ctcaagacgc agctacacct ataatgcaag CD 101 gaataataga cttacatcac gatatctttt tcttcctCat tctgattttg CD 151 gttttcgtat tatggatctt ggttcgcgct ttatggcatt tccactataa CD 201 aaaaaatgca atcccgcaaa ggattgttca tggaactact atcgagattc CD 251 ttCggaccat Ctttcctagt atcatctCga tgttcattgc tataccatca CD 301 tttgctctct tatactcaat ggacgaggta gtagtagatc cagccattac CD 351 tatcaaagct attggacatc aatggtatCg gacttatgag tattctgact CD 401 ataacagttc cgatgagcag tcactcactt ttgacagtta tatgattcca CD 451 gaagaagatc tagaattggg tcaatCacgt ttattagaag tggacaatag CD 501 agtggttgta ccagccaaaa ctcatctacg tattattgta acatctgctg CD 551 atgtacCtca tagttgggct gtaccttcct Caggtgtcaa atgtgatgct CD 601 gtacctggtc gtttaaatca aatctctatt ttggtacaac gagaaggagt CD 651 ttactatggt cagtgcagtg agatttgtgg aactaatcat gcctttaCgt CD 701 ctatcgtcgt agaagctgtt Cctaggaaag attatggttc tCgggtatcc CD 751 aatcaattaa tcccccaaac cggggaagct taa FT EDITED CDNA CD 1 atgattgttc taaaatggtt attTTtTaca atttctcctt gtgatgcagc CD 51 ggaaccatgg caattaggat Ttcaagacgc agctacacct ataatgcaag CD 101 gaataataga cttacatcac gatatctttt tcttcctTat tctgattttg CD 151 gttttcgtat tatggatctt ggttcgcgct ttatggcatt tccactataa CD 201 aaaaaatgca atcccgcaaa ggattgttca tggaactact atcgagattc CD 251 ttTggaccat Ttttcctagt atcatctTga tgttcattgc tataccatca CD 301 tttgctctct tatactcaat ggacgaggta gtagtagatc cagccattac CD 351 tatcaaagct attggacatc aatggtatTg gacttatgag tattctgact CD 401 ataacagttc cgatgagcag tcactcactt ttgacagtta tatgattcca CD 451 gaagaagatc tagaattggg tcaatTacgt ttattagaag tggacaatag CD 501 agtggttgta ccagccaaaa ctcatctacg tattattgta acatctgctg CD 551 atgtacTtca tagttgggct gtaccttcct Taggtgtcaa atgtgatgct CD 601 gtacctggtc gtttaaatca aatctctatt ttggtacaac gagaaggagt CD 651 ttactatggt cagtgcagtg agatttgtgg aactaatcat gcctttaTgt CD 701 ctatcgtcgt agaagctgtt Tctaggaaag attatggttc tTgggtatcc CD 751 aatcaattaa tcccccaaac cggggaagct taa SQ SEQUENCE 261 AA; MIVLKWLFFT ISPCDAAEPW QLGFQDAATP IMQGIIDLHH DIFFFLILIL VFVLWILVRA LWHFHYKKNA IPQRIVHGTT IEILWTIFPS IILMFIAIPS FALLYSMDEV VVDPAITIKA IGHQWYWTYE YSDYNSSDEQ SLTFDSYMIP EEDLELGQLR LLEVDNRVVV PAKTHLRIIV TSADVLHSWA VPSLGVKCDA VPGRLNQISI LVQREGVYYG QCSEICGTNH AFMSIVVEAV SRKDYGSWVS NQLIPQTGEA * // ID Y08501_17 STANDARD; PRT; 453 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : ccb452 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69763.3 FT PROTEIN_NAME : cytochrome c biogenesis orf452 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 261/0 FT EDITING : 17 P(cCt) -> L(cTt) FT EDITING : 35 P(Ccc) -> S(Tcc) FT EDITING : 41 S(tCc) -> F(tTc) FT EDITING : 49 P(cCt) -> L(cTt) FT EDITING : 52 S(tCa) -> L(tTa) FT EDITING : 54 P(Cct) -> S(Tct) FT EDITING : 59 L(Cta) -> L(Tta) FT EDITING : 112 R(Cgt) -> C(Tgt) FT EDITING : 136 R(Cgt) -> C(Tgt) FT EDITING : 139 L(Ctc) -> F(Ttc) FT EDITING : 309 P(Ccg) -> S(Tcg) FT EDITING : 391 S(tCg) -> L(tTg) FT EDITING : 405 T(acC) -> T(acT) FT EDITING : 416 R(Cgg) -> W(Tgg) FT EDITING : 427 S(tCg) -> L(tTg) FT EDITING : 443 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1359 NT; CD 1 atggtccaac tacataactt tttctttttt attattttta tggtcgtgcC CD 51 ttgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttCccacggg tgcccctttt tCcaatggta ctataattcc tattcCtatc CD 151 tcttCattcC ctcttttggt ctatCtacat tcaaggaaaa tcatacgctc CD 201 catggacgga gcaaaaagtg gagtcttggt cagagcaagt cgccctattc CD 251 tattaccaga cataattggg agaagctcat ctgaaactag agctagaaag CD 301 gccttatttt ttttcgttcc cgttcttcat ttcCgtcttc tcgaatccaa CD 351 gggggacttc tcatatttag aatctttctg cggtgtgctc tgtttactat CD 401 tctttCgtac tttcCtcttt ttagcacgcg ataggtcagc gaagcgtgag CD 451 cgggcgcgga gaaggaaagg ccaaacactt cggccgaacg ggaatgagca CD 501 acgacgaaat gacaagatga ggtgctccgg gcacccccat ttagatttag CD 551 aaagaagggt cgaaggtttt gggcctctag ctttccccgt cccccctgag CD 601 ttgggtggtg cttgtgtggg gggcgtgcca ccagaaatcg ggcttgaagc CD 651 tctcgcctta ccaaggagcc gacagctgat ggctatggct gttggtcacg CD 701 actactacca aaaggttcca atgaagatga atatttcaca tggaggagtg CD 751 tgcatctgta tgttgggtgt tcttctgtcg aacacaaaga agatacagtt CD 801 cactcaacga ttgcctttgg gttacgaact ccatatgggg aaggaacgtt CD 851 gttgtttgcg aggtctcgat catttacatg gacccacttt tcattccatt CD 901 tgtgggaatt tgatgatcta taaaCcgtcc ctaacgaacg atcggctcat CD 951 gtttgagcat gatgaatcac ttcatgccga cctcttgcta ataaactttc CD 1001 cggcctcata taagaatgga aaacttgagc attttctgca ttggtggatg CD 1051 aagaatcgca aacataataa tttttggtta accatgttcc cagaaaaaag CD 1101 atactttcga gaaaggacga gcacggctga agtggctata catacaaatc CD 1151 tatttacgga tctatatgct tCgattggaa ctggaagttc cagaacagga CD 1201 ggttggtata ccacCataat gaaactgcct tttatttttt ttattCggat CD 1251 aggatttatg ttggcttcgt tgggaggctC gcctagtttg ttacgtcagc CD 1301 tccaaaagga taagttgcgt tggaatCgag aaagttccgt ggagttcata CD 1351 attgcataa FT EDITED CDNA CD 1 atggtccaac tacataactt tttctttttt attattttta tggtcgtgcT CD 51 ttgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttTccacggg tgcccctttt tTcaatggta ctataattcc tattcTtatc CD 151 tcttTattcT ctcttttggt ctatTtacat tcaaggaaaa tcatacgctc CD 201 catggacgga gcaaaaagtg gagtcttggt cagagcaagt cgccctattc CD 251 tattaccaga cataattggg agaagctcat ctgaaactag agctagaaag CD 301 gccttatttt ttttcgttcc cgttcttcat ttcTgtcttc tcgaatccaa CD 351 gggggacttc tcatatttag aatctttctg cggtgtgctc tgtttactat CD 401 tctttTgtac tttcTtcttt ttagcacgcg ataggtcagc gaagcgtgag CD 451 cgggcgcgga gaaggaaagg ccaaacactt cggccgaacg ggaatgagca CD 501 acgacgaaat gacaagatga ggtgctccgg gcacccccat ttagatttag CD 551 aaagaagggt cgaaggtttt gggcctctag ctttccccgt cccccctgag CD 601 ttgggtggtg cttgtgtggg gggcgtgcca ccagaaatcg ggcttgaagc CD 651 tctcgcctta ccaaggagcc gacagctgat ggctatggct gttggtcacg CD 701 actactacca aaaggttcca atgaagatga atatttcaca tggaggagtg CD 751 tgcatctgta tgttgggtgt tcttctgtcg aacacaaaga agatacagtt CD 801 cactcaacga ttgcctttgg gttacgaact ccatatgggg aaggaacgtt CD 851 gttgtttgcg aggtctcgat catttacatg gacccacttt tcattccatt CD 901 tgtgggaatt tgatgatcta taaaTcgtcc ctaacgaacg atcggctcat CD 951 gtttgagcat gatgaatcac ttcatgccga cctcttgcta ataaactttc CD 1001 cggcctcata taagaatgga aaacttgagc attttctgca ttggtggatg CD 1051 aagaatcgca aacataataa tttttggtta accatgttcc cagaaaaaag CD 1101 atactttcga gaaaggacga gcacggctga agtggctata catacaaatc CD 1151 tatttacgga tctatatgct tTgattggaa ctggaagttc cagaacagga CD 1201 ggttggtata ccacTataat gaaactgcct tttatttttt ttattTggat CD 1251 aggatttatg ttggcttcgt tgggaggctT gcctagtttg ttacgtcagc CD 1301 tccaaaagga taagttgcgt tggaatTgag aaagttccgt ggagttcata CD 1351 attgcataa SQ SEQUENCE 453 AA; MVQLHNFFFF IIFMVVLCGT AAPVLLKWFV SRDVSTGAPF FNGTIIPILI SLFSLLVYLH SRKIIRSMDG AKSGVLVRAS RPILLPDIIG RSSSETRARK ALFFFVPVLH FCLLESKGDF SYLESFCGVL CLLFFCTFFF LARDRSAKRE RARRRKGQTL RPNGNEQRRN DKMRCSGHPH LDLERRVEGF GPLAFPVPPE LGGACVGGVP PEIGLEALAL PRSRQLMAMA VGHDYYQKVP MKMNISHGGV CICMLGVLLS NTKKIQFTQR LPLGYELHMG KERCCLRGLD HLHGPTFHSI CGNLMIYKSS LTNDRLMFEH DESLHADLLL INFPASYKNG KLEHFLHWWM KNRKHNNFWL TMFPEKRYFR ERTSTAEVAI HTNLFTDLYA LIGTGSSRTG GWYTTIMKLP FIFFIWIGFM LASLGGLPSL LRQLQKDKLR WN*ESSVEFI IA* // ID Y08501_19 STANDARD; PRT; 186 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : rpl5 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69765.3 FT PROTEIN_NAME : ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 57774 - 58331 FT DIRECTIONS : positive FT EDITING : 12 S(tCa) -> L(tTa) FT EDITING : 16 P(cCg) -> L(cTg) FT EDITING : 20 P(CCg) -> L(TTg) FT EDITING : 22 H(Cac) -> Y(Tac) FT EDITING : 31 S(tCg) -> L(tTg) FT EDITING : 57 R(Cgc) -> C(Tgc) FT EDITING : 106 S(tCg) -> L(tTg) FT EDITING : 110 S(tCg) -> L(tTg) FT EDITING : 171 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 558 NT; CD 1 atgtttccac tcaattttca ttacgaagat gtatCacgtc aagatcCgtt CD 51 gctcaaaCCg aatCacgcca acgttatgga agttcctgga tCgtgtgaaa CD 101 taagagtagt accaaaggca ccctataatt tcataataaa aaatggaaaa CD 151 ttggctatgg agattccgCg cggtcagaaa ttcatacaga cacaaagggg CD 201 ttcgacagga aagtcctttc gatctaatcc attcttgggg tcaaataaag CD 251 acaaaggata tgtaagtgac ctagcacgac aaagcactct ccgagggcat CD 301 ggaatgtcta atttttCggt cagaatctCg acagtaatgt ctctattaga CD 351 ttttccggtc gaaatacgga aaaactccat tcaattctcg atggaaacgg CD 401 agttttgcga attctccccg gaactggaag atcatttcga gatcttcgaa CD 451 catattcggg ggttcaatgt gactattatc acttcggcca acacacaaga CD 501 tgagacttta cCactgtgga gcggtttttt gcaaaaagat gagggggaaa CD 551 ctcagtaa FT EDITED CDNA CD 1 atgtttccac tcaattttca ttacgaagat gtatTacgtc aagatcTgtt CD 51 gctcaaaTTg aatTacgcca acgttatgga agttcctgga tTgtgtgaaa CD 101 taagagtagt accaaaggca ccctataatt tcataataaa aaatggaaaa CD 151 ttggctatgg agattccgTg cggtcagaaa ttcatacaga cacaaagggg CD 201 ttcgacagga aagtcctttc gatctaatcc attcttgggg tcaaataaag CD 251 acaaaggata tgtaagtgac ctagcacgac aaagcactct ccgagggcat CD 301 ggaatgtcta atttttTggt cagaatctTg acagtaatgt ctctattaga CD 351 ttttccggtc gaaatacgga aaaactccat tcaattctcg atggaaacgg CD 401 agttttgcga attctccccg gaactggaag atcatttcga gatcttcgaa CD 451 catattcggg ggttcaatgt gactattatc acttcggcca acacacaaga CD 501 tgagacttta cTactgtgga gcggtttttt gcaaaaagat gagggggaaa CD 551 ctcagtaa SQ SEQUENCE 186 AA; MFPLNFHYED VLRQDLLLKL NYANVMEVPG LCEIRVVPKA PYNFIIKNGK LAMEIPCGQK FIQTQRGSTG KSFRSNPFLG SNKDKGYVSD LARQSTLRGH GMSNFLVRIL TVMSLLDFPV EIRKNSIQFS METEFCEFSP ELEDHFEIFE HIRGFNVTII TSANTQDETL LLWSGFLQKD EGETQ* // ID Y08501_20 STANDARD; PRT; 394 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : cob FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69766.3 FT PROTEIN_NAME : apocytochrome B FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 60235 - 61416 FT DIRECTIONS : positive FT EDITING : 96 L(Ctt) -> F(Ttt) FT EDITING : 109 H(Cat) -> Y(Tat) FT EDITING : 190 H(Cat) -> Y(Tat) FT EDITING : 285 H(Cat) -> Y(Tat) FT EDITING : 303 P(cCa) -> L(cTa) FT EDITING : 328 H(Cac) -> Y(Tac) FT EDITING : 362 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 1182 NT; CD 1 atgactataa ggaaccaacg attctctctt cttaaacaac ctatatcctc CD 51 cacacttaat cagcatttag tagattatcc aaccccgagc aatcttagtt CD 101 attggtgggg gttcggtccg ttagctggta tttgtttagt cattcagata CD 151 gtgactggcg tttttttagc tatgcattac acacctcatg tggatttagc CD 201 tttcaacagc gtagaacaca ttatgagaga tgttgaaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttCttat tgtggtttac CD 301 cttcatattt ttcgtggtct atatCatgcg agttatagca gtcctaggga CD 351 atttgtttgg tgtcttggag ttgtaatctt cctattaatg attgtgacag CD 401 cttttatagg atatgtacta ccttggggtc agatgagctt ttggggagct CD 451 acagtaatta caagcttagc tagcgccata cctgtagtag gagataccat CD 501 agtgacttgg ctttggggtg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tcttcatCat ttactcccct ttattttagt aggcgccagt CD 601 cttcttcatc tggccgcatt gcatcaatat ggatcaaata atccattggg CD 651 tgtacattct gagatggata aaatagcttt ttacccttat ttttatgtca CD 701 aggatctagt tggttgggta gcttttgcta tctttttttc tatttggatt CD 751 ttttatgctc ctaatgtttt gggacatccc gacaattata tacctgctaa CD 801 tccgatgtcc accccgcctc atattgtgcc ggaatggtat ttcctaccga CD 851 tcCatgccat tcttcgtagt atacctgaca aagcgggagg tgtagccgca CD 901 atagcacCag tttttatatg tctcttggct ttaccttttt ttaaaagtat CD 951 gtatgtgcgt agttcaagtt ttcgaccgat tCaccaagga atgttttggt CD 1001 tgcttttggc ggattgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaggctccat ttgttactat tggacaaatt tctCctttgg ttttcttctt CD 1101 gttctttgcc ataacgccca ttctgggacg agttggaaga ggaattccta CD 1151 attcttacac ggatgagact gatcacacct ga FT EDITED CDNA CD 1 atgactataa ggaaccaacg attctctctt cttaaacaac ctatatcctc CD 51 cacacttaat cagcatttag tagattatcc aaccccgagc aatcttagtt CD 101 attggtgggg gttcggtccg ttagctggta tttgtttagt cattcagata CD 151 gtgactggcg tttttttagc tatgcattac acacctcatg tggatttagc CD 201 tttcaacagc gtagaacaca ttatgagaga tgttgaaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttTttat tgtggtttac CD 301 cttcatattt ttcgtggtct atatTatgcg agttatagca gtcctaggga CD 351 atttgtttgg tgtcttggag ttgtaatctt cctattaatg attgtgacag CD 401 cttttatagg atatgtacta ccttggggtc agatgagctt ttggggagct CD 451 acagtaatta caagcttagc tagcgccata cctgtagtag gagataccat CD 501 agtgacttgg ctttggggtg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tcttcatTat ttactcccct ttattttagt aggcgccagt CD 601 cttcttcatc tggccgcatt gcatcaatat ggatcaaata atccattggg CD 651 tgtacattct gagatggata aaatagcttt ttacccttat ttttatgtca CD 701 aggatctagt tggttgggta gcttttgcta tctttttttc tatttggatt CD 751 ttttatgctc ctaatgtttt gggacatccc gacaattata tacctgctaa CD 801 tccgatgtcc accccgcctc atattgtgcc ggaatggtat ttcctaccga CD 851 tcTatgccat tcttcgtagt atacctgaca aagcgggagg tgtagccgca CD 901 atagcacTag tttttatatg tctcttggct ttaccttttt ttaaaagtat CD 951 gtatgtgcgt agttcaagtt ttcgaccgat tTaccaagga atgttttggt CD 1001 tgcttttggc ggattgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaggctccat ttgttactat tggacaaatt tctTctttgg ttttcttctt CD 1101 gttctttgcc ataacgccca ttctgggacg agttggaaga ggaattccta CD 1151 attcttacac ggatgagact gatcacacct ga SQ SEQUENCE 394 AA; MTIRNQRFSL LKQPISSTLN QHLVDYPTPS NLSYWWGFGP LAGICLVIQI VTGVFLAMHY TPHVDLAFNS VEHIMRDVEG GWLLRYMHAN GASMFFIVVY LHIFRGLYYA SYSSPREFVW CLGVVIFLLM IVTAFIGYVL PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNRFFSLHY LLPFILVGAS LLHLAALHQY GSNNPLGVHS EMDKIAFYPY FYVKDLVGWV AFAIFFSIWI FYAPNVLGHP DNYIPANPMS TPPHIVPEWY FLPIYAILRS IPDKAGGVAA IALVFICLLA LPFFKSMYVR SSSFRPIYQG MFWLLLADCL LLGWIGCQPV EAPFVTIGQI SSLVFFLFFA ITPILGRVGR GIPNSYTDET DHT* // ID Y08501_23 STANDARD; PRT; 206 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : nad6 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69769.3 FT PROTEIN_NAME : NADH dehydrogenase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 76642 - 77259 FT DIRECTIONS : negative FT EDITING : 9 P(cCt) -> L(cTt) FT EDITING : 18 A(gCa) -> V(gTa) FT EDITING : 30 P(CCc) -> F(TTc) FT EDITING : 32 P(cCa) -> L(cTa) FT EDITING : 35 R(Cgc) -> C(Tgc) FT EDITING : 54 P(cCa) -> L(cTa) FT EDITING : 57 H(Cat) -> Y(Tat) FT EDITING : 64 S(tCa) -> L(tTa) FT EDITING : 149 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 618 NT; CD 1 atgatacttt ctgttttgtc gagccCtgct ttggtctctg gtttgatggt CD 51 tgCacgtgct aaaaatccgg tacattccgt tttgtttCCc atccCagtct CD 101 ttCgcgacac ttcaggttta cttcttttgt taggtctcga cttcttcgct CD 151 atgatcttcc CagtagttCa tataggagct atagccgttt Cattcctttt CD 201 cgttgttatg atgttccata ttcaaatagc ggagattcac gaagaagtat CD 251 tgcgctattt accagtgagt gggattattg gactgatctt ttggtgggaa CD 301 atgtttttca ttttagataa tgaaagcatt ccattactac caacccaaag CD 351 aaatacgacc tctcttagat atacggttta tgccggaaag gtacgaagtt CD 401 ggactaattt ggaaacattg ggcaatttac tttataccta ctattCtgtc CD 451 tggtttttgg ttcctagtct tattttatta gtagccatga ttggggctat CD 501 agtactgact atgcatagga ctactaaggt gaaaagacag gatgtattcc CD 551 gacgaaatgc tattgatttt aggaggacta taatgaggag gacgactgac CD 601 ccactcacga tctactaa FT EDITED CDNA CD 1 atgatacttt ctgttttgtc gagccTtgct ttggtctctg gtttgatggt CD 51 tgTacgtgct aaaaatccgg tacattccgt tttgtttTTc atccTagtct CD 101 ttTgcgacac ttcaggttta cttcttttgt taggtctcga cttcttcgct CD 151 atgatcttcc TagtagttTa tataggagct atagccgttt Tattcctttt CD 201 cgttgttatg atgttccata ttcaaatagc ggagattcac gaagaagtat CD 251 tgcgctattt accagtgagt gggattattg gactgatctt ttggtgggaa CD 301 atgtttttca ttttagataa tgaaagcatt ccattactac caacccaaag CD 351 aaatacgacc tctcttagat atacggttta tgccggaaag gtacgaagtt CD 401 ggactaattt ggaaacattg ggcaatttac tttataccta ctattTtgtc CD 451 tggtttttgg ttcctagtct tattttatta gtagccatga ttggggctat CD 501 agtactgact atgcatagga ctactaaggt gaaaagacag gatgtattcc CD 551 gacgaaatgc tattgatttt aggaggacta taatgaggag gacgactgac CD 601 ccactcacga tctactaa SQ SEQUENCE 206 AA; MILSVLSSLA LVSGLMVVRA KNPVHSVLFF ILVFCDTSGL LLLLGLDFFA MIFLVVYIGA IAVLFLFVVM MFHIQIAEIH EEVLRYLPVS GIIGLIFWWE MFFILDNESI PLLPTQRNTT SLRYTVYAGK VRSWTNLETL GNLLYTYYFV WFLVPSLILL VAMIGAIVLT MHRTTKVKRQ DVFRRNAIDF RRTIMRRTTD PLTIY* // ID Y08501_25 STANDARD; PRT; 363 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : rps4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69772.3 FT PROTEIN_NAME : ribosomal protein S4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 82028 - 83116 FT DIRECTIONS : negative FT EDITING : 30 R(Cgg) -> W(Tgg) FT EDITING : 77 L(Ctt) -> F(Ttt) FT EDITING : 79 H(Cat) -> Y(Tat) FT EDITING : 100 P(cCa) -> L(cTa) FT EDITING : 103 P(cCa) -> L(cTa) FT EDITING : 115 H(Cat) -> Y(Tat) FT EDITING : 126 P(cCg) -> L(cTg) FT EDITING : 175 S(tCa) -> L(tTa) FT EDITING : 319 S(tCg) -> L(tTg) FT EDITING : 323 H(Cat) -> Y(Tat) FT EDITING : 331 S(tCt) -> F(tTt) FT EDITING : 348 P(CCa) -> L(TTa) FT EDITING : 351 P(cCt) -> L(cTt) FT EDITING : 353 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 1089 NT; CD 1 atgtggctgc ttaaaaaact gattcaacga gatatagatt tgtccccatt CD 51 aagatttcaa acttgtcgtc tactttcagg aaatgttCgg aacagagaac CD 101 tgacaataat acaacgccgc attctccgaa gattgaggaa caggaagaga CD 151 tctattaaga agagaaagat ttatccgaaa aaatatctta ccagttatat CD 201 acaattacaa actacacgaa agttgcccCt ttttCatggg gatttaccca CD 251 tcacagagat gcacagagga acaaaacgaa cttcatatat cccttttcCa CD 301 ctcaatcCag aaacaagatt tgacgttatt ccgcttcgtc tcCattttct CD 351 tgaaactatt cctcaagcaa ggcagcCgat aagtcatcga agggtttgtg CD 401 tgaataaagg aatggtaagc attactcatt ttaaactttc ccacggtgat CD 451 ataatatctt ttcaagaaaa taacgcgata atacgcggtg aagaaataag CD 501 gagatctttc tataaagaaa tttCagttga aaaaatcata ggcaaattac CD 551 tgcatcaacc gctaagaatg tggagaagaa gcaaaactga atggttccac CD 601 ctactcaaaa ctaagagggg atgccgccta ctactaaaat cccggttttt CD 651 gcaacagttg cgttcttcta tgcaagaaga agacttagaa agaacaaaga CD 701 agtttggatc cgaaaaagta tgcttaggaa gttccttcgc tgagcacaag CD 751 agaatgaaga ggaatttgtt aaaatcccta ttcttatcga agagaaggaa CD 801 ggataaaaac ctaaatcttc ctactcgaac aatcagtcct atagtttaca CD 851 actcttcttt atctttatat agtaattcga cctattgctt cgcatccccc CD 901 cataagttga ctatgaagag aagaatcaaa aggatcgaac tacctactca CD 951 ttattCggag gttaatCata gaacaccaaa agctgtggta tCttatggac CD 1001 ctaacatagg tcatatccct cacgacataa gattaaaaga tCCaaacctt CD 1051 cCtcttCgga gcagaaacgg acgtggccaa aacatataa FT EDITED CDNA CD 1 atgtggctgc ttaaaaaact gattcaacga gatatagatt tgtccccatt CD 51 aagatttcaa acttgtcgtc tactttcagg aaatgttTgg aacagagaac CD 101 tgacaataat acaacgccgc attctccgaa gattgaggaa caggaagaga CD 151 tctattaaga agagaaagat ttatccgaaa aaatatctta ccagttatat CD 201 acaattacaa actacacgaa agttgcccTt ttttTatggg gatttaccca CD 251 tcacagagat gcacagagga acaaaacgaa cttcatatat cccttttcTa CD 301 ctcaatcTag aaacaagatt tgacgttatt ccgcttcgtc tcTattttct CD 351 tgaaactatt cctcaagcaa ggcagcTgat aagtcatcga agggtttgtg CD 401 tgaataaagg aatggtaagc attactcatt ttaaactttc ccacggtgat CD 451 ataatatctt ttcaagaaaa taacgcgata atacgcggtg aagaaataag CD 501 gagatctttc tataaagaaa tttTagttga aaaaatcata ggcaaattac CD 551 tgcatcaacc gctaagaatg tggagaagaa gcaaaactga atggttccac CD 601 ctactcaaaa ctaagagggg atgccgccta ctactaaaat cccggttttt CD 651 gcaacagttg cgttcttcta tgcaagaaga agacttagaa agaacaaaga CD 701 agtttggatc cgaaaaagta tgcttaggaa gttccttcgc tgagcacaag CD 751 agaatgaaga ggaatttgtt aaaatcccta ttcttatcga agagaaggaa CD 801 ggataaaaac ctaaatcttc ctactcgaac aatcagtcct atagtttaca CD 851 actcttcttt atctttatat agtaattcga cctattgctt cgcatccccc CD 901 cataagttga ctatgaagag aagaatcaaa aggatcgaac tacctactca CD 951 ttattTggag gttaatTata gaacaccaaa agctgtggta tTttatggac CD 1001 ctaacatagg tcatatccct cacgacataa gattaaaaga tTTaaacctt CD 1051 cTtcttTgga gcagaaacgg acgtggccaa aacatataa SQ SEQUENCE 363 AA; MWLLKKLIQR DIDLSPLRFQ TCRLLSGNVW NRELTIIQRR ILRRLRNRKR SIKKRKIYPK KYLTSYIQLQ TTRKLPFFYG DLPITEMHRG TKRTSYIPFL LNLETRFDVI PLRLYFLETI PQARQLISHR RVCVNKGMVS ITHFKLSHGD IISFQENNAI IRGEEIRRSF YKEILVEKII GKLLHQPLRM WRRSKTEWFH LLKTKRGCRL LLKSRFLQQL RSSMQEEDLE RTKKFGSEKV CLGSSFAEHK RMKRNLLKSL FLSKRRKDKN LNLPTRTISP IVYNSSLSLY SNSTYCFASP HKLTMKRRIK RIELPTHYLE VNYRTPKAVV FYGPNIGHIP HDIRLKDLNL LLWSRNGRGQ NI* // ID Y08501_31 STANDARD; PRT; 386 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : atp6-1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69778.3 FT PROTEIN_NAME : ATPase subunit 6 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 111750 - 112907 FT DIRECTIONS : positive FT EDITING : 159 P(Cca) -> S(Tca) FT CODON_START : 1 CL CDNALEN 1158 NT; CD 1 atgcgacgaa tctttttgtt tgatgaaaat agtcttaatt caagttccac CD 51 cattgataca tcttctgctt ccaccattga tacatctttt gcgagtcaat CD 101 gcactaactt ttctagtggt caagcgtccg gtactcagga tactcatgct CD 151 ggtatttttg aggattgtcc gggccttaat cctaacgatg agcgtgtagt CD 201 agagctgcaa tgtgagatac gcgagaagtg tgaggcatta acgcaagatc CD 251 ccgaaatggg cttgattttg ggcgaagctt tacatgcgga aagcgacaat CD 301 gtcccttttt tgcagtccat tgctgatgat ttaacccaaa acggagtatc CD 351 cggggaagcc tttcaagaag ctctgaatat agtgggacag gcggcggcct CD 401 ccccactgga ccaatttgag attgtcccat tgattcctat gcatatcgga CD 451 aacttctatt tctcattcac aaatCcatct ttgttcatgc tgctaactct CD 501 gagttttttc ctacttctga ttcattttgt tactaaaaag ggaggaggaa CD 551 acttagtccc aaatgcttgg caatccttgg tagagcttct ttatgatttc CD 601 gtgctgaacc tggtaaagga acaaataggt ggtctttccg ggaatgtgaa CD 651 acaaatgttt ttcccttgca tcttggtcac ttttcttttt ttgttatttt CD 701 gtaatcttca gggtatgata ccttatagct tcacagtgac aagtcatttt CD 751 ctcattactt tggctctctc attttcgatt tttattggca ttactatagt CD 801 gggatttcaa agacatgggc ttcatttttt cagcttttta ttacccgcag CD 851 gagtcccact gccgttagca ccttttttag tactccttga gctaatttct CD 901 tattgttttc gcgcattaag cttaggaata cgtttatttg ctaatatgat CD 951 ggccggtcat agtttagtaa agattttaag tgggttcgct tggactatgc CD 1001 tatgtatgaa tgatattttc tattttatag gggctcttgg tcctttattt CD 1051 atagttcttg cattaaccgg tctggaatta ggtgtagcta tattacaagc CD 1101 ttatgttttt acgatcttaa tctgtattta cttgaatgat gctataaatc CD 1151 tccattaa FT EDITED CDNA CD 1 atgcgacgaa tctttttgtt tgatgaaaat agtcttaatt caagttccac CD 51 cattgataca tcttctgctt ccaccattga tacatctttt gcgagtcaat CD 101 gcactaactt ttctagtggt caagcgtccg gtactcagga tactcatgct CD 151 ggtatttttg aggattgtcc gggccttaat cctaacgatg agcgtgtagt CD 201 agagctgcaa tgtgagatac gcgagaagtg tgaggcatta acgcaagatc CD 251 ccgaaatggg cttgattttg ggcgaagctt tacatgcgga aagcgacaat CD 301 gtcccttttt tgcagtccat tgctgatgat ttaacccaaa acggagtatc CD 351 cggggaagcc tttcaagaag ctctgaatat agtgggacag gcggcggcct CD 401 ccccactgga ccaatttgag attgtcccat tgattcctat gcatatcgga CD 451 aacttctatt tctcattcac aaatTcatct ttgttcatgc tgctaactct CD 501 gagttttttc ctacttctga ttcattttgt tactaaaaag ggaggaggaa CD 551 acttagtccc aaatgcttgg caatccttgg tagagcttct ttatgatttc CD 601 gtgctgaacc tggtaaagga acaaataggt ggtctttccg ggaatgtgaa CD 651 acaaatgttt ttcccttgca tcttggtcac ttttcttttt ttgttatttt CD 701 gtaatcttca gggtatgata ccttatagct tcacagtgac aagtcatttt CD 751 ctcattactt tggctctctc attttcgatt tttattggca ttactatagt CD 801 gggatttcaa agacatgggc ttcatttttt cagcttttta ttacccgcag CD 851 gagtcccact gccgttagca ccttttttag tactccttga gctaatttct CD 901 tattgttttc gcgcattaag cttaggaata cgtttatttg ctaatatgat CD 951 ggccggtcat agtttagtaa agattttaag tgggttcgct tggactatgc CD 1001 tatgtatgaa tgatattttc tattttatag gggctcttgg tcctttattt CD 1051 atagttcttg cattaaccgg tctggaatta ggtgtagcta tattacaagc CD 1101 ttatgttttt acgatcttaa tctgtattta cttgaatgat gctataaatc CD 1151 tccattaa SQ SEQUENCE 386 AA; MRRIFLFDEN SLNSSSTIDT SSASTIDTSF ASQCTNFSSG QASGTQDTHA GIFEDCPGLN PNDERVVELQ CEIREKCEAL TQDPEMGLIL GEALHAESDN VPFLQSIADD LTQNGVSGEA FQEALNIVGQ AAASPLDQFE IVPLIPMHIG NFYFSFTNSS LFMLLTLSFF LLLIHFVTKK GGGNLVPNAW QSLVELLYDF VLNLVKEQIG GLSGNVKQMF FPCILVTFLF LLFCNLQGMI PYSFTVTSHF LITLALSFSI FIGITIVGFQ RHGLHFFSFL LPAGVPLPLA PFLVLLELIS YCFRALSLGI RLFANMMAGH SLVKILSGFA WTMLCMNDIF YFIGALGPLF IVLALTGLEL GVAILQAYVF TILICIYLND AINLH* // ID Y08501_39 STANDARD; PRT; 395 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : nad7 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69735.3 FT PROTEIN_NAME : NADH dehydrogenase subunit 7 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 48/2 FT INTRON 71/2 FT INTRON 227/1 FT INTRON 308/2 FT EDITING : 8 I(atC) -> I(atT) FT EDITING : 13 S(tCg) -> L(tTg) FT EDITING : 26 S(tCa) -> L(tTa) FT EDITING : 46 S(tCa) -> L(tTa) FT EDITING : 67 S(tCt) -> F(tTt) FT EDITING : 71 D(gaC) -> D(gaT) FT EDITING : 82 H(Cat) -> Y(Tat) FT EDITING : 84 S(tCa) -> L(tTa) FT EDITING : 106 R(Cgt) -> C(Tgt) FT EDITING : 112 S(tCa) -> L(tTa) FT EDITING : 115 S(tCa) -> L(tTa) FT EDITING : 193 S(tCa) -> L(tTa) FT EDITING : 233 S(tCg) -> L(tTg) FT EDITING : 242 H(Cat) -> Y(Tat) FT EDITING : 245 S(tCg) -> L(tTg) FT EDITING : 247 L(Ctt) -> F(Ttt) FT EDITING : 257 R(Cgc) -> C(Tgc) FT EDITING : 263 I(atC) -> I(atT) FT EDITING : 265 I(atC) -> I(atT) FT EDITING : 321 S(tcC) -> S(tcT) FT EDITING : 350 P(ccC) -> P(ccT) FT EDITING : 353 R(Cgt) -> C(Tgt) FT EDITING : 360 S(tCt) -> F(tTt) FT EDITING : 363 S(tCa) -> L(tTa) FT EDITING : 368 S(tCt) -> F(tTt) FT EDITING : 375 P(cCa) -> L(cTa) FT EDITING : 379 V(gtC) -> V(gtT) FT CODON_START : 1 CL CDNALEN 1185 NT; CD 1 atgacgacta ggaaaaggca aatCaaaaat tttacttCga attttggacc CD 51 tcaacatcct gctgctcatg gtgtttCacg attagtattg gaaatgaacg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggatCact ccatagaggg CD 151 actgagaaat taatagagta caaaacttat cttcaagctt taccttattC CD 201 tgatcgttca gaCtatgttt ctatgatggc ccaagaacac gctCattctt CD 251 Cagctgtaga gaaacttttg aattgcgagg taccattacg agctcaatat CD 301 atacgagtgt tattcCgtga aataactcga atttCaaatc attCacttgc CD 351 tttaactact catgctatgg atgtgggagc attaactccg ttcctgtggg CD 401 cttttgagga gcgggagaaa ttgttggaat tctatgaaag agtctcggga CD 451 gccaggatgc atgccagttt catacgacca ggtggagtgg cacaagatct CD 501 gcctcttggc ttatgtcgag atattgattc cttcacacaa caatttgctt CD 551 ctcgtatcga tgaattagaa gagatgtCaa ccggcaaccg tatctggaaa CD 601 caacgattag tggatattgg tactgtcact gcacagcaag caaaggattg CD 651 gggattcagt ggtgtaatgt taagaggtcc aggggtatgc tgggattCgc CD 701 gaagagcagc accttacgat gttCatgacc aatCggatCt tgacgtacca CD 751 gtaggtacca gaggagatCg ctatgatcgt tactgtatCc gtatCgaaga CD 801 gatgcgacaa agtcttcgga tcattgtgca atgtcttaat caaatgccta CD 851 gcggcatgat caaagccgat gatcgtaagc tatgtcctcc atcacgatgt CD 901 cgaatgaaac tatccatgga atcctcaatt caccatttcg aactttatac CD 951 agaaggtttt tcCgtaccag cttcttctac ctataccgca gttgaagcac CD 1001 ctaaaggaga atttggtgtc tttctggtca gtaatggaag caatcgtccC CD 1051 taccgtCgta aaataagagc acccggctCt gcccattCac aaggactcga CD 1101 ttCtatgtcc aaacatcaca tgcCagcaga tgtggtCacc atcataggta CD 1151 ctcaagatat tgtgtttgga gaggtggata gatag FT EDITED CDNA CD 1 atgacgacta ggaaaaggca aatTaaaaat tttacttTga attttggacc CD 51 tcaacatcct gctgctcatg gtgtttTacg attagtattg gaaatgaacg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggatTact ccatagaggg CD 151 actgagaaat taatagagta caaaacttat cttcaagctt taccttattT CD 201 tgatcgttca gaTtatgttt ctatgatggc ccaagaacac gctTattctt CD 251 Tagctgtaga gaaacttttg aattgcgagg taccattacg agctcaatat CD 301 atacgagtgt tattcTgtga aataactcga atttTaaatc attTacttgc CD 351 tttaactact catgctatgg atgtgggagc attaactccg ttcctgtggg CD 401 cttttgagga gcgggagaaa ttgttggaat tctatgaaag agtctcggga CD 451 gccaggatgc atgccagttt catacgacca ggtggagtgg cacaagatct CD 501 gcctcttggc ttatgtcgag atattgattc cttcacacaa caatttgctt CD 551 ctcgtatcga tgaattagaa gagatgtTaa ccggcaaccg tatctggaaa CD 601 caacgattag tggatattgg tactgtcact gcacagcaag caaaggattg CD 651 gggattcagt ggtgtaatgt taagaggtcc aggggtatgc tgggattTgc CD 701 gaagagcagc accttacgat gttTatgacc aatTggatTt tgacgtacca CD 751 gtaggtacca gaggagatTg ctatgatcgt tactgtatTc gtatTgaaga CD 801 gatgcgacaa agtcttcgga tcattgtgca atgtcttaat caaatgccta CD 851 gcggcatgat caaagccgat gatcgtaagc tatgtcctcc atcacgatgt CD 901 cgaatgaaac tatccatgga atcctcaatt caccatttcg aactttatac CD 951 agaaggtttt tcTgtaccag cttcttctac ctataccgca gttgaagcac CD 1001 ctaaaggaga atttggtgtc tttctggtca gtaatggaag caatcgtccT CD 1051 taccgtTgta aaataagagc acccggctTt gcccattTac aaggactcga CD 1101 ttTtatgtcc aaacatcaca tgcTagcaga tgtggtTacc atcataggta CD 1151 ctcaagatat tgtgtttgga gaggtggata gatag SQ SEQUENCE 395 AA; MTTRKRQIKN FTLNFGPQHP AAHGVLRLVL EMNGEVVERA EPHIGLLHRG TEKLIEYKTY LQALPYFDRS DYVSMMAQEH AYSLAVEKLL NCEVPLRAQY IRVLFCEITR ILNHLLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMLTGNRIWK QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDLRRAAPYD VYDQLDFDVP VGTRGDCYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC RMKLSMESSI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRCKIRAPGF AHLQGLDFMS KHHMLADVVT IIGTQDIVFG EVDR* // ID Y08501_40 STANDARD; PRT; 326 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69811.3 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : FT INTRON 130/0 FT INTRON 157/0 FT INTRON 221/0 FT INTRON 240/2 FT EDITING : 242 P(cCa) -> L(cTa) FT EDITING : 248 P(cCa) -> L(cTa) FT EDITING : 252 P(cCg) -> L(cTg) FT EDITING : 255 L(Cta) -> L(Tta) FT EDITING : 266 S(tCg) -> L(tTg) FT EDITING : 275 L(Ctc) -> F(Ttc) FT EDITING : 300 R(Cgg) -> W(Tgg) FT EDITING : 310 R(Cgg) -> W(Tgg) FT EDITING : 313 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 978 NT; CD 1 acgtacatag ctgttccagc tgaaatactt ggaataattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtag aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttcgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat tttttccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgctcgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatccga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga attattatag cgggtcggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtctctta tgaagtatct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc cccgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtctggt attcccctgt CD 551 tccctgtatt ggttatgttc cttatttctc gtctagcaga aactaatcga CD 601 gctccgtttg atctcccaga agcggaagct gaatcagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtctgctct tttttttttg ggagagtatg CD 701 ccaatatgat cttaatgagt ggtcCatgca cattgttctt tcCaggaggt CD 751 tggcCgccta tcCtagatct tcccattttc aagaagatcc cgggctCgat CD 801 ctggtttagt atcaaggttc ttCtctttct gttcctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggcCgg CD 901 aaagtgttct tgcctctatc attagctCgg gtagtcCctg tttctggtct CD 951 tttagtcacc tttcaatggc ttccttaa FT EDITED CDNA CD 1 acgtacatag ctgttccagc tgaaatactt ggaataattc taccacttct CD 51 actaggagta gcctttttag tgctagctga acgtaaagta atggcttttg CD 101 tgcaacgtag aaagggtcct gatgtagtgg gatcgttcgg attgttacaa CD 151 cctctagcag atggttcgaa attgattcta aaagaaccta tttcaccaag CD 201 tagtgctaat tttttccttt ttagaatggc tccagtggct acatttatgt CD 251 taagtctggt cgctcgggcc gttgtacctt ttgattatgg tatggtattg CD 301 tcagatccga acatagggct actttatttg tttgccatat cttcgctagg CD 351 tgtttatgga attattatag cgggtcggtc tagtaattcg aaatatgcct CD 401 ttctaggagc attacgatct gcagctcaaa tggtctctta tgaagtatct CD 451 attggtctta ttcttattac tgtactaata tgtgtaggtc cccgtaattc CD 501 gagtgagatt gtcatggcgc aaaagcagat atggtctggt attcccctgt CD 551 tccctgtatt ggttatgttc cttatttctc gtctagcaga aactaatcga CD 601 gctccgtttg atctcccaga agcggaagct gaatcagttg caggctataa CD 651 tgtagaatat tcttcaatgg ggtctgctct tttttttttg ggagagtatg CD 701 ccaatatgat cttaatgagt ggtcTatgca cattgttctt tcTaggaggt CD 751 tggcTgccta tcTtagatct tcccattttc aagaagatcc cgggctTgat CD 801 ctggtttagt atcaaggttc ttTtctttct gttcctatat atatgggtcc CD 851 gtgcagcatt tccacgatat cgttatgatc aattaatggg acttggcTgg CD 901 aaagtgttct tgcctctatc attagctTgg gtagtcTctg tttctggtct CD 951 tttagtcacc tttcaatggc ttccttaa SQ SEQUENCE 326 AA; TYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGSKLIL KEPISPSSAN FFLFRMAPVA TFMLSLVARA VVPFDYGMVL SDPNIGLLYL FAISSLGVYG IIIAGRSSNS KYAFLGALRS AAQMVSYEVS IGLILITVLI CVGPRNSSEI VMAQKQIWSG IPLFPVLVMF LISRLAETNR APFDLPEAEA ESVAGYNVEY SSMGSALFFL GEYANMILMS GLCTLFFLGG WLPILDLPIF KKIPGLIWFS IKVLFFLFLY IWVRAAFPRY RYDQLMGLGW KVFLPLSLAW VVSVSGLLVT FQWLP* // ID Y08501_41 STANDARD; PRT; 673 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT C-terminal not determined FT GENE : matR FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69736.3 FT PROTEIN_NAME : maturase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 144294 - 146312 FT DIRECTIONS : negative FT EDITING : 27 S(tCc) -> F(tTc) FT EDITING : 81 Q(Caa) -> *(Taa) FT EDITING : 95 S(tCc) -> F(tTc) FT EDITING : 125 P(cCa) -> L(cTa) FT EDITING : 577 S(tCc) -> F(tTc) FT EDITING : 584 P(cCt) -> L(cTt) FT EDITING : 591 R(Cgc) -> C(Tgc) FT EDITING : 603 H(Cac) -> Y(Tac) FT EDITING : 632 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 2019 NT; CD 1 gggttgaagt ttagaccgct cacagtagtt ctacctatag aaaagatcat CD 51 gaaagaggcg atcagaatgg tactcgaatC catttacgat cccgagtttc CD 101 cagacacatc gcatttccgc tcgggtcaag gctgccactc ggtcctaaga CD 151 cggatcaaag aagagtgggg aatctctcgc tggtttttag aattcgacat CD 201 caggaagtgt tttcacacca tcgaccgaca tcgactcatc Caaattttga CD 251 aggaagagat cgacgatccc aagttctttt actCcattca gaaagtattt CD 301 tccgccggac gactcgtagg agttgagagg ggcccttact ccgtcccaca CD 351 cagtgtacta ctatcggccc tacCaggcaa catctaccta cacaagctcg CD 401 atcaggagat agggaggatc cgacagaagt acgaaattcc gattgttcag CD 451 agagtcagat cggttctatt aaggacaggt cgtcgtattg atgaccaaga CD 501 aaaccctgga gaagaagcaa gcttcaacgc tccccaagac aacagagcca CD 551 tcattgtggg gagcgttaag agcatgcaac gcaaagcggc ctttcattcc CD 601 cttgtttcgt cgtggcacac cccccccaca agcaccctcc ggctcagggg CD 651 ggaccagaaa aggcctttcg ttttcccccc ttcgtcggcc cttgccgtct CD 701 tccttaacaa gccctcgagc cttctttgcg ccgccttcct catagaagcc CD 751 gccgggttga ccccgaaggc tgaattctat ggtggagaac gctgtaataa CD 801 taattgggcc atgagagacc ttcttaagta ttgcaaaaga aagggcctgc CD 851 tgatagagct gggcggggag gcgatactag ttatcaggtc agagagaggc CD 901 ctggcccgta agcaggcccc cttaaaaacc cattacttaa taaggatttg CD 951 ttacgcgcga tatgccgacg acttactact gggaatcgtg ggtgccgtag CD 1001 agcttctcat agaaatacaa aaacgtatcg cccatttcct acaatctggc CD 1051 ctgaaccttt gggtaggctc cgcaggatca acaacaatag ctgcacggag CD 1101 tacggtagaa ttccttggta cggtcattcg ggaagtccct ccgaggacga CD 1151 ctcccataca atttttgcga gagctggaaa agcgtctacg ggtaaagcac CD 1201 cgtatccata taactgcttg ccacctacgc tccgccatcc attcaaagtt CD 1251 taggaaccta ggtgatagta tcccgatcaa acagctgacg aaggggatga CD 1301 gcaaaacagg gagtctacag gacggggttc aactagcgga gactcttgga CD 1351 acagctggag tcagaagtcc ccaagttagc gtattatggg ggaccgtcaa CD 1401 gcacatccgg caaggatcaa gggggatctc gttcttgcat agctcaggtc CD 1451 ggagcaacgc gtcatcggac gttcaacagg tagtctcacg atcgggcact CD 1501 catgcccgta agttgtcatt gtatactccc ccgggtcgga aggcggcggg CD 1551 ggagggagga ggacactggg cgggatctat cagcagcgaa ttccccataa CD 1601 agatagaggc acctataaaa aagatactcc gaaggcttcg ggatcgaggt CD 1651 atcattagcc gaagaagacc ctggccaatc cacgtggcct gtttgacgaa CD 1701 cgtcagcgac gaagacatcg taaattggtC cgcgggcatc gcgataagtc CD 1751 Ctctgtccta ctacaggtgc Cgcgacaacc tttatcaagt ccgaacgatt CD 1801 gtcgacCacc agattcgctg gtctgcaata ttcaccctag cccacaagca CD 1851 caaatcctcg gcgccgaata taatcctcaa gtactccaaa gactCaaata CD 1901 ttgtaaatca agaaggtggc aagatccttg cagagttccc caacagcata CD 1951 gagcttggga agctcggacc cggtcaagac ctgaacaaga aggaacactc CD 2001 aactactagt ctagtctag FT EDITED CDNA CD 1 gggttgaagt ttagaccgct cacagtagtt ctacctatag aaaagatcat CD 51 gaaagaggcg atcagaatgg tactcgaatT catttacgat cccgagtttc CD 101 cagacacatc gcatttccgc tcgggtcaag gctgccactc ggtcctaaga CD 151 cggatcaaag aagagtgggg aatctctcgc tggtttttag aattcgacat CD 201 caggaagtgt tttcacacca tcgaccgaca tcgactcatc Taaattttga CD 251 aggaagagat cgacgatccc aagttctttt actTcattca gaaagtattt CD 301 tccgccggac gactcgtagg agttgagagg ggcccttact ccgtcccaca CD 351 cagtgtacta ctatcggccc tacTaggcaa catctaccta cacaagctcg CD 401 atcaggagat agggaggatc cgacagaagt acgaaattcc gattgttcag CD 451 agagtcagat cggttctatt aaggacaggt cgtcgtattg atgaccaaga CD 501 aaaccctgga gaagaagcaa gcttcaacgc tccccaagac aacagagcca CD 551 tcattgtggg gagcgttaag agcatgcaac gcaaagcggc ctttcattcc CD 601 cttgtttcgt cgtggcacac cccccccaca agcaccctcc ggctcagggg CD 651 ggaccagaaa aggcctttcg ttttcccccc ttcgtcggcc cttgccgtct CD 701 tccttaacaa gccctcgagc cttctttgcg ccgccttcct catagaagcc CD 751 gccgggttga ccccgaaggc tgaattctat ggtggagaac gctgtaataa CD 801 taattgggcc atgagagacc ttcttaagta ttgcaaaaga aagggcctgc CD 851 tgatagagct gggcggggag gcgatactag ttatcaggtc agagagaggc CD 901 ctggcccgta agcaggcccc cttaaaaacc cattacttaa taaggatttg CD 951 ttacgcgcga tatgccgacg acttactact gggaatcgtg ggtgccgtag CD 1001 agcttctcat agaaatacaa aaacgtatcg cccatttcct acaatctggc CD 1051 ctgaaccttt gggtaggctc cgcaggatca acaacaatag ctgcacggag CD 1101 tacggtagaa ttccttggta cggtcattcg ggaagtccct ccgaggacga CD 1151 ctcccataca atttttgcga gagctggaaa agcgtctacg ggtaaagcac CD 1201 cgtatccata taactgcttg ccacctacgc tccgccatcc attcaaagtt CD 1251 taggaaccta ggtgatagta tcccgatcaa acagctgacg aaggggatga CD 1301 gcaaaacagg gagtctacag gacggggttc aactagcgga gactcttgga CD 1351 acagctggag tcagaagtcc ccaagttagc gtattatggg ggaccgtcaa CD 1401 gcacatccgg caaggatcaa gggggatctc gttcttgcat agctcaggtc CD 1451 ggagcaacgc gtcatcggac gttcaacagg tagtctcacg atcgggcact CD 1501 catgcccgta agttgtcatt gtatactccc ccgggtcgga aggcggcggg CD 1551 ggagggagga ggacactggg cgggatctat cagcagcgaa ttccccataa CD 1601 agatagaggc acctataaaa aagatactcc gaaggcttcg ggatcgaggt CD 1651 atcattagcc gaagaagacc ctggccaatc cacgtggcct gtttgacgaa CD 1701 cgtcagcgac gaagacatcg taaattggtT cgcgggcatc gcgataagtc CD 1751 Ttctgtccta ctacaggtgc Tgcgacaacc tttatcaagt ccgaacgatt CD 1801 gtcgacTacc agattcgctg gtctgcaata ttcaccctag cccacaagca CD 1851 caaatcctcg gcgccgaata taatcctcaa gtactccaaa gactTaaata CD 1901 ttgtaaatca agaaggtggc aagatccttg cagagttccc caacagcata CD 1951 gagcttggga agctcggacc cggtcaagac ctgaacaaga aggaacactc CD 2001 aactactagt ctagtctag SQ SEQUENCE 673 AA; GLKFRPLTVV LPIEKIMKEA IRMVLEFIYD PEFPDTSHFR SGQGCHSVLR RIKEEWGISR WFLEFDIRKC FHTIDRHRLI *ILKEEIDDP KFFYFIQKVF SAGRLVGVER GPYSVPHSVL LSALLGNIYL HKLDQEIGRI RQKYEIPIVQ RVRSVLLRTG RRIDDQENPG EEASFNAPQD NRAIIVGSVK SMQRKAAFHS LVSSWHTPPT STLRLRGDQK RPFVFPPSSA LAVFLNKPSS LLCAAFLIEA AGLTPKAEFY GGERCNNNWA MRDLLKYCKR KGLLIELGGE AILVIRSERG LARKQAPLKT HYLIRICYAR YADDLLLGIV GAVELLIEIQ KRIAHFLQSG LNLWVGSAGS TTIAARSTVE FLGTVIREVP PRTTPIQFLR ELEKRLRVKH RIHITACHLR SAIHSKFRNL GDSIPIKQLT KGMSKTGSLQ DGVQLAETLG TAGVRSPQVS VLWGTVKHIR QGSRGISFLH SSGRSNASSD VQQVVSRSGT HARKLSLYTP PGRKAAGEGG GHWAGSISSE FPIKIEAPIK KILRRLRDRG IISRRRPWPI HVACLTNVSD EDIVNWFAGI AISLLSYYRC CDNLYQVRTI VDYQIRWSAI FTLAHKHKSS APNIILKYSK DLNIVNQEGG KILAEFPNSI ELGKLGPGQD LNKKEHSTTS LV* // ID Y08501_45 STANDARD; PRT; 350 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : rpl2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69740.1 FT PROTEIN_NAME : ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 306/2 FT EDITING : 237 I(atC) -> I(atT) FT CODON_START : 1 CL CDNALEN 1050 NT; CD 1 atgagaccag ggagagcaag agcacttaga caattcactt tgagtacagg CD 51 aaagtctgct ggtaggaatt cctcagggcg tattacggtt tttcaccgag CD 101 ggggtggctc gaagcgattg ctgcgaagaa ttgatctgaa acgaagcact CD 151 tcctctatgg gcattgtaga gagtatagaa tatgacccta atcgttcttc CD 201 tcagatcgct ccagtacgat ggatcaaagg gggctgccag aaaaaaatga CD 251 acacgatcga gaagttcgct ccgccgcgca agatcctcga acctaccacg CD 301 aacaccatca gcggcctctt ttcgttctct ttcctgcccg ggaaggtgga CD 351 taaaagaaag gtagcttgct tctctcctgg actgatggcc gcttatgtag CD 401 tggtcggcct tcctaccgga atgcctcctt tgtcttcgtc taagagcgcc CD 451 tttgctagta agggcgcagg aagcacaaaa actttagtga aggacgtctt CD 501 cttctctgcc ttctcctctc caaaggccaa gagagagact gcatcccttg CD 551 ccttcgctag ctcttttggt ttcccaagga tagcggtagc tggggcaaag CD 601 cccgctttct tcgctccgcg aatgagacag aaagtgagag gaaaaagcac CD 651 gttctctctt tgcgaggtcc aaaaggggag aacgcatagc attctctggg CD 701 cacataggat Caaaggtaaa gcagggcttt cttggcagag ttttaggcgg CD 751 caagatactt tagggcttgt tggagctgct gggcataaaa aatcgaagcc CD 801 gaagacggat caaggtaact tgcctgccaa gccaataggc gaaagggcga CD 851 agcaactcaa agctctccgg ggtttgaggg cgaaggatgg agcgtgcaaa CD 901 gtcgatcgtg cacctgtcac ttatataata gccagtcatc aattagaagc CD 951 aggcaaaatg gtgatgaatt gcgattggtc caaaccttcg accagctcct CD 1001 tcttgcaatc cgcccagaat gaccatccta agcccttatt cactgtgtga FT EDITED CDNA CD 1 atgagaccag ggagagcaag agcacttaga caattcactt tgagtacagg CD 51 aaagtctgct ggtaggaatt cctcagggcg tattacggtt tttcaccgag CD 101 ggggtggctc gaagcgattg ctgcgaagaa ttgatctgaa acgaagcact CD 151 tcctctatgg gcattgtaga gagtatagaa tatgacccta atcgttcttc CD 201 tcagatcgct ccagtacgat ggatcaaagg gggctgccag aaaaaaatga CD 251 acacgatcga gaagttcgct ccgccgcgca agatcctcga acctaccacg CD 301 aacaccatca gcggcctctt ttcgttctct ttcctgcccg ggaaggtgga CD 351 taaaagaaag gtagcttgct tctctcctgg actgatggcc gcttatgtag CD 401 tggtcggcct tcctaccgga atgcctcctt tgtcttcgtc taagagcgcc CD 451 tttgctagta agggcgcagg aagcacaaaa actttagtga aggacgtctt CD 501 cttctctgcc ttctcctctc caaaggccaa gagagagact gcatcccttg CD 551 ccttcgctag ctcttttggt ttcccaagga tagcggtagc tggggcaaag CD 601 cccgctttct tcgctccgcg aatgagacag aaagtgagag gaaaaagcac CD 651 gttctctctt tgcgaggtcc aaaaggggag aacgcatagc attctctggg CD 701 cacataggat Taaaggtaaa gcagggcttt cttggcagag ttttaggcgg CD 751 caagatactt tagggcttgt tggagctgct gggcataaaa aatcgaagcc CD 801 gaagacggat caaggtaact tgcctgccaa gccaataggc gaaagggcga CD 851 agcaactcaa agctctccgg ggtttgaggg cgaaggatgg agcgtgcaaa CD 901 gtcgatcgtg cacctgtcac ttatataata gccagtcatc aattagaagc CD 951 aggcaaaatg gtgatgaatt gcgattggtc caaaccttcg accagctcct CD 1001 tcttgcaatc cgcccagaat gaccatccta agcccttatt cactgtgtga SQ SEQUENCE 350 AA; MRPGRARALR QFTLSTGKSA GRNSSGRITV FHRGGGSKRL LRRIDLKRST SSMGIVESIE YDPNRSSQIA PVRWIKGGCQ KKMNTIEKFA PPRKILEPTT NTISGLFSFS FLPGKVDKRK VACFSPGLMA AYVVVGLPTG MPPLSSSKSA FASKGAGSTK TLVKDVFFSA FSSPKAKRET ASLAFASSFG FPRIAVAGAK PAFFAPRMRQ KVRGKSTFSL CEVQKGRTHS ILWAHRIKGK AGLSWQSFRR QDTLGLVGAA GHKKSKPKTD QGNLPAKPIG ERAKQLKALR GLRAKDGACK VDRAPVTYII ASHQLEAGKM VMNCDWSKPS TSSFLQSAQN DHPKPLFTV* // ID Y08501_46 STANDARD; PRT; 287 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT N-terminal not determined FT GENE : orfX FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69741.3 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 157491 - 158351 FT DIRECTIONS : positive FT EDITING : 20 S(tCg) -> L(tTg) FT EDITING : 48 F(ttC) -> F(ttT) FT EDITING : 49 P(Ccg) -> S(Tcg) FT EDITING : 54 S(tCt) -> F(tTt) FT EDITING : 55 P(cCa) -> L(cTa) FT EDITING : 58 S(tCa) -> L(tTa) FT EDITING : 67 S(tCg) -> L(tTg) FT EDITING : 121 L(Ctc) -> F(Ttc) FT EDITING : 122 H(Cat) -> Y(Tat) FT EDITING : 126 S(tCt) -> F(tTt) FT EDITING : 127 R(Cgc) -> C(Tgc) FT EDITING : 136 P(cCt) -> L(cTt) FT EDITING : 137 P(Ccc) -> S(Tcc) FT EDITING : 138 R(Cgg) -> W(Tgg) FT EDITING : 147 P(cCa) -> L(cTa) FT EDITING : 158 L(ctC) -> L(ctT) FT EDITING : 169 H(Cat) -> Y(Tat) FT EDITING : 180 P(Cca) -> S(Tca) FT EDITING : 194 P(cCa) -> L(cTa) FT EDITING : 215 P(Ccg) -> S(Tcg) FT EDITING : 222 S(tCc) -> F(tTc) FT EDITING : 231 I(atC) -> I(atT) FT EDITING : 234 R(Cgt) -> C(Tgt) FT EDITING : 249 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 861 NT; CD 1 aatccttcac ttttagcttt gaattactta tatatatcct atgaatttaa CD 51 tttcgcatCg gaaacgattc taggagaagt tcgaatccgt tccgttcgga CD 101 tattgatcgg tcttggtttg acatggttta cgtgttactg gttCCcggaa CD 151 gagttaatat CtcCattagc gtCacccttt cttaccctgc cttttgactC CD 201 gtattttgtt tgtacacaat taacggaggc cttttcgaca tttgttgcaa CD 251 cgtcttcaat agcatgctct tatttcgtct ttcctttaat aagttatcaa CD 301 atttggtgct ttttgatccc cagttgctat ggagaacaaa ggacgaaata CD 351 caatcgattc CtcCatttaa gtggttCtCg cttcttcttg ttcctgttcc CD 401 taactcCtCc cCgggtcgtt cccaatgttt ggcactttcC atacttcgtg CD 451 ggtgcaacat caacaaattc gctCatgatc aagttacaac ctaagatcta CD 501 tgacCatatt atgttaactg ttcgtatttc gttcattCca tcggtatgct CD 551 cccaggtacc tgtaattgtg atctgtttgc Cagaaccaag gggtctttct CD 601 ttggaaacct tcacgaacaa tcgtcgtttt ttgatggttt ttCcgcttct CD 651 cacagctgct ctttCcacac ctccggatat ctggtgccaa atCgtcgccC CD 701 gtttccttat ttctttgata atagagttgg ctatttttgt ggcatCgatt CD 751 gtacaagttc gtgaagaggg ctggacgagt ggaatgaggg agagcggctc CD 801 gatcgagaaa aaaaataaga gtagcccccc ccctagaacc tggcaaagta CD 851 actatcaatg a FT EDITED CDNA CD 1 aatccttcac ttttagcttt gaattactta tatatatcct atgaatttaa CD 51 tttcgcatTg gaaacgattc taggagaagt tcgaatccgt tccgttcgga CD 101 tattgatcgg tcttggtttg acatggttta cgtgttactg gttTTcggaa CD 151 gagttaatat TtcTattagc gtTacccttt cttaccctgc cttttgactT CD 201 gtattttgtt tgtacacaat taacggaggc cttttcgaca tttgttgcaa CD 251 cgtcttcaat agcatgctct tatttcgtct ttcctttaat aagttatcaa CD 301 atttggtgct ttttgatccc cagttgctat ggagaacaaa ggacgaaata CD 351 caatcgattc TtcTatttaa gtggttTtTg cttcttcttg ttcctgttcc CD 401 taactcTtTc cTgggtcgtt cccaatgttt ggcactttcT atacttcgtg CD 451 ggtgcaacat caacaaattc gctTatgatc aagttacaac ctaagatcta CD 501 tgacTatatt atgttaactg ttcgtatttc gttcattTca tcggtatgct CD 551 cccaggtacc tgtaattgtg atctgtttgc Tagaaccaag gggtctttct CD 601 ttggaaacct tcacgaacaa tcgtcgtttt ttgatggttt ttTcgcttct CD 651 cacagctgct ctttTcacac ctccggatat ctggtgccaa atTgtcgccT CD 701 gtttccttat ttctttgata atagagttgg ctatttttgt ggcatTgatt CD 751 gtacaagttc gtgaagaggg ctggacgagt ggaatgaggg agagcggctc CD 801 gatcgagaaa aaaaataaga gtagcccccc ccctagaacc tggcaaagta CD 851 actatcaatg a SQ SEQUENCE 287 AA; NPSLLALNYL YISYEFNFAL ETILGEVRIR SVRILIGLGL TWFTCYWFSE ELIFLLALPF LTLPFDLYFV CTQLTEAFST FVATSSIACS YFVFPLISYQ IWCFLIPSCY GEQRTKYNRF FYLSGFCFFL FLFLTLSWVV PNVWHFLYFV GATSTNSLMI KLQPKIYDYI MLTVRISFIS SVCSQVPVIV ICLLEPRGLS LETFTNNRRF LMVFSLLTAA LFTPPDIWCQ IVACFLISLI IELAIFVALI VQVREEGWTS GMRESGSIEK KNKSSPPPRT WQSNYQ* // ID Y08501_47 STANDARD; PRT; 496 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : nad4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69742.3 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 154/2 FT INTRON 326/1 FT INTRON 467/0 FT EDITING : 10 S(tCt) -> F(tTt) FT EDITING : 25 T(aCt) -> I(aTt) FT EDITING : 28 F(ttC) -> F(ttT) FT EDITING : 36 P(cCg) -> L(cTg) FT EDITING : 42 L(Ctg) -> L(Ttg) FT EDITING : 53 P(cCt) -> L(cTt) FT EDITING : 55 P(cCt) -> L(cTt) FT EDITING : 56 R(Cgg) -> W(Tgg) FT EDITING : 66 S(tCt) -> F(tTt) FT EDITING : 106 S(tCa) -> L(tTa) FT EDITING : 121 T(aCa) -> I(aTa) FT EDITING : 126 R(Cgt) -> C(Tgt) FT EDITING : 134 F(ttC) -> F(ttT) FT EDITING : 135 R(Cgc) -> C(Tgc) FT EDITING : 140 L(Cta) -> L(Tta) FT EDITING : 150 P(cCa) -> L(cTa) FT EDITING : 203 S(tCa) -> L(tTa) FT EDITING : 220 S(tCt) -> F(tTt) FT EDITING : 256 P(cCt) -> L(cTt) FT EDITING : 262 H(Cac) -> Y(Tac) FT EDITING : 279 S(tCt) -> F(tTt) FT EDITING : 299 S(tCa) -> L(tTa) FT EDITING : 337 P(cCg) -> L(cTg) FT EDITING : 345 P(Cct) -> S(Tct) FT EDITING : 367 Y(taC) -> Y(taT) FT EDITING : 377 L(Ctc) -> F(Ttc) FT EDITING : 391 S(tCa) -> L(tTa) FT EDITING : 452 S(tCa) -> L(tTa) FT EDITING : 458 S(tCc) -> F(tTc) FT EDITING : 469 R(Cgg) -> W(Tgg) FT EDITING : 473 H(Cac) -> Y(Tac) FT EDITING : 478 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 1488 NT; CD 1 atgttagaac atttctgtga atgctattCt aatctaagtg gtcttattct CD 51 gtgtcctgtg ctaggaagca ttaCtcttct tttCattcca aattcaagaa CD 101 tacgacCgat acgattaatt ggtCtgtgtg cctctcttat tacttttttg CD 151 tattctcCtg ttcCtCggat acaattcgac tcttctacgg ccaaatCtca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc aatttttatt CD 251 tgggtataga cggtatctct ttattcttcg tgatattgac cacatttctg CD 301 atccctattt gcatttCagt gggttggtct ggtatgagaa gttatgggaa CD 351 agagtatatt aCagcatttt taattCgtga atttctaatg atcgccgtgt CD 401 tCCgcatgct agatcttCta ctattctatg tttttcccga aagcgtgcCa CD 451 atccctatgt tcattattat aggagtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctttatac tttacttgga tctcttttta CD 551 tgctattagc tattctgttg attcttttcc aaacaggaac caccgattta CD 601 caaatatCat taaccacaga atttagtgag cggcgccaaa tctttctatg CD 651 gattgcttCt ttcgcctctt tcgccgtcaa agtgcctatg gtaccagttc CD 701 atatttggtt acctgaagct catgtagagg cacctacggc aggatccgtc CD 751 atcttggcag gaattcCttt aaaatttgga accCacgggt ttttaagatt CD 801 ttcaataccc atgtttcccg aagcgacact ttgttCtact cctttcattt CD 851 atactttaag cgcgattgct ataatatata cttccttgac cacttCaaga CD 901 cagatcgatc taaagaagat cattgcttac tcctcagtag cccatatgaa CD 951 tctggtgact attggtatgt ttagtccgaa catacaggga attggaggta CD 1001 gcattctacC gatgttaagt catggactgg ttCcttcagc cctttttcta CD 1051 tgtgttggtg ttttatatga ccgacataag actcgacttg ttagatatta CD 1101 Cggaggttta gtgagcacca tgccgaatCt ctctaccatt ttcttttctt CD 1151 ttactttggc caatatgagt tCacctggta ctagcagctt tatcggggaa CD 1201 tttctcatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 agcagcgctt gggatgattt taggtgcggc ctattccctt tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacctg atttcctcca taaattctcc CD 1351 gattCaaatg gcagagaagt ttCcatattt ataccttttc ttgttggact CD 1401 cgttCggatg ggtgttCacc ccaaagtgtt ccCggactgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggcaaat ttcattga FT EDITED CDNA CD 1 atgttagaac atttctgtga atgctattTt aatctaagtg gtcttattct CD 51 gtgtcctgtg ctaggaagca ttaTtcttct tttTattcca aattcaagaa CD 101 tacgacTgat acgattaatt ggtTtgtgtg cctctcttat tacttttttg CD 151 tattctcTtg ttcTtTggat acaattcgac tcttctacgg ccaaatTtca CD 201 atttgtggaa agccttcgat ggcttcctta tgaaaacatc aatttttatt CD 251 tgggtataga cggtatctct ttattcttcg tgatattgac cacatttctg CD 301 atccctattt gcatttTagt gggttggtct ggtatgagaa gttatgggaa CD 351 agagtatatt aTagcatttt taattTgtga atttctaatg atcgccgtgt CD 401 tTTgcatgct agatcttTta ctattctatg tttttcccga aagcgtgcTa CD 451 atccctatgt tcattattat aggagtatgg ggttcgagac aaagaaagat CD 501 caaggcagca tatcagtttt tcctttatac tttacttgga tctcttttta CD 551 tgctattagc tattctgttg attcttttcc aaacaggaac caccgattta CD 601 caaatatTat taaccacaga atttagtgag cggcgccaaa tctttctatg CD 651 gattgcttTt ttcgcctctt tcgccgtcaa agtgcctatg gtaccagttc CD 701 atatttggtt acctgaagct catgtagagg cacctacggc aggatccgtc CD 751 atcttggcag gaattcTttt aaaatttgga accTacgggt ttttaagatt CD 801 ttcaataccc atgtttcccg aagcgacact ttgttTtact cctttcattt CD 851 atactttaag cgcgattgct ataatatata cttccttgac cacttTaaga CD 901 cagatcgatc taaagaagat cattgcttac tcctcagtag cccatatgaa CD 951 tctggtgact attggtatgt ttagtccgaa catacaggga attggaggta CD 1001 gcattctacT gatgttaagt catggactgg ttTcttcagc cctttttcta CD 1051 tgtgttggtg ttttatatga ccgacataag actcgacttg ttagatatta CD 1101 Tggaggttta gtgagcacca tgccgaatTt ctctaccatt ttcttttctt CD 1151 ttactttggc caatatgagt tTacctggta ctagcagctt tatcggggaa CD 1201 tttctcatct tagtaggagc tttccaaaga aatagcttag tagccacatt CD 1251 agcagcgctt gggatgattt taggtgcggc ctattccctt tggctatata CD 1301 atcgtgtggt ttctggaaat ttaaaacctg atttcctcca taaattctcc CD 1351 gattTaaatg gcagagaagt ttTcatattt ataccttttc ttgttggact CD 1401 cgttTggatg ggtgttTacc ccaaagtgtt ccTggactgc atgcatacat CD 1451 ccgtaagtaa cttagtgcaa catggcaaat ttcattga SQ SEQUENCE 496 AA; MLEHFCECYF NLSGLILCPV LGSIILLFIP NSRIRLIRLI GLCASLITFL YSLVLWIQFD SSTAKFQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL IPICILVGWS GMRSYGKEYI IAFLICEFLM IAVFCMLDLL LFYVFPESVL IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL QILLTTEFSE RRQIFLWIAF FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGILLKFG TYGFLRFSIP MFPEATLCFT PFIYTLSAIA IIYTSLTTLR QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILLMLS HGLVSSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNFSTI FFSFTLANMS LPGTSSFIGE FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DLNGREVFIF IPFLVGLVWM GVYPKVFLDC MHTSVSNLVQ HGKFH* // ID Y08501_53 STANDARD; PRT; 193 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : orf25 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69748.3 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 188084 - 188662 FT DIRECTIONS : negative FT EDITING : 30 S(tCa) -> L(tTa) FT EDITING : 46 I(atC) -> I(atT) FT EDITING : 72 S(tCg) -> L(tTg) FT EDITING : 83 P(cCt) -> L(cTt) FT EDITING : 84 P(CCg) -> L(TTg) FT EDITING : 132 S(tCa) -> L(tTa) FT EDITING : 139 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 579 NT; CD 1 atgagattga gtattacgaa tatggatggt agaaagatgt tatttgctgc CD 51 tattctatct atttgtgcat taagttcgaa gaagatctCa atctataatg CD 101 aagaaatgat agtagctctt tgttttatag gctttatCat attcagtcgt CD 151 aagagtttag gtacgacttt caaagtgact ctcgacggga gcctccaggc CD 201 tattcaggaa gaatCgcagc aattccccaa tcctaacgaa gtagttcCtC CD 251 Cggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgt CD 301 ggcaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgtt aagtCagcaa CD 401 cacttacaaa tgccaCttct tcccgtcgca tccgttttca ggacgatcta CD 451 gtcacaaagt tttacacctt agtggggaag caatttgcct actcttgtat CD 501 ctcgaaagca gaaagagtag aattcattcg agagagcttg gtggtcttaa CD 551 gaatggttcg ggggggggtt ttctcttaa FT EDITED CDNA CD 1 atgagattga gtattacgaa tatggatggt agaaagatgt tatttgctgc CD 51 tattctatct atttgtgcat taagttcgaa gaagatctTa atctataatg CD 101 aagaaatgat agtagctctt tgttttatag gctttatTat attcagtcgt CD 151 aagagtttag gtacgacttt caaagtgact ctcgacggga gcctccaggc CD 201 tattcaggaa gaatTgcagc aattccccaa tcctaacgaa gtagttcTtT CD 251 Tggaatccaa tgaacaacaa cgattactta ggatcagctt gcgaatttgt CD 301 ggcaccgtag tagaatcatt accaatggca cgctgtgcgc ctaagtgcga CD 351 aaagacagtg caagctttgt tatgccgaaa cctaaatgtt aagtTagcaa CD 401 cacttacaaa tgccaTttct tcccgtcgca tccgttttca ggacgatcta CD 451 gtcacaaagt tttacacctt agtggggaag caatttgcct actcttgtat CD 501 ctcgaaagca gaaagagtag aattcattcg agagagcttg gtggtcttaa CD 551 gaatggttcg ggggggggtt ttctcttaa SQ SEQUENCE 193 AA; MRLSITNMDG RKMLFAAILS ICALSSKKIL IYNEEMIVAL CFIGFIIFSR KSLGTTFKVT LDGSLQAIQE ELQQFPNPNE VVLLESNEQQ RLLRISLRIC GTVVESLPMA RCAPKCEKTV QALLCRNLNV KLATLTNAIS SRRIRFQDDL VTKFYTLVGK QFAYSCISKA ERVEFIRESL VVLRMVRGGV FS* // ID Y08501_54 STANDARD; PRT; 101 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : nad4L FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69749.3 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 188929 - 189231 FT DIRECTIONS : negative FT EDITING : 14 S(tCt) -> F(tTt) FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 29 P(cCt) -> L(cTt) FT EDITING : 32 S(tCa) -> L(tTa) FT EDITING : 34 P(Cca) -> S(Tca) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 53 S(tCg) -> L(tTg) FT EDITING : 63 S(tCa) -> L(tTa) FT EDITING : 66 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atggatctta tcaaatattt cacattttct atgattattt Ctattttagg CD 51 tattCgggga atcctcctta atagacgaaa tattcCtatt atgtCaatgC CD 101 caattgaatC aatgttatta gctgtgaatt cgaacttttt ggtattttcc CD 151 gtttcttCgg atgatatgat gggtcaagta tttgcttCat tggttcCaac CD 201 ggtggcagct gcggaatccg ctattgggtt agccattttc gttataactt CD 251 tccgagtccg aggtactatt gctgtagaat ttattaatag cattcaaggt CD 301 taa FT EDITED CDNA CD 1 atggatctta tcaaatattt cacattttct atgattattt Ttattttagg CD 51 tattTgggga atcctcctta atagacgaaa tattcTtatt atgtTaatgT CD 101 caattgaatT aatgttatta gctgtgaatt cgaacttttt ggtattttcc CD 151 gtttcttTgg atgatatgat gggtcaagta tttgcttTat tggttcTaac CD 201 ggtggcagct gcggaatccg ctattgggtt agccattttc gttataactt CD 251 tccgagtccg aggtactatt gctgtagaat ttattaatag cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDLIKYFTFS MIIFILGIWG ILLNRRNILI MLMSIELMLL AVNSNFLVFS VSLDDMMGQV FALLVLTVAA AESAIGLAIF VITFRVRGTI AVEFINSIQG * // ID Y08501_58 STANDARD; PRT; 241 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : nad1 FT NOTE : unnamed protein product; orf240a FT LOCUS_TAG : FT PROTEIN_ID : CAA69844.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 203588 - 204310 FT DIRECTIONS : negative FT EDITING : 67 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 723 NT; CD 1 atgcgtagta gcgttctaag atcactgagg ggaaggttgg tcataaattt CD 51 ggagagtaca cggaaactca gactttcgag aacaaatatt gtaccgggaa CD 101 gaaaaaaggg acagaaatcc ataaagtcaa aaaatatggc acgaaaagga CD 151 aatccgattt tggtaagact tggaaaaaat cgtagttcag attcaagtCg CD 201 gttcagtgcc gaggcactgt tagggtgttt atactttttt atatatttcg CD 251 tagccccaac attggggcct gttctgtttc tactgcgatt aatacatttt CD 301 gtttgggggc tgaggttggg attgggaaat gagaactttc attttggcgt CD 351 tgggcctgat ggcggcgcga ctggtctcga tctcaaccag ccgccccaag CD 401 agcagcagcc caccctagga gtcaatcgtg ctgctctcga tctcaacgag CD 451 cttcctccag tacatttatt gtacgcagag gtcgagggcc cccagtctac CD 501 gaaggcgcaa aatgacgtaa tgttagctca tctaaatcaa gtacaaaact CD 551 taactaggga cctccagact gagcctaata tctggcgtcg tcaggcgttg CD 601 atagatatac tggactggga ggtcagaagc ctccagcgcc attttcgtat CD 651 ctttcgccag cgagatcgac tcagggaggt ccaaaggtcc tggttgcgcg CD 701 agcagctaaa tcgttatcga taa FT EDITED CDNA CD 1 atgcgtagta gcgttctaag atcactgagg ggaaggttgg tcataaattt CD 51 ggagagtaca cggaaactca gactttcgag aacaaatatt gtaccgggaa CD 101 gaaaaaaggg acagaaatcc ataaagtcaa aaaatatggc acgaaaagga CD 151 aatccgattt tggtaagact tggaaaaaat cgtagttcag attcaagtTg CD 201 gttcagtgcc gaggcactgt tagggtgttt atactttttt atatatttcg CD 251 tagccccaac attggggcct gttctgtttc tactgcgatt aatacatttt CD 301 gtttgggggc tgaggttggg attgggaaat gagaactttc attttggcgt CD 351 tgggcctgat ggcggcgcga ctggtctcga tctcaaccag ccgccccaag CD 401 agcagcagcc caccctagga gtcaatcgtg ctgctctcga tctcaacgag CD 451 cttcctccag tacatttatt gtacgcagag gtcgagggcc cccagtctac CD 501 gaaggcgcaa aatgacgtaa tgttagctca tctaaatcaa gtacaaaact CD 551 taactaggga cctccagact gagcctaata tctggcgtcg tcaggcgttg CD 601 atagatatac tggactggga ggtcagaagc ctccagcgcc attttcgtat CD 651 ctttcgccag cgagatcgac tcagggaggt ccaaaggtcc tggttgcgcg CD 701 agcagctaaa tcgttatcga taa SQ SEQUENCE 241 AA; MRSSVLRSLR GRLVINLEST RKLRLSRTNI VPGRKKGQKS IKSKNMARKG NPILVRLGKN RSSDSSWFSA EALLGCLYFF IYFVAPTLGP VLFLLRLIHF VWGLRLGLGN ENFHFGVGPD GGATGLDLNQ PPQEQQPTLG VNRAALDLNE LPPVHLLYAE VEGPQSTKAQ NDVMLAHLNQ VQNLTRDLQT EPNIWRRQAL IDILDWEVRS LQRHFRIFRQ RDRLREVQRS WLREQLNRYR * // ID Y08501_61 STANDARD; PRT; 266 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : cox3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69818.3 FT PROTEIN_NAME : cytochrome c oxidase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 218280 - 219077 FT DIRECTIONS : positive FT EDITING : 38 P(Cca) -> S(Tca) FT EDITING : 82 P(cCt) -> L(cTt) FT EDITING : 86 S(tCt) -> F(tTt) FT EDITING : 104 S(tCt) -> F(tTt) FT EDITING : 105 S(tCt) -> F(tTt) FT EDITING : 138 P(cCt) -> L(cTt) FT EDITING : 141 P(cCt) -> L(cTt) FT EDITING : 201 F(ttC) -> F(ttT) FT CODON_START : 1 CL CDNALEN 798 NT; CD 1 atgattgaat ctcagaggca ttcttatcat ttggtagatc caagtccatg CD 51 gcctatttcg ggttcactcg gagctttggc aaccaccgta ggaggtgtga CD 101 tgtacatgca cCcatttcaa gggggtgcaa gacttctaag tttgggcctc CD 151 atatttatcc tatataccat gttcgtatgg tggcgcgatg ttctacgtga CD 201 atccacgttg gaaggacatc ataccaaagt cgtacaatta ggacCtcgat CD 251 atggttCtat tctgttcatc gtatcggagg ttatgttctt ttttgctttt CD 301 ttttgggctt CttCtcattc ttctttggca cctgcggtag agatcggagg CD 351 tatttggccc ccaaaaggga ttgaggtttt agatccttgg gaaatccctt CD 401 ttcttaatac ccCtattctc cCttcatccg gagctgccgt aacttgggct CD 451 catcatgcta tactcgcggg gaaagaaaaa cgagcagttt atgctttagt CD 501 agctaccgtt ttattggctc tagtatttac tggctttcaa ggaatggaat CD 551 attatcaagc acccttcact atttcggata gtatttatgg ttctaccttt CD 601 ttCttagcaa caggctttca tggttttcat gtgattatag gtactctttt CD 651 cttgattata tgtggtattc ggcaatatct tggtcatctg acgaaggagc CD 701 atcacgttgg ctttgaagca gctgcatggt actggcattt tgtagacgta CD 751 gtttggttat tcctatttgt ctctatctat tggtggggag gtatatga FT EDITED CDNA CD 1 atgattgaat ctcagaggca ttcttatcat ttggtagatc caagtccatg CD 51 gcctatttcg ggttcactcg gagctttggc aaccaccgta ggaggtgtga CD 101 tgtacatgca cTcatttcaa gggggtgcaa gacttctaag tttgggcctc CD 151 atatttatcc tatataccat gttcgtatgg tggcgcgatg ttctacgtga CD 201 atccacgttg gaaggacatc ataccaaagt cgtacaatta ggacTtcgat CD 251 atggttTtat tctgttcatc gtatcggagg ttatgttctt ttttgctttt CD 301 ttttgggctt TttTtcattc ttctttggca cctgcggtag agatcggagg CD 351 tatttggccc ccaaaaggga ttgaggtttt agatccttgg gaaatccctt CD 401 ttcttaatac ccTtattctc cTttcatccg gagctgccgt aacttgggct CD 451 catcatgcta tactcgcggg gaaagaaaaa cgagcagttt atgctttagt CD 501 agctaccgtt ttattggctc tagtatttac tggctttcaa ggaatggaat CD 551 attatcaagc acccttcact atttcggata gtatttatgg ttctaccttt CD 601 ttTttagcaa caggctttca tggttttcat gtgattatag gtactctttt CD 651 cttgattata tgtggtattc ggcaatatct tggtcatctg acgaaggagc CD 701 atcacgttgg ctttgaagca gctgcatggt actggcattt tgtagacgta CD 751 gtttggttat tcctatttgt ctctatctat tggtggggag gtatatga SQ SEQUENCE 266 AA; MIESQRHSYH LVDPSPWPIS GSLGALATTV GGVMYMHSFQ GGARLLSLGL IFILYTMFVW WRDVLRESTL EGHHTKVVQL GLRYGFILFI VSEVMFFFAF FWAFFHSSLA PAVEIGGIWP PKGIEVLDPW EIPFLNTLIL LSSGAAVTWA HHAILAGKEK RAVYALVATV LLALVFTGFQ GMEYYQAPFT ISDSIYGSTF FLATGFHGFH VIIGTLFLII CGIRQYLGHL TKEHHVGFEA AAWYWHFVDV VWLFLFVSIY WWGGI* // ID Y08501_68 STANDARD; PRT; 383 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : ccb382 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69825.3 FT PROTEIN_NAME : cytochrome c biogenesis orf382 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 231894 - 233042 FT DIRECTIONS : negative FT EDITING : 15 P(cCg) -> L(cTg) FT EDITING : 35 P(cCt) -> L(cTt) FT EDITING : 48 S(tCg) -> L(tTg) FT EDITING : 53 P(Cct) -> S(Tct) FT EDITING : 67 P(cCt) -> L(cTt) FT EDITING : 88 R(Cgg) -> W(Tgg) FT EDITING : 90 P(cCa) -> L(cTa) FT EDITING : 97 L(Ctt) -> F(Ttt) FT EDITING : 114 H(Cat) -> Y(Tat) FT EDITING : 124 S(tCg) -> L(tTg) FT EDITING : 126 F(ttC) -> F(ttT) FT EDITING : 135 P(cCt) -> L(cTt) FT EDITING : 162 R(Cgt) -> C(Tgt) FT EDITING : 193 R(cgC) -> R(cgT) FT EDITING : 194 S(tCc) -> F(tTc) FT EDITING : 237 P(CCt) -> F(TTt) FT EDITING : 240 S(tCa) -> L(tTa) FT EDITING : 260 S(tCa) -> L(tTa) FT EDITING : 264 P(cCa) -> L(cTa) FT EDITING : 269 S(tCa) -> L(tTa) FT EDITING : 319 R(Cgc) -> C(Tgc) FT CODON_START : 1 CL CDNALEN 1149 NT; CD 1 atgtcaatat caatatatga attctttcat tattcgttat ttcCgggtct CD 51 tttcgttgca ttcacttaca acaagaaaca accaccagcg tttggtgcag CD 101 cacCtgcatt ttggtgcatt cttctttctt tccttggtct ttCgttctgt CD 151 catattCcta ataacttatc caattacaac gtattaaccg ctaatgcacC CD 201 tttcttttat caaatctcag gaacatggtc taatcatgag ggtagtattt CD 251 tattatggtg tCggatccCa aatttttatg gattttttCt ttgttaccgg CD 301 ggtcgacccc agagccataa tgtcttaaaa caaggaggcC atagggaaag CD 351 tctttttttt ttttttgtct CgaacttCgt gaagaactca attttatctc CD 401 tccCtcgtta cgaacaagaa agtggtttga aaaaccagtt gtacactccc CD 451 ttcgttctac gaacccttgt tgattctgaa cttCgttcgc gaaggaaccg CD 501 gacttttgac ggaccagccc ttttttatgc gccgctttat cctgaaagga CD 551 aaattaaaaa tcctctggac gcttggcgCt Cccgtggttc gcgagaagga CD 601 aaaaggactc atcctttgtt gcatctggca cgagatgata aagagagagc CD 651 ttcgtctatc gatgaacagc gaattgacgg agctcttggc attgctttgt CD 701 ttttctctCC tttcctatCa gcgagttccg atccttttgt tcgaaatttc CD 751 tttgtttgta ccgaaccgct tgcagaatCa aatcctgttc Cacaagatcc CD 801 tatatCagct atacatcctc cttgcattta tgccggggac gtcgccagtg CD 851 cggagggctt tggcttatgt agatcaaaaa tgatgaatgg gattgtggca CD 901 ctccactcgc cgccaatgcg gaaggatgcc gccgaaaaga atggaacgct CD 951 gcttCgctct gctggatgcg tcggatcccg tataacaagc gagcttttta CD 1001 ccctaaaatt caaacatgtg ggcgcaaaat gctatcctgc tctattgtta CD 1051 cgtagcaata gaagcccgct catgctgctt cggcggcgct ttttcgcctt CD 1101 ctcttcgttc tgggcaggag cgagaagcca ctcgactaaa aggtactga FT EDITED CDNA CD 1 atgtcaatat caatatatga attctttcat tattcgttat ttcTgggtct CD 51 tttcgttgca ttcacttaca acaagaaaca accaccagcg tttggtgcag CD 101 cacTtgcatt ttggtgcatt cttctttctt tccttggtct ttTgttctgt CD 151 catattTcta ataacttatc caattacaac gtattaaccg ctaatgcacT CD 201 tttcttttat caaatctcag gaacatggtc taatcatgag ggtagtattt CD 251 tattatggtg tTggatccTa aatttttatg gattttttTt ttgttaccgg CD 301 ggtcgacccc agagccataa tgtcttaaaa caaggaggcT atagggaaag CD 351 tctttttttt ttttttgtct TgaacttTgt gaagaactca attttatctc CD 401 tccTtcgtta cgaacaagaa agtggtttga aaaaccagtt gtacactccc CD 451 ttcgttctac gaacccttgt tgattctgaa cttTgttcgc gaaggaaccg CD 501 gacttttgac ggaccagccc ttttttatgc gccgctttat cctgaaagga CD 551 aaattaaaaa tcctctggac gcttggcgTt Tccgtggttc gcgagaagga CD 601 aaaaggactc atcctttgtt gcatctggca cgagatgata aagagagagc CD 651 ttcgtctatc gatgaacagc gaattgacgg agctcttggc attgctttgt CD 701 ttttctctTT tttcctatTa gcgagttccg atccttttgt tcgaaatttc CD 751 tttgtttgta ccgaaccgct tgcagaatTa aatcctgttc Tacaagatcc CD 801 tatatTagct atacatcctc cttgcattta tgccggggac gtcgccagtg CD 851 cggagggctt tggcttatgt agatcaaaaa tgatgaatgg gattgtggca CD 901 ctccactcgc cgccaatgcg gaaggatgcc gccgaaaaga atggaacgct CD 951 gcttTgctct gctggatgcg tcggatcccg tataacaagc gagcttttta CD 1001 ccctaaaatt caaacatgtg ggcgcaaaat gctatcctgc tctattgtta CD 1051 cgtagcaata gaagcccgct catgctgctt cggcggcgct ttttcgcctt CD 1101 ctcttcgttc tgggcaggag cgagaagcca ctcgactaaa aggtactga SQ SEQUENCE 383 AA; MSISIYEFFH YSLFLGLFVA FTYNKKQPPA FGAALAFWCI LLSFLGLLFC HISNNLSNYN VLTANALFFY QISGTWSNHE GSILLWCWIL NFYGFFFCYR GRPQSHNVLK QGGYRESLFF FFVLNFVKNS ILSLLRYEQE SGLKNQLYTP FVLRTLVDSE LCSRRNRTFD GPALFYAPLY PERKIKNPLD AWRFRGSREG KRTHPLLHLA RDDKERASSI DEQRIDGALG IALFFSFFLL ASSDPFVRNF FVCTEPLAEL NPVLQDPILA IHPPCIYAGD VASAEGFGLC RSKMMNGIVA LHSPPMRKDA AEKNGTLLCS AGCVGSRITS ELFTLKFKHV GAKCYPALLL RSNRSPLMLL RRRFFAFSSF WAGARSHSTK RY* // ID Y08501_75 STANDARD; PRT; 257 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : ccb256 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69832.3 FT PROTEIN_NAME : cytochrome c biogenesis orf256 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 239988 - 240758 FT DIRECTIONS : negative FT EDITING : 35 H(Cat) -> Y(Tat) FT EDITING : 45 L(Ctt) -> F(Ttt) FT EDITING : 60 A(gCg) -> V(gTg) FT EDITING : 62 R(Cgg) -> W(Tgg) FT EDITING : 88 R(Cgc) -> C(Tgc) FT EDITING : 111 R(Cgg) -> W(Tgg) FT EDITING : 132 S(tCg) -> L(tTg) FT EDITING : 134 L(Ctt) -> F(Ttt) FT EDITING : 141 R(Cgt) -> C(Tgt) FT EDITING : 149 P(cCg) -> L(cTg) FT EDITING : 153 S(tCa) -> L(tTa) FT EDITING : 155 R(Cgt) -> C(Tgt) FT EDITING : 156 A(gCt) -> V(gTt) FT EDITING : 158 P(cCg) -> L(cTg) FT EDITING : 159 I(atC) -> I(atT) FT EDITING : 166 S(tCt) -> F(tTt) FT EDITING : 174 S(tCg) -> L(tTg) FT EDITING : 183 S(tCt) -> F(tTt) FT EDITING : 190 P(Cct) -> S(Tct) FT EDITING : 192 P(cCc) -> L(cTc) FT EDITING : 203 P(cCc) -> L(cTc) FT EDITING : 205 S(tCa) -> L(tTa) FT EDITING : 206 T(acC) -> T(acT) FT EDITING : 207 R(Cgt) -> C(Tgt) FT EDITING : 208 I(atC) -> I(atT) FT EDITING : 217 P(cCt) -> L(cTt) FT EDITING : 219 P(cCa) -> L(cTa) FT EDITING : 225 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 771 NT; CD 1 atgtccgttt cgttattaca accttctttt ttgatgtcaa agaccagaag CD 51 ctacgcgcaa attctcattg ggtcttggtt gttcttaaca gcgatggcta CD 101 ttCatttaag tcttggggta gcaccactag atCttcaaca aggtggaaat CD 151 tctcgtattc tctatgtaca tgttcctgCg gctCggatga gtattattgt CD 201 ttatatcgcc acggctataa acactttctt gttcctatta acaaaacatc CD 251 ccctttatct tCgctcttcc ggaaccggta tagaaatggg tgcttttttt CD 301 acgttgttta ccttagttac tggggggttt Cggggaagac caatgtgggg CD 351 gaccttttgg gtgtgggatg ctcgtttgac ctctgtattc atctCgtttC CD 401 ttatttacct gggtgcactg Cgttttcaaa agcttcctgt cgaacCggct CD 451 tctatttCaa ttCgtgCtgg acCgatCgat ataccaataa taaagtCttc CD 501 agtcaactgg tggaatacat Cgcatcaacc tgggagcatt agccgatCtg CD 551 gtacatcaat acatgttCct atgcCcattc caatcttgtc taactttgct CD 601 aacttccCct tctCaacCCg tatCttgttt gttctggaaa cacgtcttcC CD 651 tattcCatct tttctcgaat ctCctataac ggaagaaatt gaagctcgag CD 701 aaggaatacc aaaacctagt tcactcgctc tctttgcatc catggctgaa CD 751 tggttaaagc gcccaaccta a FT EDITED CDNA CD 1 atgtccgttt cgttattaca accttctttt ttgatgtcaa agaccagaag CD 51 ctacgcgcaa attctcattg ggtcttggtt gttcttaaca gcgatggcta CD 101 ttTatttaag tcttggggta gcaccactag atTttcaaca aggtggaaat CD 151 tctcgtattc tctatgtaca tgttcctgTg gctTggatga gtattattgt CD 201 ttatatcgcc acggctataa acactttctt gttcctatta acaaaacatc CD 251 ccctttatct tTgctcttcc ggaaccggta tagaaatggg tgcttttttt CD 301 acgttgttta ccttagttac tggggggttt Tggggaagac caatgtgggg CD 351 gaccttttgg gtgtgggatg ctcgtttgac ctctgtattc atctTgtttT CD 401 ttatttacct gggtgcactg Tgttttcaaa agcttcctgt cgaacTggct CD 451 tctatttTaa ttTgtgTtgg acTgatTgat ataccaataa taaagtTttc CD 501 agtcaactgg tggaatacat Tgcatcaacc tgggagcatt agccgatTtg CD 551 gtacatcaat acatgttTct atgcTcattc caatcttgtc taactttgct CD 601 aacttccTct tctTaacTTg tatTttgttt gttctggaaa cacgtcttcT CD 651 tattcTatct tttctcgaat ctTctataac ggaagaaatt gaagctcgag CD 701 aaggaatacc aaaacctagt tcactcgctc tctttgcatc catggctgaa CD 751 tggttaaagc gcccaaccta a SQ SEQUENCE 257 AA; MSVSLLQPSF LMSKTRSYAQ ILIGSWLFLT AMAIYLSLGV APLDFQQGGN SRILYVHVPV AWMSIIVYIA TAINTFLFLL TKHPLYLCSS GTGIEMGAFF TLFTLVTGGF WGRPMWGTFW VWDARLTSVF ILFFIYLGAL CFQKLPVELA SILICVGLID IPIIKFSVNW WNTLHQPGSI SRFGTSIHVS MLIPILSNFA NFLFLTCILF VLETRLLILS FLESSITEEI EAREGIPKPS SLALFASMAE WLKRPT* // ID Y08501_79 STANDARD; PRT; 204 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT C-terminal not determined FT GENE : ccb203 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69836.3 FT PROTEIN_NAME : cytochrome c biogenesis orf203 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 256865 - 257476 FT DIRECTIONS : negative FT EDITING : 22 S(tCg) -> L(tTg) FT EDITING : 59 P(cCa) -> L(cTa) FT EDITING : 70 R(Cgg) -> W(Tgg) FT EDITING : 76 R(Cgg) -> W(Tgg) FT EDITING : 87 R(Cgg) -> W(Tgg) FT EDITING : 93 R(Cgt) -> C(Tgt) FT EDITING : 101 L(Ctt) -> F(Ttt) FT EDITING : 107 S(tCg) -> L(tTg) FT EDITING : 115 P(cCa) -> L(cTa) FT EDITING : 119 S(tCa) -> L(tTa) FT EDITING : 131 P(Ccc) -> S(Tcc) FT EDITING : 156 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 612 NT; CD 1 gtggacacgg ggagggagca ggcgaagcgt gtcgttcgta atggaaagaa CD 51 agagaccact acttCgcctc tttgttggac cgccggcgcg aacacagtgg CD 101 tctctgatca ggaccaggaa ccaattcgaa tttggatctt gacatgttgg CD 151 tggtttttaa ccgtaggcat cttgcCagga agttggtggg cttatcatga CD 201 attaggtCgg ggtggctggt ggtttCggga tcccgtagaa aatgcttctt CD 251 ttatgcctCg ggtattagcc acagctCgta ttcattctgt aattttaccc CD 301 Cttcttcatt cttggacctC gtttcttaat attgtgactt ttcCatgctg CD 351 tgtctCagga accttttcaa tacggtccgg attgctagct Cccgttcata CD 401 gttttgctac agatgataca cgaggaatct ttttatggtg gttcttcctt CD 451 ctaatgaccg gcatatCtat gattcttttc taccagatga agcagcaggc CD 501 atcggtccgt agaacgtata aaaaagagat ggttgtggcg cgaagtactc CD 551 ttgtgcatct acgtcactcg gctcgcgcgc aaccccgccc cgttatgtta CD 601 tggaagaatt ga FT EDITED CDNA CD 1 gtggacacgg ggagggagca ggcgaagcgt gtcgttcgta atggaaagaa CD 51 agagaccact acttTgcctc tttgttggac cgccggcgcg aacacagtgg CD 101 tctctgatca ggaccaggaa ccaattcgaa tttggatctt gacatgttgg CD 151 tggtttttaa ccgtaggcat cttgcTagga agttggtggg cttatcatga CD 201 attaggtTgg ggtggctggt ggtttTggga tcccgtagaa aatgcttctt CD 251 ttatgcctTg ggtattagcc acagctTgta ttcattctgt aattttaccc CD 301 Tttcttcatt cttggacctT gtttcttaat attgtgactt ttcTatgctg CD 351 tgtctTagga accttttcaa tacggtccgg attgctagct Tccgttcata CD 401 gttttgctac agatgataca cgaggaatct ttttatggtg gttcttcctt CD 451 ctaatgaccg gcatatTtat gattcttttc taccagatga agcagcaggc CD 501 atcggtccgt agaacgtata aaaaagagat ggttgtggcg cgaagtactc CD 551 ttgtgcatct acgtcactcg gctcgcgcgc aaccccgccc cgttatgtta CD 601 tggaagaatt ga SQ SEQUENCE 204 AA; VDTGREQAKR VVRNGKKETT TLPLCWTAGA NTVVSDQDQE PIRIWILTCW WFLTVGILLG SWWAYHELGW GGWWFWDPVE NASFMPWVLA TACIHSVILP FLHSWTLFLN IVTFLCCVLG TFSIRSGLLA SVHSFATDDT RGIFLWWFFL LMTGIFMILF YQMKQQASVR RTYKKEMVVA RSTLVHLRHS ARAQPRPVML WKN* // ID Y08501_81 STANDARD; PRT; 126 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : rpsl2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69838.3 FT PROTEIN_NAME : ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 260224 - 260601 FT DIRECTIONS : negative FT EDITING : 28 P(ccC) -> P(ccT) FT EDITING : 35 P(cCg) -> L(cTg) FT EDITING : 49 P(cCa) -> L(cTa) FT EDITING : 66 H(Cac) -> Y(Tac) FT EDITING : 74 S(tCg) -> L(tTg) FT EDITING : 90 S(tCg) -> L(tTg) FT EDITING : 95 S(tCC) -> F(tTT) FT CODON_START : 1 CL CDNALEN 378 NT; CD 1 atgcccacgt ttaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt tggataaatg tccCcagaaa acaggagtat CD 101 gccCgcgtgt ttcaacgaga acaccgaaaa aacctaattc cgctcCacgt CD 151 aagatagcca aagtacggtt gagcaatcga catgatatat ttgctCacat CD 201 cccgggcgaa ggtcataatt Cgcaggaaca ttctacggtg ttaataagag CD 251 gaggtagagt gaaagattCg ccaggtgtaa aatCCcattg tattcgagga CD 301 gtaaaggatt tgatgggaat tccgggtcga agaagaggca gatcaaaata CD 351 tggtgcagaa aaacccaaat cgatatga FT EDITED CDNA CD 1 atgcccacgt ttaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt tggataaatg tccTcagaaa acaggagtat CD 101 gccTgcgtgt ttcaacgaga acaccgaaaa aacctaattc cgctcTacgt CD 151 aagatagcca aagtacggtt gagcaatcga catgatatat ttgctTacat CD 201 cccgggcgaa ggtcataatt Tgcaggaaca ttctacggtg ttaataagag CD 251 gaggtagagt gaaagattTg ccaggtgtaa aatTTcattg tattcgagga CD 301 gtaaaggatt tgatgggaat tccgggtcga agaagaggca gatcaaaata CD 351 tggtgcagaa aaacccaaat cgatatga SQ SEQUENCE 126 AA; MPTFNQLIRH GREEKRRTDR TRALDKCPQK TGVCLRVSTR TPKKPNSALR KIAKVRLSNR HDIFAYIPGE GHNLQEHSTV LIRGGRVKDL PGVKFHCIRG VKDLMGIPGR RRGRSKYGAE KPKSI* // ID Y08501_82 STANDARD; PRT; 120 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : nad3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69839.3 FT PROTEIN_NAME : NADH dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 260647 - 261006 FT DIRECTIONS : negative FT EDITING : 22 L(Cta) -> L(Tta) FT EDITING : 23 L(ctC) -> L(ctT) FT EDITING : 28 P(cCa) -> L(cTa) FT EDITING : 50 S(tCc) -> F(tTc) FT EDITING : 71 P(CCt) -> F(TTt) FT EDITING : 84 P(Cct) -> S(Tct) FT EDITING : 85 P(cCc) -> L(cTc) FT EDITING : 116 S(tCg) -> L(tTg) FT EDITING : 118 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 360 NT; CD 1 atgatgtcag aatttgcacc aatttctatc tatttagtga ttagtctgct CD 51 agtttctttg atcCtactCg gtgttccttt tcCatttgct tccaatagtt CD 101 ctacctaccc agaaaaattg tcggcctacg aatgtggttt cgatccttCc CD 151 ggtgatgcca gaagtcgttt cgatatacga ttttatcttg tttcaatttt CD 201 atttttaatc CCtgatctgg aagtaacctt tttctttcct tgggcagtaC CD 251 ctcCcaacaa gattgatctg tttggatttt ggtccatgat ggccttttta CD 301 tttattttga cgattggatt tctatatgaa tggaaaaggg gtgcttCgga CD 351 tCgggagtaa FT EDITED CDNA CD 1 atgatgtcag aatttgcacc aatttctatc tatttagtga ttagtctgct CD 51 agtttctttg atcTtactTg gtgttccttt tcTatttgct tccaatagtt CD 101 ctacctaccc agaaaaattg tcggcctacg aatgtggttt cgatccttTc CD 151 ggtgatgcca gaagtcgttt cgatatacga ttttatcttg tttcaatttt CD 201 atttttaatc TTtgatctgg aagtaacctt tttctttcct tgggcagtaT CD 251 ctcTcaacaa gattgatctg tttggatttt ggtccatgat ggccttttta CD 301 tttattttga cgattggatt tctatatgaa tggaaaaggg gtgcttTgga CD 351 tTgggagtaa SQ SEQUENCE 120 AA; MMSEFAPISI YLVISLLVSL ILLGVPFLFA SNSSTYPEKL SAYECGFDPF GDARSRFDIR FYLVSILFLI FDLEVTFFFP WAVSLNKIDL FGFWSMMAFL FILTIGFLYE WKRGALDWE* // ID Y08501_83 STANDARD; PRT; 115 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : nad1 FT NOTE : unnamed protein product; orf114 FT LOCUS_TAG : FT PROTEIN_ID : CAA69840.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 260963 - 261307 FT DIRECTIONS : negative FT EDITING : 103 V(gtC) -> V(gtT) FT EDITING : 109 F(ttC) -> F(ttT) FT CODON_START : 1 CL CDNALEN 345 NT; CD 1 atgacccaac cggcgattgg atggcgcgtg gggctcgggc cctcgataat CD 51 ccgaggacca ctagtgggga agagtccttg gagcgtcttt atgatatatg CD 101 gaaggacctc caagaaaccg ggcccctctc ggacgagttt tctcgtttac CD 151 aagagaaagt attcctcaag aaaggcggcc ctggggggga ccctatcgca CD 201 taaggtctgc aagcctttcg ggatgggctt ttgcttcttt ctttattttt CD 251 cgatatgccg cttcttcgcc agcaaggagc gagaaaacaa agtgggctgt CD 301 aatgatgtCa gaatttgcac caatttCtat ctatttagtg attag FT EDITED CDNA CD 1 atgacccaac cggcgattgg atggcgcgtg gggctcgggc cctcgataat CD 51 ccgaggacca ctagtgggga agagtccttg gagcgtcttt atgatatatg CD 101 gaaggacctc caagaaaccg ggcccctctc ggacgagttt tctcgtttac CD 151 aagagaaagt attcctcaag aaaggcggcc ctggggggga ccctatcgca CD 201 taaggtctgc aagcctttcg ggatgggctt ttgcttcttt ctttattttt CD 251 cgatatgccg cttcttcgcc agcaaggagc gagaaaacaa agtgggctgt CD 301 aatgatgtTa gaatttgcac caatttTtat ctatttagtg attag SQ SEQUENCE 115 AA; MTQPAIGWRV GLGPSIIRGP LVGKSPWSVF MIYGRTSKKP GPSRTSFLVY KRKYSSRKAA LGGTLSHKVC KPFGMGFCFF LYFSICRFFA SKERENKVGC NDVRICTNFY LFSD* // ID Y08501_90 STANDARD; PRT; 86 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : atp9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69793.3 FT PROTEIN_NAME : ATPase subunit 9 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 278895 - 279152 FT DIRECTIONS : positive FT EDITING : 18 S(tCa) -> L(tTa) FT EDITING : 28 S(tCa) -> L(tTa) FT EDITING : 56 S(tCa) -> L(tTa) FT EDITING : 75 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 258 NT; CD 1 atgacaaagc gtgagtataa ttctcaaccc gagatgttag aaggtgcaaa CD 51 atCaataggt gccggagctg ctacaattgc ttCagcggga gctgctatcg CD 101 gtattggaaa cgtattcagt tctttgattc attctgtggc gcgaaatcca CD 151 tcattggcta aacaatCatt tggttatgcc attttgggct ttgctctaac CD 201 cgaagctatt gcattgtttg cccCaatgat ggcctttttg atcttattcg CD 251 tattctga FT EDITED CDNA CD 1 atgacaaagc gtgagtataa ttctcaaccc gagatgttag aaggtgcaaa CD 51 atTaataggt gccggagctg ctacaattgc ttTagcggga gctgctatcg CD 101 gtattggaaa cgtattcagt tctttgattc attctgtggc gcgaaatcca CD 151 tcattggcta aacaatTatt tggttatgcc attttgggct ttgctctaac CD 201 cgaagctatt gcattgtttg cccTaatgat ggcctttttg atcttattcg CD 251 tattctga SQ SEQUENCE 86 AA; MTKREYNSQP EMLEGAKLIG AGAATIALAG AAIGIGNVFS SLIHSVARNP SLAKQLFGYA ILGFALTEAI ALFALMMAFL ILFVF* // ID Y08501_99 STANDARD; PRT; 508 AA. AC Y08501; DT Tue Jul 21 07:06:44 2009 DE Arabidopsis thaliana mitochondrial genome. OS mitochondrion Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL DNA Res. 3 (5), 287-290 (1996) RL PUBMED 9039497 FT Full length CDS FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA69802.3 FT PROTEIN_NAME : ATPase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 302166 - 303689 FT DIRECTIONS : negative FT EDITING : 370 V(gtC) -> V(gtT) FT EDITING : 393 S(tCa) -> L(tTa) FT EDITING : 431 P(cCg) -> L(cTg) FT EDITING : 472 P(cCa) -> L(cTa) FT EDITING : 495 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1524 NT; CD 1 atggaattat ctcctagagc tgcggaacta acgaatctat tcgaaagtcg CD 51 aattaggaac ttttacgcga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacaagttt atggattgaa cgagattcaa CD 151 gctggggaaa tggttctttt tgccaacggt gtgaaaggaa tggccttgaa CD 201 tcttgagaat gagaatgtcg ggattgttgt ctttggtggt gataccgcta CD 251 taaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttccc CD 301 gcgggaaagg ctatgctagg gcgtgtggtc gacgcgatgg gagtacctat CD 351 tgatggaaaa ggggctctaa gcgatcacga gcaaagacgt gtcgaagtga CD 401 aagcccctgg gattcttgaa cgtaaatcag tgcacgagcc tatgcaaaca CD 451 gggttaaaag cggtagatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttctaatc ggtggccgac aaactggaaa aacgactatt gctatcgata CD 551 ccatattaaa ccaaaagcaa ataaactcaa gggccacctc tgagagtgag CD 601 acaatgtatt gtgtctatgt agcgattgga cagaaacgct cgactgtggg CD 651 acaattaatt caaactcttg aagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctctgcaatt tttggcccca CD 751 tattccgggt gtgccatggg ggaatatttc cgcgataatg gaatgcacgc CD 801 attaataatc tatgatgatc ttagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggtgat CD 901 gttttctatt tacattcccg tctcttagaa agagcggcta aacgatcgga CD 951 ccagacaggt gcaggtagct tgaccgcctt acccgtcatt gaaacacaag CD 1001 ctggagacgt atcggcctat attcccacca atgtgatctc cattactgat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtC ggcttatctg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtatgc ggtagttCaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgcctttgc tcaatttggc tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct gacagaagta cCgaaacaac CD 1301 cacaatatgc accacttcca attgaaaaac aaatactagt catttatgca CD 1351 gctgtcaatg gattctgtga tcgaatgcca ctagacagaa tctctcaata CD 1401 tgagaaagcc attcCaaata gtgtcaaacc tgaattacta caagccctta CD 1451 aaggtggatt aactaacgaa agaaaaatgg aacCagatgc tttcttaaaa CD 1501 gaaagagctt tagctttaat ttag FT EDITED CDNA CD 1 atggaattat ctcctagagc tgcggaacta acgaatctat tcgaaagtcg CD 51 aattaggaac ttttacgcga attttcaagt ggatgagatc ggtcgagtgg CD 101 tctcagttgg agatgggatt gcacaagttt atggattgaa cgagattcaa CD 151 gctggggaaa tggttctttt tgccaacggt gtgaaaggaa tggccttgaa CD 201 tcttgagaat gagaatgtcg ggattgttgt ctttggtggt gataccgcta CD 251 taaaagaagg agatcttgtc aagcgcactg gatctattgt ggatgttccc CD 301 gcgggaaagg ctatgctagg gcgtgtggtc gacgcgatgg gagtacctat CD 351 tgatggaaaa ggggctctaa gcgatcacga gcaaagacgt gtcgaagtga CD 401 aagcccctgg gattcttgaa cgtaaatcag tgcacgagcc tatgcaaaca CD 451 gggttaaaag cggtagatag cctggttcct ataggccgtg gtcaacgaga CD 501 acttctaatc ggtggccgac aaactggaaa aacgactatt gctatcgata CD 551 ccatattaaa ccaaaagcaa ataaactcaa gggccacctc tgagagtgag CD 601 acaatgtatt gtgtctatgt agcgattgga cagaaacgct cgactgtggg CD 651 acaattaatt caaactcttg aagaagcgaa tgctttggaa tattccattc CD 701 ttgtagcagc caccgcttcg gatcctgctc ctctgcaatt tttggcccca CD 751 tattccgggt gtgccatggg ggaatatttc cgcgataatg gaatgcacgc CD 801 attaataatc tatgatgatc ttagtaaaca ggcggtggca tatcgacaaa CD 851 tgtcattatt gttacgccga ccaccaggcc gtgaggcttt cccaggtgat CD 901 gttttctatt tacattcccg tctcttagaa agagcggcta aacgatcgga CD 951 ccagacaggt gcaggtagct tgaccgcctt acccgtcatt gaaacacaag CD 1001 ctggagacgt atcggcctat attcccacca atgtgatctc cattactgat CD 1051 ggacaaatct gtttggaaac agagctcttt tatcgcggaa ttagacctgc CD 1101 tattaacgtT ggcttatctg tcagtcgcgt cgggtctgcc gctcagttga CD 1151 aagctatgaa acaagtatgc ggtagttTaa aactggaatt ggcacaatat CD 1201 cgcgaagtgg ccgcctttgc tcaatttggc tcagaccttg atgctgcgac CD 1251 tcaggcatta ctcaatagag gtgcaaggct gacagaagta cTgaaacaac CD 1301 cacaatatgc accacttcca attgaaaaac aaatactagt catttatgca CD 1351 gctgtcaatg gattctgtga tcgaatgcca ctagacagaa tctctcaata CD 1401 tgagaaagcc attcTaaata gtgtcaaacc tgaattacta caagccctta CD 1451 aaggtggatt aactaacgaa agaaaaatgg aacTagatgc tttcttaaaa CD 1501 gaaagagctt tagctttaat ttag SQ SEQUENCE 508 AA; MELSPRAAEL TNLFESRIRN FYANFQVDEI GRVVSVGDGI AQVYGLNEIQ AGEMVLFANG VKGMALNLEN ENVGIVVFGG DTAIKEGDLV KRTGSIVDVP AGKAMLGRVV DAMGVPIDGK GALSDHEQRR VEVKAPGILE RKSVHEPMQT GLKAVDSLVP IGRGQRELLI GGRQTGKTTI AIDTILNQKQ INSRATSESE TMYCVYVAIG QKRSTVGQLI QTLEEANALE YSILVAATAS DPAPLQFLAP YSGCAMGEYF RDNGMHALII YDDLSKQAVA YRQMSLLLRR PPGREAFPGD VFYLHSRLLE RAAKRSDQTG AGSLTALPVI ETQAGDVSAY IPTNVISITD GQICLETELF YRGIRPAINV GLSVSRVGSA AQLKAMKQVC GSLKLELAQY REVAAFAQFG SDLDAATQAL LNRGARLTEV LKQPQYAPLP IEKQILVIYA AVNGFCDRMP LDRISQYEKA ILNSVKPELL QALKGGLTNE RKMELDAFLK ERALALI* // ID Y13729_1 STANDARD; PRT; 179 AA. AC Y13729; DT Tue Jul 21 07:06:44 2009 DE Hordeum vulgare chloroplast DNA for ndhA gene 3'end (exons 1 & 2). OS chloroplast Hordeum vulgare subsp. vulgare (domesticated barley) OC Hordeum vulgare subsp. vulgare RN [1] RL Plant Physiol. 115 (1), 313-315 (1997) RL PUBMED 9380777 FT N-terminal not determined FT GENE : ndhA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA74057.1 FT PROTEIN_NAME : NDH-A protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 13 - 551 FT DIRECTIONS : positive FT EDITING : 4 S(tCa) -> L(tTa) FT EDITING : 173 S(tCt) -> F(tTt) FT CODON_START : 3 CL CDNALEN 539 NT; CD 1 tatctaacag ttCaagtaca gttgatatag ttgaagcaca gtcaaaatat CD 51 ggtttttttg gatggaatat ttggcgtcag cctataggct ttctggtttt CD 101 tttaatttct tctttggcag aatgtgaaag attacccttt gatttaccag CD 151 aagcagagga agaattagta gcaggttacc aaactgaata ttccggtatc CD 201 aaatatggtt tattttatct tgtttcttac ctaaatttat tagtttcttc CD 251 tttatttgta acagttctct acttgggcgg gtggaatttc tctattccct CD 301 atatatcctt ttttgatttt ttccaaatga ataaagcagt tggaattttg CD 351 gaaatgacaa tgggtatatt tattacatta actaaagctt atttatttct CD 401 cttcatttct atcacaataa gatggacttt accaaggatg agaatggatc CD 451 agttattaaa tcttggatgg aaatttcttt tacctatttc cctgggcaat CD 501 ctattattaa caacctcttC tcaacttgtt tcactataa FT EDITED CDNA CD 1 tatctaacag ttTaagtaca gttgatatag ttgaagcaca gtcaaaatat CD 51 ggtttttttg gatggaatat ttggcgtcag cctataggct ttctggtttt CD 101 tttaatttct tctttggcag aatgtgaaag attacccttt gatttaccag CD 151 aagcagagga agaattagta gcaggttacc aaactgaata ttccggtatc CD 201 aaatatggtt tattttatct tgtttcttac ctaaatttat tagtttcttc CD 251 tttatttgta acagttctct acttgggcgg gtggaatttc tctattccct CD 301 atatatcctt ttttgatttt ttccaaatga ataaagcagt tggaattttg CD 351 gaaatgacaa tgggtatatt tattacatta actaaagctt atttatttct CD 401 cttcatttct atcacaataa gatggacttt accaaggatg agaatggatc CD 451 agttattaaa tcttggatgg aaatttcttt tacctatttc cctgggcaat CD 501 ctattattaa caacctcttT tcaacttgtt tcactataa SQ SEQUENCE 179 AA; SNSLSTVDIV EAQSKYGFFG WNIWRQPIGF LVFLISSLAE CERLPFDLPE AEEELVAGYQ TEYSGIKYGL FYLVSYLNLL VSSLFVTVLY LGGWNFSIPY ISFFDFFQMN KAVGILEMTM GIFITLTKAY LFLFISITIR WTLPRMRMDQ LLNLGWKFLL PISLGNLLLT TSFQLVSL* // ID Y13730_1 STANDARD; PRT; 184 AA. AC Y13730; DT Tue Jul 21 07:06:44 2009 DE Hordeum vulgare chloroplast DNA for ndhA gene 5'end (exons 1 & 2). OS chloroplast Hordeum vulgare subsp. vulgare (domesticated barley) OC Hordeum vulgare subsp. vulgare RN [1] RL Plant Physiol. 115 (1), 313-315 (1997) RL PUBMED 9380777 FT C-terminal not determined FT GENE : ndhA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA74058.1 FT PROTEIN_NAME : NDH-A protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 61 - 610 FT DIRECTIONS : positive FT EDITING : 17 S(tCg) -> L(tTg) FT EDITING : 158 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 550 NT; CD 1 atgataatag atagggtaga ggtagaaact atcaattctt tttcgaaatC CD 51 ggaattatta aaagaagtct atggactgat atcgattcta cccattttga CD 101 ccctcctttt aggaattaca atagaggtac tcgtaattgt gtggttagaa CD 151 agagaaatat ctgcgtcgat acaacaacgt attggtcctg aatatgctgg CD 201 ccccctgggc ctgcttcaag ctatagcaga tgggactaaa ctacttttta CD 251 aagaagatat tctgccatcg cgaggagata tttctttatt tagcattgga CD 301 ccttctatag cagtcatatc agttttatta agttttttag ttatcccttt CD 351 gggatatcat tttgttttag ccgatcttag tattggtgtt tttttatgga CD 401 ttgccatttc aagtatagct cctattggtc ttcttatggc aggatatagc CD 451 tcaaataata aatattcttt ttCaggcggt ctacgagctg ctgctcaatc CD 501 cattagttat gaaataccat taactttttg tgtgctagca atatctctac FT EDITED CDNA CD 1 atgataatag atagggtaga ggtagaaact atcaattctt tttcgaaatT CD 51 ggaattatta aaagaagtct atggactgat atcgattcta cccattttga CD 101 ccctcctttt aggaattaca atagaggtac tcgtaattgt gtggttagaa CD 151 agagaaatat ctgcgtcgat acaacaacgt attggtcctg aatatgctgg CD 201 ccccctgggc ctgcttcaag ctatagcaga tgggactaaa ctacttttta CD 251 aagaagatat tctgccatcg cgaggagata tttctttatt tagcattgga CD 301 ccttctatag cagtcatatc agttttatta agttttttag ttatcccttt CD 351 gggatatcat tttgttttag ccgatcttag tattggtgtt tttttatgga CD 401 ttgccatttc aagtatagct cctattggtc ttcttatggc aggatatagc CD 451 tcaaataata aatattcttt ttTaggcggt ctacgagctg ctgctcaatc CD 501 cattagttat gaaataccat taactttttg tgtgctagca atatctctac SQ SEQUENCE 184 AA; MIIDRVEVET INSFSKLELL KEVYGLISIL PILTLLLGIT IEVLVIVWLE REISASIQQR IGPEYAGPLG LLQAIADGTK LLFKEDILPS RGDISLFSIG PSIAVISVLL SFLVIPLGYH FVLADLSIGV FLWIAISSIA PIGLLMAGYS SNNKYSFLGG LRAAAQSISY EIPLTFCVLA ISLX // ID Y13920_1 STANDARD; PRT; 363 AA. AC Y13920; DT Tue Jul 21 07:06:44 2009 DE Triticum aestivum rps2 gene. OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Mol. Gen. Genet. 258 (5), 530-537 (1998) RL PUBMED 9669335 FT Full length CDS FT GENE : rps2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA74226.1 FT PROTEIN_NAME : ribosomal protein S2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 913 - 2001 FT DIRECTIONS : positive FT EDITING : 60 P(Ccc) -> S(Tcc) FT EDITING : 67 S(tCc) -> F(tTc) FT EDITING : 85 A(gCg) -> V(gTg) FT EDITING : 162 P(cCa) -> L(cTa) FT EDITING : 186 P(Cct) -> S(Tct) FT EDITING : 194 R(Cgt) -> C(Tgt) FT EDITING : 196 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 1089 NT; CD 1 atgacaatgc tttcgatagt ctgtactaaa ttactttgta cgaatgcaca CD 51 tctcggccgt cgggtagctg atcaccattt caaagtctat atccgtggtt CD 101 caagaaatgg aattgctatt ctcgattcag acaagacact gatttgttta CD 151 cgaaacgctc ttcattttat aggatctCcc agtcgtcaaa aaggccgttC CD 201 cttcttttta aagaccaatc atttatttat ttatgagata acggaagaaa CD 251 tggCgagcta tttaagaagc tatttaagaa atgtgaattc tcattgtttc CD 301 gatgattctc aatggaagat cggggcgttt ttgaccaatt cttttgcaaa CD 351 taaaaaaaaa ttccgttcaa gaaagaagaa gatcaatttt gggttgaacc CD 401 aacaacctga ttgtgtggtt attctgaatg cagatagaaa gtcttcggtc CD 451 atactggaag ctgatcgatc acaaatacct attcCatcct tagttgattc CD 501 tacgatccca tgggaatcct ataaaagaat cacttatccc atcccagcga CD 551 atgatCctat acagttcgta tatctatttC gtcattCgat catgaaaaca CD 601 gtgattcttg aacagaatgc gattagtaga gaagcgcaat ctctcagagt CD 651 cactttgagt acggggaagt ccgcaggagg gatgagatcc gcctgctact CD 701 ccacctcttc ttcttcccca atagacgaag aagaaaatag ggccaaggcg CD 751 ctattggaga tgcgcaaaaa atatccatcg ggagatggcg ctgacgctga CD 801 cgctaacgct cgcaaggcgg ttttgcaggc aatttcacaa aatagttttt CD 851 ttttcgttga gctcataacc cggtttgggc cgattgactc tgagagcgat CD 901 cgaggggtcg cgggctcaca ccttgctttt gcgcatagga tcgaagagat CD 951 cctagaattt catggaaaga gcagcggctc tctgaaagac ctcattgatc CD 1001 tgaaattgga tttggaagac gcctctaaaa gagaggagat tctacttcca CD 1051 tattttttcc tccaaaaaag aggcaaagtc ctagcgtga FT EDITED CDNA CD 1 atgacaatgc tttcgatagt ctgtactaaa ttactttgta cgaatgcaca CD 51 tctcggccgt cgggtagctg atcaccattt caaagtctat atccgtggtt CD 101 caagaaatgg aattgctatt ctcgattcag acaagacact gatttgttta CD 151 cgaaacgctc ttcattttat aggatctTcc agtcgtcaaa aaggccgttT CD 201 cttcttttta aagaccaatc atttatttat ttatgagata acggaagaaa CD 251 tggTgagcta tttaagaagc tatttaagaa atgtgaattc tcattgtttc CD 301 gatgattctc aatggaagat cggggcgttt ttgaccaatt cttttgcaaa CD 351 taaaaaaaaa ttccgttcaa gaaagaagaa gatcaatttt gggttgaacc CD 401 aacaacctga ttgtgtggtt attctgaatg cagatagaaa gtcttcggtc CD 451 atactggaag ctgatcgatc acaaatacct attcTatcct tagttgattc CD 501 tacgatccca tgggaatcct ataaaagaat cacttatccc atcccagcga CD 551 atgatTctat acagttcgta tatctatttT gtcattTgat catgaaaaca CD 601 gtgattcttg aacagaatgc gattagtaga gaagcgcaat ctctcagagt CD 651 cactttgagt acggggaagt ccgcaggagg gatgagatcc gcctgctact CD 701 ccacctcttc ttcttcccca atagacgaag aagaaaatag ggccaaggcg CD 751 ctattggaga tgcgcaaaaa atatccatcg ggagatggcg ctgacgctga CD 801 cgctaacgct cgcaaggcgg ttttgcaggc aatttcacaa aatagttttt CD 851 ttttcgttga gctcataacc cggtttgggc cgattgactc tgagagcgat CD 901 cgaggggtcg cgggctcaca ccttgctttt gcgcatagga tcgaagagat CD 951 cctagaattt catggaaaga gcagcggctc tctgaaagac ctcattgatc CD 1001 tgaaattgga tttggaagac gcctctaaaa gagaggagat tctacttcca CD 1051 tattttttcc tccaaaaaag aggcaaagtc ctagcgtga SQ SEQUENCE 363 AA; MTMLSIVCTK LLCTNAHLGR RVADHHFKVY IRGSRNGIAI LDSDKTLICL RNALHFIGSS SRQKGRFFFL KTNHLFIYEI TEEMVSYLRS YLRNVNSHCF DDSQWKIGAF LTNSFANKKK FRSRKKKINF GLNQQPDCVV ILNADRKSSV ILEADRSQIP ILSLVDSTIP WESYKRITYP IPANDSIQFV YLFCHLIMKT VILEQNAISR EAQSLRVTLS TGKSAGGMRS ACYSTSSSSP IDEEENRAKA LLEMRKKYPS GDGADADANA RKAVLQAISQ NSFFFVELIT RFGPIDSESD RGVAGSHLAF AHRIEEILEF HGKSSGSLKD LIDLKLDLED ASKREEILLP YFFLQKRGKV LA* // ID Y16182_1 STANDARD; PRT; 156 AA. AC Y16182; DT Tue Jul 21 07:06:45 2009 DE Oryza sativa mRNA for mitochondrial orf155, strain IR 62829 A. OS mitochondrion Oryza sativa (rice) OC Oryza sativa RN [1] RL Unpublished FT Full length CDS FT GENE : FT NOTE : orf 155 FT LOCUS_TAG : FT PROTEIN_ID : CAA76111.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : FT REGIONS : 193 - 660 FT DIRECTIONS : positive FT EDITING : 20 L(Ctc) -> F(Ttc) FT EDITING : 41 L(ctC) -> L(ctT) FT EDITING : 67 S(tCg) -> L(tTg) FT EDITING : 73 T(acC) -> T(acT) FT EDITING : 75 L(ctC) -> L(ctT) FT EDITING : 133 S(tcC) -> S(tcT) FT EDITING : 148 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 468 NT; CD 1 atgcctcaac ttgataaatt gacttatttc tcacaattct tctggttatg CD 51 ccttttcCtc tttagttttt atattctctt attaaataat aataatggaa CD 101 tacttggaat tagcagaatt ctCaaactac ggaaccaact gctttcgcac CD 151 cgggggaaca agatccgttt caaggaccct aagaatttgg aagatatctC CD 201 gagaaaaggt tttagcacCg gtctCtcata tatgtactcc agtttatccg CD 251 aagtatccca atggtgtaag accgtcgact atttgggaaa aaggaggaaa CD 301 atcactctga tctcagattt cggagaaata agtggctcac gaggaatgga CD 351 gagacagatt ctctatttga tctcgaagtc ctcatataac acttcttcCa CD 401 gtcggatcac ttgttggaaa aaaataatgc tcacacatgt tcCacacggg CD 451 caaggaagca taatctaa FT EDITED CDNA CD 1 atgcctcaac ttgataaatt gacttatttc tcacaattct tctggttatg CD 51 ccttttcTtc tttagttttt atattctctt attaaataat aataatggaa CD 101 tacttggaat tagcagaatt ctTaaactac ggaaccaact gctttcgcac CD 151 cgggggaaca agatccgttt caaggaccct aagaatttgg aagatatctT CD 201 gagaaaaggt tttagcacTg gtctTtcata tatgtactcc agtttatccg CD 251 aagtatccca atggtgtaag accgtcgact atttgggaaa aaggaggaaa CD 301 atcactctga tctcagattt cggagaaata agtggctcac gaggaatgga CD 351 gagacagatt ctctatttga tctcgaagtc ctcatataac acttcttcTa CD 401 gtcggatcac ttgttggaaa aaaataatgc tcacacatgt tcTacacggg CD 451 caaggaagca taatctaa SQ SEQUENCE 156 AA; MPQLDKLTYF SQFFWLCLFF FSFYILLLNN NNGILGISRI LKLRNQLLSH RGNKIRFKDP KNLEDILRKG FSTGLSYMYS SLSEVSQWCK TVDYLGKRRK ITLISDFGEI SGSRGMERQI LYLISKSSYN TSSSRITCWK KIMLTHVLHG QGSII* // ID Y17813_1 STANDARD; PRT; 88 AA. AC Y17813; DT Tue Jul 21 07:06:45 2009 DE Isoetes lacustris mitochondrial nad2 gene. OS mitochondrion Isoetes lacustris OC Isoetes lacustris RN [1] RL RNA 4 (12), 1599-1609 (1998) RL PUBMED 9848656 FT N-terminal not determined FT C-terminal not determined FT GENE : nad2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA76867.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 40/2 FT EDITING : 1 P(cCC) -> L(cTT) FT EDITING : 4 S(tCa) -> L(tTa) FT EDITING : 5 R(Cgt) -> C(Tgt) FT EDITING : 6 S(tCt) -> F(tTt) FT EDITING : 7 H(Cat) -> Y(Tat) FT EDITING : 12 P(Cca) -> S(Tca) FT EDITING : 16 P(Cct) -> S(Tct) FT EDITING : 24 S(tCa) -> L(tTa) FT EDITING : 27 S(tCt) -> F(tTt) FT EDITING : 34 P(Ccc) -> S(Tcc) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 40 G(ggC) -> G(ggT) FT EDITING : 41 R(Cgt) -> C(Tgt) FT EDITING : 42 P(Ccc) -> S(Tcc) FT EDITING : 43 T(aCg) -> M(aTg) FT EDITING : 53 S(tCt) -> F(tTt) FT EDITING : 56 S(tCg) -> L(tTg) FT EDITING : 71 *(Taa) -> Q(Caa) FT EDITING : 77 P(cCg) -> L(cTg) FT EDITING : 86 L(Ctt) -> F(Ttt) FT EDITING : 87 P(CcC) -> S(TcT) FT CODON_START : 1 CL CDNALEN 264 NT; CD 1 cCCcagagtt CaCgttCtCa tgtgatcgca gcaCcaagaa gagacCctga CD 51 attttccacg gaagccggct CaaaatattC tattttaggc gcattctccC CD 101 ccggaatatC attgtttggC CgtCccaCga tctatggatt gactggagtg CD 151 actgactCtg aggaatCggc taagattttc gctggatatg aaatcacttt CD 201 gttcagtgct Taatctagtg gtctctttcC ggggatctta tttatagccg CD 251 taggtCttCc Cctt FT EDITED CDNA CD 1 cTTcagagtt TaTgttTtTa tgtgatcgca gcaTcaagaa gagacTctga CD 51 attttccacg gaagccggct TaaaatattT tattttaggc gcattctccT CD 101 ccggaatatT attgtttggT TgtTccaTga tctatggatt gactggagtg CD 151 actgactTtg aggaatTggc taagattttc gctggatatg aaatcacttt CD 201 gttcagtgct Caatctagtg gtctctttcT ggggatctta tttatagccg CD 251 taggtTttTc Tctt SQ SEQUENCE 88 AA; LQSLCFYVIA ASRRDSEFST EAGLKYFILG AFSSGILLFG CSMIYGLTGV TDFEELAKIF AGYEITLFSA QSSGLFLGIL FIAVGFSL // ID Y17814_1 STANDARD; PRT; 92 AA. AC Y17814; DT Tue Jul 21 07:06:45 2009 DE Isoetes lacustris mitochondrial nad5 gene. OS mitochondrion Isoetes lacustris OC Isoetes lacustris RN [1] RL RNA 4 (12), 1599-1609 (1998) RL PUBMED 9848656 FT C-terminal not determined FT GENE : nad5 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA76868.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 436 - 711 FT DIRECTIONS : positive FT EDITING : 2 S(tCC) -> F(tTT) FT EDITING : 3 R(Cgg) -> W(Tgg) FT EDITING : 4 A(gcT) -> A(gcC) FT EDITING : 7 P(cCt) -> L(cTt) FT EDITING : 8 F(ttC) -> F(ttT) FT EDITING : 12 *(Taa) -> Q(Caa) FT EDITING : 21 T(acC) -> T(acT) FT EDITING : 25 P(cCa) -> L(cTa) FT EDITING : 30 S(tCc) -> F(tTc) FT EDITING : 33 P(cCa) -> L(cTa) FT EDITING : 36 P(CCt) -> F(TTt) FT EDITING : 52 S(tCg) -> L(tTg) FT EDITING : 61 H(Cat) -> Y(Tat) FT EDITING : 63 S(tCc) -> F(tTc) FT EDITING : 68 R(Cgg) -> W(Tgg) FT EDITING : 85 L(Ctc) -> F(Ttc) FT EDITING : 87 H(Cat) -> Y(Tat) FT EDITING : 91 S(tCt) -> F(tTt) FT CODON_START : 3 CL CDNALEN 276 NT; CD 1 ccaattCCCg ggcTaattcc cCtttCatac tacccTaagc cgaatccgag CD 51 tttgctactc caacCattat caaacCaata cctattttgt CcagtactcC CD 101 aggtgctCCt gcggcgtata acgtcaatct cgtagcaaag agatccattt CD 151 tcgcttCgaa aactggtttg ggtaatcaac tcCatcgctC cttgaacaag CD 201 cgcCggtatt tcgataaggt ttcgaatgac tttctagtgg gatggctttt CD 251 gcgtCtcggc Catgaagtat catCta FT EDITED CDNA CD 1 ccaattTTTg ggcCaattcc cTtttTatac tacccCaagc cgaatccgag CD 51 tttgctactc caacTattat caaacTaata cctattttgt TcagtactcT CD 101 aggtgctTTt gcggcgtata acgtcaatct cgtagcaaag agatccattt CD 151 tcgcttTgaa aactggtttg ggtaatcaac tcTatcgctT cttgaacaag CD 201 cgcTggtatt tcgataaggt ttcgaatgac tttctagtgg gatggctttt CD 251 gcgtTtcggc Tatgaagtat catTta SQ SEQUENCE 92 AA; NFWANSLFIL PQAESEFATP TIIKLIPILF STLGAFAAYN VNLVAKRSIF ALKTGLGNQL YRFLNKRWYF DKVSNDFLVG WLLRFGYEVS FX // ID Y17815_1 STANDARD; PRT; 27 AA. AC Y17815; DT Tue Jul 21 07:06:45 2009 DE Osmunda regalis mitochondrial nad1 gene. OS mitochondrion Osmunda regalis OC Osmunda regalis RN [1] RL RNA 4 (12), 1599-1609 (1998) RL PUBMED 9848656 FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA76869.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 17/0 FT EDITING : 9 V(gtC) -> V(gtT) FT EDITING : 24 S(tCt) -> F(tTt) FT EDITING : 26 P(Cca) -> S(Tca) FT CODON_START : 1 CL CDNALEN 81 NT; CD 1 ctaccagaag cagaagctga attagtCgcg ggctataatg tggaatattc CD 51 ctcaatgggg tttgctcttt CttttCcagg g FT EDITED CDNA CD 1 ctaccagaag cagaagctga attagtTgcg ggctataatg tggaatattc CD 51 ctcaatgggg tttgctcttt TttttTcagg g SQ SEQUENCE 27 AA; LPEAEAELVA GYNVEYSSMG FALFFSG // ID Y17972_1 STANDARD; PRT; 102 AA. AC Y17972; DT Tue Jul 21 07:06:45 2009 DE Asplenium nidus mitochondrial nad1 gene. OS mitochondrion Asplenium nidus (bird's-nest fern) OC Asplenium nidus RN [1] RL RNA 4 (12), 1599-1609 (1998) RL PUBMED 9848656 FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA76981.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 75 - 382 FT DIRECTIONS : positive FT EDITING : 6 S(tCa) -> L(tTa) FT EDITING : 10 *(Tga) -> R(Cga) FT EDITING : 14 *(Taa) -> Q(Caa) FT EDITING : 45 *(Taa) -> Q(Caa) FT EDITING : 47 *(Tag) -> Q(Cag) FT CODON_START : 3 CL CDNALEN 308 NT; CD 1 attccaaata tgctttttCa ggagtatcaT gatttgctgt cTaaatggtt CD 51 ttgtacgaag tatctattgg tcccatcatc attactgcat caacccgtgt CD 101 aggtcctcgc aatttcagtg agattgtcat agcgTaagag Tagatatggt CD 151 tccgcattct cttgttcctc gtattgattt tgtttttcat ctcccgccta CD 201 gcagaaacta atcgggctct gtctgatcca ccagaagcag aggctgaatt CD 251 ggtcgcgggc cataatgcgg aatatcttct aatgggattt gctctttttc CD 301 tttcagga FT EDITED CDNA CD 1 attccaaata tgctttttTa ggagtatcaC gatttgctgt cCaaatggtt CD 51 ttgtacgaag tatctattgg tcccatcatc attactgcat caacccgtgt CD 101 aggtcctcgc aatttcagtg agattgtcat agcgCaagag Cagatatggt CD 151 tccgcattct cttgttcctc gtattgattt tgtttttcat ctcccgccta CD 201 gcagaaacta atcgggctct gtctgatcca ccagaagcag aggctgaatt CD 251 ggtcgcgggc cataatgcgg aatatcttct aatgggattt gctctttttc CD 301 tttcagga SQ SEQUENCE 102 AA; SKYAFLGVSR FAVQMVLYEV SIGPIIITAS TRVGPRNFSE IVIAQEQIWF RILLFLVLIL FFISRLAETN RALSDPPEAE AELVAGHNAE YLLMGFALFL SG // ID Y18169_1 STANDARD; PRT; 249 AA. AC Y18169; DT Tue Jul 21 07:06:45 2009 DE Pisum sativum mitochondrial ccb248 gene and partial rps7 gene. OS mitochondrion Pisum sativum (pea) OC Pisum sativum RN [1] RL Plant Mol. Biol. 40 (1), 91-97 (1999) RL PUBMED 10394948 FT Full length CDS FT GENE : ccb248 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB43024.1 FT PROTEIN_NAME : cytochrome c biogenesis protein FT EVIDENCE : FT EXCEPTION : FT REGIONS : 406 - 1152 FT DIRECTIONS : positive FT EDITING : 17 T(acC) -> T(acT) FT EDITING : 28 R(Cgg) -> W(Tgg) FT EDITING : 30 F(ttC) -> F(ttT) FT EDITING : 37 H(Cat) -> Y(Tat) FT EDITING : 41 R(Cgg) -> W(Tgg) FT EDITING : 47 L(Ctt) -> F(Ttt) FT EDITING : 62 A(gCg) -> V(gTg) FT EDITING : 64 R(Cgg) -> W(Tgg) FT EDITING : 80 F(ttC) -> F(ttT) FT EDITING : 86 P(ccC) -> P(ccT) FT EDITING : 96 T(aCa) -> I(aTa) FT EDITING : 113 R(Cgg) -> W(Tgg) FT EDITING : 134 S(tCg) -> L(tTg) FT EDITING : 143 R(Cgt) -> C(Tgt) FT EDITING : 148 P(Cct) -> S(Tct) FT EDITING : 151 P(cCg) -> L(cTg) FT EDITING : 153 P(Cct) -> S(Tct) FT EDITING : 155 S(tCa) -> L(tTa) FT EDITING : 157 R(Cgt) -> C(Tgt) FT EDITING : 158 A(gCt) -> V(gTt) FT EDITING : 160 P(cCg) -> L(cTg) FT EDITING : 168 S(tCt) -> F(tTt) FT EDITING : 185 S(tCt) -> F(tTt) FT EDITING : 192 P(Cct) -> S(Tct) FT EDITING : 194 P(cCc) -> L(cTc) FT EDITING : 205 P(cCc) -> L(cTc) FT EDITING : 207 S(tCa) -> L(tTa) FT EDITING : 209 R(Cgt) -> C(Tgt) FT EDITING : 210 I(atC) -> I(atT) FT EDITING : 219 P(cCt) -> L(cTt) FT EDITING : 224 P(cCc) -> L(cTc) FT EDITING : 227 P(Cct) -> S(Tct) FT CODON_START : 1 CL CDNALEN 747 NT; CD 1 atgtcccttt cgttatcgtt attacaacct tcttttttga tgtcaaagac CD 51 Cagaagctgt gcgctaattc tcattggatc tCggttgttC ttaacagcga CD 101 tggctattCa tttaagtctt Cgggtagcac cattagatCt tcaacaaggt CD 151 ggaaattctc gtattcttta tgtacatgtt cctgCggctC ggatgagtat CD 201 tcttgtttat atcgctacgg ctataaacac tttcttattC ctattaacaa CD 251 aacatccCct ttttcttcgc tcttccggaa ccggtaCaga aatgggtgct CD 301 ttttttacgt tgtttacctt agttactggg gggtttCggg gaagacctat CD 351 gtggggcacc ttttgggtgt gggatgctcg tttaacctct gtattcatct CD 401 Cgtttctgat ttacctgggt gcactgCgtt ttcaaaagct tCctgtcgaa CD 451 cCggctCcta tttCaatcCg tgCtggacCg atcgatatac caataataaa CD 501 gtCttcagtc aactggtgga atactttgca tcaacctggg agcattagcc CD 551 gatCtggtac atcaatacat gttCctatgc Ccattccaat cttgtctaac CD 601 tttgctaact tccCcctctC aaccCgtatC ttgtttgttc tggaaacacg CD 651 tcttcCtatt ctatcttttc CcgaatctCc tttaaggtat gaaatagaag CD 701 ctcgagaagg aatagcaaaa cctagtttac ttcccagctc aaactga FT EDITED CDNA CD 1 atgtcccttt cgttatcgtt attacaacct tcttttttga tgtcaaagac CD 51 Tagaagctgt gcgctaattc tcattggatc tTggttgttT ttaacagcga CD 101 tggctattTa tttaagtctt Tgggtagcac cattagatTt tcaacaaggt CD 151 ggaaattctc gtattcttta tgtacatgtt cctgTggctT ggatgagtat CD 201 tcttgtttat atcgctacgg ctataaacac tttcttattT ctattaacaa CD 251 aacatccTct ttttcttcgc tcttccggaa ccggtaTaga aatgggtgct CD 301 ttttttacgt tgtttacctt agttactggg gggtttTggg gaagacctat CD 351 gtggggcacc ttttgggtgt gggatgctcg tttaacctct gtattcatct CD 401 Tgtttctgat ttacctgggt gcactgTgtt ttcaaaagct tTctgtcgaa CD 451 cTggctTcta tttTaatcTg tgTtggacTg atcgatatac caataataaa CD 501 gtTttcagtc aactggtgga atactttgca tcaacctggg agcattagcc CD 551 gatTtggtac atcaatacat gttTctatgc Tcattccaat cttgtctaac CD 601 tttgctaact tccTcctctT aaccTgtatT ttgtttgttc tggaaacacg CD 651 tcttcTtatt ctatcttttc TcgaatctTc tttaaggtat gaaatagaag CD 701 ctcgagaagg aatagcaaaa cctagtttac ttcccagctc aaactga SQ SEQUENCE 249 AA; MSLSLSLLQP SFLMSKTRSC ALILIGSWLF LTAMAIYLSL WVAPLDFQQG GNSRILYVHV PVAWMSILVY IATAINTFLF LLTKHPLFLR SSGTGIEMGA FFTLFTLVTG GFWGRPMWGT FWVWDARLTS VFILFLIYLG ALCFQKLSVE LASILICVGL IDIPIIKFSV NWWNTLHQPG SISRFGTSIH VSMLIPILSN FANFLLLTCI LFVLETRLLI LSFLESSLRY EIEAREGIAK PSLLPSSN* // ID Z80856_1 STANDARD; PRT; 148 AA. AC Z80856; DT Tue Jul 21 07:06:47 2009 DE A.calamus chloroplast ndhB mRNA. OS chloroplast Acorus calamus OC Acorus calamus RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02562.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 4 P(cCa) -> L(cTa) FT EDITING : 44 H(Cat) -> Y(Tat) FT EDITING : 125 S(tCa) -> L(tTa) FT EDITING : 127 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 tttgtagctc Cagaatgttt tagtttatgc tcctacctct tatctggata CD 51 taccaagaga gatctacggt ctaatgaggc tactatgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttC atggtttctc ttggctatat CD 151 ggtttatccg ggggggagat cgagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ccccgggaat ttcaattgcg cttatattca CD 251 tcactgtagg aattgggttc aagctttccc tagccccttt tcatcaatgg CD 301 actcctgacg tatacgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttCagcttC agccacgcga attttcgata CD 401 ttccttttta tttctcatca aacgaatggc atcttcttct ggaa FT EDITED CDNA CD 1 tttgtagctc Tagaatgttt tagtttatgc tcctacctct tatctggata CD 51 taccaagaga gatctacggt ctaatgaggc tactatgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttT atggtttctc ttggctatat CD 151 ggtttatccg ggggggagat cgagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ccccgggaat ttcaattgcg cttatattca CD 251 tcactgtagg aattgggttc aagctttccc tagccccttt tcatcaatgg CD 301 actcctgacg tatacgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttTagcttT agccacgcga attttcgata CD 401 ttccttttta tttctcatca aacgaatggc atcttcttct ggaa SQ SEQUENCE 148 AA; FVALECFSLC SYLLSGYTKR DLRSNEATMK YLLMGGASSS ILVYGFSWLY GLSGGEIELQ EIVNGLINTQ MYNSPGISIA LIFITVGIGF KLSLAPFHQW TPDVYEGSPT PVVAFLSVTS KVAALALATR IFDIPFYFSS NEWHLLLE // ID Z80857_1 STANDARD; PRT; 148 AA. AC Z80857; DT Tue Jul 21 07:06:47 2009 DE C.demersum chloroplast ndhB mRNA. OS chloroplast Ceratophyllum demersum OC Ceratophyllum demersum RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02563.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 4 P(cCa) -> L(cTa) FT EDITING : 29 T(aCg) -> M(aTg) FT EDITING : 44 H(Cat) -> Y(Tat) FT EDITING : 94 P(cCa) -> L(cTa) FT EDITING : 125 S(tCa) -> L(tTa) FT EDITING : 127 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 tttgtagctc Cagaatgttt cagtttatgc tcctacctat tatctggata CD 51 taccaagaga gatctacggt ctaatgaggc tactaCgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttC atggtttctc ttggctatat CD 151 ggttcatccg ggggggagat tgagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ccccaggaat ttcaattgcg cttatattca CD 251 tcactgtagg aattgggttc aagctttccc Cagccccttt tcatcaatgg CD 301 actcctgacg tatacgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttCagcttC agccacgcga attttcgata CD 401 ttccttttta tttctcatca aacgaatggc atcttcttct ggaa FT EDITED CDNA CD 1 tttgtagctc Tagaatgttt cagtttatgc tcctacctat tatctggata CD 51 taccaagaga gatctacggt ctaatgaggc tactaTgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttT atggtttctc ttggctatat CD 151 ggttcatccg ggggggagat tgagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ccccaggaat ttcaattgcg cttatattca CD 251 tcactgtagg aattgggttc aagctttccc Tagccccttt tcatcaatgg CD 301 actcctgacg tatacgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttTagcttT agccacgcga attttcgata CD 401 ttccttttta tttctcatca aacgaatggc atcttcttct ggaa SQ SEQUENCE 148 AA; FVALECFSLC SYLLSGYTKR DLRSNEATMK YLLMGGASSS ILVYGFSWLY GSSGGEIELQ EIVNGLINTQ MYNSPGISIA LIFITVGIGF KLSLAPFHQW TPDVYEGSPT PVVAFLSVTS KVAALALATR IFDIPFYFSS NEWHLLLE // ID Z80858_1 STANDARD; PRT; 148 AA. AC Z80858; DT Tue Jul 21 07:06:47 2009 DE C.japonica chloroplast ndhB mRNA. OS chloroplast Cryptomeria japonica (Japanese cedar) OC Cryptomeria japonica RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02564.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 125 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 ttagtatctt tagaatgttt aagtctatgt tcttatctat tatctggata CD 51 taccaaaaga gatctacggt ctaatgaggc tattatgaaa tatttactta CD 101 tgggtggaac aagttcttcc attcttgctt atggcctttc ttggctatat CD 151 ggtctatctg gaggagagat tgaacttcaa gaaatagcca atggtcttat CD 201 aaatacacaa atgtataact ctccaggaat ttggattgca cttctatcta CD 251 taacggtagg aattgcattc aagctttccc tagttccttt tcatcaatgg CD 301 acccccgatg tatatgaagg atcccccact ccagtcgttg cttttatttc CD 351 tgttatttca aaagtagctg cttCagcttt agccactaga atttttgata CD 401 ttatttttta tttctcattg aacgaatggc atcttctttt ggaa FT EDITED CDNA CD 1 ttagtatctt tagaatgttt aagtctatgt tcttatctat tatctggata CD 51 taccaaaaga gatctacggt ctaatgaggc tattatgaaa tatttactta CD 101 tgggtggaac aagttcttcc attcttgctt atggcctttc ttggctatat CD 151 ggtctatctg gaggagagat tgaacttcaa gaaatagcca atggtcttat CD 201 aaatacacaa atgtataact ctccaggaat ttggattgca cttctatcta CD 251 taacggtagg aattgcattc aagctttccc tagttccttt tcatcaatgg CD 301 acccccgatg tatatgaagg atcccccact ccagtcgttg cttttatttc CD 351 tgttatttca aaagtagctg cttTagcttt agccactaga atttttgata CD 401 ttatttttta tttctcattg aacgaatggc atcttctttt ggaa SQ SEQUENCE 148 AA; LVSLECLSLC SYLLSGYTKR DLRSNEAIMK YLLMGGTSSS ILAYGLSWLY GLSGGEIELQ EIANGLINTQ MYNSPGIWIA LLSITVGIAF KLSLVPFHQW TPDVYEGSPT PVVAFISVIS KVAALALATR IFDIIFYFSL NEWHLLLE // ID Z80859_1 STANDARD; PRT; 148 AA. AC Z80859; DT Tue Jul 21 07:06:47 2009 DE D.carota chloroplast ndhB mRNA. OS chloroplast Daucus carota (carrot) OC Daucus carota RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02565.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 4 P(cCa) -> L(cTa) FT EDITING : 44 H(Cat) -> Y(Tat) FT EDITING : 52 S(tCa) -> L(tTa) FT EDITING : 94 P(cCa) -> L(cTa) FT EDITING : 97 S(tCt) -> F(tTt) FT EDITING : 125 S(tCa) -> L(tTa) FT EDITING : 127 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 tttgtagctc Cagaatgttt cagtttatgc tcctacctat tatctggata CD 51 tacgaagaaa gatgtacggt ctaatgaggc tactatgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttC atggtttctc ttggctatat CD 151 ggttCatccg ggggagagat cgagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ccccaggaat ttcaattgcg cttatattca CD 251 tcactgtagg aattggattc aagctttccc CagccccttC tcatcaatgg CD 301 actcctgacg tatacgaagg atcccccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttCagcttC agccactcga attttcgata CD 401 ttccttttta tttctcatca aacgaatggc atcttcttct ggaa FT EDITED CDNA CD 1 tttgtagctc Tagaatgttt cagtttatgc tcctacctat tatctggata CD 51 tacgaagaaa gatgtacggt ctaatgaggc tactatgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttT atggtttctc ttggctatat CD 151 ggttTatccg ggggagagat cgagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ccccaggaat ttcaattgcg cttatattca CD 251 tcactgtagg aattggattc aagctttccc TagccccttT tcatcaatgg CD 301 actcctgacg tatacgaagg atcccccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttTagcttT agccactcga attttcgata CD 401 ttccttttta tttctcatca aacgaatggc atcttcttct ggaa SQ SEQUENCE 148 AA; FVALECFSLC SYLLSGYTKK DVRSNEATMK YLLMGGASSS ILVYGFSWLY GLSGGEIELQ EIVNGLINTQ MYNSPGISIA LIFITVGIGF KLSLAPFHQW TPDVYEGSPT PVVAFLSVTS KVAALALATR IFDIPFYFSS NEWHLLLE // ID Z80860_1 STANDARD; PRT; 148 AA. AC Z80860; DT Tue Jul 21 07:06:47 2009 DE D.edule chloroplast ndhB mRNA. OS chloroplast Dioon edule OC Dioon edule RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02566.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 83 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 ttcgtagctc tggaatattt cagcttatgt tcttatctat tatctggata CD 51 taccaagaga gatgtacggt ctaatgaggc tactatgaaa tatttactta CD 101 tgggtggggc aagctcttct attctggttt atggtttttc ttggctatac CD 151 ggtctatccg ggggagagat tgagcttcaa gaggtagtaa atggtctcat CD 201 aaatacacaa atgtataact ccccaggaat tttcattgcg ctcatatCca CD 251 taactgtagg aattggattc aagctttctc tagtcccttt tcatcaatgg CD 301 acccctgacg tatatgaagg atctcccacc ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg ctttagcttt agccactcga attttcgata CD 401 ttattttcta cttttcatcg aacgaatggc atcttctttt ggaa FT EDITED CDNA CD 1 ttcgtagctc tggaatattt cagcttatgt tcttatctat tatctggata CD 51 taccaagaga gatgtacggt ctaatgaggc tactatgaaa tatttactta CD 101 tgggtggggc aagctcttct attctggttt atggtttttc ttggctatac CD 151 ggtctatccg ggggagagat tgagcttcaa gaggtagtaa atggtctcat CD 201 aaatacacaa atgtataact ccccaggaat tttcattgcg ctcatatTca CD 251 taactgtagg aattggattc aagctttctc tagtcccttt tcatcaatgg CD 301 acccctgacg tatatgaagg atctcccacc ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg ctttagcttt agccactcga attttcgata CD 401 ttattttcta cttttcatcg aacgaatggc atcttctttt ggaa SQ SEQUENCE 148 AA; FVALEYFSLC SYLLSGYTKR DVRSNEATMK YLLMGGASSS ILVYGFSWLY GLSGGEIELQ EVVNGLINTQ MYNSPGIFIA LIFITVGIGF KLSLVPFHQW TPDVYEGSPT PVVAFLSVTS KVAALALATR IFDIIFYFSS NEWHLLLE // ID Z80861_1 STANDARD; PRT; 148 AA. AC Z80861; DT Tue Jul 21 07:06:47 2009 DE G.biloba chloroplast ndhB mRNA. OS chloroplast Ginkgo biloba (maidenhair tree) OC Ginkgo biloba RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02567.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 1 S(tCt) -> F(tTt) FT EDITING : 46 L(Ctt) -> F(Ttt) FT EDITING : 83 S(tCc) -> F(tTc) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 tCtgtagctt tagaatgttt cagtttatgt tcttatctat tatctggata CD 51 taccaagaga gatctacggt ctaatgaggc tactatgaaa tatttactta CD 101 tgggtgggac aagctcttct attctggttt atggtCtttc ttggctatat CD 151 ggtctatccg ggggagagat tgagcttcaa gaaatagtaa atggtcttat CD 201 caatacacaa atgtataact ctccgggaat tttgattgcg cttatatCca CD 251 taactgtagg aattggattc aagctttctc tagtcccttt tcatcaatgg CD 301 acccctgacg tatatgaagg atctcccact ccagtcgttg cttttctctc CD 351 tgttacttcg aaagtagctg ctttagcttt agccactcga attttcgata CD 401 ttcttttcta tttttcatcg aacgaatggc atcttctttt ggaa FT EDITED CDNA CD 1 tTtgtagctt tagaatgttt cagtttatgt tcttatctat tatctggata CD 51 taccaagaga gatctacggt ctaatgaggc tactatgaaa tatttactta CD 101 tgggtgggac aagctcttct attctggttt atggtTtttc ttggctatat CD 151 ggtctatccg ggggagagat tgagcttcaa gaaatagtaa atggtcttat CD 201 caatacacaa atgtataact ctccgggaat tttgattgcg cttatatTca CD 251 taactgtagg aattggattc aagctttctc tagtcccttt tcatcaatgg CD 301 acccctgacg tatatgaagg atctcccact ccagtcgttg cttttctctc CD 351 tgttacttcg aaagtagctg ctttagcttt agccactcga attttcgata CD 401 ttcttttcta tttttcatcg aacgaatggc atcttctttt ggaa SQ SEQUENCE 148 AA; FVALECFSLC SYLLSGYTKR DLRSNEATMK YLLMGGTSSS ILVYGFSWLY GLSGGEIELQ EIVNGLINTQ MYNSPGILIA LIFITVGIGF KLSLVPFHQW TPDVYEGSPT PVVAFLSVTS KVAALALATR IFDILFYFSS NEWHLLLE // ID Z80862_1 STANDARD; PRT; 148 AA. AC Z80862; DT Tue Jul 21 07:06:47 2009 DE H.mollis chloroplast ndhB mRNA. OS chloroplast Hamamelis mollis (Chinese witch hazel) OC Hamamelis mollis RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02568.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 4 P(cCa) -> L(cTa) FT EDITING : 29 T(aCg) -> M(aTg) FT EDITING : 44 H(Cat) -> Y(Tat) FT EDITING : 52 S(tCa) -> L(tTa) FT EDITING : 94 P(cCa) -> L(cTa) FT EDITING : 97 S(tCt) -> F(tTt) FT EDITING : 125 S(tCa) -> L(tTa) FT EDITING : 127 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 tttgtagctc Cagaatgttt cagtttatgc tcctacctat tatctggata CD 51 taccaagaaa gatgtacggt ctaatgaggc tactaCgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttC atggtttctc ttggctatat CD 151 ggttCatccg ggggagagat cgagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ccccaggaat ttcaattgcg cttatattca CD 251 tcactgtagg aattgggttc aagctttccc CagccccttC tcatcaatgg CD 301 actcctgacg tatacaaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttCagcttC agccactcga attttcgata CD 401 ttccttttta tttctcatca aacgaatggc atcttcttct ggaa FT EDITED CDNA CD 1 tttgtagctc Tagaatgttt cagtttatgc tcctacctat tatctggata CD 51 taccaagaaa gatgtacggt ctaatgaggc tactaTgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttT atggtttctc ttggctatat CD 151 ggttTatccg ggggagagat cgagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ccccaggaat ttcaattgcg cttatattca CD 251 tcactgtagg aattgggttc aagctttccc TagccccttT tcatcaatgg CD 301 actcctgacg tatacaaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttTagcttT agccactcga attttcgata CD 401 ttccttttta tttctcatca aacgaatggc atcttcttct ggaa SQ SEQUENCE 148 AA; FVALECFSLC SYLLSGYTKK DVRSNEATMK YLLMGGASSS ILVYGFSWLY GLSGGEIELQ EIVNGLINTQ MYNSPGISIA LIFITVGIGF KLSLAPFHQW TPDVYKGSPT PVVAFLSVTS KVAALALATR IFDIPFYFSS NEWHLLLE // ID Z80864_1 STANDARD; PRT; 148 AA. AC Z80864; DT Tue Jul 21 07:06:47 2009 DE M.grandiflora chloroplast ndhB mRNA. OS chloroplast Magnolia grandiflora OC Magnolia grandiflora RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02570.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 4 P(cCa) -> L(cTa) FT EDITING : 29 T(aCg) -> M(aTg) FT EDITING : 44 H(Cat) -> Y(Tat) FT EDITING : 52 S(tCa) -> L(tTa) FT EDITING : 94 P(cCa) -> L(cTa) FT EDITING : 97 S(tCt) -> F(tTt) FT EDITING : 125 S(tCa) -> L(tTa) FT EDITING : 127 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 tttgtagctc Cagaatgttt cagtttatgc tcctacctat tatctggata CD 51 taccaagaga gatctacggt ctaatgaggc tactaCgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttC atggtttctc ttggctatat CD 151 ggttCatccg ggggagagat cgagcttcaa gaaatagtga atggtcttat CD 201 caagacacaa atgtataact ccccaggaat ttcaattgcg cttatattca CD 251 tcactgtagg aattgggttc aagctttccc CagccccttC tcatcaatgg CD 301 actcctgacg tatacgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttCagcttC agccactcga attttcgata CD 401 ttccttttta tttctcatca aacgaatggc atcttcttct ggaa FT EDITED CDNA CD 1 tttgtagctc Tagaatgttt cagtttatgc tcctacctat tatctggata CD 51 taccaagaga gatctacggt ctaatgaggc tactaTgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttT atggtttctc ttggctatat CD 151 ggttTatccg ggggagagat cgagcttcaa gaaatagtga atggtcttat CD 201 caagacacaa atgtataact ccccaggaat ttcaattgcg cttatattca CD 251 tcactgtagg aattgggttc aagctttccc TagccccttT tcatcaatgg CD 301 actcctgacg tatacgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttTagcttT agccactcga attttcgata CD 401 ttccttttta tttctcatca aacgaatggc atcttcttct ggaa SQ SEQUENCE 148 AA; FVALECFSLC SYLLSGYTKR DLRSNEATMK YLLMGGASSS ILVYGFSWLY GLSGGEIELQ EIVNGLIKTQ MYNSPGISIA LIFITVGIGF KLSLAPFHQW TPDVYEGSPT PVVAFLSVTS KVAALALATR IFDIPFYFSS NEWHLLLE // ID Z80865_1 STANDARD; PRT; 148 AA. AC Z80865; DT Tue Jul 21 07:06:47 2009 DE N.pseudonarcissus chloroplast ndhB mRNA. OS chloroplast Narcissus pseudonarcissus (daffodil) OC Narcissus pseudonarcissus RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02571.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 4 P(cCa) -> L(cTa) FT EDITING : 29 T(aCg) -> M(aTg) FT EDITING : 44 H(Cat) -> Y(Tat) FT EDITING : 52 S(tCa) -> L(tTa) FT EDITING : 83 S(tCc) -> F(tTc) FT EDITING : 94 P(cCa) -> L(cTa) FT EDITING : 125 S(tCa) -> L(tTa) FT EDITING : 127 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 tttgtagctc Cagaatgttt cagtttatgt tcctacctat tatctggata CD 51 taccaagaga gatgtacggt ctaatgaggc tactaCgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttC atggtttctc ttggctatat CD 151 ggttCatctg ggggggagat cgagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ccccaggaat ttcaattgcg cttatatCca CD 251 tcactgtagg aattggattc aagctttccc Cagccccttt tcatcaatgg CD 301 actcctgacg tatacgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttCagcttC agccacgcga attttcgata CD 401 ttccttttta tttctcatca aacgaatggc atcttctttt ggaa FT EDITED CDNA CD 1 tttgtagctc Tagaatgttt cagtttatgt tcctacctat tatctggata CD 51 taccaagaga gatgtacggt ctaatgaggc tactaTgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttT atggtttctc ttggctatat CD 151 ggttTatctg ggggggagat cgagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ccccaggaat ttcaattgcg cttatatTca CD 251 tcactgtagg aattggattc aagctttccc Tagccccttt tcatcaatgg CD 301 actcctgacg tatacgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttTagcttT agccacgcga attttcgata CD 401 ttccttttta tttctcatca aacgaatggc atcttctttt ggaa SQ SEQUENCE 148 AA; FVALECFSLC SYLLSGYTKR DVRSNEATMK YLLMGGASSS ILVYGFSWLY GLSGGEIELQ EIVNGLINTQ MYNSPGISIA LIFITVGIGF KLSLAPFHQW TPDVYEGSPT PVVAFLSVTS KVAALALATR IFDIPFYFSS NEWHLLLE // ID Z80866_1 STANDARD; PRT; 148 AA. AC Z80866; DT Tue Jul 21 07:06:47 2009 DE N.caerula chloroplast ndhB mRNA. OS chloroplast Nymphaea caerulea OC Nymphaea caerulea RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02572.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 4 P(cCa) -> L(cTa) FT EDITING : 29 T(aCg) -> M(aTg) FT EDITING : 52 S(tCa) -> L(tTa) FT EDITING : 83 S(tCc) -> F(tTc) FT EDITING : 94 P(cCa) -> L(cTa) FT EDITING : 125 S(tCa) -> L(tTa) FT EDITING : 127 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 tttgtagctc Cagaatgttt cagtttatgc tcctacctat tatctggata CD 51 taccaagaga gatctacggt ctaatgaggc tactaCgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttt atggtttctc ttggctatat CD 151 ggttCatccg ggggagagat cgagcttcaa gaaatagtga acggtcttat CD 201 caatacacaa atgtataact ccccaggaat ttcgattgcg cttatatCca CD 251 tcactgtagg aattgggttc aagctttccc Cagccccttt tcatcaatgg CD 301 actcctgacg tatacgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttCagcttC agccactcga attttcgata CD 401 ttcctttcta tttctcatcg aacgaatggc atcttcttct ggaa FT EDITED CDNA CD 1 tttgtagctc Tagaatgttt cagtttatgc tcctacctat tatctggata CD 51 taccaagaga gatctacggt ctaatgaggc tactaTgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttt atggtttctc ttggctatat CD 151 ggttTatccg ggggagagat cgagcttcaa gaaatagtga acggtcttat CD 201 caatacacaa atgtataact ccccaggaat ttcgattgcg cttatatTca CD 251 tcactgtagg aattgggttc aagctttccc Tagccccttt tcatcaatgg CD 301 actcctgacg tatacgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttTagcttT agccactcga attttcgata CD 401 ttcctttcta tttctcatcg aacgaatggc atcttcttct ggaa SQ SEQUENCE 148 AA; FVALECFSLC SYLLSGYTKR DLRSNEATMK YLLMGGASSS ILVYGFSWLY GLSGGEIELQ EIVNGLINTQ MYNSPGISIA LIFITVGIGF KLSLAPFHQW TPDVYEGSPT PVVAFLSVTS KVAALALATR IFDIPFYFSS NEWHLLLE // ID Z80867_1 STANDARD; PRT; 148 AA. AC Z80867; DT Tue Jul 21 07:06:47 2009 DE O.claytoniana chloroplast ndhB mRNA. OS chloroplast Osmunda claytoniana OC Osmunda claytoniana RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02573.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 32 S(tCa) -> L(tTa) FT EDITING : 92 P(cCC) -> L(cTT) FT EDITING : 97 S(tCt) -> F(tTt) FT EDITING : 116 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 tacgtagctt tggaatgttt aggtttatcc tcctatctat tatccggata CD 51 cacgaagaag gatatacgat ctaatgaagc tactatgaaa tattCactaa CD 101 tgggtggagc aagttcatcc attttggttt atggtttctc tttattacac CD 151 ggattatctg gaggagagat tcaactccaa agaatagtta atggacttat CD 201 atctacacag atgtataact ctacgggaat ctttatttct gtgatattca CD 251 tcactgcagg gctcggattt aaacCCtcgt tagttccttC tcatcaatgg CD 301 actcctgatg tttatgaagg atctcccact ccagttgttg ctttttCttc CD 351 cgttacttca aaagtagctg ctctagccct aactacgcga ctcttcacta CD 401 tccttttccc ttccttatac actgaatggc atctcgttct gggg FT EDITED CDNA CD 1 tacgtagctt tggaatgttt aggtttatcc tcctatctat tatccggata CD 51 cacgaagaag gatatacgat ctaatgaagc tactatgaaa tattTactaa CD 101 tgggtggagc aagttcatcc attttggttt atggtttctc tttattacac CD 151 ggattatctg gaggagagat tcaactccaa agaatagtta atggacttat CD 201 atctacacag atgtataact ctacgggaat ctttatttct gtgatattca CD 251 tcactgcagg gctcggattt aaacTTtcgt tagttccttT tcatcaatgg CD 301 actcctgatg tttatgaagg atctcccact ccagttgttg ctttttTttc CD 351 cgttacttca aaagtagctg ctctagccct aactacgcga ctcttcacta CD 401 tccttttccc ttccttatac actgaatggc atctcgttct gggg SQ SEQUENCE 148 AA; YVALECLGLS SYLLSGYTKK DIRSNEATMK YLLMGGASSS ILVYGFSLLH GLSGGEIQLQ RIVNGLISTQ MYNSTGIFIS VIFITAGLGF KLSLVPFHQW TPDVYEGSPT PVVAFFSVTS KVAALALTTR LFTILFPSLY TEWHLVLG // ID Z80870_1 STANDARD; PRT; 148 AA. AC Z80870; DT Tue Jul 21 07:06:47 2009 DE T.dolabrata chloroplast ndhB mRNA. OS chloroplast Thujopsis dolabrata OC Thujopsis dolabrata RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02576.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 125 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 ttcgtatctt tagaatgttt aagtctatgt tcttatctat tatctggata CD 51 taccaaaaga gatctacggt ctaatgaggc tattatgaaa tatttactta CD 101 tgggtggaac aagttcttcc attcttgctt atggtctttc ttggctatat CD 151 ggtctatctg gaggtgagat tgaaattcaa gaaatagcca atggtcttat CD 201 aaatacacaa atgtataact ctccaggaat ttggattgca cttctatcta CD 251 taatggtagg aattgcattc aagctttctt tagttccttt tcatcaatgg CD 301 atttttgatg tatatgaagg atcccccact ccagtcgttg cttttatttc CD 351 tgttatttca aaagtagctg cttCagcttt agccactaga atttttgata CD 401 ttatttttta tttctcattg aacgaatggc atcttctttt gaaa FT EDITED CDNA CD 1 ttcgtatctt tagaatgttt aagtctatgt tcttatctat tatctggata CD 51 taccaaaaga gatctacggt ctaatgaggc tattatgaaa tatttactta CD 101 tgggtggaac aagttcttcc attcttgctt atggtctttc ttggctatat CD 151 ggtctatctg gaggtgagat tgaaattcaa gaaatagcca atggtcttat CD 201 aaatacacaa atgtataact ctccaggaat ttggattgca cttctatcta CD 251 taatggtagg aattgcattc aagctttctt tagttccttt tcatcaatgg CD 301 atttttgatg tatatgaagg atcccccact ccagtcgttg cttttatttc CD 351 tgttatttca aaagtagctg cttTagcttt agccactaga atttttgata CD 401 ttatttttta tttctcattg aacgaatggc atcttctttt gaaa SQ SEQUENCE 148 AA; FVSLECLSLC SYLLSGYTKR DLRSNEAIMK YLLMGGTSSS ILAYGLSWLY GLSGGEIEIQ EIANGLINTQ MYNSPGIWIA LLSIMVGIAF KLSLVPFHQW IFDVYEGSPT PVVAFISVIS KVAALALATR IFDIIFYFSL NEWHLLLK // ID Z80871_1 STANDARD; PRT; 148 AA. AC Z80871; DT Tue Jul 21 07:06:47 2009 DE P.nudum chloroplast ndhB mRNA. OS chloroplast Psilotum nudum OC Psilotum nudum RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02577.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 49 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 ttcgtagcat cagaatgttt agcgttatct tcctatttat tatccggata CD 51 tacaaagaga gatgtacgat ccaatgaagc gatgatgaaa tacctcctca CD 101 tgggtggagc aagttcttcc atcctggttt atggtttttc cttgcCatac CD 151 ggcttatctg gaggggaaat tcaacttcga gggatggtga atggacttat CD 201 caacatgcaa atgtataact ctgcaggggt atctattgca atgatcttta CD 251 tccttgtggg aattggattt aaactatctc tggttccttt tcatcaatgg CD 301 acgcccgatg tatatgaagg atcccccact ccagttgttg cttttttttc CD 351 cgtcacttcg aaagtagctg ctttggctct agctactcga cttttccata CD 401 tcttattctc atctctatca aatgaatggc atcttcctct ggaa FT EDITED CDNA CD 1 ttcgtagcat cagaatgttt agcgttatct tcctatttat tatccggata CD 51 tacaaagaga gatgtacgat ccaatgaagc gatgatgaaa tacctcctca CD 101 tgggtggagc aagttcttcc atcctggttt atggtttttc cttgcTatac CD 151 ggcttatctg gaggggaaat tcaacttcga gggatggtga atggacttat CD 201 caacatgcaa atgtataact ctgcaggggt atctattgca atgatcttta CD 251 tccttgtggg aattggattt aaactatctc tggttccttt tcatcaatgg CD 301 acgcccgatg tatatgaagg atcccccact ccagttgttg cttttttttc CD 351 cgtcacttcg aaagtagctg ctttggctct agctactcga cttttccata CD 401 tcttattctc atctctatca aatgaatggc atcttcctct ggaa SQ SEQUENCE 148 AA; FVASECLALS SYLLSGYTKR DVRSNEAMMK YLLMGGASSS ILVYGFSLLY GLSGGEIQLR GMVNGLINMQ MYNSAGVSIA MIFILVGIGF KLSLVPFHQW TPDVYEGSPT PVVAFFSVTS KVAALALATR LFHILFSSLS NEWHLPLE // ID Z80872_1 STANDARD; PRT; 148 AA. AC Z80872; DT Tue Jul 21 07:06:47 2009 DE P.sativum chloroplast ndhB mRNA. OS chloroplast Pisum sativum (pea) OC Pisum sativum RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02578.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 44 H(Cat) -> Y(Tat) FT EDITING : 94 P(cCa) -> L(cTa) FT EDITING : 97 S(tCt) -> F(tTt) FT EDITING : 125 S(tCa) -> L(tTa) FT EDITING : 127 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 tttgtagctc tagaatgttt cagtttatgc tcctatctac tatctggata CD 51 taccaagaaa gatgtacggt ctaatgaggc tactatgaaa tatttactca CD 101 tgagtggcgc aagctcttct attctggttC atggtttctc ttggctatat CD 151 ggttcatccg ggggagagat agagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ctccgggaat ttcaattgcg cttatattca CD 251 tcactgtagg aattgggttc aagctttccc CagccccttC tcatcaatgg CD 301 actcctgacg tatatgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttCagcttC agccactcga attttggata CD 401 ttccttttta tttctcatca aacgaatggc atcttcttct ggaa FT EDITED CDNA CD 1 tttgtagctc tagaatgttt cagtttatgc tcctatctac tatctggata CD 51 taccaagaaa gatgtacggt ctaatgaggc tactatgaaa tatttactca CD 101 tgagtggcgc aagctcttct attctggttT atggtttctc ttggctatat CD 151 ggttcatccg ggggagagat agagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ctccgggaat ttcaattgcg cttatattca CD 251 tcactgtagg aattgggttc aagctttccc TagccccttT tcatcaatgg CD 301 actcctgacg tatatgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttTagcttT agccactcga attttggata CD 401 ttccttttta tttctcatca aacgaatggc atcttcttct ggaa SQ SEQUENCE 148 AA; FVALECFSLC SYLLSGYTKK DVRSNEATMK YLLMSGASSS ILVYGFSWLY GSSGGEIELQ EIVNGLINTQ MYNSPGISIA LIFITVGIGF KLSLAPFHQW TPDVYEGSPT PVVAFLSVTS KVAALALATR ILDIPFYFSS NEWHLLLE // ID Z80873_1 STANDARD; PRT; 148 AA. AC Z80873; DT Tue Jul 21 07:06:47 2009 DE P.vulgaris chloroplast ndhB mRNA. OS chloroplast Phaseolus vulgaris OC Phaseolus vulgaris RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02579.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 29 T(aCg) -> M(aTg) FT EDITING : 44 H(Cat) -> Y(Tat) FT EDITING : 94 P(cCa) -> L(cTa) FT EDITING : 97 S(tCt) -> F(tTt) FT EDITING : 125 S(tCa) -> L(tTa) FT EDITING : 127 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 tttgtagctc tagaatgttt cagtttatgt tcctatctac tatctggata CD 51 taccaagaaa gatgtacggt ctaatgaggc tactaCgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttC atggtttctc ttggctatat CD 151 ggttcatccg ggggagagat cgagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ccccaggaat tttaattgca cttttattca CD 251 tcactgtagg aattgggttc aagctttccc CagccccttC tcatcaatgg CD 301 actcctgacg tatacgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttCagcttC agccactcga attttcgata CD 401 tcccttttta tttctcatca aacgaatggc atcttcttct ggaa FT EDITED CDNA CD 1 tttgtagctc tagaatgttt cagtttatgt tcctatctac tatctggata CD 51 taccaagaaa gatgtacggt ctaatgaggc tactaTgaaa tatttactca CD 101 tgggtggggc aagctcttct attctggttT atggtttctc ttggctatat CD 151 ggttcatccg ggggagagat cgagcttcaa gaaatagtga atggtcttat CD 201 caatacacaa atgtataact ccccaggaat tttaattgca cttttattca CD 251 tcactgtagg aattgggttc aagctttccc TagccccttT tcatcaatgg CD 301 actcctgacg tatacgaagg atctcccact ccagtcgttg cttttctttc CD 351 tgttacttcg aaagtagctg cttTagcttT agccactcga attttcgata CD 401 tcccttttta tttctcatca aacgaatggc atcttcttct ggaa SQ SEQUENCE 148 AA; FVALECFSLC SYLLSGYTKK DVRSNEATMK YLLMGGASSS ILVYGFSWLY GSSGGEIELQ EIVNGLINTQ MYNSPGILIA LLFITVGIGF KLSLAPFHQW TPDVYEGSPT PVVAFLSVTS KVAALALATR IFDIPFYFSS NEWHLLLE // ID Z80874_1 STANDARD; PRT; 148 AA. AC Z80874; DT Tue Jul 21 07:06:47 2009 DE B.trilobata chloroplast ndhB mRNA. OS chloroplast Bazzania trilobata OC Bazzania trilobata RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 94 (12), 6285-6290 (1997) RL PUBMED 9177209 FT N-terminal not determined FT C-terminal not determined FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB02580.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 444 FT DIRECTIONS : positive FT EDITING : 128 S(tCa) -> L(tTa) FT EDITING : 131 P(cCc) -> L(cTc) FT CODON_START : 1 CL CDNALEN 444 NT; CD 1 tttgtatctc tagaatgttt aagtttatgt tcatatttat tatctggtta CD 51 tactaaaaaa gacgttcgat ctaacgaagc tgttatgaaa tatttactta CD 101 taggtggaac aagttcatct atattaattt atggtttttc ttggttatat CD 151 ggcttatcgg gaggagaatt tcaacttcaa aaaatagcga atggacttat CD 201 aaatacagaa atgtataatt cttcgggaac tttacttgga cttatattta CD 251 tcattgcagg aattggattt aaactttcct tagtaccttt tcatcaatgg CD 301 actcccgatg tatatgaagg atcccccacc ccagttgttg cttttctttc CD 351 ggttgcttcg aaaatagcag gtttagcttt atCagctcgt cCcttgaata CD 401 ttgtttttcc ctttcttttt aaccaatggc attttattct agaa FT EDITED CDNA CD 1 tttgtatctc tagaatgttt aagtttatgt tcatatttat tatctggtta CD 51 tactaaaaaa gacgttcgat ctaacgaagc tgttatgaaa tatttactta CD 101 taggtggaac aagttcatct atattaattt atggtttttc ttggttatat CD 151 ggcttatcgg gaggagaatt tcaacttcaa aaaatagcga atggacttat CD 201 aaatacagaa atgtataatt cttcgggaac tttacttgga cttatattta CD 251 tcattgcagg aattggattt aaactttcct tagtaccttt tcatcaatgg CD 301 actcccgatg tatatgaagg atcccccacc ccagttgttg cttttctttc CD 351 ggttgcttcg aaaatagcag gtttagcttt atTagctcgt cTcttgaata CD 401 ttgtttttcc ctttcttttt aaccaatggc attttattct agaa SQ SEQUENCE 148 AA; FVSLECLSLC SYLLSGYTKK DVRSNEAVMK YLLIGGTSSS ILIYGFSWLY GLSGGEFQLQ KIANGLINTE MYNSSGTLLG LIFIIAGIGF KLSLVPFHQW TPDVYEGSPT PVVAFLSVAS KIAGLALLAR LLNIVFPFLF NQWHFILE // ID Z85978_1 STANDARD; PRT; 119 AA. AC Z85978; DT Tue Jul 21 07:06:47 2009 DE S.bicolor mitochondrial nad3 and rps12 genes. OS Sorghum bicolor (sorghum) OC Sorghum bicolor RN [1] RL Unpublished FT Full length CDS FT GENE : nad3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB06623.1 FT PROTEIN_NAME : mitochondrial nad3 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 31 - 387 FT DIRECTIONS : positive FT EDITING : 13 I(atC) -> I(atT) FT EDITING : 15 P(CCg) -> L(TTg) FT EDITING : 21 P(CCa) -> L(TTa) FT EDITING : 27 P(CCa) -> L(TTa) FT EDITING : 49 S(tCc) -> F(tTc) FT EDITING : 64 P(Cct) -> S(Tct) FT EDITING : 70 P(CCt) -> F(TTt) FT EDITING : 72 P(cCg) -> L(cTg) FT EDITING : 77 S(tCt) -> F(tTt) FT EDITING : 83 P(Cct) -> S(Tct) FT EDITING : 84 P(cCt) -> L(cTt) FT EDITING : 92 S(tCt) -> F(tTt) FT EDITING : 106 S(tCt) -> F(tTt) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 117 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 357 NT; CD 1 atgtcggaat ttgcacctat ttgtatctat ttagtgatCa gtCCgctagt CD 51 ttctttgatt CCactcggtg ttccttttCC atttgcttcc aatagttcga CD 101 cctatccaga aaaattgtcg gcctacgaat gtggtttcga tccctCcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatccggttC ctattttatt CD 201 tattatcCCt gatcCggaag tcaccttttC ttttccttgg gcagtaCctc CD 251 Ctaacaagat tgatctgttt ggatCttggt ccatgatggc ctttttattg CD 301 attttgacga ttggatCtct ctatgaatgg aaaaggggtg cttCggatCg CD 351 ggagtaa FT EDITED CDNA CD 1 atgtcggaat ttgcacctat ttgtatctat ttagtgatTa gtTTgctagt CD 51 ttctttgatt TTactcggtg ttccttttTT atttgcttcc aatagttcga CD 101 cctatccaga aaaattgtcg gcctacgaat gtggtttcga tccctTcggt CD 151 gatgccagaa gtcgtttcga tatacgattt tatccggttT ctattttatt CD 201 tattatcTTt gatcTggaag tcaccttttT ttttccttgg gcagtaTctc CD 251 Ttaacaagat tgatctgttt ggatTttggt ccatgatggc ctttttattg CD 301 attttgacga ttggatTtct ctatgaatgg aaaaggggtg cttTggatTg CD 351 ggagtaa SQ SEQUENCE 119 AA; MSEFAPICIY LVISLLVSLI LLGVPFLFAS NSSTYPEKLS AYECGFDPFG DARSRFDIRF YPVSILFIIF DLEVTFFFPW AVSLNKIDLF GFWSMMAFLL ILTIGFLYEW KRGALDWE* // ID Z85978_2 STANDARD; PRT; 126 AA. AC Z85978; DT Tue Jul 21 07:06:47 2009 DE S.bicolor mitochondrial nad3 and rps12 genes. OS Sorghum bicolor (sorghum) OC Sorghum bicolor RN [1] RL Unpublished FT Full length CDS FT GENE : rps12 FT NOTE : ribosomal protein small mitochondrial subunit FT LOCUS_TAG : FT PROTEIN_ID : CAB06624.1 FT PROTEIN_NAME : mitochondrial rps12 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 432 - 809 FT DIRECTIONS : positive FT EDITING : 24 S(tCg) -> L(tTg) FT EDITING : 66 H(Cac) -> Y(Tac) FT EDITING : 74 S(tCg) -> L(tTg) FT EDITING : 90 S(tCg) -> L(tTg) FT EDITING : 95 S(tCc) -> F(tTc) FT EDITING : 97 R(Cgt) -> C(Tgt) FT CODON_START : 1 CL CDNALEN 378 NT; CD 1 atgcctacaa aaaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt Cggatcaatg tccccagaag caaggagtat CD 101 gcctgcgtgt ttcgacgaga acaccgaaaa aacctaattc agctctacgt CD 151 aagatagcaa aagtacggtt gagcaatcga catgatatat ttgctCacat CD 201 tccaggcgaa ggtcataatt Cgcaggaaca ttctatagtc ttagtcagag CD 251 gaggtagagt gaaagattCg ccaggtgtga aatCccatCg tattcgagga CD 301 gtcaaggatt tgctgggaat tccggatcgt agaaagggaa gatctaaata CD 351 tggtgcagaa agaccaaaat cgaaatga FT EDITED CDNA CD 1 atgcctacaa aaaatcaatt gattcgtcat ggtagagaag aaaaacggcg CD 51 cacggaccgt actcgagctt Tggatcaatg tccccagaag caaggagtat CD 101 gcctgcgtgt ttcgacgaga acaccgaaaa aacctaattc agctctacgt CD 151 aagatagcaa aagtacggtt gagcaatcga catgatatat ttgctTacat CD 201 tccaggcgaa ggtcataatt Tgcaggaaca ttctatagtc ttagtcagag CD 251 gaggtagagt gaaagattTg ccaggtgtga aatTccatTg tattcgagga CD 301 gtcaaggatt tgctgggaat tccggatcgt agaaagggaa gatctaaata CD 351 tggtgcagaa agaccaaaat cgaaatga SQ SEQUENCE 126 AA; MPTKNQLIRH GREEKRRTDR TRALDQCPQK QGVCLRVSTR TPKKPNSALR KIAKVRLSNR HDIFAYIPGE GHNLQEHSIV LVRGGRVKDL PGVKFHCIRG VKDLLGIPDR RKGRSKYGAE RPKSK* // ID AF082025_1 STANDARD; PRT; 207 AA. AC AF082025; DT Tue Jul 21 07:07:06 2009 DE Triticum aestivum ABC transporter CcbB (ccbB) gene, mitochondrial OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Biochim. Biophys. Acta 1519 (3), 199-208 (2001) RL PUBMED 11418186 FT Full length CDS FT GENE : ccbB FT NOTE : transmembrane subunit; located in the mitochondrial FT LOCUS_TAG : FT PROTEIN_ID : AAC64369.1 FT PROTEIN_NAME : ABC transporter CcbB FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1778 - 2398 FT DIRECTIONS : positive FT EDITING : 10 H(Cat) -> Y(Tat) FT EDITING : 13 I(atC) -> I(atT) FT EDITING : 15 P(Ccc) -> S(Tcc) FT EDITING : 27 S(tCg) -> L(tTg) FT EDITING : 29 I(atC) -> I(atT) FT EDITING : 43 S(tCa) -> L(tTa) FT EDITING : 46 S(tCc) -> F(tTc) FT EDITING : 50 S(tCg) -> L(tTg) FT EDITING : 52 R(Cgg) -> W(Tgg) FT EDITING : 54 P(Cct) -> S(Tct) FT EDITING : 58 P(Ccc) -> S(Tcc) FT EDITING : 60 P(cCt) -> L(cTt) FT EDITING : 61 P(CcC) -> S(TcT) FT EDITING : 65 P(CCt) -> F(TTt) FT EDITING : 96 R(Cgg) -> W(Tgg) FT EDITING : 102 R(Cgt) -> C(Tgt) FT EDITING : 113 P(cCg) -> L(cTg) FT EDITING : 123 R(Cgg) -> W(Tgg) FT EDITING : 127 L(Cta) -> L(Tta) FT EDITING : 131 P(CCg) -> L(TTg) FT EDITING : 136 L(Ctg) -> L(Ttg) FT EDITING : 142 R(Cgt) -> C(Tgt) FT EDITING : 143 S(tCg) -> L(tTg) FT EDITING : 147 I(atC) -> I(atT) FT EDITING : 156 S(tCg) -> L(tTg) FT EDITING : 159 P(CCa) -> L(TTa) FT EDITING : 162 S(tCa) -> L(tTa) FT EDITING : 168 P(CCa) -> L(TTa) FT EDITING : 171 S(tCc) -> F(tTc) FT EDITING : 172 R(Cgt) -> C(Tgt) FT EDITING : 184 S(tCa) -> L(tTa) FT EDITING : 185 S(tCg) -> L(tTg) FT EDITING : 189 S(tCc) -> F(tTc) FT EDITING : 190 S(tCt) -> F(tTt) FT EDITING : 191 P(cCt) -> L(cTt) FT EDITING : 199 S(tCg) -> L(tTg) FT EDITING : 204 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 621 NT; CD 1 atgagacgac tctttcttga acaatttCat aagcagatCt tcCcctccac CD 51 accaatcacg agtttttttt tattcctctC gtatatCgtc gtcacgccct CD 101 taatgatagg ttttgaaaaa gatttttCat gtcattCcca tttaggttCg CD 151 attCggatcC ctctgttgtt tCcctttcCt CcCgaacctt ttCCtcgaaa CD 201 tgataaagaa tctggtacac tcgaattgta ttatttaagt gcttattgct CD 251 tgccaaaaat cctacttcta caattggtag gtcacCgggt tattcaaata CD 301 agtCgtgttt tctgtgcttt tcccatgtta caacttcCgt accaattcga CD 351 tcgatccgga atggatCggt taaacattCt attagggagc CCggtcttga CD 401 ctcttCtgtg tggtattcat tctCgttCgg ctcttggaat Cacatccagc CD 451 agtggttgga acagctCgca aaatCCaacc acttCaccta ctttattgcc CD 501 cCCaaccgtt tCcCgtacct ctatagaaac agaagggttt catgttcttt CD 551 CatCgattgg gtattCctCt cCttttgtat ctctttatcc aatttCggtc CD 601 tcgattagtt Cacaagattg a FT EDITED CDNA CD 1 atgagacgac tctttcttga acaatttTat aagcagatTt tcTcctccac CD 51 accaatcacg agtttttttt tattcctctT gtatatTgtc gtcacgccct CD 101 taatgatagg ttttgaaaaa gatttttTat gtcattTcca tttaggttTg CD 151 attTggatcT ctctgttgtt tTcctttcTt TcTgaacctt ttTTtcgaaa CD 201 tgataaagaa tctggtacac tcgaattgta ttatttaagt gcttattgct CD 251 tgccaaaaat cctacttcta caattggtag gtcacTgggt tattcaaata CD 301 agtTgtgttt tctgtgcttt tcccatgtta caacttcTgt accaattcga CD 351 tcgatccgga atggatTggt taaacattTt attagggagc TTggtcttga CD 401 ctcttTtgtg tggtattcat tctTgttTgg ctcttggaat Tacatccagc CD 451 agtggttgga acagctTgca aaatTTaacc acttTaccta ctttattgcc CD 501 cTTaaccgtt tTcTgtacct ctatagaaac agaagggttt catgttcttt CD 551 TatTgattgg gtattTctTt cTttttgtat ctctttatcc aatttTggtc CD 601 tcgattagtt Tacaagattg a SQ SEQUENCE 207 AA; MRRLFLEQFY KQIFSSTPIT SFFLFLLYIV VTPLMIGFEK DFLCHFHLGL IWISLLFSFL SEPFFRNDKE SGTLELYYLS AYCLPKILLL QLVGHWVIQI SCVFCAFPML QLLYQFDRSG MDWLNILLGS LVLTLLCGIH SCLALGITSS SGWNSLQNLT TLPTLLPLTV FCTSIETEGF HVLLLIGYFF LFVSLYPILV SISLQD* // ID AF188852_3 STANDARD; PRT; 39 AA. AC AF188852; DT Tue Jul 21 07:07:07 2009 DE Nymphaea odorata cytochrome b-559, alpha subunit (psbE) gene, OS chloroplast Nymphaea odorata OC Nymphaea odorata RN [1] RL Curr. Genet. 37 (3), 183-188 (2000) RL PUBMED 10794175 FT Full length CDS FT GENE : psbL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAF82673.1 FT PROTEIN_NAME : photosystem II subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 394 - 510 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 aCgacacaat caaatccgaa cgaacaaaac gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattga FT EDITED CDNA CD 1 aTgacacaat caaatccgaa cgaacaaaac gttgaattga atcgtaccag CD 51 tctctactgg gggttattac tcatttttgt acttgctgtt ttattttcca CD 101 attatttctt caattga SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AF207682_1 STANDARD; PRT; 254 AA. AC AF207682; DT Tue Jul 21 07:07:08 2009 DE Amphicarpaea bracteata cytochrome oxidase subunit 2 (cox2) mRNA, OS mitochondrion Amphicarpaea bracteata (hog peanut) OC Amphicarpaea bracteata RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 96 (24), 13863-13868 (1999) RL PUBMED 10570164 FT Full length CDS FT GENE : cox2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAF43639.1 FT PROTEIN_NAME : cytochrome oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 762 FT DIRECTIONS : positive FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 54 R(Cgg) -> W(Tgg) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 92 P(cCg) -> L(cTg) FT EDITING : 126 R(Cgg) -> W(Tgg) FT EDITING : 147 T(aCg) -> M(aTg) FT EDITING : 158 S(tCa) -> L(tTa) FT EDITING : 181 P(Cct) -> S(Tct) FT EDITING : 185 P(cCt) -> L(cTt) FT EDITING : 210 S(tCg) -> L(tTg) FT EDITING : 232 T(aCg) -> M(aTg) FT EDITING : 240 P(Cct) -> S(Tct) FT EDITING : 247 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 762 NT; CD 1 atgaaattag aatggctatt cctcacgatt gctccttgtg atgcagcgga CD 51 accatggcaa ttaggatttc aagacgcagc aacacctatg atgcaaggaa CD 101 taatagactt acatcacgat atctttttct tcctcattct gattttggtt CD 151 ttcgtatCaC ggatcttggt tcgcgcttta tggcatttcc actataaaaa CD 201 aaatccaatc ccgcaaagga ttgttcatgg aactactatc gagattcttC CD 251 ggaccatatt tcctagtatc atccCgatgt tcattgctat accatcattt CD 301 gctctgctat actcaatgga cgaggtagta gtagatccag ccattactat CD 351 caaagctatt ggacatcaat ggtatCggac ttatgagtat tcagactata CD 401 acagttccga tgaacagtca ctcacttttg acagttataC gattccagaa CD 451 gatgatctag aattgggtca atCacgttta ttagaagtgg acaatagagt CD 501 ggttgtacca gccaaaactc atctacgtat tattgtaaca Cctgctgatg CD 551 tacCtcatag ttgggctgta ccttccttag gtgtcaaatg tgatgctgta CD 601 cctggtcgtt taaatcagat ctctatttCg gtacaacgag aaggggttta CD 651 ctatggtcag tgcagtgaga tttgtggaac taatcatgcc tttaCgccta CD 701 tcgtcgtaga agctgttCct actaaagatt atggttctCg ggttttcagt CD 751 caattccatt aa FT EDITED CDNA CD 1 atgaaattag aatggctatt cctcacgatt gctccttgtg atgcagcgga CD 51 accatggcaa ttaggatttc aagacgcagc aacacctatg atgcaaggaa CD 101 taatagactt acatcacgat atctttttct tcctcattct gattttggtt CD 151 ttcgtatTaT ggatcttggt tcgcgcttta tggcatttcc actataaaaa CD 201 aaatccaatc ccgcaaagga ttgttcatgg aactactatc gagattcttT CD 251 ggaccatatt tcctagtatc atccTgatgt tcattgctat accatcattt CD 301 gctctgctat actcaatgga cgaggtagta gtagatccag ccattactat CD 351 caaagctatt ggacatcaat ggtatTggac ttatgagtat tcagactata CD 401 acagttccga tgaacagtca ctcacttttg acagttataT gattccagaa CD 451 gatgatctag aattgggtca atTacgttta ttagaagtgg acaatagagt CD 501 ggttgtacca gccaaaactc atctacgtat tattgtaaca Tctgctgatg CD 551 tacTtcatag ttgggctgta ccttccttag gtgtcaaatg tgatgctgta CD 601 cctggtcgtt taaatcagat ctctatttTg gtacaacgag aaggggttta CD 651 ctatggtcag tgcagtgaga tttgtggaac taatcatgcc tttaTgccta CD 701 tcgtcgtaga agctgttTct actaaagatt atggttctTg ggttttcagt CD 751 caattccatt aa SQ SEQUENCE 254 AA; MKLEWLFLTI APCDAAEPWQ LGFQDAATPM MQGIIDLHHD IFFFLILILV FVLWILVRAL WHFHYKKNPI PQRIVHGTTI EILWTIFPSI ILMFIAIPSF ALLYSMDEVV VDPAITIKAI GHQWYWTYEY SDYNSSDEQS LTFDSYMIPE DDLELGQLRL LEVDNRVVVP AKTHLRIIVT SADVLHSWAV PSLGVKCDAV PGRLNQISIL VQREGVYYGQ CSEICGTNHA FMPIVVEAVS TKDYGSWVFS QFH* // ID AF207746_1 STANDARD; PRT; 254 AA. AC AF207746; DT Tue Jul 21 07:07:08 2009 DE Cologania lemmonii cytochrome oxidase subunit 2 (cox2) gene, OS mitochondrion Cologania lemmonii OC Cologania lemmonii RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 96 (24), 13863-13868 (1999) RL PUBMED 10570164 FT Full length CDS FT GENE : cox2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAF25663.1 FT PROTEIN_NAME : cytochrome oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 762 FT DIRECTIONS : positive FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 54 R(Cgg) -> W(Tgg) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 92 P(cCg) -> L(cTg) FT EDITING : 117 I(atC) -> I(atT) FT EDITING : 126 R(Cgg) -> W(Tgg) FT EDITING : 147 T(aCg) -> M(aTg) FT EDITING : 181 P(Cct) -> S(Tct) FT EDITING : 185 P(cCt) -> L(cTt) FT EDITING : 210 S(tCg) -> L(tTg) FT EDITING : 231 S(tCt) -> F(tTt) FT EDITING : 232 T(aCg) -> M(aTg) FT EDITING : 240 P(Cct) -> S(Tct) FT EDITING : 247 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 762 NT; CD 1 atgaaattag aatggctatt cctcacgatt gctccttgtg atgcagcgga CD 51 accttggcaa ttaggatttc aagacgcagc aacacctatg atgcaaggaa CD 101 taatagactt acatcacgat atctttttct tcctcattct gattttggtt CD 151 ttcgtatCaC ggatcttggt tcgcgcttta tggcatttcc actataaaaa CD 201 aaatccaatc ccgcaaagga ttgttcatgg aactactatc gagattcttC CD 251 ggaccatatt tcctagtatc atccCgatgt tcattgctat accatcattt CD 301 gctctgttat actcaatgga cgaggtagta gtagatccag ccattactat CD 351 Caaagctatt ggacatcaat ggtatCggac ttatgagtat tcagactata CD 401 acagtttcga tgaacagtca ctcacttttg acagttataC gattccagaa CD 451 gatgatctag aattgggtca attacgttta ttagaagtgg acaatagagt CD 501 ggttgtacca gccaaaactc atctacgtat tattgtaaca Cctgctgatg CD 551 tacCtcatag ttgggctgta ccttccttag gtgtcaaatg tgatgctgta CD 601 cctggtcgtt taaatcagat ctctatttCg gtacaacgag aaggggttta CD 651 ctatggtcag tgcagtgaga tttgtggaac taatcatgcc tCtaCgccta CD 701 tcgtcgtaga agctgttCct actaaagatt atggttgtCg ggttttcaat CD 751 caattccagt aa FT EDITED CDNA CD 1 atgaaattag aatggctatt cctcacgatt gctccttgtg atgcagcgga CD 51 accttggcaa ttaggatttc aagacgcagc aacacctatg atgcaaggaa CD 101 taatagactt acatcacgat atctttttct tcctcattct gattttggtt CD 151 ttcgtatTaT ggatcttggt tcgcgcttta tggcatttcc actataaaaa CD 201 aaatccaatc ccgcaaagga ttgttcatgg aactactatc gagattcttT CD 251 ggaccatatt tcctagtatc atccTgatgt tcattgctat accatcattt CD 301 gctctgttat actcaatgga cgaggtagta gtagatccag ccattactat CD 351 Taaagctatt ggacatcaat ggtatTggac ttatgagtat tcagactata CD 401 acagtttcga tgaacagtca ctcacttttg acagttataT gattccagaa CD 451 gatgatctag aattgggtca attacgttta ttagaagtgg acaatagagt CD 501 ggttgtacca gccaaaactc atctacgtat tattgtaaca Tctgctgatg CD 551 tacTtcatag ttgggctgta ccttccttag gtgtcaaatg tgatgctgta CD 601 cctggtcgtt taaatcagat ctctatttTg gtacaacgag aaggggttta CD 651 ctatggtcag tgcagtgaga tttgtggaac taatcatgcc tTtaTgccta CD 701 tcgtcgtaga agctgttTct actaaagatt atggttgtTg ggttttcaat CD 751 caattccagt aa SQ SEQUENCE 254 AA; MKLEWLFLTI APCDAAEPWQ LGFQDAATPM MQGIIDLHHD IFFFLILILV FVLWILVRAL WHFHYKKNPI PQRIVHGTTI EILWTIFPSI ILMFIAIPSF ALLYSMDEVV VDPAITIKAI GHQWYWTYEY SDYNSFDEQS LTFDSYMIPE DDLELGQLRL LEVDNRVVVP AKTHLRIIVT SADVLHSWAV PSLGVKCDAV PGRLNQISIL VQREGVYYGQ CSEICGTNHA FMPIVVEAVS TKDYGCWVFN QFQ* // ID AF207747_1 STANDARD; PRT; 254 AA. AC AF207747; DT Tue Jul 21 07:07:08 2009 DE Dumasia villosa cytochrome oxidase subunit 2 (cox2) gene, complete OS mitochondrion Dumasia villosa OC Dumasia villosa RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 96 (24), 13863-13868 (1999) RL PUBMED 10570164 FT Full length CDS FT GENE : cox2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAF45144.1 FT PROTEIN_NAME : cytochrome oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 762 FT DIRECTIONS : positive FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 54 R(Cgg) -> W(Tgg) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 92 P(cCg) -> L(cTg) FT EDITING : 105 P(Cca) -> S(Tca) FT EDITING : 117 I(atC) -> I(atT) FT EDITING : 126 R(Cgg) -> W(Tgg) FT EDITING : 147 T(aCg) -> M(aTg) FT EDITING : 158 S(tCa) -> L(tTa) FT EDITING : 181 P(Cct) -> S(Tct) FT EDITING : 185 P(cCt) -> L(cTt) FT EDITING : 210 S(tCg) -> L(tTg) FT EDITING : 232 T(aCg) -> M(aTg) FT EDITING : 240 P(Cct) -> S(Tct) FT EDITING : 247 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 762 NT; CD 1 atgaaattag aatggctatt cctcacgatt gctccttgtg atgcagcgga CD 51 accatggcaa ttaggatttc aagacgcagc aacacctatg atgcaaggaa CD 101 taatagactt acatcacgat atatttttct tcctcattct gattttggtt CD 151 ttcgtatCaC ggatcttggt tcgcgcttta tggcatttcc actataaaaa CD 201 aaatccaatc ccgcaaagga ttgttcatgg aactactatc gagattcttC CD 251 ggaccatatt tcctagtatc atccCgatgt tcattgctat accatcattt CD 301 gctctgttat acCcaatgga cgaggtagta gtagatccag ccattactat CD 351 Caaagctatt ggacatcaat ggtatCggac ttatgagtat tcagactata CD 401 acagttccga tgaacagtca ctcacttttg acagttataC gattccagaa CD 451 gatgatctag aattgggtca atCacgttta ttagaagtgg acaatagagt CD 501 ggttgtacca gccaaaactc atctacgtat tattgtaaca Cctgctgatg CD 551 tacCtcatag ttgggctgta ccttccttag gtgtcaaatg tgatgctgta CD 601 cctggtcgtt taaatcagat ctctatttCg gtacaacgag aaggggttta CD 651 ctatggtcag tgcagtgaga tttgtggaac taatcatgcc tttaCgccta CD 701 tcgtcgtaga agctgttCct actaaagatt ctggttctCg ggttttcaat CD 751 caattccatt aa FT EDITED CDNA CD 1 atgaaattag aatggctatt cctcacgatt gctccttgtg atgcagcgga CD 51 accatggcaa ttaggatttc aagacgcagc aacacctatg atgcaaggaa CD 101 taatagactt acatcacgat atatttttct tcctcattct gattttggtt CD 151 ttcgtatTaT ggatcttggt tcgcgcttta tggcatttcc actataaaaa CD 201 aaatccaatc ccgcaaagga ttgttcatgg aactactatc gagattcttT CD 251 ggaccatatt tcctagtatc atccTgatgt tcattgctat accatcattt CD 301 gctctgttat acTcaatgga cgaggtagta gtagatccag ccattactat CD 351 Taaagctatt ggacatcaat ggtatTggac ttatgagtat tcagactata CD 401 acagttccga tgaacagtca ctcacttttg acagttataT gattccagaa CD 451 gatgatctag aattgggtca atTacgttta ttagaagtgg acaatagagt CD 501 ggttgtacca gccaaaactc atctacgtat tattgtaaca Tctgctgatg CD 551 tacTtcatag ttgggctgta ccttccttag gtgtcaaatg tgatgctgta CD 601 cctggtcgtt taaatcagat ctctatttTg gtacaacgag aaggggttta CD 651 ctatggtcag tgcagtgaga tttgtggaac taatcatgcc tttaTgccta CD 701 tcgtcgtaga agctgttTct actaaagatt ctggttctTg ggttttcaat CD 751 caattccatt aa SQ SEQUENCE 254 AA; MKLEWLFLTI APCDAAEPWQ LGFQDAATPM MQGIIDLHHD IFFFLILILV FVLWILVRAL WHFHYKKNPI PQRIVHGTTI EILWTIFPSI ILMFIAIPSF ALLYSMDEVV VDPAITIKAI GHQWYWTYEY SDYNSSDEQS LTFDSYMIPE DDLELGQLRL LEVDNRVVVP AKTHLRIIVT SADVLHSWAV PSLGVKCDAV PGRLNQISIL VQREGVYYGQ CSEICGTNHA FMPIVVEAVS TKDSGSWVFN QFH* // ID AF208162_1 STANDARD; PRT; 254 AA. AC AF208162; DT Tue Jul 21 07:07:08 2009 DE Lespedeza formosa cytochrome oxidase subunit 2 (cox2) gene, OS mitochondrion Lespedeza formosa OC Lespedeza formosa RN [1] RL Proc. Natl. Acad. Sci. U.S.A. 96 (24), 13863-13868 (1999) RL PUBMED 10570164 FT Full length CDS FT GENE : cox2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAF27821.1 FT PROTEIN_NAME : cytochrome oxidase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 762 FT DIRECTIONS : positive FT EDITING : 53 S(tCa) -> L(tTa) FT EDITING : 54 R(Cgg) -> W(Tgg) FT EDITING : 84 R(Cgg) -> W(Tgg) FT EDITING : 92 P(cCg) -> L(cTg) FT EDITING : 126 R(Cgg) -> W(Tgg) FT EDITING : 147 T(aCg) -> M(aTg) FT EDITING : 158 S(tCa) -> L(tTa) FT EDITING : 181 P(Cct) -> S(Tct) FT EDITING : 185 P(cCt) -> L(cTt) FT EDITING : 210 S(tCg) -> L(tTg) FT EDITING : 232 T(aCg) -> M(aTg) FT EDITING : 240 P(Cct) -> S(Tct) FT EDITING : 247 R(Cgg) -> W(Tgg) FT CODON_START : 1 CL CDNALEN 762 NT; CD 1 atgaaattag aatggctatt cctcactttt gctccttgtg atgcagcgga CD 51 accatggcaa ttaggatttc aagacgcagc aacacctatg atgcaaggaa CD 101 taatagactt acatcacgat atctttttct tcctcattct gattttggtt CD 151 ttcgtatCaC ggatcttggt tcgcgcttta tggcatttcc actataaaaa CD 201 aaatccaatc ccgcaaagga ttgttcatgg aactactatc gagattcttC CD 251 ggaccatatt tccgagtatc atccCgatgt tcattgctat accatcattt CD 301 gctctgttat actcaatgga cgaggtagta gtagatccag ccattactat CD 351 caaagctatt ggacatcaat ggtatCggac ttatgagtat tcagactata CD 401 acagttccga tgaacagtca ctcacttttg acagttataC gattccagaa CD 451 gatgatctag aattgggtca atCacgttta ttagaagtgg acaatagagt CD 501 ggttgtacca gccaaaactc atctacgtat tattgtaaca Cctgctgatg CD 551 tacCtcatag ttgggctgta ccttccttag gtgtcaaatg tgatgctgta CD 601 cctggtcgtt taaatcagat ctctatttCg gtacaacgag aaggggttta CD 651 ctatggtcag tgcagtgaga tttgtggaac taatcatgcc tttaCgccta CD 701 tcgtcgtaga agctgttCct actaaagatt atggttctCg ggttttcaat CD 751 caattccatt aa FT EDITED CDNA CD 1 atgaaattag aatggctatt cctcactttt gctccttgtg atgcagcgga CD 51 accatggcaa ttaggatttc aagacgcagc aacacctatg atgcaaggaa CD 101 taatagactt acatcacgat atctttttct tcctcattct gattttggtt CD 151 ttcgtatTaT ggatcttggt tcgcgcttta tggcatttcc actataaaaa CD 201 aaatccaatc ccgcaaagga ttgttcatgg aactactatc gagattcttT CD 251 ggaccatatt tccgagtatc atccTgatgt tcattgctat accatcattt CD 301 gctctgttat actcaatgga cgaggtagta gtagatccag ccattactat CD 351 caaagctatt ggacatcaat ggtatTggac ttatgagtat tcagactata CD 401 acagttccga tgaacagtca ctcacttttg acagttataT gattccagaa CD 451 gatgatctag aattgggtca atTacgttta ttagaagtgg acaatagagt CD 501 ggttgtacca gccaaaactc atctacgtat tattgtaaca Tctgctgatg CD 551 tacTtcatag ttgggctgta ccttccttag gtgtcaaatg tgatgctgta CD 601 cctggtcgtt taaatcagat ctctatttTg gtacaacgag aaggggttta CD 651 ctatggtcag tgcagtgaga tttgtggaac taatcatgcc tttaTgccta CD 701 tcgtcgtaga agctgttTct actaaagatt atggttctTg ggttttcaat CD 751 caattccatt aa SQ SEQUENCE 254 AA; MKLEWLFLTF APCDAAEPWQ LGFQDAATPM MQGIIDLHHD IFFFLILILV FVLWILVRAL WHFHYKKNPI PQRIVHGTTI EILWTIFPSI ILMFIAIPSF ALLYSMDEVV VDPAITIKAI GHQWYWTYEY SDYNSSDEQS LTFDSYMIPE DDLELGQLRL LEVDNRVVVP AKTHLRIIVT SADVLHSWAV PSLGVKCDAV PGRLNQISIL VQREGVYYGQ CSEICGTNHA FMPIVVEAVS TKDYGSWVFN QFH* // ID AF288044_1 STANDARD; PRT; 389 AA. AC AF288044; DT Tue Jul 21 07:07:09 2009 DE Cucumis sativus cultivar Calypso apocytochrome b (cob) gene, OS mitochondrion Cucumis sativus (cucumber) OC Cucumis sativus RN [1] RL Curr. Genet. 40 (2), 144-151 (2001) RL PUBMED 11680824 FT Full length CDS FT GENE : cob FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAP47577.1 FT PROTEIN_NAME : apocytochrome b FT EVIDENCE : FT EXCEPTION : FT REGIONS : 3047 - 4213 FT DIRECTIONS : positive FT EDITING : 40 P(Ccg) -> S(Tcg) FT EDITING : 96 L(Ctc) -> F(Ttc) FT EDITING : 100 H(Cac) -> Y(Tac) FT EDITING : 109 H(Cat) -> Y(Tat) FT EDITING : 120 R(Cgg) -> W(Tgg) FT EDITING : 136 T(aCa) -> I(aTa) FT EDITING : 190 H(Cat) -> Y(Tat) FT EDITING : 270 P(Ccc) -> S(Tcc) FT EDITING : 285 H(Cat) -> Y(Tat) FT EDITING : 303 P(cCa) -> L(cTa) FT EDITING : 328 H(Cac) -> Y(Tac) FT EDITING : 362 P(Cct) -> S(Tct) FT EDITING : 375 P(cCg) -> L(cTg) FT CODON_START : 1 CL CDNALEN 1167 NT; CD 1 atgactaaaa gaaagcaacg attctctctt cttaaacaac ctatatcctc CD 51 cacactgaat cagcatttga tagattatcc aaccccgagc aatcttagtt CD 101 attggtgggg gttcggtCcg ttagcaggtc tttgtttagt cattcagata CD 151 gtgactggcc tttttttagc tatgcattac acacctcatg tggatctagc CD 201 tttcaacagc gtagaacaca ttatgagaga tgtttcaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttCtcat tgtggttCac CD 301 cttcatattt ttcgtggtct atatCatgcg agttatagca gtcctaggga CD 351 atttgttCgg tgtctcggag ttatcatctt cctattaatg attgtgacag CD 401 cttttaCagg atacgtacta ccttggggtc agatgagctt ttggggagca CD 451 actgtaatta caagcttagc tagcgccata cccgtagtag gagataccat CD 501 agtgacttgg ctttggggtg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tctgcatCat ttactccctt ttcttttagc aggcgccagt CD 601 cttcttcatc tggccgcatt gcatcaatat ggatcaaata atccattggg CD 651 tgtacattca gagatggata aaatcgcttt ttacccttat ttttatgtca CD 701 aggatctagt gggttgggta gcttttgcta tctttttttc agtgtggatt CD 751 ttttatgctc ctaatgtttt ggggcatccc gacaattata tacctgctaa CD 801 tccgatgCcc accccgcctc atattgtgcc ggaatggtat ttcctaccga CD 851 tcCatgccat tcttcgtagt atacctgaca aagcgggagg tgtagccgca CD 901 atagcacCag tttttatatg tctcttggct ttaccttttt ctaaaagtat CD 951 gtatgtgcgt agttcaagtt ttcgccctat tCaccaagga ctattttggt CD 1001 tgcttttggc ggattgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaggcaccat ttgtgactat gggacaaatt tctCcttttc ttttcttctt CD 1101 cttctttgcc ataacgccca ttcCgggacg agttggaaga ggaattccta CD 1151 attcttacac gggatga FT EDITED CDNA CD 1 atgactaaaa gaaagcaacg attctctctt cttaaacaac ctatatcctc CD 51 cacactgaat cagcatttga tagattatcc aaccccgagc aatcttagtt CD 101 attggtgggg gttcggtTcg ttagcaggtc tttgtttagt cattcagata CD 151 gtgactggcc tttttttagc tatgcattac acacctcatg tggatctagc CD 201 tttcaacagc gtagaacaca ttatgagaga tgtttcaggg ggctggttgc CD 251 tccgttatat gcatgctaat ggggcaagta tgtttTtcat tgtggttTac CD 301 cttcatattt ttcgtggtct atatTatgcg agttatagca gtcctaggga CD 351 atttgttTgg tgtctcggag ttatcatctt cctattaatg attgtgacag CD 401 cttttaTagg atacgtacta ccttggggtc agatgagctt ttggggagca CD 451 actgtaatta caagcttagc tagcgccata cccgtagtag gagataccat CD 501 agtgacttgg ctttggggtg gtttctccgt ggacaatgcc accttaaatc CD 551 gtttttttag tctgcatTat ttactccctt ttcttttagc aggcgccagt CD 601 cttcttcatc tggccgcatt gcatcaatat ggatcaaata atccattggg CD 651 tgtacattca gagatggata aaatcgcttt ttacccttat ttttatgtca CD 701 aggatctagt gggttgggta gcttttgcta tctttttttc agtgtggatt CD 751 ttttatgctc ctaatgtttt ggggcatccc gacaattata tacctgctaa CD 801 tccgatgTcc accccgcctc atattgtgcc ggaatggtat ttcctaccga CD 851 tcTatgccat tcttcgtagt atacctgaca aagcgggagg tgtagccgca CD 901 atagcacTag tttttatatg tctcttggct ttaccttttt ctaaaagtat CD 951 gtatgtgcgt agttcaagtt ttcgccctat tTaccaagga ctattttggt CD 1001 tgcttttggc ggattgctta ctactaggtt ggatcggatg tcaacctgtg CD 1051 gaggcaccat ttgtgactat gggacaaatt tctTcttttc ttttcttctt CD 1101 cttctttgcc ataacgccca ttcTgggacg agttggaaga ggaattccta CD 1151 attcttacac gggatga SQ SEQUENCE 389 AA; MTKRKQRFSL LKQPISSTLN QHLIDYPTPS NLSYWWGFGS LAGLCLVIQI VTGLFLAMHY TPHVDLAFNS VEHIMRDVSG GWLLRYMHAN GASMFFIVVY LHIFRGLYYA SYSSPREFVW CLGVIIFLLM IVTAFIGYVL PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNRFFSLHY LLPFLLAGAS LLHLAALHQY GSNNPLGVHS EMDKIAFYPY FYVKDLVGWV AFAIFFSVWI FYAPNVLGHP DNYIPANPMS TPPHIVPEWY FLPIYAILRS IPDKAGGVAA IALVFICLLA LPFSKSMYVR SSSFRPIYQG LFWLLLADCL LLGWIGCQPV EAPFVTMGQI SSFLFFFFFA ITPILGRVGR GIPNSYTG* // ID AF357519_1 STANDARD; PRT; 371 AA. AC AF357519; DT Tue Jul 21 07:07:12 2009 DE Pfiesteria piscicida cytochrome b gene, partial cds; mitochondrial. OS mitochondrion Pfiesteria piscicida OC Pfiesteria piscicida RN [1] RL Appl. Environ. Microbiol. 68 (2), 989-994 (2002) RL PUBMED 11823251 FT C-terminal not determined FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAL83616.2 FT PROTEIN_NAME : cytochrome b FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 1112 FT DIRECTIONS : positive FT EDITING : 6 S(tCt) -> F(tTt) FT EDITING : 36 S(tCt) -> F(tTt) FT EDITING : 38 W(tgA) -> W(tgG) FT EDITING : 40 L(Ctt) -> F(Ttt) FT EDITING : 46 I(Att) -> V(Gtt) FT EDITING : 47 T(Act) -> A(Gct) FT EDITING : 59 G(gGt) -> A(gCt) FT EDITING : 71 S(tCt) -> F(tTt) FT EDITING : 76 F(Ttt) -> L(Ctt) FT EDITING : 80 I(Ata) -> V(Gta) FT EDITING : 89 L(Ctt) -> F(Ttt) FT EDITING : 109 I(atA) -> M(atG) FT EDITING : 110 S(tCt) -> F(tTt) FT EDITING : 129 F(Ttc) -> L(Ctc) FT EDITING : 134 T(aCa) -> I(aTa) FT EDITING : 172 H(Cat) -> Y(Tat) FT EDITING : 173 Y(tAt) -> C(tGt) FT EDITING : 175 Y(Tac) -> H(Cac) FT EDITING : 176 N(aAt) -> S(aGt) FT EDITING : 189 F(Ttc) -> L(Ctc) FT EDITING : 197 W(tGa) -> S(tCa) FT EDITING : 235 F(TtC) -> L(CtT) FT EDITING : 238 I(Att) -> V(Gtt) FT EDITING : 243 L(Ctt) -> F(Ttt) FT EDITING : 244 L(Ctt) -> F(Ttt) FT EDITING : 250 I(Atc) -> V(Gtc) FT EDITING : 262 V(gTt) -> A(gCt) FT EDITING : 264 G(gGa) -> A(gCa) FT EDITING : 302 F(Ttc) -> L(Ctc) FT EDITING : 304 F(Ttc) -> L(Ctc) FT EDITING : 306 F(Ttc) -> L(Ctc) FT EDITING : 323 G(Ggt) -> S(Agt) FT EDITING : 328 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 1112 NT; CD 1 ttgttgattc caaattCttc tttctattgc atttacagga ttacatattt CD 51 tgtattacta atgaaatctc atttacaatc atatccttgt cctcttcaga CD 101 taaattCttt ttgAaatCtt ggttttcttc ttggaAttAc tattatatta CD 151 caaattatca ctggaatctt attagGttta cattatacat cagatcttaa CD 201 ttcagcatat tCtagtcttt tctttTttat tagagaaAta ttctatggat CD 251 ggtgtttacg ttatCttcat tctagtggag catcatttgt ctttcttttt CD 301 ctatttctac atcttggaag agctatAtCt tatggttcat acttttataa CD 351 tccaaatact tggttttcag gaattattct cttcTtcttc ttaatggcta CD 401 Cagcatttat gggttatgtc ttaccttttg gacaaatgag tttctgggga CD 451 gctacagtaa ttacaaattt attatctcct tttccatctt taatagaatg CD 501 ggtttctgga ggaCattAtg ttTacaAtcc aacattgaag aggttctttc CD 551 tttttcatta tcaaTtccca tttcttgttt gtggtttttG aattcttcat CD 601 cttttttatc ttcattttct atcttctaat aatcctttga ggaattcaac CD 651 aaataataaa atcccatttt tccctttaat ttttgataaa gatttctttg CD 701 gtTtCattct aAttctctgt ctatatCttC ttgaaactca tttcgggAtc CD 751 tcttctttat cacatccaga taatgcatta gaagTttgtg Gattacttac CD 801 tcctttacat atagtacctg aatggtattt cctatgccaa tatgctatgt CD 851 taaaagctgt accaaacaaa aatgcaggat tcataatctt attaacttct CD 901 atcTtcattT tcttaTtctt tggagaaatt agaaatctaa caactttgtg CD 951 tctcttaaat aataatGgtt tttctctttc atCtttattc tctctttctc CD 1001 tttcttttct ttggataggt tatcaattcc ctcaagagaa gtttctatct CD 1051 tatgctcgta tcttgacatt atattattat tttcttctta tgtgtatctt CD 1101 gttctcaaaa aa FT EDITED CDNA CD 1 ttgttgattc caaattTttc tttctattgc atttacagga ttacatattt CD 51 tgtattacta atgaaatctc atttacaatc atatccttgt cctcttcaga CD 101 taaattTttt ttgGaatTtt ggttttcttc ttggaGttGc tattatatta CD 151 caaattatca ctggaatctt attagCttta cattatacat cagatcttaa CD 201 ttcagcatat tTtagtcttt tctttCttat tagagaaGta ttctatggat CD 251 ggtgtttacg ttatTttcat tctagtggag catcatttgt ctttcttttt CD 301 ctatttctac atcttggaag agctatGtTt tatggttcat acttttataa CD 351 tccaaatact tggttttcag gaattattct cttcCtcttc ttaatggcta CD 401 Tagcatttat gggttatgtc ttaccttttg gacaaatgag tttctgggga CD 451 gctacagtaa ttacaaattt attatctcct tttccatctt taatagaatg CD 501 ggtttctgga ggaTattGtg ttCacaGtcc aacattgaag aggttctttc CD 551 tttttcatta tcaaCtccca tttcttgttt gtggtttttC aattcttcat CD 601 cttttttatc ttcattttct atcttctaat aatcctttga ggaattcaac CD 651 aaataataaa atcccatttt tccctttaat ttttgataaa gatttctttg CD 701 gtCtTattct aGttctctgt ctatatTttT ttgaaactca tttcgggGtc CD 751 tcttctttat cacatccaga taatgcatta gaagCttgtg Cattacttac CD 801 tcctttacat atagtacctg aatggtattt cctatgccaa tatgctatgt CD 851 taaaagctgt accaaacaaa aatgcaggat tcataatctt attaacttct CD 901 atcCtcattC tcttaCtctt tggagaaatt agaaatctaa caactttgtg CD 951 tctcttaaat aataatAgtt tttctctttc atTtttattc tctctttctc CD 1001 tttcttttct ttggataggt tatcaattcc ctcaagagaa gtttctatct CD 1051 tatgctcgta tcttgacatt atattattat tttcttctta tgtgtatctt CD 1101 gttctcaaaa aa SQ SEQUENCE 371 AA; LLIPNFSFYC IYRITYFVLL MKSHLQSYPC PLQINFFWNF GFLLGVAIIL QIITGILLAL HYTSDLNSAY FSLFFLIREV FYGWCLRYFH SSGASFVFLF LFLHLGRAMF YGSYFYNPNT WFSGIILFLF LMAIAFMGYV LPFGQMSFWG ATVITNLLSP FPSLIEWVSG GYCVHSPTLK RFFLFHYQLP FLVCGFSILH LFYLHFLSSN NPLRNSTNNK IPFFPLIFDK DFFGLILVLC LYFFETHFGV SSLSHPDNAL EACALLTPLH IVPEWYFLCQ YAMLKAVPNK NAGFIILLTS ILILLLFGEI RNLTTLCLLN NNSFSLSFLF SLSLSFLWIG YQFPQEKFLS YARILTLYYY FLLMCILFSK X // ID AF362731_1 STANDARD; PRT; 95 AA. AC AF362731; DT Tue Jul 21 07:07:13 2009 DE Podophyllum peltatum succinate dehydrogenase subunit 3 (sdh3) mRNA, OS mitochondrion Podophyllum peltatum OC Podophyllum peltatum RN [1] RL Genetics 158 (3), 1289-1300 (2001) RL PUBMED 11454775 FT N-terminal not determined FT C-terminal not determined FT GENE : sdh3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAK77127.1 FT PROTEIN_NAME : succinate dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 286 FT DIRECTIONS : positive FT EDITING : 6 L(ctC) -> L(ctT) FT EDITING : 11 P(Cca) -> S(Tca) FT EDITING : 13 S(tCc) -> F(tTc) FT EDITING : 41 T(acC) -> T(acT) FT EDITING : 55 L(ctC) -> L(ctT) FT EDITING : 56 I(atC) -> I(atT) FT CODON_START : 2 CL CDNALEN 286 NT; CD 1 tatttataag ccagagctCa cttcgacgtt tCcaatttCc catagaatct CD 51 ccggggcttt cctagccact atagttttgt tttgttatct cttgtattta CD 101 aaaatgggtt ttatttgctt cacCtatgag aatttctacc aattcttgtt CD 151 ttattcatca aagctCatCc taatattagt cgagattact gccttagccc CD 201 tgtcttatca tctttataat ggagttcgtc atttattgac ggatttttcg CD 251 ggatttttgt attgttcttt gattagattt gcagaa FT EDITED CDNA CD 1 tatttataag ccagagctTa cttcgacgtt tTcaatttTc catagaatct CD 51 ccggggcttt cctagccact atagttttgt tttgttatct cttgtattta CD 101 aaaatgggtt ttatttgctt cacTtatgag aatttctacc aattcttgtt CD 151 ttattcatca aagctTatTc taatattagt cgagattact gccttagccc CD 201 tgtcttatca tctttataat ggagttcgtc atttattgac ggatttttcg CD 251 ggatttttgt attgttcttt gattagattt gcagaa SQ SEQUENCE 95 AA; IYKPELTSTF SIFHRISGAF LATIVLFCYL LYLKMGFICF TYENFYQFLF YSSKLILILV EITALALSYH LYNGVRHLLT DFSGFLYCSL IRFAE // ID AF362732_1 STANDARD; PRT; 79 AA. AC AF362732; DT Tue Jul 21 07:07:13 2009 DE Oxalis regnellii succinate dehydrogenase subunit 3 (sdh3) mRNA, OS mitochondrion Oxalis regnellii OC Oxalis regnellii RN [1] RL Genetics 158 (3), 1289-1300 (2001) RL PUBMED 11454775 FT N-terminal not determined FT C-terminal not determined FT GENE : sdh3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAK77128.1 FT PROTEIN_NAME : succinate dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 236 FT DIRECTIONS : positive FT EDITING : 6 L(ctC) -> L(ctT) FT EDITING : 11 P(Cca) -> S(Tca) FT EDITING : 13 S(tCc) -> F(tTc) FT EDITING : 52 S(tCt) -> F(tTt) FT EDITING : 56 I(atC) -> I(atT) FT CODON_START : 2 CL CDNALEN 236 NT; CD 1 tatttataag ccacagctCa cttcgacgtt tCcaatttCc catagaatct CD 51 ccggggcttt cctatccact atagttttgt ttttttatct tctttgtctg CD 101 aaaataggtt tgatttgctt cacctattca aatttctacc aattcttctt CD 151 tttttCtaaa aagctcatCc taatctccgt cgagatgact gccttagccc CD 201 tgtcctatca tctttataat ggggttcggc atttat FT EDITED CDNA CD 1 tatttataag ccacagctTa cttcgacgtt tTcaatttTc catagaatct CD 51 ccggggcttt cctatccact atagttttgt ttttttatct tctttgtctg CD 101 aaaataggtt tgatttgctt cacctattca aatttctacc aattcttctt CD 151 tttttTtaaa aagctcatTc taatctccgt cgagatgact gccttagccc CD 201 tgtcctatca tctttataat ggggttcggc atttat SQ SEQUENCE 79 AA; IYKPQLTSTF SIFHRISGAF LSTIVLFFYL LCLKIGLICF TYSNFYQFFF FFKKLILISV EMTALALSYH LYNGVRHLX // ID AF362733_1 STANDARD; PRT; 93 AA. AC AF362733; DT Tue Jul 21 07:07:13 2009 DE Gymnocladus dioica succinate dehydrogenase subunit 3 (sdh3) mRNA, OS mitochondrion Gymnocladus dioica (Kentucky coffee tree) OC Gymnocladus dioica RN [1] RL Genetics 158 (3), 1289-1300 (2001) RL PUBMED 11454775 FT N-terminal not determined FT C-terminal not determined FT GENE : sdh3 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAK77129.1 FT PROTEIN_NAME : succinate dehydrogenase subunit 3 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 278 FT DIRECTIONS : positive FT EDITING : 11 P(Cca) -> S(Tca) FT EDITING : 52 S(tCa) -> L(tTa) FT EDITING : 56 I(atC) -> I(atT) FT CODON_START : 2 CL CDNALEN 278 NT; CD 1 tatttataag ccacagctca cttcgacgtt tCcaattttc catagaatct CD 51 ccggggcttt cctagccact atagttttgt ttttttatct tctttgtctg CD 101 aaaataggtt tgatttgctt cacctattca aatttctacc aatttttatt CD 151 tttttCatca aagctcatCc taatctccgt cgagattact gccttagccc CD 201 tgtcctatca tttgtataat ggagttcgtc atttattgac ggatttgggg CD 251 ggatttctct ttcttagaat tggaagaa FT EDITED CDNA CD 1 tatttataag ccacagctca cttcgacgtt tTcaattttc catagaatct CD 51 ccggggcttt cctagccact atagttttgt ttttttatct tctttgtctg CD 101 aaaataggtt tgatttgctt cacctattca aatttctacc aatttttatt CD 151 tttttTatca aagctcatTc taatctccgt cgagattact gccttagccc CD 201 tgtcctatca tttgtataat ggagttcgtc atttattgac ggatttgggg CD 251 ggatttctct ttcttagaat tggaagaa SQ SEQUENCE 93 AA; IYKPQLTSTF SIFHRISGAF LATIVLFFYL LCLKIGLICF TYSNFYQFLF FLSKLILISV EITALALSYH LYNGVRHLLT DLGGFLFLRI GRX // ID AF362735_1 STANDARD; PRT; 101 AA. AC AF362735; DT Tue Jul 21 07:07:13 2009 DE Lycopersicon esculentum succinate dehydrogenase subunit 4 (sdh4) OS mitochondrion Solanum lycopersicum (Lycopersicon esculentum) OC Solanum lycopersicum RN [1] RL Genetics 158 (3), 1289-1300 (2001) RL PUBMED 11454775 FT C-terminal not determined FT GENE : sdh4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAK77854.1 FT PROTEIN_NAME : succinate dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 87 - 388 FT DIRECTIONS : positive FT EDITING : 28 F(ttC) -> F(ttT) FT EDITING : 29 P(cCa) -> L(cTa) FT EDITING : 41 S(tcC) -> S(tcT) FT EDITING : 45 P(cCa) -> L(cTa) FT EDITING : 64 H(Cat) -> Y(Tat) FT EDITING : 93 L(ctC) -> L(ctT) FT EDITING : 95 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 302 NT; CD 1 atgaaggaag gaatcagtgg attgaggaat gaaagctcga agacaaagag CD 51 aaccgggctt ttccaaagaa ttactgcagc tttCcCactc cctttgatta CD 101 tcatatacaa aaaggtctct tcCactttcc tacCaaatct ctctctattc CD 151 tggcacataa atgaagggat cgaagagatt atggcagatC atgttcacca CD 201 agaaatgacc cgaaattgga tcttggtcta tttgagattg ttccttttaa CD 251 tcgtaatcaa agatgttttc ttgtctctCg tttCttttct gaaaaaaaaa CD 301 aa FT EDITED CDNA CD 1 atgaaggaag gaatcagtgg attgaggaat gaaagctcga agacaaagag CD 51 aaccgggctt ttccaaagaa ttactgcagc tttTcTactc cctttgatta CD 101 tcatatacaa aaaggtctct tcTactttcc tacTaaatct ctctctattc CD 151 tggcacataa atgaagggat cgaagagatt atggcagatT atgttcacca CD 201 agaaatgacc cgaaattgga tcttggtcta tttgagattg ttccttttaa CD 251 tcgtaatcaa agatgttttc ttgtctctTg tttTttttct gaaaaaaaaa CD 301 aa SQ SEQUENCE 101 AA; MKEGISGLRN ESSKTKRTGL FQRITAAFLL PLIIIYKKVS STFLLNLSLF WHINEGIEEI MADYVHQEMT RNWILVYLRL FLLIVIKDVF LSLVFFLKKK X // ID AF362736_1 STANDARD; PRT; 101 AA. AC AF362736; DT Tue Jul 21 07:07:13 2009 DE Podophyllum peltatum succinate dehydrogenase subunit 4 (sdh4) mRNA, OS mitochondrion Podophyllum peltatum OC Podophyllum peltatum RN [1] RL Genetics 158 (3), 1289-1300 (2001) RL PUBMED 11454775 FT C-terminal not determined FT GENE : sdh4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAK77855.1 FT PROTEIN_NAME : succinate dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 87 - 388 FT DIRECTIONS : positive FT EDITING : 5 I(atC) -> I(atT) FT EDITING : 28 F(ttC) -> F(ttT) FT EDITING : 29 P(CCa) -> L(TTa) FT EDITING : 34 I(atC) -> I(atT) FT CODON_START : 1 CL CDNALEN 302 NT; CD 1 atgaaggaac gaatCagtgg attgaggaat gaaagctcga agacaaagag CD 51 aaccgggctt ttcaaaagaa ttactgcagc tttCCCactc cctttgatta CD 101 tCatatacaa aaaagtatct tccactttcc taccaaatct ctctgtattc CD 151 tggcacataa atgaagggat cgaagagatt atggcagatc atgttcacca CD 201 agaaatgacc cgaaatttga tcttggtcta tttgagattg ttccttttaa CD 251 tcgtaatcaa agatgttttc ttgtctctcg tttcttttcc gaacaaatcg CD 301 aa FT EDITED CDNA CD 1 atgaaggaac gaatTagtgg attgaggaat gaaagctcga agacaaagag CD 51 aaccgggctt ttcaaaagaa ttactgcagc tttTTTactc cctttgatta CD 101 tTatatacaa aaaagtatct tccactttcc taccaaatct ctctgtattc CD 151 tggcacataa atgaagggat cgaagagatt atggcagatc atgttcacca CD 201 agaaatgacc cgaaatttga tcttggtcta tttgagattg ttccttttaa CD 251 tcgtaatcaa agatgttttc ttgtctctcg tttcttttcc gaacaaatcg CD 301 aa SQ SEQUENCE 101 AA; MKERISGLRN ESSKTKRTGL FKRITAAFLL PLIIIYKKVS STFLPNLSVF WHINEGIEEI MADHVHQEMT RNLILVYLRL FLLIVIKDVF LSLVSFPNKS X // ID AF362738_1 STANDARD; PRT; 101 AA. AC AF362738; DT Tue Jul 21 07:07:13 2009 DE Euphorbia pubentissima succinate dehydrogenase subunit 4 (sdh4) OS mitochondrion Euphorbia pubentissima OC Euphorbia pubentissima RN [1] RL Genetics 158 (3), 1289-1300 (2001) RL PUBMED 11454775 FT C-terminal not determined FT GENE : sdh4 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAK77857.1 FT PROTEIN_NAME : succinate dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 87 - 389 FT DIRECTIONS : positive FT EDITING : 35 T(aCa) -> I(aTa) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 atgaaggaac gaaagagtag attgaggaat gaaagctcga agacaaagag CD 51 aatcgggctt ttccaaagaa ttactgctgc tttgctgctc cctttgatta CD 101 tcaCatacaa aaaagtctct tccactttcc tacttaatct ctctttattc CD 151 tggcatataa ataaagggat cgaagatatt atggcagatt atgttcacca CD 201 agaaatgacc cgaaatttga tcttggtcta ttttagattg ttccttttaa CD 251 tcgtaatcaa agatcttttc ttctttctcg tttttttttc tgaacaaatc CD 301 gaa FT EDITED CDNA CD 1 atgaaggaac gaaagagtag attgaggaat gaaagctcga agacaaagag CD 51 aatcgggctt ttccaaagaa ttactgctgc tttgctgctc cctttgatta CD 101 tcaTatacaa aaaagtctct tccactttcc tacttaatct ctctttattc CD 151 tggcatataa ataaagggat cgaagatatt atggcagatt atgttcacca CD 201 agaaatgacc cgaaatttga tcttggtcta ttttagattg ttccttttaa CD 251 tcgtaatcaa agatcttttc ttctttctcg tttttttttc tgaacaaatc CD 301 gaa SQ SEQUENCE 101 AA; MKERKSRLRN ESSKTKRIGL FQRITAALLL PLIIIYKKVS STFLLNLSLF WHINKGIEDI MADYVHQEMT RNLILVYFRL FLLIVIKDLF FFLVFFSEQI E // ID AF390542_1 STANDARD; PRT; 75 AA. AC AF390542; DT Tue Jul 21 07:07:13 2009 DE Zea mays ATP synthase subunit 9 (atp9) mRNA, complete cds; OS mitochondrion Zea mays OC Zea mays RN [1] RL Curr. Genet. 42 (3), 179-184 (2002) RL PUBMED 12491012 FT Full length CDS FT GENE : atp9 FT NOTE : transcript modified by RNA editing FT LOCUS_TAG : FT PROTEIN_ID : AAK73729.1 FT PROTEIN_NAME : ATP synthase subunit 9 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 225 FT DIRECTIONS : positive FT EDITING : 7 S(tCa) -> L(tTa) FT EDITING : 28 L(Ctc) -> F(Ttc) FT EDITING : 31 S(tCg) -> L(tTg) FT EDITING : 45 S(tCa) -> L(tTa) FT EDITING : 61 S(tCg) -> L(tTg) FT EDITING : 64 P(cCa) -> L(cTa) FT EDITING : 71 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 225 NT; CD 1 atgttagaag gagctaaatC aataggtgct ggagctgcta caattgcttt CD 51 agcgggagct gctgtcggta ttggaaacgt tCtcagttct tCgattcatt CD 101 ccgtggcgcg aaatccttca ttggctaaac aatCattcgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca tCgtttgccc Caatgatggc CD 201 ctttctgatc tCattcgttt tctaa FT EDITED CDNA CD 1 atgttagaag gagctaaatT aataggtgct ggagctgcta caattgcttt CD 51 agcgggagct gctgtcggta ttggaaacgt tTtcagttct tTgattcatt CD 101 ccgtggcgcg aaatccttca ttggctaaac aatTattcgg ttatgccatt CD 151 ttgggctttg ctctcaccga agctattgca tTgtttgccc Taatgatggc CD 201 ctttctgatc tTattcgttt tctaa SQ SEQUENCE 75 AA; MLEGAKLIGA GAATIALAGA AVGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA LFALMMAFLI LFVF* // ID AF463412_1 STANDARD; PRT; 446 AA. AC AF463412; DT Tue Jul 21 07:07:20 2009 DE Pfiesteria piscicida cytochrome oxidase subunit 1 (cox1) gene, OS mitochondrion Pfiesteria piscicida OC Pfiesteria piscicida RN [1] RL J. Mol. Biol. 320 (4), 727-739 (2002) RL PUBMED 12095251 FT N-terminal not determined FT C-terminal not determined FT GENE : cox1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAM97693.2 FT PROTEIN_NAME : cytochrome oxidase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 1338 FT DIRECTIONS : positive FT EDITING : 16 V(Gtc) -> I(Atc) FT EDITING : 20 M(atG) -> I(atA) FT EDITING : 42 V(Gta) -> I(Ata) FT EDITING : 49 L(Ctt) -> F(Ttt) FT EDITING : 92 F(tTt) -> S(tCt) FT EDITING : 97 L(Ctc) -> F(Ttc) FT EDITING : 139 V(Gtc) -> I(Atc) FT EDITING : 153 A(Gca) -> T(Aca) FT EDITING : 162 C(tGt) -> Y(tAt) FT EDITING : 179 A(gCa) -> G(gGa) FT EDITING : 180 A(gCa) -> G(gGa) FT EDITING : 188 V(Gtc) -> I(Atc) FT EDITING : 210 V(Gtc) -> I(Atc) FT EDITING : 216 V(Gta) -> I(Ata) FT EDITING : 217 L(Ctc) -> F(Ttc) FT EDITING : 240 V(Gtc) -> I(Atc) FT EDITING : 249 S(tCa) -> L(tTa) FT EDITING : 323 R(aGa) -> K(aAa) FT EDITING : 325 S(aGt) -> N(aAt) FT EDITING : 327 S(Tca) -> P(Cca) FT EDITING : 328 L(Ctc) -> F(Ttc) FT EDITING : 330 A(gCa) -> G(gGa) FT CODON_START : 1 CL CDNALEN 1338 NT; CD 1 tattatttat tatcagcatt catctttggg atctccggta cattaGtctc CD 51 agtccttatG agaatagaat tatattcatc aggaaatagg attatatctc CD 101 cagaaaacca gaacttctat aatGtaagca taaccttgca tgggCttctt CD 151 atgatcttct ttttagtaat gcccggcttg tttggaggat ttggaaatta CD 201 ttttgttgtt atctttcaag ggtctccaga agtggtatat cctagagtca CD 251 ataatttttc tatcttaatt ctttTtcttt catatcttCt cctaatcctt CD 301 tctttaatct cagagtttgg aggtggaaca ggatggacat tatatccacc CD 351 attaagtact tctttcatga gcttatcacc ttcaagtaca ggaaatctta CD 401 tctttggatt attaGtctca ggtatatcct catgtctcac atctcttaac CD 451 ttttggGcaa caattctaaa tctgagatct tattGtctga cattaaagac CD 501 tatgccatta ttcccttggg ctctcttgat tacagCagCa atgcttttat CD 551 ttacattacc aGtcttatca ggagctcttc taatggtctt ggctgatctt CD 601 cattctaata cacttttctt tgatccaGtc tttggaggag atcctGtaCt CD 651 ctatcaacac ttattttggt tttttggaca tccagaagtt tacatcttaa CD 701 taattccagc atttgggGtc attagcataa taatttctgg aatttCacaa CD 751 aaaataatct ttgggaaccc atcaatgatc tttgccatga gctgtatttc CD 801 tcttcttgga agtgttgttt ggggtcatca tatgtatact gtaggtttag CD 851 aaactgatac aagagcttat ttttctggag ttactatctt gatatcctta CD 901 ccgactggta caaaaatctt taattggtta agtacatatc ttgggaatcc CD 951 ggcattgtta ctgctcaGaa ctaGttcaTc aCtctttgCa cttctctttt CD 1001 tattaatgtt tactataggt ggctcaacag gaataattct tggaaatgca CD 1051 gcagtggatc taggattaca tgatacatat tatgttgtag ctcattttca CD 1101 ttttgttctt tctttaggag ctgtaattgc tatcttatct ggagtgatct CD 1151 tcaatggaga aaagattgtt ggctctaaga atttattacc ttcatcctct CD 1201 tccaggaact ctctttatca tttggtttca acatttattg gtattcttct CD 1251 aaccttttct ccaatgcatt tcctaggatt taatgttatg ccaagaagaa CD 1301 taccggactt tccagattct tttcattcct ggaatttt FT EDITED CDNA CD 1 tattatttat tatcagcatt catctttggg atctccggta cattaAtctc CD 51 agtccttatA agaatagaat tatattcatc aggaaatagg attatatctc CD 101 cagaaaacca gaacttctat aatAtaagca taaccttgca tgggTttctt CD 151 atgatcttct ttttagtaat gcccggcttg tttggaggat ttggaaatta CD 201 ttttgttgtt atctttcaag ggtctccaga agtggtatat cctagagtca CD 251 ataatttttc tatcttaatt ctttCtcttt catatcttTt cctaatcctt CD 301 tctttaatct cagagtttgg aggtggaaca ggatggacat tatatccacc CD 351 attaagtact tctttcatga gcttatcacc ttcaagtaca ggaaatctta CD 401 tctttggatt attaAtctca ggtatatcct catgtctcac atctcttaac CD 451 ttttggAcaa caattctaaa tctgagatct tattAtctga cattaaagac CD 501 tatgccatta ttcccttggg ctctcttgat tacagGagGa atgcttttat CD 551 ttacattacc aAtcttatca ggagctcttc taatggtctt ggctgatctt CD 601 cattctaata cacttttctt tgatccaAtc tttggaggag atcctAtaTt CD 651 ctatcaacac ttattttggt tttttggaca tccagaagtt tacatcttaa CD 701 taattccagc atttgggAtc attagcataa taatttctgg aatttTacaa CD 751 aaaataatct ttgggaaccc atcaatgatc tttgccatga gctgtatttc CD 801 tcttcttgga agtgttgttt ggggtcatca tatgtatact gtaggtttag CD 851 aaactgatac aagagcttat ttttctggag ttactatctt gatatcctta CD 901 ccgactggta caaaaatctt taattggtta agtacatatc ttgggaatcc CD 951 ggcattgtta ctgctcaAaa ctaAttcaCc aTtctttgGa cttctctttt CD 1001 tattaatgtt tactataggt ggctcaacag gaataattct tggaaatgca CD 1051 gcagtggatc taggattaca tgatacatat tatgttgtag ctcattttca CD 1101 ttttgttctt tctttaggag ctgtaattgc tatcttatct ggagtgatct CD 1151 tcaatggaga aaagattgtt ggctctaaga atttattacc ttcatcctct CD 1201 tccaggaact ctctttatca tttggtttca acatttattg gtattcttct CD 1251 aaccttttct ccaatgcatt tcctaggatt taatgttatg ccaagaagaa CD 1301 taccggactt tccagattct tttcattcct ggaatttt SQ SEQUENCE 446 AA; YYLLSAFIFG ISGTLISVLI RIELYSSGNR IISPENQNFY NISITLHGFL MIFFLVMPGL FGGFGNYFVV IFQGSPEVVY PRVNNFSILI LSLSYLFLIL SLISEFGGGT GWTLYPPLST SFMSLSPSST GNLIFGLLIS GISSCLTSLN FWTTILNLRS YYLTLKTMPL FPWALLITGG MLLFTLPILS GALLMVLADL HSNTLFFDPI FGGDPIFYQH LFWFFGHPEV YILIIPAFGI ISIIISGILQ KIIFGNPSMI FAMSCISLLG SVVWGHHMYT VGLETDTRAY FSGVTILISL PTGTKIFNWL STYLGNPALL LLKTNSPFFG LLFLLMFTIG GSTGIILGNA AVDLGLHDTY YVVAHFHFVL SLGAVIAILS GVIFNGEKIV GSKNLLPSSS SRNSLYHLVS TFIGILLTFS PMHFLGFNVM PRRIPDFPDS FHSWNF // ID AF463414_1 STANDARD; PRT; 444 AA. AC AF463414; DT Tue Jul 21 07:07:20 2009 DE Prorocentrum minimum cytochrome oxidase subunit 1 (cox1) gene, OS mitochondrion Prorocentrum minimum OC Prorocentrum minimum RN [1] RL J. Mol. Biol. 320 (4), 727-739 (2002) RL PUBMED 12095251 FT N-terminal not determined FT C-terminal not determined FT GENE : cox1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAM97695.2 FT PROTEIN_NAME : cytochrome oxidase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 1330 FT DIRECTIONS : positive FT EDITING : 16 V(Gtc) -> I(Atc) FT EDITING : 20 M(atG) -> I(atA) FT EDITING : 42 V(Gta) -> I(Ata) FT EDITING : 49 L(Ctt) -> F(Ttt) FT EDITING : 68 L(Ctt) -> F(Ttt) FT EDITING : 86 L(Ctt) -> F(Ttt) FT EDITING : 97 L(Ctc) -> F(Ttc) FT EDITING : 131 A(gCa) -> G(gGa) FT EDITING : 135 L(Ctt) -> F(Ttt) FT EDITING : 139 V(Gtc) -> I(Atc) FT EDITING : 140 S(tcG) -> S(tcA) FT EDITING : 153 A(Gca) -> T(Aca) FT EDITING : 162 C(tGt) -> Y(tAt) FT EDITING : 173 W(tgG) -> W(tgA) FT EDITING : 180 A(gCa) -> G(gGa) FT EDITING : 188 V(Gtc) -> I(Atc) FT EDITING : 210 V(Gtg) -> M(Atg) FT EDITING : 216 V(Gta) -> I(Ata) FT EDITING : 217 L(Ctc) -> F(Ttc) FT EDITING : 248 V(Gtt) -> I(Att) FT EDITING : 249 S(tCa) -> L(tTa) FT EDITING : 323 R(aGa) -> K(aAa) FT EDITING : 328 L(Ctc) -> F(Ttc) FT EDITING : 330 A(gCt) -> G(gGt) FT CODON_START : 1 CL CDNALEN 1330 NT; CD 1 tattatttat tatcatcatt tatctttggg atctccggta cattaGtctc CD 51 agtccttatG agaatagaat tatattcatc aggaaatagg attatatctc CD 101 cagaaaacca gaacttctat aatGtaagca taagcttgca tggcCttctt CD 151 atgatcttct ttttagtaat gcctggcttg tttggtggat ttggaaatta CD 201 tCttcttgtt atctttcaag ggtctcctga agtggtatat cctagagtca CD 251 ataatCtttc tatcttaatt ctttttcttt catatcttCt cctaatgctt CD 301 tctttaatat cagagtttgg aggtggaaca ggatggacat tatatccacc CD 351 attaagcact tcttttatga gtttatcacc ttcaagtaca gCaaatctta CD 401 tcCttggatt attaGtctcG ggtatatcct catgtctcac atctcttaac CD 451 ttttggGcaa caattctaaa tctgagctct tattGtctga cattaaagac CD 501 tatgccatta ttcccttgGg ctctcttgat tacagcagCa atgcttttat CD 551 taacattacc aGtcttatca ggaggtcttc taatggtctt gtctgatctt CD 601 caatctaata cacttttctt tgatccaGtg tttggaggag atcctGtaCt CD 651 ctatcaacac ttattttggt tctttggaca tccagaagtt tacatcttaa CD 701 taattccagc atttgggatc attagcataa taatttctgg tGtttCacaa CD 751 aaaataatct ttgggaacca atcaatgatc tttgccatga gctgtatttc CD 801 tcttcttgga agtgttgttt gaggacatca tatgtatact gtaggtttag CD 851 aaactgatac aagagcttat tttacaggag ttacaatctt gatatcctta CD 901 ccgactggta caaaaatctt taattggtta agtacatatc ttgggagtct CD 951 gccattctta cagctgaGaa ctagttcagc aCtctttgCt cttctctttt CD 1001 tattaatgtt tactataggt ggctcaacag gaataattct tgcaaatgca CD 1051 gcactggatc taggattaca tgatacatat tatgttgtag ctcattttca CD 1101 ttttgttctt tctttaggag ctgtaattgc tatcttctct ggaataatct CD 1151 tcaatggaga aaatattgtt ggctctaaga atttattacc ttcatcctca CD 1201 tgtactctct ctctttatca tttggtttca acatttattg gtattctact CD 1251 taccttttcc ccaatgcatt tcttaggatt taacatattg ccaagaagaa CD 1301 ttccggactt tccagattct tttcattcat FT EDITED CDNA CD 1 tattatttat tatcatcatt tatctttggg atctccggta cattaAtctc CD 51 agtccttatA agaatagaat tatattcatc aggaaatagg attatatctc CD 101 cagaaaacca gaacttctat aatAtaagca taagcttgca tggcTttctt CD 151 atgatcttct ttttagtaat gcctggcttg tttggtggat ttggaaatta CD 201 tTttcttgtt atctttcaag ggtctcctga agtggtatat cctagagtca CD 251 ataatTtttc tatcttaatt ctttttcttt catatcttTt cctaatgctt CD 301 tctttaatat cagagtttgg aggtggaaca ggatggacat tatatccacc CD 351 attaagcact tcttttatga gtttatcacc ttcaagtaca gGaaatctta CD 401 tcTttggatt attaAtctcA ggtatatcct catgtctcac atctcttaac CD 451 ttttggAcaa caattctaaa tctgagctct tattAtctga cattaaagac CD 501 tatgccatta ttcccttgAg ctctcttgat tacagcagGa atgcttttat CD 551 taacattacc aAtcttatca ggaggtcttc taatggtctt gtctgatctt CD 601 caatctaata cacttttctt tgatccaAtg tttggaggag atcctAtaTt CD 651 ctatcaacac ttattttggt tctttggaca tccagaagtt tacatcttaa CD 701 taattccagc atttgggatc attagcataa taatttctgg tAtttTacaa CD 751 aaaataatct ttgggaacca atcaatgatc tttgccatga gctgtatttc CD 801 tcttcttgga agtgttgttt gaggacatca tatgtatact gtaggtttag CD 851 aaactgatac aagagcttat tttacaggag ttacaatctt gatatcctta CD 901 ccgactggta caaaaatctt taattggtta agtacatatc ttgggagtct CD 951 gccattctta cagctgaAaa ctagttcagc aTtctttgGt cttctctttt CD 1001 tattaatgtt tactataggt ggctcaacag gaataattct tgcaaatgca CD 1051 gcactggatc taggattaca tgatacatat tatgttgtag ctcattttca CD 1101 ttttgttctt tctttaggag ctgtaattgc tatcttctct ggaataatct CD 1151 tcaatggaga aaatattgtt ggctctaaga atttattacc ttcatcctca CD 1201 tgtactctct ctctttatca tttggtttca acatttattg gtattctact CD 1251 taccttttcc ccaatgcatt tcttaggatt taacatattg ccaagaagaa CD 1301 ttccggactt tccagattct tttcattcat SQ SEQUENCE 444 AA; YYLLSSFIFG ISGTLISVLI RIELYSSGNR IISPENQNFY NISISLHGFL MIFFLVMPGL FGGFGNYFLV IFQGSPEVVY PRVNNFSILI LFLSYLFLML SLISEFGGGT GWTLYPPLST SFMSLSPSST GNLIFGLLIS GISSCLTSLN FWTTILNLSS YYLTLKTMPL FPWALLITAG MLLLTLPILS GGLLMVLSDL QSNTLFFDPM FGGDPIFYQH LFWFFGHPEV YILIIPAFGI ISIIISGILQ KIIFGNQSMI FAMSCISLLG SVVWGHHMYT VGLETDTRAY FTGVTILISL PTGTKIFNWL STYLGSLPFL QLKTSSAFFG LLFLLMFTIG GSTGIILANA ALDLGLHDTY YVVAHFHFVL SLGAVIAIFS GIIFNGENIV GSKNLLPSSS CTLSLYHLVS TFIGILLTFS PMHFLGFNIL PRRIPDFPDS FHSX // ID AF463416_1 STANDARD; PRT; 446 AA. AC AF463416; DT Tue Jul 21 07:07:20 2009 DE Karlodinium micrum cytochrome oxidase subunit 1 (cox1) gene, OS mitochondrion Karlodinium micrum OC Karlodinium micrum RN [1] RL Unpublished FT N-terminal not determined FT C-terminal not determined FT GENE : cox1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAQ04825.2 FT PROTEIN_NAME : cytochrome oxidase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 1338 FT DIRECTIONS : positive FT EDITING : 11 V(Gtc) -> I(Atc) FT EDITING : 42 V(Gtt) -> I(Att) FT EDITING : 44 V(Gta) -> I(Ata) FT EDITING : 49 L(Ctt) -> F(Ttt) FT EDITING : 60 L(Ctc) -> F(Ttc) FT EDITING : 69 A(gCa) -> V(gTa) FT EDITING : 86 L(Ctt) -> F(Ttt) FT EDITING : 92 F(tTt) -> S(tCt) FT EDITING : 96 F(Ttt) -> L(Ctt) FT EDITING : 97 L(Ctt) -> F(Ttt) FT EDITING : 99 V(Gtt) -> I(Att) FT EDITING : 103 V(Gtt) -> I(Att) FT EDITING : 129 A(Gcc) -> T(Acc) FT EDITING : 142 V(Gta) -> I(Ata) FT EDITING : 153 V(Gtt) -> I(Att) FT EDITING : 162 C(tGt) -> Y(tAt) FT EDITING : 179 A(gCa) -> G(gGa) FT EDITING : 180 A(gCa) -> G(gGa) FT EDITING : 188 V(Gtc) -> I(Atc) FT EDITING : 210 V(Gtc) -> I(Atc) FT EDITING : 216 V(Gta) -> I(Ata) FT EDITING : 217 L(Ctc) -> F(Ttc) FT EDITING : 252 M(atG) -> I(atA) FT EDITING : 271 T(aCt) -> S(aGt) FT EDITING : 323 R(aGa) -> K(aAa) FT EDITING : 325 A(GcT) -> T(AcC) FT EDITING : 330 A(gCa) -> G(gGa) FT CODON_START : 1 CL CDNALEN 1338 NT; CD 1 tattatttat tatcagcatt catctttggg Gtctctggta cattaatttc CD 51 agtccttcta agaatagaat tatattcaac aggaaacagg attatatctc CD 101 cagaaaacca gaacttctat aatGtttccG taagcttgca tgggCttatt CD 151 atgattttct ttttagtaat gcctggaCtc tttggtggtt ttggaaatta CD 201 ttttgCacct atctttcaag ggtctccaga agtggtatat cctagagtca CD 251 ataatCtttc tatcttaatt ctttTtcttt cttatTttCt tgttGttctt CD 301 tcttttGttt cagagtttgg aggtggaaca ggatggacat tatatccacc CD 351 attaagcact tctttcatga gtttatcacc ttcaGccaca gcttatctta CD 401 tctttggatt attaatgtca ggtGtatcct catgtctcac ttctattaac CD 451 ttttttGtta caattcttaa tctgagatct tattGtctta cattaaagac CD 501 tatgccatta ttcccatggt ctctcttgat aacagCagCa atgctattat CD 551 taacattacc aGtcttatca ggtgcattcc taatggtctt ggctgatctt CD 601 cattctaatt cacttttctt tgatccaGtc tttggaggag atcctGtaCt CD 651 ctatcaacac ttattttggt tttttggaca tccagaagtt tacatcttaa CD 701 taattccagc atttgggatc attagcataa taatttcttc tgcttatcaa CD 751 aaaatGatct ttgggaacca atcaatgatc tttgccatga gctgtatttc CD 801 tcttcttgga aCtgttgttt ggggacatca tatgtatact gtaggtttag CD 851 aaactgatac cagagcttat tttacaggag ttacaatctt gatatccttg CD 901 ccaactggta caaaaatctt taattggtta tctacatatc ttgggaatcc CD 951 accattgtta cacctcaGaa ctGcTtcagc attctttgCa cttctctttt CD 1001 tattaatgtt tactataggt ggctcaacag gaataattct tggaaatgca CD 1051 gctctggatc taggattaca tgatacatat tatgttgtag ctcattttca CD 1101 ttttgttctt tctttaggag ctgtcattgc tatcttctct ggaataatct CD 1151 tcattggaga aaagattgtt gcctctcaga ttttattacc ttcatcctct CD 1201 agtactctct ctctttatca tttagtttca acatttattg ggattcttct CD 1251 caccttttct ccaatgcatt tcctaggatt taatgttatg ccaagaagaa CD 1301 tcccggactt tccagatact tttcattcct ggaatttt FT EDITED CDNA CD 1 tattatttat tatcagcatt catctttggg Atctctggta cattaatttc CD 51 agtccttcta agaatagaat tatattcaac aggaaacagg attatatctc CD 101 cagaaaacca gaacttctat aatAtttccA taagcttgca tgggTttatt CD 151 atgattttct ttttagtaat gcctggaTtc tttggtggtt ttggaaatta CD 201 ttttgTacct atctttcaag ggtctccaga agtggtatat cctagagtca CD 251 ataatTtttc tatcttaatt ctttCtcttt cttatCttTt tgttAttctt CD 301 tcttttAttt cagagtttgg aggtggaaca ggatggacat tatatccacc CD 351 attaagcact tctttcatga gtttatcacc ttcaAccaca gcttatctta CD 401 tctttggatt attaatgtca ggtAtatcct catgtctcac ttctattaac CD 451 ttttttAtta caattcttaa tctgagatct tattAtctta cattaaagac CD 501 tatgccatta ttcccatggt ctctcttgat aacagGagGa atgctattat CD 551 taacattacc aAtcttatca ggtgcattcc taatggtctt ggctgatctt CD 601 cattctaatt cacttttctt tgatccaAtc tttggaggag atcctAtaTt CD 651 ctatcaacac ttattttggt tttttggaca tccagaagtt tacatcttaa CD 701 taattccagc atttgggatc attagcataa taatttcttc tgcttatcaa CD 751 aaaatAatct ttgggaacca atcaatgatc tttgccatga gctgtatttc CD 801 tcttcttgga aGtgttgttt ggggacatca tatgtatact gtaggtttag CD 851 aaactgatac cagagcttat tttacaggag ttacaatctt gatatccttg CD 901 ccaactggta caaaaatctt taattggtta tctacatatc ttgggaatcc CD 951 accattgtta cacctcaAaa ctAcCtcagc attctttgGa cttctctttt CD 1001 tattaatgtt tactataggt ggctcaacag gaataattct tggaaatgca CD 1051 gctctggatc taggattaca tgatacatat tatgttgtag ctcattttca CD 1101 ttttgttctt tctttaggag ctgtcattgc tatcttctct ggaataatct CD 1151 tcattggaga aaagattgtt gcctctcaga ttttattacc ttcatcctct CD 1201 agtactctct ctctttatca tttagtttca acatttattg ggattcttct CD 1251 caccttttct ccaatgcatt tcctaggatt taatgttatg ccaagaagaa CD 1301 tcccggactt tccagatact tttcattcct ggaatttt SQ SEQUENCE 446 AA; YYLLSAFIFG ISGTLISVLL RIELYSTGNR IISPENQNFY NISISLHGFI MIFFLVMPGF FGGFGNYFVP IFQGSPEVVY PRVNNFSILI LSLSYLFVIL SFISEFGGGT GWTLYPPLST SFMSLSPSTT AYLIFGLLMS GISSCLTSIN FFITILNLRS YYLTLKTMPL FPWSLLITGG MLLLTLPILS GAFLMVLADL HSNSLFFDPI FGGDPIFYQH LFWFFGHPEV YILIIPAFGI ISIIISSAYQ KIIFGNQSMI FAMSCISLLG SVVWGHHMYT VGLETDTRAY FTGVTILISL PTGTKIFNWL STYLGNPPLL HLKTTSAFFG LLFLLMFTIG GSTGIILGNA ALDLGLHDTY YVVAHFHFVL SLGAVIAIFS GIIFIGEKIV ASQILLPSSS STLSLYHLVS TFIGILLTFS PMHFLGFNVM PRRIPDFPDT FHSWNF // ID AF536187_1 STANDARD; PRT; 356 AA. AC AF536187; DT Tue Jul 21 07:07:22 2009 DE Zea mays bicistronic S male sterility locus variant 1 mRNA, OS mitochondrion Zea mays OC Zea mays RN [1] RL Curr. Genet. 42 (3), 179-184 (2002) RL PUBMED 12491012 FT Full length CDS FT GENE : FT NOTE : ORF355 FT LOCUS_TAG : FT PROTEIN_ID : AAN40747.1 FT PROTEIN_NAME : unknown FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 1068 FT DIRECTIONS : positive FT EDITING : 151 L(cTc) -> P(cCc) FT EDITING : 212 R(Agg) -> G(Ggg) FT CODON_START : 1 CL CDNALEN 1068 NT; CD 1 atggaagata ttatgagcac gattcgcata ttgttgccct tgcgtaagca CD 51 gattaccgga tattttgaca aaccgagcct ttctcttaat cgagattcta CD 101 ctaatgagtt cttaagcacc tttctaaaaa cttacatcga ggatattcat CD 151 gatttccatt tcatcgatga agatcctata gatcggggag aatcctcttt CD 201 atcattagac aagaagaata caacttatta cgaggctgat gcaagtgatg CD 251 aagaaatgga tataacagat gggatagagg gaatcatagg gggtactaat CD 301 cgaggccaca acggtggtgg cgacggtgaa gctctattca ttcaaataag CD 351 caggttactt atggaatata taaagtatta tatactcaac ataacacata CD 401 cctatgatgc tatgctaagc gagataccat ggtggatagc agatagtatc CD 451 cTcaaactct tatcgttagt atgtatacat tatatacttc gatttaatcc CD 501 tcttatctat atgggcaatc gatttgatat tatttataag gtgctgggct CD 551 cagtgggagc tggcctcaaa tctctcattc cgcaatctat agtagccatt CD 601 ttcatgcaag tttcaactcg tcattttgat gaaAggcatc gtaagtatct CD 651 ctacggtttc tttaatatac ttgtgtatta cggcatagga ttagttgttc CD 701 ggtactatat cacaccacac cttatacctg atttaggatt cttccgctta CD 751 caggttttga ctcatttatg tgacgagaat gcgggtgctt ctgttcccgc CD 801 tgctccgccc ttacctcaaa ggcgggcggg ggcgcgtttt ccaactatct CD 851 tattgccccc tgagcccaac gaacctcctc aatcgggggt cgggcgctca CD 901 gctactactc cgccagaacc gaaaacttcc acagcatgtt tggaagttgt CD 951 gaaagccctc ctgaatgggg ctgcccgggg gtgcaccggg agttggtgta CD 1001 cgggtatatg ggacgaactc aaaaactgtt gctccccgtc ctcctgctgc CD 1051 gatgagtgga ttgattag FT EDITED CDNA CD 1 atggaagata ttatgagcac gattcgcata ttgttgccct tgcgtaagca CD 51 gattaccgga tattttgaca aaccgagcct ttctcttaat cgagattcta CD 101 ctaatgagtt cttaagcacc tttctaaaaa cttacatcga ggatattcat CD 151 gatttccatt tcatcgatga agatcctata gatcggggag aatcctcttt CD 201 atcattagac aagaagaata caacttatta cgaggctgat gcaagtgatg CD 251 aagaaatgga tataacagat gggatagagg gaatcatagg gggtactaat CD 301 cgaggccaca acggtggtgg cgacggtgaa gctctattca ttcaaataag CD 351 caggttactt atggaatata taaagtatta tatactcaac ataacacata CD 401 cctatgatgc tatgctaagc gagataccat ggtggatagc agatagtatc CD 451 cCcaaactct tatcgttagt atgtatacat tatatacttc gatttaatcc CD 501 tcttatctat atgggcaatc gatttgatat tatttataag gtgctgggct CD 551 cagtgggagc tggcctcaaa tctctcattc cgcaatctat agtagccatt CD 601 ttcatgcaag tttcaactcg tcattttgat gaaGggcatc gtaagtatct CD 651 ctacggtttc tttaatatac ttgtgtatta cggcatagga ttagttgttc CD 701 ggtactatat cacaccacac cttatacctg atttaggatt cttccgctta CD 751 caggttttga ctcatttatg tgacgagaat gcgggtgctt ctgttcccgc CD 801 tgctccgccc ttacctcaaa ggcgggcggg ggcgcgtttt ccaactatct CD 851 tattgccccc tgagcccaac gaacctcctc aatcgggggt cgggcgctca CD 901 gctactactc cgccagaacc gaaaacttcc acagcatgtt tggaagttgt CD 951 gaaagccctc ctgaatgggg ctgcccgggg gtgcaccggg agttggtgta CD 1001 cgggtatatg ggacgaactc aaaaactgtt gctccccgtc ctcctgctgc CD 1051 gatgagtgga ttgattag SQ SEQUENCE 356 AA; MEDIMSTIRI LLPLRKQITG YFDKPSLSLN RDSTNEFLST FLKTYIEDIH DFHFIDEDPI DRGESSLSLD KKNTTYYEAD ASDEEMDITD GIEGIIGGTN RGHNGGGDGE ALFIQISRLL MEYIKYYILN ITHTYDAMLS EIPWWIADSI PKLLSLVCIH YILRFNPLIY MGNRFDIIYK VLGSVGAGLK SLIPQSIVAI FMQVSTRHFD EGHRKYLYGF FNILVYYGIG LVVRYYITPH LIPDLGFFRL QVLTHLCDEN AGASVPAAPP LPQRRAGARF PTILLPPEPN EPPQSGVGRS ATTPPEPKTS TACLEVVKAL LNGAARGCTG SWCTGIWDEL KNCCSPSSCC DEWID* // ID AF536188_1 STANDARD; PRT; 356 AA. AC AF536188; DT Tue Jul 21 07:07:22 2009 DE Zea mays bicistronic S male sterility locus variant 2 mRNA, OS mitochondrion Zea mays OC Zea mays RN [1] RL Curr. Genet. 42 (3), 179-184 (2002) RL PUBMED 12491012 FT Full length CDS FT GENE : FT NOTE : ORF355 FT LOCUS_TAG : FT PROTEIN_ID : AAN40749.1 FT PROTEIN_NAME : unknown FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 1068 FT DIRECTIONS : positive FT EDITING : 106 G(ggT) -> G(ggC) FT CODON_START : 1 CL CDNALEN 1068 NT; CD 1 atggaagata ttatgagcac gattcgcata ttgttgccct tgcgtaagca CD 51 gattaccgga tattttgaca aaccgagcct ttctcttaat cgagattcta CD 101 ctaatgagtt cttaagcacc tttctaaaaa cttacatcga ggatattcat CD 151 gatttccatt tcatcgatga agatcctata gatcggggag aatcctcttt CD 201 atcattagac aagaagaata caacttatta cgaggctgat gcaagtgatg CD 251 aagaaatgga tataacagat gggatagagg gaatcatagg gggtactaat CD 301 cgaggccaca acggtggTgg cgacggtgaa gctctattca ttcaaataag CD 351 caggttactt atggaatata taaagtatta tatactcaac ataacacata CD 401 cctatgatgc tatgctaagc gagataccat ggtggatagc agatagtatc CD 451 ctcaaactct tatcgttagt atgtatacat tatatacttc gatttaatcc CD 501 tcttatctat atgggcaatc gatttgatat tatttataag gtgctgggct CD 551 cagtgggagc tggcctcaaa tctctcattc cgcaatctat agtagccatt CD 601 ttcatgcaag tttcaactcg tcattttgat gaaaggcatc gtaagtatct CD 651 ctacggtttc tttaatatac ttgtgtatta cggcatagga ttagttgttc CD 701 ggtactatat cacaccacac cttatacctg atttaggatt cttccgctta CD 751 caggttttga ctcatttatg tgacgagaat gcgggtgctt ctgttcccgc CD 801 tgctccgccc ttacctcaaa ggcgggcggg ggcgcgtttt ccaactatct CD 851 tattgccccc tgagcccaac gaacctcctc aatcgggggt cgggcgctca CD 901 gctactactc cgccagaacc gaaaacttcc acagcatgtt tggaagttgt CD 951 gaaagccctc ctgaatgggg ctgcccgggg gtgcaccggg agttggtgta CD 1001 cgggtatatg ggacgaactc aaaaactgtt gctccccgtc ctcctgctgc CD 1051 gatgagtgga ttgattag FT EDITED CDNA CD 1 atggaagata ttatgagcac gattcgcata ttgttgccct tgcgtaagca CD 51 gattaccgga tattttgaca aaccgagcct ttctcttaat cgagattcta CD 101 ctaatgagtt cttaagcacc tttctaaaaa cttacatcga ggatattcat CD 151 gatttccatt tcatcgatga agatcctata gatcggggag aatcctcttt CD 201 atcattagac aagaagaata caacttatta cgaggctgat gcaagtgatg CD 251 aagaaatgga tataacagat gggatagagg gaatcatagg gggtactaat CD 301 cgaggccaca acggtggCgg cgacggtgaa gctctattca ttcaaataag CD 351 caggttactt atggaatata taaagtatta tatactcaac ataacacata CD 401 cctatgatgc tatgctaagc gagataccat ggtggatagc agatagtatc CD 451 ctcaaactct tatcgttagt atgtatacat tatatacttc gatttaatcc CD 501 tcttatctat atgggcaatc gatttgatat tatttataag gtgctgggct CD 551 cagtgggagc tggcctcaaa tctctcattc cgcaatctat agtagccatt CD 601 ttcatgcaag tttcaactcg tcattttgat gaaaggcatc gtaagtatct CD 651 ctacggtttc tttaatatac ttgtgtatta cggcatagga ttagttgttc CD 701 ggtactatat cacaccacac cttatacctg atttaggatt cttccgctta CD 751 caggttttga ctcatttatg tgacgagaat gcgggtgctt ctgttcccgc CD 801 tgctccgccc ttacctcaaa ggcgggcggg ggcgcgtttt ccaactatct CD 851 tattgccccc tgagcccaac gaacctcctc aatcgggggt cgggcgctca CD 901 gctactactc cgccagaacc gaaaacttcc acagcatgtt tggaagttgt CD 951 gaaagccctc ctgaatgggg ctgcccgggg gtgcaccggg agttggtgta CD 1001 cgggtatatg ggacgaactc aaaaactgtt gctccccgtc ctcctgctgc CD 1051 gatgagtgga ttgattag SQ SEQUENCE 356 AA; MEDIMSTIRI LLPLRKQITG YFDKPSLSLN RDSTNEFLST FLKTYIEDIH DFHFIDEDPI DRGESSLSLD KKNTTYYEAD ASDEEMDITD GIEGIIGGTN RGHNGGGDGE ALFIQISRLL MEYIKYYILN ITHTYDAMLS EIPWWIADSI LKLLSLVCIH YILRFNPLIY MGNRFDIIYK VLGSVGAGLK SLIPQSIVAI FMQVSTRHFD ERHRKYLYGF FNILVYYGIG LVVRYYITPH LIPDLGFFRL QVLTHLCDEN AGASVPAAPP LPQRRAGARF PTILLPPEPN EPPQSGVGRS ATTPPEPKTS TACLEVVKAL LNGAARGCTG SWCTGIWDEL KNCCSPSSCC DEWID* // ID AF536188_2 STANDARD; PRT; 18 AA. AC AF536188; DT Tue Jul 21 07:07:22 2009 DE Zea mays bicistronic S male sterility locus variant 2 mRNA, OS mitochondrion Zea mays OC Zea mays RN [1] RL Curr. Genet. 42 (3), 179-184 (2002) RL PUBMED 12491012 FT Full length CDS FT GENE : FT NOTE : ORF77; truncated due to RNA editing as compared to FT LOCUS_TAG : FT PROTEIN_ID : AAN40750.1 FT PROTEIN_NAME : unknown FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1080 - 1133 FT DIRECTIONS : positive FT EDITING : 18 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 54 NT; CD 1 atgtttgcat cgtttgactc aatgatggcc tttctgatct cattcgtatt CD 51 cCga FT EDITED CDNA CD 1 atgtttgcat cgtttgactc aatgatggcc tttctgatct cattcgtatt CD 51 cTga SQ SEQUENCE 18 AA; MFASFDSMMA FLISFVF* // ID AF536189_1 STANDARD; PRT; 356 AA. AC AF536189; DT Tue Jul 21 07:07:22 2009 DE Zea mays bicistronic S male sterility locus variant 3 mRNA, OS mitochondrion Zea mays OC Zea mays RN [1] RL Curr. Genet. 42 (3), 179-184 (2002) RL PUBMED 12491012 FT Full length CDS FT GENE : FT NOTE : ORF355 FT LOCUS_TAG : FT PROTEIN_ID : AAN40751.1 FT PROTEIN_NAME : unknown FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 1068 FT DIRECTIONS : positive FT EDITING : 172 G(ggC) -> G(ggT) FT CODON_START : 1 CL CDNALEN 1068 NT; CD 1 atggaagata ttatgagcac gattcgcata ttgttgccct tgcgtaagca CD 51 gattaccgga tattttgaca aaccgagcct ttctcttaat cgagattcta CD 101 ctaatgagtt cttaagcacc tttctaaaaa cttacatcga ggatattcat CD 151 gatttccatt tcatcgatga agatcctata gatcggggag aatcctcttt CD 201 atcattagac aagaagaata caacttatta cgaggctgat gcaagtgatg CD 251 aagaaatgga tataacagat gggatagagg gaatcatagg gggtactaat CD 301 cgaggccaca acggtggtgg cgacggtgaa gctctattca ttcaaataag CD 351 caggttactt atggaatata taaagtatta tatactcaac ataacacata CD 401 cctatgatgc tatgctaagc gagataccat ggtggatagc agatagtatc CD 451 ctcaaactct tatcgttagt atgtatacat tatatacttc gatttaatcc CD 501 tcttatctat atgggCaatc gatttgatat tatttataag gtgctgggct CD 551 cagtgggagc tggcctcaaa tctctcattc cgcaatctat agtagccatt CD 601 ttcatgcaag tttcaactcg tcattttgat gaaaggcatc gtaagtatct CD 651 ctacggtttc tttaatatac ttgtgtatta cggcatagga ttagttgttc CD 701 ggtactatat cacaccacac cttatacctg atttaggatt cttccgctta CD 751 caggttttga ctcatttatg tgacgagaat gcgggtgctt ctgttcccgc CD 801 tgctccgccc ttacctcaaa ggcgggcggg ggcgcgtttt ccaactatct CD 851 tattgccccc tgagcccaac gaacctcctc aatcgggggt cgggcgctca CD 901 gctactactc cgccagaacc gaaaacttcc acagcatgtt tggaagttgt CD 951 gaaagccctc ctgaatgggg ctgcccgggg gtgcaccggg agttggtgta CD 1001 cgggtatatg ggacgaactc aaaaactgtt gctccccgtc ctcctgctgc CD 1051 gatgagtgga ttgattag FT EDITED CDNA CD 1 atggaagata ttatgagcac gattcgcata ttgttgccct tgcgtaagca CD 51 gattaccgga tattttgaca aaccgagcct ttctcttaat cgagattcta CD 101 ctaatgagtt cttaagcacc tttctaaaaa cttacatcga ggatattcat CD 151 gatttccatt tcatcgatga agatcctata gatcggggag aatcctcttt CD 201 atcattagac aagaagaata caacttatta cgaggctgat gcaagtgatg CD 251 aagaaatgga tataacagat gggatagagg gaatcatagg gggtactaat CD 301 cgaggccaca acggtggtgg cgacggtgaa gctctattca ttcaaataag CD 351 caggttactt atggaatata taaagtatta tatactcaac ataacacata CD 401 cctatgatgc tatgctaagc gagataccat ggtggatagc agatagtatc CD 451 ctcaaactct tatcgttagt atgtatacat tatatacttc gatttaatcc CD 501 tcttatctat atgggTaatc gatttgatat tatttataag gtgctgggct CD 551 cagtgggagc tggcctcaaa tctctcattc cgcaatctat agtagccatt CD 601 ttcatgcaag tttcaactcg tcattttgat gaaaggcatc gtaagtatct CD 651 ctacggtttc tttaatatac ttgtgtatta cggcatagga ttagttgttc CD 701 ggtactatat cacaccacac cttatacctg atttaggatt cttccgctta CD 751 caggttttga ctcatttatg tgacgagaat gcgggtgctt ctgttcccgc CD 801 tgctccgccc ttacctcaaa ggcgggcggg ggcgcgtttt ccaactatct CD 851 tattgccccc tgagcccaac gaacctcctc aatcgggggt cgggcgctca CD 901 gctactactc cgccagaacc gaaaacttcc acagcatgtt tggaagttgt CD 951 gaaagccctc ctgaatgggg ctgcccgggg gtgcaccggg agttggtgta CD 1001 cgggtatatg ggacgaactc aaaaactgtt gctccccgtc ctcctgctgc CD 1051 gatgagtgga ttgattag SQ SEQUENCE 356 AA; MEDIMSTIRI LLPLRKQITG YFDKPSLSLN RDSTNEFLST FLKTYIEDIH DFHFIDEDPI DRGESSLSLD KKNTTYYEAD ASDEEMDITD GIEGIIGGTN RGHNGGGDGE ALFIQISRLL MEYIKYYILN ITHTYDAMLS EIPWWIADSI LKLLSLVCIH YILRFNPLIY MGNRFDIIYK VLGSVGAGLK SLIPQSIVAI FMQVSTRHFD ERHRKYLYGF FNILVYYGIG LVVRYYITPH LIPDLGFFRL QVLTHLCDEN AGASVPAAPP LPQRRAGARF PTILLPPEPN EPPQSGVGRS ATTPPEPKTS TACLEVVKAL LNGAARGCTG SWCTGIWDEL KNCCSPSSCC DEWID* // ID AF536189_2 STANDARD; PRT; 18 AA. AC AF536189; DT Tue Jul 21 07:07:22 2009 DE Zea mays bicistronic S male sterility locus variant 3 mRNA, OS mitochondrion Zea mays OC Zea mays RN [1] RL Curr. Genet. 42 (3), 179-184 (2002) RL PUBMED 12491012 FT Full length CDS FT GENE : FT NOTE : ORF77; truncated due to RNA editing FT LOCUS_TAG : FT PROTEIN_ID : AAN40752.1 FT PROTEIN_NAME : unknown FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1080 - 1133 FT DIRECTIONS : positive FT EDITING : 18 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 54 NT; CD 1 atgtttgcat cgtttgactc aatgatggcc tttctgatct cattcgtatt CD 51 cCga FT EDITED CDNA CD 1 atgtttgcat cgtttgactc aatgatggcc tttctgatct cattcgtatt CD 51 cTga SQ SEQUENCE 18 AA; MFASFDSMMA FLISFVF* // ID AF536190_1 STANDARD; PRT; 356 AA. AC AF536190; DT Tue Jul 21 07:07:22 2009 DE Zea mays bicistronic S male sterility locus variant 4 mRNA, OS mitochondrion Zea mays OC Zea mays RN [1] RL Curr. Genet. 42 (3), 179-184 (2002) RL PUBMED 12491012 FT Full length CDS FT GENE : FT NOTE : ORF355 FT LOCUS_TAG : FT PROTEIN_ID : AAN40753.1 FT PROTEIN_NAME : unknown FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 1068 FT DIRECTIONS : positive FT EDITING : 309 T(aCt) -> I(aTt) FT CODON_START : 1 CL CDNALEN 1068 NT; CD 1 atggaagata ttatgagcac gattcgcata ttgttgccct tgcgtaagca CD 51 gattaccgga tattttgaca aaccgagcct ttctcttaat cgagattcta CD 101 ctaatgagtt cttaagcacc tttctaaaaa cttacatcga ggatattcat CD 151 gatttccatt tcatcgatga agatcctata gatcggggag aatcctcttt CD 201 atcattagac aagaagaata caacttatta cgaggctgat gcaagtgatg CD 251 aagaaatgga tataacagat gggatagagg gaatcatagg gggtactaat CD 301 cgaggccaca acggtggtgg cgacggtgaa gctctattca ttcaaataag CD 351 caggttactt atggaatata taaagtatta tatactcaac ataacacata CD 401 cctatgatgc tatgctaagc gagataccat ggtggatagc agatagtatc CD 451 ctcaaactct tatcgttagt atgtatacat tatatacttc gatttaatcc CD 501 tcttatctat atgggcaatc gatttgatat tatttataag gtgctgggct CD 551 cagtgggagc tggcctcaaa tctctcattc cgcaatctat agtagccatt CD 601 ttcatgcaag tttcaactcg tcattttgat gaaaggcatc gtaagtatct CD 651 ctacggtttc tttaatatac ttgtgtatta cggcatagga ttagttgttc CD 701 ggtactatat cacaccacac cttatacctg atttaggatt cttccgctta CD 751 caggttttga ctcatttatg tgacgagaat gcgggtgctt ctgttcccgc CD 801 tgctccgccc ttacctcaaa ggcgggcggg ggcgcgtttt ccaactatct CD 851 tattgccccc tgagcccaac gaacctcctc aatcgggggt cgggcgctca CD 901 gctactactc cgccagaacc gaaaaCttcc acagcatgtt tggaagttgt CD 951 gaaagccctc ctgaatgggg ctgcccgggg gtgcaccggg agttggtgta CD 1001 cgggtatatg ggacgaactc aaaaactgtt gctccccgtc ctcctgctgc CD 1051 gatgagtgga ttgattag FT EDITED CDNA CD 1 atggaagata ttatgagcac gattcgcata ttgttgccct tgcgtaagca CD 51 gattaccgga tattttgaca aaccgagcct ttctcttaat cgagattcta CD 101 ctaatgagtt cttaagcacc tttctaaaaa cttacatcga ggatattcat CD 151 gatttccatt tcatcgatga agatcctata gatcggggag aatcctcttt CD 201 atcattagac aagaagaata caacttatta cgaggctgat gcaagtgatg CD 251 aagaaatgga tataacagat gggatagagg gaatcatagg gggtactaat CD 301 cgaggccaca acggtggtgg cgacggtgaa gctctattca ttcaaataag CD 351 caggttactt atggaatata taaagtatta tatactcaac ataacacata CD 401 cctatgatgc tatgctaagc gagataccat ggtggatagc agatagtatc CD 451 ctcaaactct tatcgttagt atgtatacat tatatacttc gatttaatcc CD 501 tcttatctat atgggcaatc gatttgatat tatttataag gtgctgggct CD 551 cagtgggagc tggcctcaaa tctctcattc cgcaatctat agtagccatt CD 601 ttcatgcaag tttcaactcg tcattttgat gaaaggcatc gtaagtatct CD 651 ctacggtttc tttaatatac ttgtgtatta cggcatagga ttagttgttc CD 701 ggtactatat cacaccacac cttatacctg atttaggatt cttccgctta CD 751 caggttttga ctcatttatg tgacgagaat gcgggtgctt ctgttcccgc CD 801 tgctccgccc ttacctcaaa ggcgggcggg ggcgcgtttt ccaactatct CD 851 tattgccccc tgagcccaac gaacctcctc aatcgggggt cgggcgctca CD 901 gctactactc cgccagaacc gaaaaTttcc acagcatgtt tggaagttgt CD 951 gaaagccctc ctgaatgggg ctgcccgggg gtgcaccggg agttggtgta CD 1001 cgggtatatg ggacgaactc aaaaactgtt gctccccgtc ctcctgctgc CD 1051 gatgagtgga ttgattag SQ SEQUENCE 356 AA; MEDIMSTIRI LLPLRKQITG YFDKPSLSLN RDSTNEFLST FLKTYIEDIH DFHFIDEDPI DRGESSLSLD KKNTTYYEAD ASDEEMDITD GIEGIIGGTN RGHNGGGDGE ALFIQISRLL MEYIKYYILN ITHTYDAMLS EIPWWIADSI LKLLSLVCIH YILRFNPLIY MGNRFDIIYK VLGSVGAGLK SLIPQSIVAI FMQVSTRHFD ERHRKYLYGF FNILVYYGIG LVVRYYITPH LIPDLGFFRL QVLTHLCDEN AGASVPAAPP LPQRRAGARF PTILLPPEPN EPPQSGVGRS ATTPPEPKIS TACLEVVKAL LNGAARGCTG SWCTGIWDEL KNCCSPSSCC DEWID* // ID AF536190_2 STANDARD; PRT; 18 AA. AC AF536190; DT Tue Jul 21 07:07:22 2009 DE Zea mays bicistronic S male sterility locus variant 4 mRNA, OS mitochondrion Zea mays OC Zea mays RN [1] RL Curr. Genet. 42 (3), 179-184 (2002) RL PUBMED 12491012 FT Full length CDS FT GENE : FT NOTE : ORF77; truncated due to RNA editing FT LOCUS_TAG : FT PROTEIN_ID : AAN40754.1 FT PROTEIN_NAME : unknown FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1080 - 1133 FT DIRECTIONS : positive FT EDITING : 18 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 54 NT; CD 1 atgtttgcat cgtttgactc aatgatggcc tttctgatct cattcgtatt CD 51 cCga FT EDITED CDNA CD 1 atgtttgcat cgtttgactc aatgatggcc tttctgatct cattcgtatt CD 51 cTga SQ SEQUENCE 18 AA; MFASFDSMMA FLISFVF* // ID AF536191_1 STANDARD; PRT; 356 AA. AC AF536191; DT Tue Jul 21 07:07:22 2009 DE Zea mays bicistronic S male sterility locus variant 5 mRNA, OS mitochondrion Zea mays OC Zea mays RN [1] RL Curr. Genet. 42 (3), 179-184 (2002) RL PUBMED 12491012 FT Full length CDS FT GENE : FT NOTE : ORF355 FT LOCUS_TAG : FT PROTEIN_ID : AAN40755.1 FT PROTEIN_NAME : unknown FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 1068 FT DIRECTIONS : positive FT EDITING : 244 D(gaT) -> D(gaC) FT CODON_START : 1 CL CDNALEN 1068 NT; CD 1 atggaagata ttatgagcac gattcgcata ttgttgccct tgcgtaagca CD 51 gattaccgga tattttgaca aaccgagcct ttctcttaat cgagattcta CD 101 ctaatgagtt cttaagcacc tttctaaaaa cttacatcga ggatattcat CD 151 gatttccatt tcatcgatga agatcctata gatcggggag aatcctcttt CD 201 atcattagac aagaagaata caacttatta cgaggctgat gcaagtgatg CD 251 aagaaatgga tataacagat gggatagagg gaatcatagg gggtactaat CD 301 cgaggccaca acggtggtgg cgacggtgaa gctctattca ttcaaataag CD 351 caggttactt atggaatata taaagtatta tatactcaac ataacacata CD 401 cctatgatgc tatgctaagc gagataccat ggtggatagc agatagtatc CD 451 ctcaaactct tatcgttagt atgtatacat tatatacttc gatttaatcc CD 501 tcttatctat atgggcaatc gatttgatat tatttataag gtgctgggct CD 551 cagtgggagc tggcctcaaa tctctcattc cgcaatctat agtagccatt CD 601 ttcatgcaag tttcaactcg tcattttgat gaaaggcatc gtaagtatct CD 651 ctacggtttc tttaatatac ttgtgtatta cggcatagga ttagttgttc CD 701 ggtactatat cacaccacac cttatacctg aTttaggatt cttccgctta CD 751 caggttttga ctcatttatg tgacgagaat gcgggtgctt ctgttcccgc CD 801 tgctccgccc ttacctcaaa ggcgggcggg ggcgcgtttt ccaactatct CD 851 tattgccccc tgagcccaac gaacctcctc aatcgggggt cgggcgctca CD 901 gctactactc cgccagaacc gaaaacttcc acagcatgtt tggaagttgt CD 951 gaaagccctc ctgaatgggg ctgcccgggg gtgcaccggg agttggtgta CD 1001 cgggtatatg ggacgaactc aaaaactgtt gctccccgtc ctcctgctgc CD 1051 gatgagtgga ttgattag FT EDITED CDNA CD 1 atggaagata ttatgagcac gattcgcata ttgttgccct tgcgtaagca CD 51 gattaccgga tattttgaca aaccgagcct ttctcttaat cgagattcta CD 101 ctaatgagtt cttaagcacc tttctaaaaa cttacatcga ggatattcat CD 151 gatttccatt tcatcgatga agatcctata gatcggggag aatcctcttt CD 201 atcattagac aagaagaata caacttatta cgaggctgat gcaagtgatg CD 251 aagaaatgga tataacagat gggatagagg gaatcatagg gggtactaat CD 301 cgaggccaca acggtggtgg cgacggtgaa gctctattca ttcaaataag CD 351 caggttactt atggaatata taaagtatta tatactcaac ataacacata CD 401 cctatgatgc tatgctaagc gagataccat ggtggatagc agatagtatc CD 451 ctcaaactct tatcgttagt atgtatacat tatatacttc gatttaatcc CD 501 tcttatctat atgggcaatc gatttgatat tatttataag gtgctgggct CD 551 cagtgggagc tggcctcaaa tctctcattc cgcaatctat agtagccatt CD 601 ttcatgcaag tttcaactcg tcattttgat gaaaggcatc gtaagtatct CD 651 ctacggtttc tttaatatac ttgtgtatta cggcatagga ttagttgttc CD 701 ggtactatat cacaccacac cttatacctg aCttaggatt cttccgctta CD 751 caggttttga ctcatttatg tgacgagaat gcgggtgctt ctgttcccgc CD 801 tgctccgccc ttacctcaaa ggcgggcggg ggcgcgtttt ccaactatct CD 851 tattgccccc tgagcccaac gaacctcctc aatcgggggt cgggcgctca CD 901 gctactactc cgccagaacc gaaaacttcc acagcatgtt tggaagttgt CD 951 gaaagccctc ctgaatgggg ctgcccgggg gtgcaccggg agttggtgta CD 1001 cgggtatatg ggacgaactc aaaaactgtt gctccccgtc ctcctgctgc CD 1051 gatgagtgga ttgattag SQ SEQUENCE 356 AA; MEDIMSTIRI LLPLRKQITG YFDKPSLSLN RDSTNEFLST FLKTYIEDIH DFHFIDEDPI DRGESSLSLD KKNTTYYEAD ASDEEMDITD GIEGIIGGTN RGHNGGGDGE ALFIQISRLL MEYIKYYILN ITHTYDAMLS EIPWWIADSI LKLLSLVCIH YILRFNPLIY MGNRFDIIYK VLGSVGAGLK SLIPQSIVAI FMQVSTRHFD ERHRKYLYGF FNILVYYGIG LVVRYYITPH LIPDLGFFRL QVLTHLCDEN AGASVPAAPP LPQRRAGARF PTILLPPEPN EPPQSGVGRS ATTPPEPKTS TACLEVVKAL LNGAARGCTG SWCTGIWDEL KNCCSPSSCC DEWID* // ID AF536191_2 STANDARD; PRT; 18 AA. AC AF536191; DT Tue Jul 21 07:07:22 2009 DE Zea mays bicistronic S male sterility locus variant 5 mRNA, OS mitochondrion Zea mays OC Zea mays RN [1] RL Curr. Genet. 42 (3), 179-184 (2002) RL PUBMED 12491012 FT Full length CDS FT GENE : FT NOTE : ORF77; truncated due to RNA editing FT LOCUS_TAG : FT PROTEIN_ID : AAN40756.1 FT PROTEIN_NAME : unknown FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1080 - 1133 FT DIRECTIONS : positive FT EDITING : 14 S(tCa) -> L(tTa) FT EDITING : 18 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 54 NT; CD 1 atgtttgcat cgtttgactc aatgatggcc tttctgatct Cattcgtatt CD 51 cCga FT EDITED CDNA CD 1 atgtttgcat cgtttgactc aatgatggcc tttctgatct Tattcgtatt CD 51 cTga SQ SEQUENCE 18 AA; MFASFDSMMA FLILFVF* // ID AJ000353_1 STANDARD; PRT; 216 AA. AC AJ000353; DT Tue Jul 21 07:07:22 2009 DE Taxus baccata coxI gene, partial. OS mitochondrion Taxus baccata (English yew) OC Taxus baccata RN [1] RL Plant Mol. Biol. 37 (2), 225-234 (1998) RL PUBMED 9617796 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA04028.1 FT PROTEIN_NAME : Cytochrome C oxidase subunit I FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 648 FT DIRECTIONS : positive FT EDITING : 5 P(CCt) -> F(TTt) FT EDITING : 20 P(cCc) -> L(cTc) FT EDITING : 21 P(CCt) -> F(TTt) FT EDITING : 24 L(Ctc) -> F(Ttc) FT EDITING : 34 P(cCg) -> L(cTg) FT EDITING : 39 I(atC) -> I(atT) FT EDITING : 65 T(aCt) -> I(aTt) FT EDITING : 71 L(ctC) -> L(ctT) FT EDITING : 72 V(gtC) -> V(gtT) FT EDITING : 89 H(CaC) -> Y(TaT) FT EDITING : 90 S(tCt) -> F(tTt) FT EDITING : 124 P(cCa) -> L(cTa) FT EDITING : 125 S(tCt) -> F(tTt) FT EDITING : 129 S(tCc) -> F(tTc) FT EDITING : 133 S(tCc) -> F(tTc) FT EDITING : 138 P(cCt) -> L(cTt) FT EDITING : 143 P(cCg) -> L(cTg) FT EDITING : 146 P(Ccc) -> S(Tcc) FT EDITING : 156 H(Cat) -> Y(Tat) FT EDITING : 162 P(CCc) -> F(TTc) FT EDITING : 166 L(ctC) -> L(ctT) FT EDITING : 167 P(Ccc) -> S(Tcc) FT EDITING : 174 S(tCa) -> L(tTa) FT EDITING : 180 S(tCc) -> F(tTc) FT EDITING : 181 R(Cgg) -> W(Tgg) FT EDITING : 194 S(tCa) -> L(tTa) FT EDITING : 200 R(Cgg) -> W(Tgg) FT EDITING : 210 L(Ctc) -> F(Ttc) FT EDITING : 216 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 648 NT; CD 1 tttaatacaa ccCCtttcga tcctgctgga gggggagacc cgatcttata CD 51 ccagcatcCc CCttggttcC tcggccatcc agaggtgtat atcctgattc CD 101 Cgcctggatt cggtatCatc agtcatatcg tatcgacttt ttcgggaaaa CD 151 ccggtcttcg ggtatctggg catggtttat gccatgatca gtaCtggtgt CD 201 tcttggattc ctCgtCtggg ctcatcacat gttcactgtg ggcctagacg CD 251 ttgatacgcg tgctCaCtCt accgcagcta ccatgatcat agctgtcccc CD 301 actggaatca aaatatttag ttggatcgct accatgtggg gaggttcgat CD 351 acgatacaaa acacctatgc CatCtgctgt agggtCcatc tttctgtCca CD 401 ccataggagg acCtactgga atagtccCgg cgaatCccgg gctagacatt CD 451 gctctgcatg atactCatta cgtggttgca catCCccatt atgtactCCc CD 501 catgggagcc gttttcgctt Cattcgcagg attttactCc Cgggtgggta CD 551 agatctctgg tcgaacatac cccgaaactt Caggtcaaat ccattttCgg CD 601 atcactttcg tcggggtgaa tttgaccCtc tttcccatgc atttctCg FT EDITED CDNA CD 1 tttaatacaa ccTTtttcga tcctgctgga gggggagacc cgatcttata CD 51 ccagcatcTc TTttggttcT tcggccatcc agaggtgtat atcctgattc CD 101 Tgcctggatt cggtatTatc agtcatatcg tatcgacttt ttcgggaaaa CD 151 ccggtcttcg ggtatctggg catggtttat gccatgatca gtaTtggtgt CD 201 tcttggattc ctTgtTtggg ctcatcacat gttcactgtg ggcctagacg CD 251 ttgatacgcg tgctTaTtTt accgcagcta ccatgatcat agctgtcccc CD 301 actggaatca aaatatttag ttggatcgct accatgtggg gaggttcgat CD 351 acgatacaaa acacctatgc TatTtgctgt agggtTcatc tttctgtTca CD 401 ccataggagg acTtactgga atagtccTgg cgaatTccgg gctagacatt CD 451 gctctgcatg atactTatta cgtggttgca catTTccatt atgtactTTc CD 501 catgggagcc gttttcgctt Tattcgcagg attttactTc Tgggtgggta CD 551 agatctctgg tcgaacatac cccgaaactt Taggtcaaat ccattttTgg CD 601 atcactttcg tcggggtgaa tttgaccTtc tttcccatgc atttctTg SQ SEQUENCE 216 AA; FNTTFFDPAG GGDPILYQHL FWFFGHPEVY ILILPGFGII SHIVSTFSGK PVFGYLGMVY AMISIGVLGF LVWAHHMFTV GLDVDTRAYF TAATMIIAVP TGIKIFSWIA TMWGGSIRYK TPMLFAVGFI FLFTIGGLTG IVLANSGLDI ALHDTYYVVA HFHYVLSMGA VFALFAGFYF WVGKISGRTY PETLGQIHFW ITFVGVNLTF FPMHFL // ID AJ000354_1 STANDARD; PRT; 216 AA. AC AJ000354; DT Tue Jul 21 07:07:22 2009 DE Pinus sylvestris coxI gene, partial. OS mitochondrion Pinus sylvestris (Scots pine) OC Pinus sylvestris RN [1] RL Plant Mol. Biol. 37 (2), 225-234 (1998) RL PUBMED 9617796 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA04029.1 FT PROTEIN_NAME : Cytochrome C oxidase subunit I FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 648 FT DIRECTIONS : positive FT EDITING : 22 R(Cgg) -> W(Tgg) FT EDITING : 24 S(tCc) -> F(tTc) FT EDITING : 32 P(cCc) -> L(cTc) FT EDITING : 56 P(cCa) -> L(cTa) FT EDITING : 68 P(cCt) -> L(cTt) FT EDITING : 71 P(cCt) -> L(cTt) FT EDITING : 73 R(Cgg) -> W(Tgg) FT EDITING : 82 S(tCa) -> L(tTa) FT EDITING : 89 H(Cac) -> Y(Tac) FT EDITING : 90 S(tCt) -> F(tTt) FT EDITING : 108 R(Cgg) -> W(Tgg) FT EDITING : 125 L(Ctt) -> F(Ttt) FT EDITING : 127 A(gCa) -> V(gTa) FT EDITING : 129 S(tCc) -> F(tTc) FT EDITING : 132 P(cCg) -> L(cTg) FT EDITING : 133 S(tCc) -> F(tTc) FT EDITING : 146 P(Cct) -> S(Tct) FT EDITING : 156 H(Cat) -> Y(Tat) FT EDITING : 162 S(tCc) -> F(tTc) FT EDITING : 172 S(tCt) -> F(tTt) FT EDITING : 174 S(tCa) -> L(tTa) FT EDITING : 175 S(tCt) -> F(tTt) FT EDITING : 179 H(Cac) -> Y(Tac) FT EDITING : 181 R(Cgg) -> W(Tgg) FT EDITING : 186 P(Cct) -> S(Tct) FT EDITING : 199 L(Ctt) -> F(Ttt) FT EDITING : 200 R(Cgg) -> W(Tgg) FT EDITING : 203 L(Ctt) -> F(Ttt) FT EDITING : 208 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 648 NT; CD 1 tttaatacaa cctttttcga tcctgctgga gggggagacc cgatattata CD 51 ccagcatctc tttCggttct Ccggtcatcc agaggtgtat attcCcattc CD 101 tgcccggatt cggtatcatt agtcatatcg tatcgacttt ttcgggaaaa CD 151 ccggtattcg ggtatcCagg catggtttat gccatgatca gtattggtgt CD 201 tcCtggattt cCtgttCggg ctcatcatat gtttactgtg ggctCagacg CD 251 ttgatacgcg tgctCactCt accgcagcta ccatgatcat agctgtcccc CD 301 actggaatca aaatctttag tCggatcgct accatgtggg gaggttcgat CD 351 acgatacaaa acacccatgt taCttgctgC agggtCcatc tttcCgtCca CD 401 ccataggagg actcactgga atagtcctgg caaatCctgg gctagacatt CD 451 gctctgcatg atactCatta tgtggttgca cattCccatt atgtactttc CD 501 tatgggagcc gtttCtgctt CatCtgcagg atttCacttc Cgggtgggta CD 551 aaatcCctgg tcgaacatac cctgaaactt taggtcaaat ccatCttCgg CD 601 atcactCttt tcggggtgaa ttCgaccttc tttcccatgc atttcttg FT EDITED CDNA CD 1 tttaatacaa cctttttcga tcctgctgga gggggagacc cgatattata CD 51 ccagcatctc tttTggttct Tcggtcatcc agaggtgtat attcTcattc CD 101 tgcccggatt cggtatcatt agtcatatcg tatcgacttt ttcgggaaaa CD 151 ccggtattcg ggtatcTagg catggtttat gccatgatca gtattggtgt CD 201 tcTtggattt cTtgttTggg ctcatcatat gtttactgtg ggctTagacg CD 251 ttgatacgcg tgctTactTt accgcagcta ccatgatcat agctgtcccc CD 301 actggaatca aaatctttag tTggatcgct accatgtggg gaggttcgat CD 351 acgatacaaa acacccatgt taTttgctgT agggtTcatc tttcTgtTca CD 401 ccataggagg actcactgga atagtcctgg caaatTctgg gctagacatt CD 451 gctctgcatg atactTatta tgtggttgca cattTccatt atgtactttc CD 501 tatgggagcc gtttTtgctt TatTtgcagg atttTacttc Tgggtgggta CD 551 aaatcTctgg tcgaacatac cctgaaactt taggtcaaat ccatTttTgg CD 601 atcactTttt tcggggtgaa ttTgaccttc tttcccatgc atttcttg SQ SEQUENCE 216 AA; FNTTFFDPAG GGDPILYQHL FWFFGHPEVY ILILPGFGII SHIVSTFSGK PVFGYLGMVY AMISIGVLGF LVWAHHMFTV GLDVDTRAYF TAATMIIAVP TGIKIFSWIA TMWGGSIRYK TPMLFAVGFI FLFTIGGLTG IVLANSGLDI ALHDTYYVVA HFHYVLSMGA VFALFAGFYF WVGKISGRTY PETLGQIHFW ITFFGVNLTF FPMHFL // ID AJ000355_1 STANDARD; PRT; 216 AA. AC AJ000355; DT Tue Jul 21 07:07:22 2009 DE Pinus sibirica coxI gene, partial. OS mitochondrion Pinus sibirica OC Pinus sibirica RN [1] RL Plant Mol. Biol. 37 (2), 225-234 (1998) RL PUBMED 9617796 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA04030.1 FT PROTEIN_NAME : Cytochrome C oxidase subunit I FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 648 FT DIRECTIONS : positive FT EDITING : 22 R(Cgg) -> W(Tgg) FT EDITING : 24 S(tCc) -> F(tTc) FT EDITING : 32 P(cCc) -> L(cTc) FT EDITING : 35 P(ccC) -> P(ccT) FT EDITING : 56 P(cCa) -> L(cTa) FT EDITING : 68 P(cCt) -> L(cTt) FT EDITING : 71 P(cCt) -> L(cTt) FT EDITING : 73 R(Cgg) -> W(Tgg) FT EDITING : 82 S(tCa) -> L(tTa) FT EDITING : 89 H(Cac) -> Y(Tac) FT EDITING : 90 S(tCt) -> F(tTt) FT EDITING : 108 R(Cgg) -> W(Tgg) FT EDITING : 125 L(Ctt) -> F(Ttt) FT EDITING : 127 A(gCa) -> V(gTa) FT EDITING : 129 S(tCc) -> F(tTc) FT EDITING : 132 P(cCg) -> L(cTg) FT EDITING : 133 S(tCc) -> F(tTc) FT EDITING : 146 P(Cct) -> S(Tct) FT EDITING : 156 H(Cat) -> Y(Tat) FT EDITING : 162 S(tCc) -> F(tTc) FT EDITING : 172 S(tCt) -> F(tTt) FT EDITING : 174 S(tCa) -> L(tTa) FT EDITING : 175 S(tCt) -> F(tTt) FT EDITING : 179 H(Cac) -> Y(Tac) FT EDITING : 181 R(Cgg) -> W(Tgg) FT EDITING : 186 P(Cct) -> S(Tct) FT EDITING : 199 L(Ctt) -> F(Ttt) FT EDITING : 200 R(Cgg) -> W(Tgg) FT EDITING : 203 L(Ctt) -> F(Ttt) FT EDITING : 208 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 648 NT; CD 1 tttaatacaa cctttttcga tcctgctgga gggggagacc cgatattata CD 51 ccagcatctc tttCggttct Ccggtcatcc agaggtgtat attcCcattc CD 101 tgccCggatt cggtatcatt agtcatatcg tatcgacttt ttcgggaaaa CD 151 ccggtattcg ggtatcCagg catggtttat gccatgatca gtattggtgt CD 201 tcCtggattt cCtgttCggg ctcatcatat gtttactgtg ggctCagacg CD 251 ttgatacgcg tgctCactCt accgcagcta ccatgatcat agctgtcccc CD 301 actggaatca aaatctttag tCggatcgct accatgtggg gaggttcgat CD 351 acgatacaaa acacccatgt taCttgctgC agggtCcatc tttcCgtCca CD 401 ccataggagg actcactgga atagtcctgg caaatCctgg gctagacatt CD 451 gctctgcatg atactCatta tgtggttgca cattCccatt atgtactttc CD 501 tatgggagcc gtttCtgctt CatCtgcagg atttCacttc Cgggtgggta CD 551 aaatcCctgg tcgaacatac cctgaaactt taggtcaaat ccatCttCgg CD 601 atcactCttt tcggggtgaa ttCgaccttc tttcccatgc atttcttg FT EDITED CDNA CD 1 tttaatacaa cctttttcga tcctgctgga gggggagacc cgatattata CD 51 ccagcatctc tttTggttct Tcggtcatcc agaggtgtat attcTcattc CD 101 tgccTggatt cggtatcatt agtcatatcg tatcgacttt ttcgggaaaa CD 151 ccggtattcg ggtatcTagg catggtttat gccatgatca gtattggtgt CD 201 tcTtggattt cTtgttTggg ctcatcatat gtttactgtg ggctTagacg CD 251 ttgatacgcg tgctTactTt accgcagcta ccatgatcat agctgtcccc CD 301 actggaatca aaatctttag tTggatcgct accatgtggg gaggttcgat CD 351 acgatacaaa acacccatgt taTttgctgT agggtTcatc tttcTgtTca CD 401 ccataggagg actcactgga atagtcctgg caaatTctgg gctagacatt CD 451 gctctgcatg atactTatta tgtggttgca cattTccatt atgtactttc CD 501 tatgggagcc gtttTtgctt TatTtgcagg atttTacttc Tgggtgggta CD 551 aaatcTctgg tcgaacatac cctgaaactt taggtcaaat ccatTttTgg CD 601 atcactTttt tcggggtgaa ttTgaccttc tttcccatgc atttcttg SQ SEQUENCE 216 AA; FNTTFFDPAG GGDPILYQHL FWFFGHPEVY ILILPGFGII SHIVSTFSGK PVFGYLGMVY AMISIGVLGF LVWAHHMFTV GLDVDTRAYF TAATMIIAVP TGIKIFSWIA TMWGGSIRYK TPMLFAVGFI FLFTIGGLTG IVLANSGLDI ALHDTYYVVA HFHYVLSMGA VFALFAGFYF WVGKISGRTY PETLGQIHFW ITFFGVNLTF FPMHFL // ID AJ000356_1 STANDARD; PRT; 216 AA. AC AJ000356; DT Tue Jul 21 07:07:22 2009 DE Picea abies coxI gene, partial. OS mitochondrion Picea abies (Norway spruce) OC Picea abies RN [1] RL Plant Mol. Biol. 37 (2), 225-234 (1998) RL PUBMED 9617796 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA04031.1 FT PROTEIN_NAME : Cytochrome C oxidase subunit I FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 648 FT DIRECTIONS : positive FT EDITING : 22 R(Cgg) -> W(Tgg) FT EDITING : 24 S(tCc) -> F(tTc) FT EDITING : 30 H(Cat) -> Y(Tat) FT EDITING : 32 P(cCc) -> L(cTc) FT EDITING : 34 P(cCg) -> L(cTg) FT EDITING : 35 P(ccC) -> P(ccT) FT EDITING : 48 P(Ccg) -> S(Tcg) FT EDITING : 56 P(cCa) -> L(cTa) FT EDITING : 68 P(cCt) -> L(cTt) FT EDITING : 73 R(Cgg) -> W(Tgg) FT EDITING : 82 S(tCa) -> L(tTa) FT EDITING : 89 H(Cac) -> Y(Tac) FT EDITING : 90 S(tCt) -> F(tTt) FT EDITING : 106 S(tCt) -> F(tTt) FT EDITING : 108 R(Cgg) -> W(Tgg) FT EDITING : 125 S(tCt) -> F(tTt) FT EDITING : 127 A(gCa) -> V(gTa) FT EDITING : 129 S(tCc) -> F(tTc) FT EDITING : 132 P(cCg) -> L(cTg) FT EDITING : 133 S(tCc) -> F(tTc) FT EDITING : 146 P(Cct) -> S(Tct) FT EDITING : 156 H(Cat) -> Y(Tat) FT EDITING : 162 S(tCc) -> F(tTc) FT EDITING : 174 S(tCa) -> L(tTa) FT EDITING : 175 S(tCt) -> F(tTt) FT EDITING : 178 S(tCt) -> F(tTt) FT EDITING : 179 H(Cac) -> Y(Tac) FT EDITING : 181 R(Cgg) -> W(Tgg) FT EDITING : 185 I(atC) -> I(atT) FT EDITING : 186 P(Cct) -> S(Tct) FT EDITING : 199 L(Ctt) -> F(Ttt) FT EDITING : 200 R(Cgg) -> W(Tgg) FT EDITING : 203 L(Ctt) -> F(Ttt) FT EDITING : 208 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 648 NT; CD 1 tttaatacaa cctttttcga tcctgctgga gggggagacc cgatattata CD 51 ccagcatctc tttCggttct Ccggtcatcc agaggtgCat attcCcattc CD 101 CgccCggatt cggtatcatt agtcatatcg tatcgacttt tCcgggaaaa CD 151 ccggtattcg ggtatcCagg catggtttat gccatgatca gtattggtgt CD 201 tcCtggattt cttgttCggg ctcatcatat gtttactgtg ggctCagacg CD 251 ttgatacgcg tgctCactCt accgcagcta ccatgatcat agctgtcccc CD 301 actggaatca aaatctCtag tCggatcgct accatgtggg gaggttcgat CD 351 acgatacaaa acacccatgt tatCtgctgC agggtCcatc tttcCgtCca CD 401 ccataggagg actcactgga atagtcctgg caaatCctgg gctagacatt CD 451 gctctgcatg atactCatta tgtggttgca cattCccatt atgtactttc CD 501 tatgggagcc gtttttgctt CatCtgcagg atCtCacttc Cgggtgggta CD 551 aaatCCctgg tcgaacatac cctgaaactt taggtcaaat ccatCttCgg CD 601 atcactCttt tcggggtgaa ttCgaccttc tttcccatgc atttcttg FT EDITED CDNA CD 1 tttaatacaa cctttttcga tcctgctgga gggggagacc cgatattata CD 51 ccagcatctc tttTggttct Tcggtcatcc agaggtgTat attcTcattc CD 101 TgccTggatt cggtatcatt agtcatatcg tatcgacttt tTcgggaaaa CD 151 ccggtattcg ggtatcTagg catggtttat gccatgatca gtattggtgt CD 201 tcTtggattt cttgttTggg ctcatcatat gtttactgtg ggctTagacg CD 251 ttgatacgcg tgctTactTt accgcagcta ccatgatcat agctgtcccc CD 301 actggaatca aaatctTtag tTggatcgct accatgtggg gaggttcgat CD 351 acgatacaaa acacccatgt tatTtgctgT agggtTcatc tttcTgtTca CD 401 ccataggagg actcactgga atagtcctgg caaatTctgg gctagacatt CD 451 gctctgcatg atactTatta tgtggttgca cattTccatt atgtactttc CD 501 tatgggagcc gtttttgctt TatTtgcagg atTtTacttc Tgggtgggta CD 551 aaatTTctgg tcgaacatac cctgaaactt taggtcaaat ccatTttTgg CD 601 atcactTttt tcggggtgaa ttTgaccttc tttcccatgc atttcttg SQ SEQUENCE 216 AA; FNTTFFDPAG GGDPILYQHL FWFFGHPEVY ILILPGFGII SHIVSTFSGK PVFGYLGMVY AMISIGVLGF LVWAHHMFTV GLDVDTRAYF TAATMIIAVP TGIKIFSWIA TMWGGSIRYK TPMLFAVGFI FLFTIGGLTG IVLANSGLDI ALHDTYYVVA HFHYVLSMGA VFALFAGFYF WVGKISGRTY PETLGQIHFW ITFFGVNLTF FPMHFL // ID AJ000357_1 STANDARD; PRT; 216 AA. AC AJ000357; DT Tue Jul 21 07:07:22 2009 DE Juniperus procera coxI gene, partial. OS mitochondrion Juniperus procera (African juniper) OC Juniperus procera RN [1] RL Plant Mol. Biol. 37 (2), 225-234 (1998) RL PUBMED 9617796 FT N-terminal not determined FT C-terminal not determined FT GENE : coxI FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA04032.1 FT PROTEIN_NAME : Cytochrome C oxidase subunit I FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 648 FT DIRECTIONS : positive FT EDITING : 5 L(Ctt) -> F(Ttt) FT EDITING : 20 P(cCc) -> L(cTc) FT EDITING : 21 P(CCt) -> F(TTt) FT EDITING : 48 P(Ccg) -> S(Tcg) FT EDITING : 77 T(aCg) -> M(aTg) FT EDITING : 82 P(cCa) -> L(cTa) FT EDITING : 89 H(CaC) -> Y(TaT) FT EDITING : 90 S(tCt) -> F(tTt) FT EDITING : 97 T(aCa) -> I(aTa) FT EDITING : 124 P(cCa) -> L(cTa) FT EDITING : 125 S(tCt) -> F(tTt) FT EDITING : 129 S(tCc) -> F(tTc) FT EDITING : 131 L(Ctt) -> F(Ttt) FT EDITING : 133 S(tCc) -> F(tTc) FT EDITING : 152 P(cCg) -> L(cTg) FT EDITING : 156 H(Cat) -> Y(Tat) FT EDITING : 157 Y(taC) -> Y(taT) FT EDITING : 162 S(tCc) -> F(tTc) FT EDITING : 167 P(CcC) -> S(TcT) FT EDITING : 172 F(ttC) -> F(ttT) FT EDITING : 175 F(ttC) -> F(ttT) FT EDITING : 181 R(Cgg) -> W(Tgg) FT EDITING : 200 R(Cgg) -> W(Tgg) FT EDITING : 210 P(CCc) -> F(TTc) FT CODON_START : 1 CL CDNALEN 648 NT; CD 1 tttaatacaa ccCttttcga tcctgctgga gggggagacc cgatcttata CD 51 ccagcatcCc CCttggttct tcggccatcc agaggtgtat attttgattc CD 101 tgcctggatt cggtatcatc agtcatatcg tatcgacttt tCcgggaaaa CD 151 ccggtcttcg ggtatctggg catggtttat gccatgataa gtattggtgt CD 201 tcttggattc cttgtttggg ctcatcataC gtttactgtg ggccCagacg CD 251 ttgatacgcg tgctCaCtCt accgcagcta ccatgatcaC agctgtcccc CD 301 actggaatca aaatctttag ttggatcgct accatgtggg gaggttcgat CD 351 acgatacaaa acacctatgc CatCtgctgt agggtCcatc CttctgtCca CD 401 ccataggagg acttactgga atagtcctgg cgaattccgg gctagacatt CD 451 gctcCgcatg atactCatta Cgtggttgca cattCccatt atgtacttCc CD 501 Catgggagcc gttttCgctt tattCgcagg attttacttc Cgggtgggta CD 551 agatctctgg tcgaacatac cccgaaactt taggtcaaat tcattttCgg CD 601 atcactttcg tcggggtgaa tttgaccCCc tttcccatgc atttcttg FT EDITED CDNA CD 1 tttaatacaa ccTttttcga tcctgctgga gggggagacc cgatcttata CD 51 ccagcatcTc TTttggttct tcggccatcc agaggtgtat attttgattc CD 101 tgcctggatt cggtatcatc agtcatatcg tatcgacttt tTcgggaaaa CD 151 ccggtcttcg ggtatctggg catggtttat gccatgataa gtattggtgt CD 201 tcttggattc cttgtttggg ctcatcataT gtttactgtg ggccTagacg CD 251 ttgatacgcg tgctTaTtTt accgcagcta ccatgatcaT agctgtcccc CD 301 actggaatca aaatctttag ttggatcgct accatgtggg gaggttcgat CD 351 acgatacaaa acacctatgc TatTtgctgt agggtTcatc TttctgtTca CD 401 ccataggagg acttactgga atagtcctgg cgaattccgg gctagacatt CD 451 gctcTgcatg atactTatta Tgtggttgca cattTccatt atgtacttTc CD 501 Tatgggagcc gttttTgctt tattTgcagg attttacttc Tgggtgggta CD 551 agatctctgg tcgaacatac cccgaaactt taggtcaaat tcattttTgg CD 601 atcactttcg tcggggtgaa tttgaccTTc tttcccatgc atttcttg SQ SEQUENCE 216 AA; FNTTFFDPAG GGDPILYQHL FWFFGHPEVY ILILPGFGII SHIVSTFSGK PVFGYLGMVY AMISIGVLGF LVWAHHMFTV GLDVDTRAYF TAATMIIAVP TGIKIFSWIA TMWGGSIRYK TPMLFAVGFI FLFTIGGLTG IVLANSGLDI ALHDTYYVVA HFHYVLSMGA VFALFAGFYF WVGKISGRTY PETLGQIHFW ITFVGVNLTF FPMHFL // ID AJ000697_1 STANDARD; PRT; 368 AA. AC AJ000697; DT Tue Jul 21 07:07:22 2009 DE Anthoceros husnotii mitochondrial nad5 gene, partial. OS mitochondrion Anthoceros husnotii OC Anthoceros husnotii RN [1] RL Plant Syst. Evol. 218, 179-192 (1999) FT N-terminal not determined FT C-terminal not determined FT GENE : nad5 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA04249.3 FT PROTEIN_NAME : NADH dehydrogenase subunit 5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 1105 FT DIRECTIONS : positive FT EDITING : 2 *(Tga) -> R(Cga) FT EDITING : 10 P(CCt) -> F(TTt) FT EDITING : 12 P(CCt) -> F(TTt) FT EDITING : 23 S(tCt) -> F(tTt) FT EDITING : 25 *(Taa) -> Q(Caa) FT EDITING : 37 L(tTa) -> S(tCa) FT EDITING : 40 S(tCa) -> L(tTa) FT EDITING : 47 *(Tga) -> R(Cga) FT EDITING : 49 *(Tag) -> Q(Cag) FT EDITING : 80 *(Taa) -> Q(Caa) FT EDITING : 81 I(aTa) -> T(aCa) FT EDITING : 126 F(tTt) -> S(tCt) FT EDITING : 128 *(Taa) -> Q(Caa) FT EDITING : 138 V(gTc) -> A(gCc) FT EDITING : 160 S(tCt) -> F(tTt) FT EDITING : 166 L(CTt) -> S(TCt) FT EDITING : 167 L(cTc) -> P(cCc) FT EDITING : 180 T(acC) -> T(acT) FT EDITING : 186 M(aTg) -> T(aCg) FT EDITING : 187 P(Cca) -> S(Tca) FT EDITING : 207 F(tTc) -> S(tCc) FT EDITING : 208 I(aTt) -> T(aCt) FT EDITING : 234 Y(Tat) -> H(Cat) FT EDITING : 241 P(cCc) -> L(cTc) FT EDITING : 242 S(tCt) -> F(tTt) FT EDITING : 247 P(Cca) -> S(Tca) FT EDITING : 256 *(Taa) -> Q(Caa) FT EDITING : 282 P(CCa) -> L(TTa) FT EDITING : 300 P(cCt) -> L(cTt) FT EDITING : 326 H(Cac) -> Y(Tac) FT EDITING : 327 F(tTc) -> S(tCc) FT EDITING : 344 *(Tga) -> R(Cga) FT EDITING : 348 *(Tga) -> R(Cga) FT EDITING : 359 L(cTt) -> P(cCt) FT CODON_START : 2 CL CDNALEN 1105 NT; CD 1 ctccTgattt atgtgttatt tatttattCC tactCCtttt atgctaatgc CD 51 tggttaccgg agataactCt attTaattat ttctaggatg ggagggagtc CD 101 ggtcttgctt TatatttgtC aattaatttt tggttcacgT gacttTaggc CD 151 aaataaagca gctatcaaag ctatgcttgt gaatcgagta ggtgactttg CD 201 gattagctct cgggattatg ggtggtttta ccctttttTa aaTagtagac CD 251 ttttctacta tttttgcttg tgctagtgcc ttctctgaac ccaaccattt CD 301 ttttcttttt tgtaatatga gatttcatgc tataactgtt atttgtattt CD 351 tactgttcat tggcgctgtt ggaaaatTtg caTaaatagg attgcatact CD 401 tggttacccg acgTcatgga gggtcccact ccagtatccg ctttgattca CD 451 tgcagctact atggtcacag caggcgtttC tatgatagcg aggtgcCTtc CD 501 Tcttatttga atactcacct aatgctttga ttgttgttac Ctctgtagga CD 551 gctatgaTgC cattttttgc ggcaaccaca ggaatattac agaacgattt CD 601 gaagagggtc atagcttatt TcaTttgtag tcaattaggc tatatgatct CD 651 ttgcttgcgg cattttcaac tattctgtta gcgtatttca cttgatgaat CD 701 Tatgcttttt ttaaagcatt acCctCtttg agtgcaggtC cagtgattca CD 751 tgccatgtcg gatgagTaag atatgcgtaa gatgggagga cttgcttccc CD 801 tgttaccctt tacctatgct atgatgctta taggcagctt atctCCaatc CD 851 ggatttcctt ttttaactgg attttattcc aaagatgtga ttctagagcC CD 901 tgcttacact aaatatacaa ttagtggtaa ctttgctttc tggttgggaa CD 951 gtgtctctgt cttcttcact tcttacCact Tctttcgctt acttttctta CD 1001 acatttttag caccaactaa ttcattcaag Tgagacatgt taTgatgtca CD 1051 tgatgcgccc attctcatgg caatccTttt aatctgtttg gcttttggaa CD 1101 gtatt FT EDITED CDNA CD 1 ctccCgattt atgtgttatt tatttattTT tactTTtttt atgctaatgc CD 51 tggttaccgg agataactTt attCaattat ttctaggatg ggagggagtc CD 101 ggtcttgctt CatatttgtT aattaatttt tggttcacgC gacttCaggc CD 151 aaataaagca gctatcaaag ctatgcttgt gaatcgagta ggtgactttg CD 201 gattagctct cgggattatg ggtggtttta ccctttttCa aaCagtagac CD 251 ttttctacta tttttgcttg tgctagtgcc ttctctgaac ccaaccattt CD 301 ttttcttttt tgtaatatga gatttcatgc tataactgtt atttgtattt CD 351 tactgttcat tggcgctgtt ggaaaatCtg caCaaatagg attgcatact CD 401 tggttacccg acgCcatgga gggtcccact ccagtatccg ctttgattca CD 451 tgcagctact atggtcacag caggcgtttT tatgatagcg aggtgcTCtc CD 501 Ccttatttga atactcacct aatgctttga ttgttgttac Ttctgtagga CD 551 gctatgaCgT cattttttgc ggcaaccaca ggaatattac agaacgattt CD 601 gaagagggtc atagcttatt CcaCttgtag tcaattaggc tatatgatct CD 651 ttgcttgcgg cattttcaac tattctgtta gcgtatttca cttgatgaat CD 701 Catgcttttt ttaaagcatt acTctTtttg agtgcaggtT cagtgattca CD 751 tgccatgtcg gatgagCaag atatgcgtaa gatgggagga cttgcttccc CD 801 tgttaccctt tacctatgct atgatgctta taggcagctt atctTTaatc CD 851 ggatttcctt ttttaactgg attttattcc aaagatgtga ttctagagcT CD 901 tgcttacact aaatatacaa ttagtggtaa ctttgctttc tggttgggaa CD 951 gtgtctctgt cttcttcact tcttacTact Cctttcgctt acttttctta CD 1001 acatttttag caccaactaa ttcattcaag Cgagacatgt taCgatgtca CD 1051 tgatgcgccc attctcatgg caatccCttt aatctgtttg gcttttggaa CD 1101 gtatt SQ SEQUENCE 368 AA; SRFMCYLFIF TFFMLMLVTG DNFIQLFLGW EGVGLASYLL INFWFTRLQA NKAAIKAMLV NRVGDFGLAL GIMGGFTLFQ TVDFSTIFAC ASAFSEPNHF FLFCNMRFHA ITVICILLFI GAVGKSAQIG LHTWLPDAME GPTPVSALIH AATMVTAGVF MIARCSPLFE YSPNALIVVT SVGAMTSFFA ATTGILQNDL KRVIAYSTCS QLGYMIFACG IFNYSVSVFH LMNHAFFKAL LFLSAGSVIH AMSDEQDMRK MGGLASLLPF TYAMMLIGSL SLIGFPFLTG FYSKDVILEL AYTKYTISGN FAFWLGSVSV FFTSYYSFRL LFLTFLAPTN SFKRDMLRCH DAPILMAIPL ICLAFGSI // ID AJ000698_1 STANDARD; PRT; 369 AA. AC AJ000698; DT Tue Jul 21 07:07:22 2009 DE Anthoceros punctatus mitochondrial nad5 gene, partial. OS mitochondrion Anthoceros punctatus OC Anthoceros punctatus RN [1] RL Plant Syst. Evol. 218, 179-192 (1999) FT N-terminal not determined FT C-terminal not determined FT GENE : nad5 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA04250.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 5 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 185/0 FT EDITING : 2 L(cTg) -> P(cCg) FT EDITING : 8 I(atT) -> I(atC) FT EDITING : 10 F(ttC) -> F(ttT) FT EDITING : 11 H(caT) -> H(caC) FT EDITING : 12 F(ttC) -> F(ttT) FT EDITING : 14 H(caC) -> H(caT) FT EDITING : 15 A(gCC) -> V(gTT) FT EDITING : 17 A(gcC) -> A(gcT) FT EDITING : 25 L(CTa) -> S(TCa) FT EDITING : 35 S(tcC) -> S(tcT) FT EDITING : 37 S(tCT) -> F(tTC) FT EDITING : 39 F(ttC) -> F(ttT) FT EDITING : 40 V(gtC) -> V(gtT) FT EDITING : 43 F(ttC) -> F(ttT) FT EDITING : 47 M(aTg) -> T(aCg) FT EDITING : 49 L(tTa) -> S(tCa) FT EDITING : 59 A(gcC) -> A(gcT) FT EDITING : 68 I(atC) -> I(atT) FT EDITING : 78 P(ccC) -> P(ccT) FT EDITING : 79 S(tCC) -> F(tTT) FT EDITING : 115 S(tCg) -> L(tTg) FT EDITING : 123 C(tgC) -> C(tgT) FT EDITING : 126 I(atT) -> I(atC) FT EDITING : 128 I(aTa) -> T(aCa) FT EDITING : 134 S(tCg) -> L(tTg) FT EDITING : 138 C(tgT) -> C(tgC) FT EDITING : 142 S(tcT) -> S(tcC) FT EDITING : 148 F(ttC) -> F(ttT) FT EDITING : 150 L(tTa) -> S(tCa) FT EDITING : 151 C(tgT) -> C(tgC) FT EDITING : 166 P(cCc) -> L(cTc) FT EDITING : 168 L(ctC) -> L(ctT) FT EDITING : 207 S(tCT) -> F(tTC) FT EDITING : 208 H(CaT) -> Y(TaC) FT EDITING : 212 I(atC) -> I(atT) FT EDITING : 234 L(tTa) -> S(tCa) FT EDITING : 237 S(tCt) -> F(tTt) FT EDITING : 242 S(tCC) -> F(tTT) FT EDITING : 256 V(gTa) -> A(gCa) FT EDITING : 292 S(tCa) -> L(tTa) FT EDITING : 293 S(tCc) -> F(tTc) FT EDITING : 298 S(tcC) -> S(tcT) FT EDITING : 322 P(cCt) -> L(cTt) FT EDITING : 326 P(cCa) -> L(cTa) FT EDITING : 359 P(ccT) -> P(ccC) FT CODON_START : 1 CL CDNALEN 1105 NT; CD 1 cctcTgattt atgtgttatt tatTtatttC caTttCtttc aCgCCaatgc CD 51 Cggttaccgg agataacttt atCTaactat ttctaggatg ggagggagtc CD 101 ggtcCtgctC TatattCgtC aattaattCt tggtttacaT gacttTaggc CD 151 aaataaagca gctatcaaag ctatgcCtgt gaatcgagta ggtgacttcg CD 201 gatCagctct tgggattatg ggtgttttta cccCtCCtca aacagtagac CD 251 ttttctacta tttttgcttg tgctagtgtc ttctccgaac ccaatcattt CD 301 ttttgttttt tgtaatatga gatttcatgc tataactgtt attCgtattt CD 351 tactgtttat tggcgctgCc ggaaaatTtg caTaaatagg attgcatact CD 401 Cggttacccg atgTcatgga aggtcTcact ccagtatccg cttCgattTa CD 451 tgTagctact atggtaacag caggcgtttt tatgatagcg aggtgcCctc CD 501 cctCatacga aaactcacct aatgctttga ttgttattac ttttgtagga CD 551 gctatgacgt cattctttgc ggcaaccaca ggaatattac agaacgattt CD 601 gaagagggtc atagcttatC TCaTttgtag tcaatCaggc tatatgatct CD 651 ttgcttgcgg catttccaac tattccgtta gcgtatatca tttgatgaat CD 701 TatgcttttC ttaaagcatt acttCCcttg agtgcaggtt cagtgattca CD 751 tgccatgtcg gatgagTaag atatgcgtaa gatgggagga cttgcttccc CD 801 tgttaccctt tacctatgct atgatgctta taggcagctt atctctaatc CD 851 ggatttccct ttttaactgg atttCatCcc aaagatgtga ttcCagaact CD 901 tgcttacact aaatatacca ttagtggtaa ctttgctttc tggttgggaa CD 951 gtgtctctgt cttcCttagt gcttacCact ccttccgctt actcttttta CD 1001 accttcttag caccaactaa ttccttcaag cgagacatct taggatgtca CD 1051 tgatgcgccc attctcatgg caatccTttt aatctgcttg gcttttggaa CD 1101 gtatt FT EDITED CDNA CD 1 cctcCgattt atgtgttatt tatCtatttT caCttTtttc aTgTTaatgc CD 51 Tggttaccgg agataacttt atTCaactat ttctaggatg ggagggagtc CD 101 ggtcTtgctT CatattTgtT aattaattTt tggtttacaC gacttCaggc CD 151 aaataaagca gctatcaaag ctatgcTtgt gaatcgagta ggtgacttcg CD 201 gatTagctct tgggattatg ggtgttttta cccTtTTtca aacagtagac CD 251 ttttctacta tttttgcttg tgctagtgtc ttctccgaac ccaatcattt CD 301 ttttgttttt tgtaatatga gatttcatgc tataactgtt attTgtattt CD 351 tactgtttat tggcgctgTc ggaaaatCtg caCaaatagg attgcatact CD 401 Tggttacccg atgCcatgga aggtcCcact ccagtatccg cttTgattCa CD 451 tgCagctact atggtaacag caggcgtttt tatgatagcg aggtgcTctc CD 501 cctTatacga aaactcacct aatgctttga ttgttattac ttttgtagga CD 551 gctatgacgt cattctttgc ggcaaccaca ggaatattac agaacgattt CD 601 gaagagggtc atagcttatT CTaCttgtag tcaatTaggc tatatgatct CD 651 ttgcttgcgg catttccaac tattccgtta gcgtatatca tttgatgaat CD 701 CatgcttttT ttaaagcatt acttTTcttg agtgcaggtt cagtgattca CD 751 tgccatgtcg gatgagCaag atatgcgtaa gatgggagga cttgcttccc CD 801 tgttaccctt tacctatgct atgatgctta taggcagctt atctctaatc CD 851 ggatttccct ttttaactgg atttTatTcc aaagatgtga ttcTagaact CD 901 tgcttacact aaatatacca ttagtggtaa ctttgctttc tggttgggaa CD 951 gtgtctctgt cttcTttagt gcttacTact ccttccgctt actcttttta CD 1001 accttcttag caccaactaa ttccttcaag cgagacatct taggatgtca CD 1051 tgatgcgccc attctcatgg caatccCttt aatctgcttg gcttttggaa CD 1101 gtatt SQ SEQUENCE 369 AA; PPIYVLFIYF HFFHVNAGYR R*LYSTISRM GGSRSCFIFV N*FLVYTTSG K*SSYQSYAC ESSR*LRISS WDYGCFYPFS NSRLFYYFCL C*CLLRTQSF FCFL*YEISC YNCYLYFTVY WRCRKICTNR IAYLVTRCHG RSHSSIRFDS CSYYGNSRRF YDSEVLSLIR KLT*CFDCYY FCRSYDVILC GNHRNITERF EEGHSLFYL* SIRLYDLCLR HFQLFR*RIS FDESCFF*SI TFLECRFSDS CHVG*ARYA* DGRTCFPVTL YLCYDAYRQL ISNRISLFNW ILFQRCDSRT CLH*IYH*W* LCFLVGKCLC LL*CLLLLPL TLFNLLSTN* FLQARHLRMS *CAHSHGNPF NLLGFWKYX // ID AJ002490_1 STANDARD; PRT; 513 AA. AC AJ002490; DT Tue Jul 21 07:07:22 2009 DE Arabidopsis thaliana plastid ndhB gene, exon 1 and joined CDS. OS chloroplast Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL Plant Physiol. 117, 718-718 (1998) FT Full length CDS FT GENE : ndhB FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA05498.1 FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 260/0 FT EDITING : 50 S(tCa) -> L(tTa) FT EDITING : 156 P(cCa) -> L(cTa) FT EDITING : 196 H(Cat) -> Y(Tat) FT EDITING : 249 S(tCt) -> F(tTt) FT EDITING : 277 S(tCa) -> L(tTa) FT EDITING : 279 S(tCa) -> L(tTa) FT EDITING : 419 H(Cat) -> Y(Tat) FT EDITING : 494 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1539 NT; CD 1 atgatctggc atgtacagaa tgaaaatttc attctcgatt ctacgagaat CD 51 ttttatgaaa gcctttcatt tgcttctctt cgatggaagt tttattttcc CD 101 cagaatgtat cctaattttt ggcctaattc ttcttctgat gatcgattCa CD 151 acctctgatc aaaaagatat accttggtta tatttcatct cttcaacaag CD 201 tttcgtaatg agcataacgg ccctattgtt ccgatggaga gaagaaccta CD 251 tgattagctt ttcaggaaat ttccaaacga acaatttcaa cgaaatcttt CD 301 caatttctta ttttactatg ttcaactctc tgtattcctc tatccgtaga CD 351 gtacattgaa tgtacagaaa tggctataac agagtttctg ttattcatat CD 401 taacagctac tctaggagga atgtttttat gtggtgctaa cgatttaata CD 451 actatctttg tagctcCaga atgtttcagt ttatgctcct acctattatc CD 501 tggatatacc aagaaagata tacgatctaa tgaggctact atgaaatatt CD 551 tactcatggg tggggcaagc tcttctattc tggttCatgg tttctcttgg CD 601 ctatatggtt catccggggg agagattgag cttcaagaaa tagtgaatgg CD 651 tcttatcaat acacaaatgt ataactcccc aggaatttca attgcgctta CD 701 tattcatcac tgtaggaatt gggttcaagc tttccctagc cccttCtcat CD 751 caatggactc ctgacgtata cgaaggatct cccactccag tcgttgcttt CD 801 tctttctgtt acttcgaaag tagctgcttC agcttCagcc actcgaattt CD 851 tcgatattcc tttttatttc tcatcaaatg aatggcatct tcttctggaa CD 901 atcctagcta ttcttagcat gatattcggg aatctcattg ctattactca CD 951 aacaagcatg aaacgtatgc ttgcatattc gtccataggt caaatcggat CD 1001 atgtaattat tggaataatt gttggagact caaatggtgg atatgcgagc CD 1051 atgataactt atatgctgtt ctatatcgcc atgaatctag gaacttttgc CD 1101 ttgcattata ttatttggtc tacgtaccgg aactgataac attcgagatt CD 1151 atgcaggatt atacacaaaa gatccttttt tggctctctc tttagctcta CD 1201 tgtctcttat ccctaggagg tcttcctcca ctagcaggtt tttttggaaa CD 1251 actcCattta ttctggtgtg gatggcaggc aggcctatat ttcttggttt CD 1301 caataggact ccttacgagc gttctttcta tctactatta tctaaaaata CD 1351 atcaagttat taatgactgg acgaaaccaa gaaataaccc ctcacatgcg CD 1401 aaattataga atatcccctt taagatcaaa caattccatc gaattgagta CD 1451 tgattgtatg tgtgatagca tctactatac Caggaatatc aatgaacccg CD 1501 attattgcga ttgctcagga tacccttttt agcttctag FT EDITED CDNA CD 1 atgatctggc atgtacagaa tgaaaatttc attctcgatt ctacgagaat CD 51 ttttatgaaa gcctttcatt tgcttctctt cgatggaagt tttattttcc CD 101 cagaatgtat cctaattttt ggcctaattc ttcttctgat gatcgattTa CD 151 acctctgatc aaaaagatat accttggtta tatttcatct cttcaacaag CD 201 tttcgtaatg agcataacgg ccctattgtt ccgatggaga gaagaaccta CD 251 tgattagctt ttcaggaaat ttccaaacga acaatttcaa cgaaatcttt CD 301 caatttctta ttttactatg ttcaactctc tgtattcctc tatccgtaga CD 351 gtacattgaa tgtacagaaa tggctataac agagtttctg ttattcatat CD 401 taacagctac tctaggagga atgtttttat gtggtgctaa cgatttaata CD 451 actatctttg tagctcTaga atgtttcagt ttatgctcct acctattatc CD 501 tggatatacc aagaaagata tacgatctaa tgaggctact atgaaatatt CD 551 tactcatggg tggggcaagc tcttctattc tggttTatgg tttctcttgg CD 601 ctatatggtt catccggggg agagattgag cttcaagaaa tagtgaatgg CD 651 tcttatcaat acacaaatgt ataactcccc aggaatttca attgcgctta CD 701 tattcatcac tgtaggaatt gggttcaagc tttccctagc cccttTtcat CD 751 caatggactc ctgacgtata cgaaggatct cccactccag tcgttgcttt CD 801 tctttctgtt acttcgaaag tagctgcttT agcttTagcc actcgaattt CD 851 tcgatattcc tttttatttc tcatcaaatg aatggcatct tcttctggaa CD 901 atcctagcta ttcttagcat gatattcggg aatctcattg ctattactca CD 951 aacaagcatg aaacgtatgc ttgcatattc gtccataggt caaatcggat CD 1001 atgtaattat tggaataatt gttggagact caaatggtgg atatgcgagc CD 1051 atgataactt atatgctgtt ctatatcgcc atgaatctag gaacttttgc CD 1101 ttgcattata ttatttggtc tacgtaccgg aactgataac attcgagatt CD 1151 atgcaggatt atacacaaaa gatccttttt tggctctctc tttagctcta CD 1201 tgtctcttat ccctaggagg tcttcctcca ctagcaggtt tttttggaaa CD 1251 actcTattta ttctggtgtg gatggcaggc aggcctatat ttcttggttt CD 1301 caataggact ccttacgagc gttctttcta tctactatta tctaaaaata CD 1351 atcaagttat taatgactgg acgaaaccaa gaaataaccc ctcacatgcg CD 1401 aaattataga atatcccctt taagatcaaa caattccatc gaattgagta CD 1451 tgattgtatg tgtgatagca tctactatac Taggaatatc aatgaacccg CD 1501 attattgcga ttgctcagga tacccttttt agcttctag SQ SEQUENCE 513 AA; MIWHVQNENF ILDSTRIFMK AFHLLLFDGS FIFPECILIF GLILLLMIDL TSDQKDIPWL YFISSTSFVM SITALLFRWR EEPMISFSGN FQTNNFNEIF QFLILLCSTL CIPLSVEYIE CTEMAITEFL LFILTATLGG MFLCGANDLI TIFVALECFS LCSYLLSGYT KKDIRSNEAT MKYLLMGGAS SSILVYGFSW LYGSSGGEIE LQEIVNGLIN TQMYNSPGIS IALIFITVGI GFKLSLAPFH QWTPDVYEGS PTPVVAFLSV TSKVAALALA TRIFDIPFYF SSNEWHLLLE ILAILSMIFG NLIAITQTSM KRMLAYSSIG QIGYVIIGII VGDSNGGYAS MITYMLFYIA MNLGTFACII LFGLRTGTDN IRDYAGLYTK DPFLALSLAL CLLSLGGLPP LAGFFGKLYL FWCGWQAGLY FLVSIGLLTS VLSIYYYLKI IKLLMTGRNQ EITPHMRNYR ISPLRSNNSI ELSMIVCVIA STILGISMNP IIAIAQDTLF SF* // ID AJ003130_1 STANDARD; PRT; 675 AA. AC AJ003130; DT Tue Jul 21 07:07:22 2009 DE Solanum tuberosum mitochondrial mat-r gene. OS mitochondrion Solanum tuberosum (potato) OC Solanum tuberosum RN [1] RL Curr. Genet. 33 (6), 420-428 (1998) RL PUBMED 9644205 FT N-terminal not determined FT GENE : mat-r FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA05884.1 FT PROTEIN_NAME : maturase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 255 - 2279 FT DIRECTIONS : positive FT EDITING : 2 S(tCg) -> L(tTg) FT EDITING : 81 P(Cca) -> S(Tca) FT EDITING : 95 P(CCc) -> F(TTc) FT EDITING : 125 P(cCa) -> L(cTa) FT EDITING : 154 S(tCg) -> L(tTg) FT EDITING : 397 A(gCa) -> V(gTa) FT EDITING : 576 S(tCc) -> F(tTc) FT EDITING : 583 P(cCt) -> L(cTt) FT EDITING : 594 Y(taC) -> Y(taT) FT EDITING : 602 H(Cac) -> Y(Tac) FT EDITING : 612 P(cCg) -> L(cTg) FT EDITING : 631 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 2025 NT; CD 1 gggtCgaagt ttagaccgct cacagtagtt ctacctatag aaaggatcat CD 51 gaaagaggcg atcagaatgg tactcgaatc catttacgat ctcgagtttc CD 101 cagacacatc gcacttccgc ccgggtcgag gcttccactc cgtcctaaga CD 151 cggatcaaag aagagtgggg aacctctcgc aggtttttgg aattcgacat CD 201 caggaagtgt tttcacacca tcgaccgaca tcgactcatc Ccaatcttta CD 251 aggaagagat cgacgatccc aagttctttt acCCcattca taaagtcttt CD 301 tccgccggac gactcgtagg aggtgagaag ggcccttact ccgtcccaca CD 351 cagtgtatta ctatcggccc tacCaggcaa catctaccta cacaagctcg CD 401 atcaggagat agggaggatc cgacagaagt acgaaattcc gattgttcag CD 451 agaataagat Cggttctatt aagaacaggt cgtattgatg accaagaaaa CD 501 gtcttccgaa gaagcaagct tcaacgctcc ccaagacaac agagccatca CD 551 ttgtggggag gttaaagagc atccaacgca aagcggcctt tcattccctt CD 601 gtttcgtcgt ggcacacccc ccccacaagc accccccggc tcagggggga CD 651 ccagaaaacg cctttcgttt tccacccttc gtcggccctt gccgccttcc CD 701 ttaacaagcc ctcgagcctc ctttgcgccg ccttcttcat agaagccgcc CD 751 gggtttaccc agaagtccga attctatggt agagaacgct gtaataataa CD 801 ttgggccatg agagactctt ttaagtattg caaaaggaag ggcccgctga CD 851 tagagctggg cggggaggcg atactagtta tcaggtcaga gagaggtctg CD 901 gcccgtaagc cgtccccctt aaaaacctat tacttaataa ggatttttta CD 951 cgcgcgatat gccgacaact tactactggg aatcgtgggt tccgtcgagc CD 1001 ttctcataga aatacaaaaa cgtatcgccc acttcctaca atctggcttg CD 1051 aacctttggg tagactctgc aggatcaaca accatagctg cacggagtgc CD 1101 ggtagaattc ctcggtacgg tcattcggga agtccctccg agggcgactc CD 1151 ccatacaatt cttgcgagag ctggagaagc gtctacgggC aaagcaccgt CD 1201 atccatataa cagcttgcca cctacgctcc gccatccatt ccaagtttag CD 1251 gaacctaggt aatagtatcc cgatcaaaga gctgacgaag gggatgagcg CD 1301 gaagagggag tctactggac gcggttcaac tagcggagac tcttggaaca CD 1351 gctggagtaa gaagtcccca agtgagcgtc ttatgggggg ccgtcaagca CD 1401 catacggcaa ggaccaaggg agatctcgtt gttgcatagc tcaggtcgga CD 1451 gcaaggtgcc atcggacgtt caacaggtag tctcacgatc gggcactcat CD 1501 gccccgacat tgtcattgta tactcccgcg ggtcggaagg cggcggggga CD 1551 aggaggggga cactgggcga gatctatcag cagcgaattc cccatacaaa CD 1601 tagaggcacc tatcaaaaag atacttcgaa ggcttcggga tcgaggtctc CD 1651 attagccgaa gaagaccctg gccaatccac gtggcctgct tgacaaacgt CD 1701 cagcgacgga gacatcgtaa attggtCcgc aggcatcgcg ataagtcCtc CD 1751 tgtcctacta caggtgctgc gacaaccttt aCcaagtccg aacgattgtc CD 1801 gacCaccaga tccgctggtc tgcaatattc acccCggccc acaagcacaa CD 1851 atcctcggcg cggaatataa tcctaaagta ctccaaagac tCaaatatag CD 1901 taaataaaga aggtggtaag acccttgcag agttccccaa cagcatagag CD 1951 cttgggaagc tcggatccgg tcaagatccg aacaacaatg agcactcaac CD 2001 tactagtaaa aggggagaaa gttga FT EDITED CDNA CD 1 gggtTgaagt ttagaccgct cacagtagtt ctacctatag aaaggatcat CD 51 gaaagaggcg atcagaatgg tactcgaatc catttacgat ctcgagtttc CD 101 cagacacatc gcacttccgc ccgggtcgag gcttccactc cgtcctaaga CD 151 cggatcaaag aagagtgggg aacctctcgc aggtttttgg aattcgacat CD 201 caggaagtgt tttcacacca tcgaccgaca tcgactcatc Tcaatcttta CD 251 aggaagagat cgacgatccc aagttctttt acTTcattca taaagtcttt CD 301 tccgccggac gactcgtagg aggtgagaag ggcccttact ccgtcccaca CD 351 cagtgtatta ctatcggccc tacTaggcaa catctaccta cacaagctcg CD 401 atcaggagat agggaggatc cgacagaagt acgaaattcc gattgttcag CD 451 agaataagat Tggttctatt aagaacaggt cgtattgatg accaagaaaa CD 501 gtcttccgaa gaagcaagct tcaacgctcc ccaagacaac agagccatca CD 551 ttgtggggag gttaaagagc atccaacgca aagcggcctt tcattccctt CD 601 gtttcgtcgt ggcacacccc ccccacaagc accccccggc tcagggggga CD 651 ccagaaaacg cctttcgttt tccacccttc gtcggccctt gccgccttcc CD 701 ttaacaagcc ctcgagcctc ctttgcgccg ccttcttcat agaagccgcc CD 751 gggtttaccc agaagtccga attctatggt agagaacgct gtaataataa CD 801 ttgggccatg agagactctt ttaagtattg caaaaggaag ggcccgctga CD 851 tagagctggg cggggaggcg atactagtta tcaggtcaga gagaggtctg CD 901 gcccgtaagc cgtccccctt aaaaacctat tacttaataa ggatttttta CD 951 cgcgcgatat gccgacaact tactactggg aatcgtgggt tccgtcgagc CD 1001 ttctcataga aatacaaaaa cgtatcgccc acttcctaca atctggcttg CD 1051 aacctttggg tagactctgc aggatcaaca accatagctg cacggagtgc CD 1101 ggtagaattc ctcggtacgg tcattcggga agtccctccg agggcgactc CD 1151 ccatacaatt cttgcgagag ctggagaagc gtctacgggT aaagcaccgt CD 1201 atccatataa cagcttgcca cctacgctcc gccatccatt ccaagtttag CD 1251 gaacctaggt aatagtatcc cgatcaaaga gctgacgaag gggatgagcg CD 1301 gaagagggag tctactggac gcggttcaac tagcggagac tcttggaaca CD 1351 gctggagtaa gaagtcccca agtgagcgtc ttatgggggg ccgtcaagca CD 1401 catacggcaa ggaccaaggg agatctcgtt gttgcatagc tcaggtcgga CD 1451 gcaaggtgcc atcggacgtt caacaggtag tctcacgatc gggcactcat CD 1501 gccccgacat tgtcattgta tactcccgcg ggtcggaagg cggcggggga CD 1551 aggaggggga cactgggcga gatctatcag cagcgaattc cccatacaaa CD 1601 tagaggcacc tatcaaaaag atacttcgaa ggcttcggga tcgaggtctc CD 1651 attagccgaa gaagaccctg gccaatccac gtggcctgct tgacaaacgt CD 1701 cagcgacgga gacatcgtaa attggtTcgc aggcatcgcg ataagtcTtc CD 1751 tgtcctacta caggtgctgc gacaaccttt aTcaagtccg aacgattgtc CD 1801 gacTaccaga tccgctggtc tgcaatattc acccTggccc acaagcacaa CD 1851 atcctcggcg cggaatataa tcctaaagta ctccaaagac tTaaatatag CD 1901 taaataaaga aggtggtaag acccttgcag agttccccaa cagcatagag CD 1951 cttgggaagc tcggatccgg tcaagatccg aacaacaatg agcactcaac CD 2001 tactagtaaa aggggagaaa gttga SQ SEQUENCE 675 AA; GLKFRPLTVV LPIERIMKEA IRMVLESIYD LEFPDTSHFR PGRGFHSVLR RIKEEWGTSR RFLEFDIRKC FHTIDRHRLI SIFKEEIDDP KFFYFIHKVF SAGRLVGGEK GPYSVPHSVL LSALLGNIYL HKLDQEIGRI RQKYEIPIVQ RIRLVLLRTG RIDDQEKSSE EASFNAPQDN RAIIVGRLKS IQRKAAFHSL VSSWHTPPTS TPRLRGDQKT PFVFHPSSAL AAFLNKPSSL LCAAFFIEAA GFTQKSEFYG RERCNNNWAM RDSFKYCKRK GPLIELGGEA ILVIRSERGL ARKPSPLKTY YLIRIFYARY ADNLLLGIVG SVELLIEIQK RIAHFLQSGL NLWVDSAGST TIAARSAVEF LGTVIREVPP RATPIQFLRE LEKRLRVKHR IHITACHLRS AIHSKFRNLG NSIPIKELTK GMSGRGSLLD AVQLAETLGT AGVRSPQVSV LWGAVKHIRQ GPREISLLHS SGRSKVPSDV QQVVSRSGTH APTLSLYTPA GRKAAGEGGG HWARSISSEF PIQIEAPIKK ILRRLRDRGL ISRRRPWPIH VACLTNVSDG DIVNWFAGIA ISLLSYYRCC DNLYQVRTIV DYQIRWSAIF TLAHKHKSSA RNIILKYSKD LNIVNKEGGK TLAEFPNSIE LGKLGSGQDP NNNEHSTTSK RGES* // ID AJ010976_1 STANDARD; PRT; 201 AA. AC AJ010976; DT Tue Jul 21 07:07:22 2009 DE Hordeum vulgare chloroplast mRNA for NADH dehydrogenase subunit A, OS chloroplast Hordeum vulgare OC Hordeum vulgare RN [1] RL Submitted (05-SEP-1998) Vogel J., Department of Biology (Genetics), FT N-terminal not determined FT C-terminal not determined FT GENE : ndhA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB59284.1 FT PROTEIN_NAME : NADH dehydrogenase subunit A FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 604 FT DIRECTIONS : positive FT EDITING : 85 S(tCa) -> L(tTa) FT EDITING : 115 S(tCa) -> L(tTa) FT CODON_START : 3 CL CDNALEN 604 NT; CD 1 aagctatagc agatgggact aaactacttt ttaaagaaga tattctgcca CD 51 tcgcgaggag atatttcttt atttagcatt ggaccttcta tagcagtcat CD 101 atcagtttta ttaagttttt tagttatccc tttgggatat cattttgttt CD 151 tagccgatct tagtattggt gtttttttat ggattgccat ttcaagtata CD 201 gctcctattg gtcttcttat ggcaggatat agctcaaata ataaatattc CD 251 tttttCaggc ggtctacgag ctgctgctca atccattagt tatgaaatac CD 301 cattaacttt ttgtgtgcta gcaatatctc tactatctaa cagttCaagt CD 351 acagttgata tagttgaagc acagtcaaaa tatggttttt ttggatggaa CD 401 tatttggcgt cagcctatag gctttctggt ttttttaatt tcttctttgg CD 451 cagaatgtga aagattaccc tttgatttac cagaagcaga ggaagaatta CD 501 gtagcaggtt accaaactga atattccggt atcaaatatg gtttatttta CD 551 tcttgtttct tacctaaatt tattagtttc ttctttattt gtaacagttc CD 601 tcta FT EDITED CDNA CD 1 aagctatagc agatgggact aaactacttt ttaaagaaga tattctgcca CD 51 tcgcgaggag atatttcttt atttagcatt ggaccttcta tagcagtcat CD 101 atcagtttta ttaagttttt tagttatccc tttgggatat cattttgttt CD 151 tagccgatct tagtattggt gtttttttat ggattgccat ttcaagtata CD 201 gctcctattg gtcttcttat ggcaggatat agctcaaata ataaatattc CD 251 tttttTaggc ggtctacgag ctgctgctca atccattagt tatgaaatac CD 301 cattaacttt ttgtgtgcta gcaatatctc tactatctaa cagttTaagt CD 351 acagttgata tagttgaagc acagtcaaaa tatggttttt ttggatggaa CD 401 tatttggcgt cagcctatag gctttctggt ttttttaatt tcttctttgg CD 451 cagaatgtga aagattaccc tttgatttac cagaagcaga ggaagaatta CD 501 gtagcaggtt accaaactga atattccggt atcaaatatg gtttatttta CD 551 tcttgtttct tacctaaatt tattagtttc ttctttattt gtaacagttc CD 601 tcta SQ SEQUENCE 201 AA; AIADGTKLLF KEDILPSRGD ISLFSIGPSI AVISVLLSFL VIPLGYHFVL ADLSIGVFLW IAISSIAPIG LLMAGYSSNN KYSFLGGLRA AAQSISYEIP LTFCVLAISL LSNSLSTVDI VEAQSKYGFF GWNIWRQPIG FLVFLISSLA ECERLPFDLP EAEEELVAGY QTEYSGIKYG LFYLVSYLNL LVSSLFVTVL X // ID AJ011848_3 STANDARD; PRT; 363 AA. AC AJ011848; DT Tue Jul 21 07:07:22 2009 DE Hordeum vulgare chloroplast rps15 (partial), ndhH, ndhI, ndhG, OS chloroplast Hordeum vulgare subsp. vulgare (domesticated barley) OC Hordeum vulgare subsp. vulgare RN [1] RL Nucleic Acids Res. 28 (5), 1092-1098 (2000) RL PUBMED 10666448 FT Full length CDS FT GENE : ndhA FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA09812.1 FT PROTEIN_NAME : NADH dehydrogenase ND1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 184/1 FT EDITING : 17 S(tCg) -> L(tTg) FT EDITING : 158 S(tCa) -> L(tTa) FT EDITING : 188 S(tCa) -> L(tTa) FT EDITING : 357 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 1089 NT; CD 1 atgataatag atagggtaga ggtagaaact atcaattctt tttcgaaatC CD 51 ggaattatta aaagaagtct atggactgat atcgattcta cccattttga CD 101 ccctcctttt aggaattaca atagaggtac tcgtaattgt gtggttagaa CD 151 agagaaatat ctgcgtcgat acaacaacgt attggtcctg aatatgctgg CD 201 ccccctgggc ctgcttcaag ctatagcaga tgggactaaa ctacttttta CD 251 aagaagatat tctgccatcg cgaggagata tttctttatt tagcattgga CD 301 ccttctatag cagtcatatc agttttatta agttttttag ttatcccttt CD 351 gggatatcat tttgttttag ccgatcttag tattggtgtt tttttatgga CD 401 ttgccatttc aagtatagct cctattggtc ttcttatggc aggatatagc CD 451 tcaaataata aatattcttt ttCaggcggt ctacgagctg ctgctcaatc CD 501 cattagttat gaaataccat taactttttg tgtgctagca atatctctac CD 551 tatctaacag ttCaagtaca gttgatatag ttgaagcaca gtcaaaatat CD 601 ggtttttttg gatggaatat ttggcgtcag cctataggct ttctggtttt CD 651 tttaatttct tctttggcag aatgtgaaag attacccttt gatttaccag CD 701 aagcagagga agaattagta gcaggttacc aaactgaata ttccggtatc CD 751 aaatatggtt tattttatct tgtttcttac ctaaatttat tagtttcttc CD 801 tttatttgta acagttctct acttgggcgg gtggaatttc tctattccct CD 851 atatatcctt ttttgatttt ttccaaatga ataaagcagt tggaattttg CD 901 gaaatgacaa tgggtatatt tattacatta actaaagctt atttatttct CD 951 cttcatttct atcacaataa gatggacttt accaaggatg agaatggatc CD 1001 agttattaaa tcttggatgg aaatttcttt tacctatttc cctgggcaat CD 1051 ctattattaa caacctcttC tcaacttgtt tcactataa FT EDITED CDNA CD 1 atgataatag atagggtaga ggtagaaact atcaattctt tttcgaaatT CD 51 ggaattatta aaagaagtct atggactgat atcgattcta cccattttga CD 101 ccctcctttt aggaattaca atagaggtac tcgtaattgt gtggttagaa CD 151 agagaaatat ctgcgtcgat acaacaacgt attggtcctg aatatgctgg CD 201 ccccctgggc ctgcttcaag ctatagcaga tgggactaaa ctacttttta CD 251 aagaagatat tctgccatcg cgaggagata tttctttatt tagcattgga CD 301 ccttctatag cagtcatatc agttttatta agttttttag ttatcccttt CD 351 gggatatcat tttgttttag ccgatcttag tattggtgtt tttttatgga CD 401 ttgccatttc aagtatagct cctattggtc ttcttatggc aggatatagc CD 451 tcaaataata aatattcttt ttTaggcggt ctacgagctg ctgctcaatc CD 501 cattagttat gaaataccat taactttttg tgtgctagca atatctctac CD 551 tatctaacag ttTaagtaca gttgatatag ttgaagcaca gtcaaaatat CD 601 ggtttttttg gatggaatat ttggcgtcag cctataggct ttctggtttt CD 651 tttaatttct tctttggcag aatgtgaaag attacccttt gatttaccag CD 701 aagcagagga agaattagta gcaggttacc aaactgaata ttccggtatc CD 751 aaatatggtt tattttatct tgtttcttac ctaaatttat tagtttcttc CD 801 tttatttgta acagttctct acttgggcgg gtggaatttc tctattccct CD 851 atatatcctt ttttgatttt ttccaaatga ataaagcagt tggaattttg CD 901 gaaatgacaa tgggtatatt tattacatta actaaagctt atttatttct CD 951 cttcatttct atcacaataa gatggacttt accaaggatg agaatggatc CD 1001 agttattaaa tcttggatgg aaatttcttt tacctatttc cctgggcaat CD 1051 ctattattaa caacctcttT tcaacttgtt tcactataa SQ SEQUENCE 363 AA; MIIDRVEVET INSFSKLELL KEVYGLISIL PILTLLLGIT IEVLVIVWLE REISASIQQR IGPEYAGPLG LLQAIADGTK LLFKEDILPS RGDISLFSIG PSIAVISVLL SFLVIPLGYH FVLADLSIGV FLWIAISSIA PIGLLMAGYS SNNKYSFLGG LRAAAQSISY EIPLTFCVLA ISLLSNSLST VDIVEAQSKY GFFGWNIWRQ PIGFLVFLIS SLAECERLPF DLPEAEEELV AGYQTEYSGI KYGLFYLVSY LNLLVSSLFV TVLYLGGWNF SIPYISFFDF FQMNKAVGIL EMTMGIFITL TKAYLFLFIS ITIRWTLPRM RMDQLLNLGW KFLLPISLGN LLLTTSFQLV SL* // ID AJ011848_8 STANDARD; PRT; 501 AA. AC AJ011848; DT Tue Jul 21 07:07:22 2009 DE Hordeum vulgare chloroplast rps15 (partial), ndhH, ndhI, ndhG, OS chloroplast Hordeum vulgare subsp. vulgare (domesticated barley) OC Hordeum vulgare subsp. vulgare RN [1] RL Nucleic Acids Res. 28 (5), 1092-1098 (2000) RL PUBMED 10666448 FT Full length CDS FT GENE : ndhD FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA09817.1 FT PROTEIN_NAME : ndhD gene product FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 6410 - 7912 FT DIRECTIONS : positive FT EDITING : 293 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1503 NT; CD 1 atgagttatt ttccttggtt aacaatactt gttgttttgc cgatatttgc CD 51 cggttcatta attttctttt tacctcataa gggaaacaaa atcgttaggt CD 101 ggtatactat atctatttgt ttattagaat tccttctaat gacttatgcg CD 151 ttctgttatc atttccaact ggaggatccc ttaattcaat taaaggagga CD 201 ttataaatgg atagatgtct tcgatttcca ttggagattg ggaatcgatg CD 251 gactttcatt aggatccatt ttattgacag gatttatcac tactttagct CD 301 actttagcag cttggccaat tacacggaat tcgcgattat tctatttcct CD 351 gatgctcgca atgtatagtg gtcaaatagg attattttct tcgcgagacc CD 401 ttttactttt ttttatcatg tgggagttag aattaattcc tgtttactta CD 451 cttttatcca tgtggggggg aaagaggcgt ctatattcag ctacaaagtt CD 501 tattttgtat actgcaggcg gttctatttt tttcttaatc ggagttctgg CD 551 gtatgggctt atacggttcc aacgaaccag gattagattt ggaaagatta CD 601 attaatcaat cataccccgc aaccttggaa atacttttat attttggctt CD 651 ccttattgct tatgctgtca aattgccgat tataccccta catacgtggt CD 701 taccagatac ccatggggaa gcacattata gtacatgtat gcttttagcg CD 751 ggaatattat taaagatggg agcatatgga ttgattcgga tcaacatgga CD 801 attgttacct catgctcatt atctattttc gccctggtta gtaataatag CD 851 gagctatcca aataatctat gcagcttCaa cttctcttgg tcaacgaaat CD 901 ttcaaaaaaa gaatagctta ttcctctgta tctcacatgg gtttcataat CD 951 tataggaatt ggttccataa ccaacattgg actcaatgga gctattttac CD 1001 aaatattatc ccatggattt attggtgcta cacttttttt cttggcagga CD 1051 accgcttctg atagaatgcg tcttgtttat ctcgaagaac tgggaggaat CD 1101 atctatccca atgcctaaaa tttttaccat gtttagtagc ttttcaatgg CD 1151 cttctcttgc cttaccagga atgagtggtt ttgtcgcaga attagtagta CD 1201 ttttttggac taattactag tccaaaattt ttgttaatgc caaaagcact CD 1251 aattactttt gtaatggcaa ttggaatgat attaactcct atttatttat CD 1301 tatctatgtt acgccagatg ttctatggat acaagctatt taatgttcca CD 1351 aacctatgtt acgccagatg ttctatggat acaagctatt taatgttcca CD 1401 aaccttttta ccagtaatag gaattggtat ttatccagat tttgttctct CD 1451 ccctatccgt tgacagggta gaggctctct tatccaatta ttatcctaaa CD 1501 tag FT EDITED CDNA CD 1 atgagttatt ttccttggtt aacaatactt gttgttttgc cgatatttgc CD 51 cggttcatta attttctttt tacctcataa gggaaacaaa atcgttaggt CD 101 ggtatactat atctatttgt ttattagaat tccttctaat gacttatgcg CD 151 ttctgttatc atttccaact ggaggatccc ttaattcaat taaaggagga CD 201 ttataaatgg atagatgtct tcgatttcca ttggagattg ggaatcgatg CD 251 gactttcatt aggatccatt ttattgacag gatttatcac tactttagct CD 301 actttagcag cttggccaat tacacggaat tcgcgattat tctatttcct CD 351 gatgctcgca atgtatagtg gtcaaatagg attattttct tcgcgagacc CD 401 ttttactttt ttttatcatg tgggagttag aattaattcc tgtttactta CD 451 cttttatcca tgtggggggg aaagaggcgt ctatattcag ctacaaagtt CD 501 tattttgtat actgcaggcg gttctatttt tttcttaatc ggagttctgg CD 551 gtatgggctt atacggttcc aacgaaccag gattagattt ggaaagatta CD 601 attaatcaat cataccccgc aaccttggaa atacttttat attttggctt CD 651 ccttattgct tatgctgtca aattgccgat tataccccta catacgtggt CD 701 taccagatac ccatggggaa gcacattata gtacatgtat gcttttagcg CD 751 ggaatattat taaagatggg agcatatgga ttgattcgga tcaacatgga CD 801 attgttacct catgctcatt atctattttc gccctggtta gtaataatag CD 851 gagctatcca aataatctat gcagcttTaa cttctcttgg tcaacgaaat CD 901 ttcaaaaaaa gaatagctta ttcctctgta tctcacatgg gtttcataat CD 951 tataggaatt ggttccataa ccaacattgg actcaatgga gctattttac CD 1001 aaatattatc ccatggattt attggtgcta cacttttttt cttggcagga CD 1051 accgcttctg atagaatgcg tcttgtttat ctcgaagaac tgggaggaat CD 1101 atctatccca atgcctaaaa tttttaccat gtttagtagc ttttcaatgg CD 1151 cttctcttgc cttaccagga atgagtggtt ttgtcgcaga attagtagta CD 1201 ttttttggac taattactag tccaaaattt ttgttaatgc caaaagcact CD 1251 aattactttt gtaatggcaa ttggaatgat attaactcct atttatttat CD 1301 tatctatgtt acgccagatg ttctatggat acaagctatt taatgttcca CD 1351 aacctatgtt acgccagatg ttctatggat acaagctatt taatgttcca CD 1401 aaccttttta ccagtaatag gaattggtat ttatccagat tttgttctct CD 1451 ccctatccgt tgacagggta gaggctctct tatccaatta ttatcctaaa CD 1501 tag SQ SEQUENCE 501 AA; MSYFPWLTIL VVLPIFAGSL IFFLPHKGNK IVRWYTISIC LLEFLLMTYA FCYHFQLEDP LIQLKEDYKW IDVFDFHWRL GIDGLSLGSI LLTGFITTLA TLAAWPITRN SRLFYFLMLA MYSGQIGLFS SRDLLLFFIM WELELIPVYL LLSMWGGKRR LYSATKFILY TAGGSIFFLI GVLGMGLYGS NEPGLDLERL INQSYPATLE ILLYFGFLIA YAVKLPIIPL HTWLPDTHGE AHYSTCMLLA GILLKMGAYG LIRINMELLP HAHYLFSPWL VIIGAIQIIY AALTSLGQRN FKKRIAYSSV SHMGFIIIGI GSITNIGLNG AILQILSHGF IGATLFFLAG TASDRMRLVY LEELGGISIP MPKIFTMFSS FSMASLALPG MSGFVAELVV FFGLITSPKF LLMPKALITF VMAIGMILTP IYLLSMLRQM FYGYKLFNVP NLCYARCSMD TSYLMFQTFL PVIGIGIYPD FVLSLSVDRV EALLSNYYPK * // ID AJ130891_1 STANDARD; PRT; 84 AA. AC AJ130891; DT Tue Jul 21 07:07:23 2009 DE Ginkgo biloba chloroplast psbE, psbF, psbL and psbJ genes. OS chloroplast Ginkgo biloba (maidenhair tree) OC Ginkgo biloba RN [1] RL Unpublished FT Full length CDS FT GENE : psbE FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB61491.1 FT PROTEIN_NAME : cytochrome b559 alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 3 - 254 FT DIRECTIONS : positive FT EDITING : 72 P(Ccg) -> S(Tcg) FT CODON_START : 1 CL CDNALEN 252 NT; CD 1 atgtctggga atacgggaga acgctccttt gctgacatta ttaccagtat CD 51 tcgatactgg gttatccata gcattactat accttcccta ttcattgcag CD 101 gttggttatt tgtcagcaca ggtttggctt atgatgtgtt cgggagccct CD 151 cggccgaacg agtatttcac agatagccga caggaggttc cattaataac CD 201 tggccgtttc gatCcgttag aacaactcga cgaatttact agatcttttt CD 251 ag FT EDITED CDNA CD 1 atgtctggga atacgggaga acgctccttt gctgacatta ttaccagtat CD 51 tcgatactgg gttatccata gcattactat accttcccta ttcattgcag CD 101 gttggttatt tgtcagcaca ggtttggctt atgatgtgtt cgggagccct CD 151 cggccgaacg agtatttcac agatagccga caggaggttc cattaataac CD 201 tggccgtttc gatTcgttag aacaactcga cgaatttact agatcttttt CD 251 ag SQ SEQUENCE 84 AA; MSGNTGERSF ADIITSIRYW VIHSITIPSL FIAGWLFVST GLAYDVFGSP RPNEYFTDSR QEVPLITGRF DSLEQLDEFT RSF* // ID AJ130891_2 STANDARD; PRT; 40 AA. AC AJ130891; DT Tue Jul 21 07:07:23 2009 DE Ginkgo biloba chloroplast psbE, psbF, psbL and psbJ genes. OS chloroplast Ginkgo biloba (maidenhair tree) OC Ginkgo biloba RN [1] RL Unpublished FT Full length CDS FT GENE : psbF FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAB61492.1 FT PROTEIN_NAME : cytochrome b559 beta subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 264 - 383 FT DIRECTIONS : positive FT EDITING : 26 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 120 NT; CD 1 atgactatag atagaaccta tccaattttt acagttagat ggttggccgt CD 51 tcacggacta gctgtaccta cagtttCttt cttgggatca atatcagcaa CD 101 tgcagttcat ccaacgataa FT EDITED CDNA CD 1 atgactatag atagaaccta tccaattttt acagttagat ggttggccgt CD 51 tcacggacta gctgtaccta cagtttTttt cttgggatca atatcagcaa CD 101 tgcagttcat ccaacgataa SQ SEQUENCE 40 AA; MTIDRTYPIF TVRWLAVHGL AVPTVFFLGS ISAMQFIQR* // ID AJ130891_3 STANDARD; PRT; 39 AA. AC AJ130891; DT Tue Jul 21 07:07:23 2009 DE Ginkgo biloba chloroplast psbE, psbF, psbL and psbJ genes. OS chloroplast Ginkgo biloba (maidenhair tree) OC Ginkgo biloba RN [1] RL Unpublished FT Full length CDS FT GENE : psbL FT NOTE : photosystem II FT LOCUS_TAG : FT PROTEIN_ID : CAB61493.1 FT PROTEIN_NAME : L-peptide FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 406 - 522 FT DIRECTIONS : positive FT EDITING : 36 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 117 NT; CD 1 atgacacaat caaacccgaa cgaacagaat gttgaattga atcgtaccag CD 51 cctctactgg gggttgttac tcatttttgt acttgccgtt ttattctcta CD 101 attactCttt caattag FT EDITED CDNA CD 1 atgacacaat caaacccgaa cgaacagaat gttgaattga atcgtaccag CD 51 cctctactgg gggttgttac tcatttttgt acttgccgtt ttattctcta CD 101 attactTttt caattag SQ SEQUENCE 39 AA; MTQSNPNEQN VELNRTSLYW GLLLIFVLAV LFSNYFFN* // ID AJ223717_1 STANDARD; PRT; 368 AA. AC AJ223717; DT Tue Jul 21 07:07:23 2009 DE Moerckia flotoviana mitochondrial nad5 gene, partial. OS mitochondrion Moerckia flotoviana OC Moerckia flotoviana RN [1] RL Plant Syst. Evol. 218, 179-192 (1999) FT N-terminal not determined FT C-terminal not determined FT GENE : nad5 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA11529.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 5 FT EVIDENCE : FT EXCEPTION : FT INTRON 142/1 FT EDITING : 14 T(aCg) -> M(aTg) FT EDITING : 15 P(cCt) -> L(cTt) FT EDITING : 23 S(tCC) -> F(tTT) FT EDITING : 37 P(Cca) -> S(Tca) FT EDITING : 75 R(Cgt) -> C(Tgt) FT EDITING : 79 S(tCt) -> F(tTt) FT EDITING : 89 A(gcC) -> A(gcT) FT EDITING : 110 A(gcC) -> A(gcT) FT EDITING : 115 R(Cgt) -> C(Tgt) FT EDITING : 134 R(Cgg) -> W(Tgg) FT EDITING : 154 T(aCg) -> M(aTg) FT EDITING : 160 S(tCt) -> F(tTt) FT EDITING : 161 T(aCg) -> M(aTg) FT EDITING : 188 F(ttC) -> F(ttT) FT EDITING : 196 S(tCa) -> L(tTa) FT EDITING : 207 P(Cca) -> S(Tca) FT EDITING : 212 S(tCa) -> L(tTa) FT EDITING : 219 R(Cgc) -> C(Tgc) FT EDITING : 231 S(tCa) -> L(tTa) FT EDITING : 292 H(Cat) -> Y(Tat) FT EDITING : 298 L(Ctg) -> L(Ttg) FT EDITING : 300 P(cCt) -> L(cTt) FT EDITING : 311 F(ttC) -> F(ttT) FT EDITING : 332 S(tCt) -> F(tTt) FT EDITING : 333 L(Cta) -> L(Tta) FT EDITING : 334 T(acC) -> T(acT) FT EDITING : 335 L(Ctt) -> F(Ttt) FT EDITING : 336 P(cCa) -> L(cTa) FT CODON_START : 2 CL CDNALEN 1105 NT; CD 1 tccacgtttc ttttgctatt tgtcaatctt tacttttttt aCgcCtatgc CD 51 tggtaactgg agataattCC attcagttat ttttaggatg ggagggggtt CD 101 ggactcgcgC catatctatt gataaatttt tggtttacgc gcattcaggc CD 151 aaataaagcg gctattaaag ctatgctcat aaatcgcgta ggtgattttg CD 201 gattagctct cgggattatg ggtCgtttca ctatttCtca aacagttgac CD 251 ttttccacta tttttgcCtg tgctagtgtc ttttctgaac cccatcatta CD 301 tttccttttt tgtagcatgg aatttcatgc Cataactgtt attCgtattt CD 351 tagtgtttat tggcgctgtt ggaaaatccg cacagattgg attgcatact CD 401 Cggttacccg atgcaatgga gggtcccact ccagtatccg ctttgattca CD 451 tgcagctact aCggtaacag caggcgtttC taCgatagca aggtgctccc CD 501 ctttatttga atactcaccc aatgctttga ttgttattac ttttgtaggc CD 551 gctatgacgt cattCttcgc ggcaaccacc ggagtatCac aaaacgattt CD 601 aaaaagggtt atagcttatC caacttgtag tcagtCaggc tatatgatct CD 651 ttgctCgcgg catttccaac tattctgtta gcgtatttca ttCaatgaat CD 701 cacgcctgct ttaaagcact tttattcttg agtgcaggtt cagtaattca CD 751 tgccatgtcg gatgagcaag atatgcgtaa gatgggaggg cttgcttcct CD 801 tgttaccttt tacctatgct atgatgctta taggtagctt atccttaatt CD 851 ggtttccctt ttttaacggg atttCattca aaagatgtta ttCtggaacC CD 901 tgcttacacg aaatatacta ttagtggtaa cttCtctttt tggttaggaa CD 951 gtgtatcggt cttttttact tcttattact ctttccgttt actgtCtCta CD 1001 acCCttcCag caccaactaa ttcattcaag cgagacttaa gtaaatgtca CD 1051 tgatgcgccc attcttatgg caatacctct aatccttttg gcttttggga CD 1101 gtatt FT EDITED CDNA CD 1 tccacgtttc ttttgctatt tgtcaatctt tacttttttt aTgcTtatgc CD 51 tggtaactgg agataattTT attcagttat ttttaggatg ggagggggtt CD 101 ggactcgcgT catatctatt gataaatttt tggtttacgc gcattcaggc CD 151 aaataaagcg gctattaaag ctatgctcat aaatcgcgta ggtgattttg CD 201 gattagctct cgggattatg ggtTgtttca ctatttTtca aacagttgac CD 251 ttttccacta tttttgcTtg tgctagtgtc ttttctgaac cccatcatta CD 301 tttccttttt tgtagcatgg aatttcatgc Tataactgtt attTgtattt CD 351 tagtgtttat tggcgctgtt ggaaaatccg cacagattgg attgcatact CD 401 Tggttacccg atgcaatgga gggtcccact ccagtatccg ctttgattca CD 451 tgcagctact aTggtaacag caggcgtttT taTgatagca aggtgctccc CD 501 ctttatttga atactcaccc aatgctttga ttgttattac ttttgtaggc CD 551 gctatgacgt cattTttcgc ggcaaccacc ggagtatTac aaaacgattt CD 601 aaaaagggtt atagcttatT caacttgtag tcagtTaggc tatatgatct CD 651 ttgctTgcgg catttccaac tattctgtta gcgtatttca ttTaatgaat CD 701 cacgcctgct ttaaagcact tttattcttg agtgcaggtt cagtaattca CD 751 tgccatgtcg gatgagcaag atatgcgtaa gatgggaggg cttgcttcct CD 801 tgttaccttt tacctatgct atgatgctta taggtagctt atccttaatt CD 851 ggtttccctt ttttaacggg atttTattca aaagatgtta ttTtggaacT CD 901 tgcttacacg aaatatacta ttagtggtaa cttTtctttt tggttaggaa CD 951 gtgtatcggt cttttttact tcttattact ctttccgttt actgtTtTta CD 1001 acTTttcTag caccaactaa ttcattcaag cgagacttaa gtaaatgtca CD 1051 tgatgcgccc attcttatgg caatacctct aatccttttg gcttttggga CD 1101 gtatt SQ SEQUENCE 368 AA; PRFFCYLSIF TFFMLMLVTG DNFIQLFLGW EGVGLASYLL MNFWFTRIQA NKAAIKAMLM NRVGDFGLAL GIMGCFTIFQ TVDFSTIFAC ASVFSEPHHY FLFCSMEFHA MTVICILVFI GAVGKSAQIG LHTWLPDAME GPTPVSALIH AATMVTAGVF MMASCSPLFE YSPNALIVIT FVGAMTSFFA ATTGVLQNDL KSVMAYSTCS QLGYMIFACG ISNYSVSVFH LMNHACFKAL LFLSAGSVIH AMSDEQDMRK MGGLASLLPF TYAMMLMGSL SLIGFPFLTG FYSKDVILEL AYTKYTISGN FSFWLGSVSV FFTSYYSFRL LFLTFLAPTN SFKRDLSKCH DAPILMAMPL ILLAFGSI // ID AJ243789_1 STANDARD; PRT; 117 AA. AC AJ243789; DT Tue Jul 21 07:07:23 2009 DE Helianthus annuus mitochondrial rps13 gene for ribosomal protein OS mitochondrion Helianthus annuus (common sunflower) OC Helianthus annuus RN [1] RL Plant Cell Physiol. 42 (7), 768-774 (2001) RL PUBMED 11479385 FT Full length CDS FT GENE : rps13 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAC80432.1 FT PROTEIN_NAME : ribosomal protein S13 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 41 - 391 FT DIRECTIONS : positive FT EDITING : 9 S(tCa) -> L(tTa) FT EDITING : 19 S(tCa) -> L(tTa) FT EDITING : 34 R(Cgt) -> C(Tgt) FT EDITING : 96 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 351 NT; CD 1 atgttatata tttcaggagc tagatCagtt gccgatgaac aagtaagaat CD 51 tgcctCaaca aaaatagatg gaattgggcc taaaaaagcc attctggttC CD 101 gttatcgatt aggtatcagt gggaacataa agataaaaga attaactaag CD 151 tatcagatcg accaaattga acaaatgata ggtcaagatc atgttgttca CD 201 ttgggaattg aagaggggag aacgagcaga catcgaacga ttaatttcta CD 251 tttcttgtta tcgtggaatt cgtcatcaag atggatCacc cttacgcggt CD 301 caacgaactc atactaatgc taggacttct cgcaagcaaa ttcggaaatg CD 351 a FT EDITED CDNA CD 1 atgttatata tttcaggagc tagatTagtt gccgatgaac aagtaagaat CD 51 tgcctTaaca aaaatagatg gaattgggcc taaaaaagcc attctggttT CD 101 gttatcgatt aggtatcagt gggaacataa agataaaaga attaactaag CD 151 tatcagatcg accaaattga acaaatgata ggtcaagatc atgttgttca CD 201 ttgggaattg aagaggggag aacgagcaga catcgaacga ttaatttcta CD 251 tttcttgtta tcgtggaatt cgtcatcaag atggatTacc cttacgcggt CD 301 caacgaactc atactaatgc taggacttct cgcaagcaaa ttcggaaatg CD 351 a SQ SEQUENCE 117 AA; MLYISGARLV ADEQVRIALT KIDGIGPKKA ILVCYRLGIS GNIKIKELTK YQIDQIEQMI GQDHVVHWEL KRGERADIER LISISCYRGI RHQDGLPLRG QRTHTNARTS RKQIRK* // ID AJ278350_2 STANDARD; PRT; 62 AA. AC AJ278350; DT Tue Jul 21 07:07:23 2009 DE Allium cepa chloroplast partial psaC gene for PSI 9 KDa protein and OS chloroplast Allium cepa (onion) OC Allium cepa RN [1] RL J. Exp. Bot. 52 (354), 179-180 (2001) RL PUBMED 11181728 FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAB96184.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 166 - 351 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 20 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 186 NT; CD 1 aCgagttatt tcccttggtt aacaatactt gtagttttgc caatattcgc CD 51 gggttcctCa attttatttc tccctcataa agggaataag atatttagat CD 101 ggtatactat atgtatttgt ttgttagaac tccttataac aacctatgtc CD 151 ttctgttatc atttccaatt ggacgatcca ttaatt FT EDITED CDNA CD 1 aTgagttatt tcccttggtt aacaatactt gtagttttgc caatattcgc CD 51 gggttcctTa attttatttc tccctcataa agggaataag atatttagat CD 101 ggtatactat atgtatttgt ttgttagaac tccttataac aacctatgtc CD 151 ttctgttatc atttccaatt ggacgatcca ttaatt SQ SEQUENCE 62 AA; MSYFPWLTIL VVLPIFAGSL ILFLPHKGNK IFRWYTICIC LLELLITTYV FCYHFQLDDP LI // ID AJ278351_2 STANDARD; PRT; 62 AA. AC AJ278351; DT Tue Jul 21 07:07:23 2009 DE Allium sativum chloroplast partial psaC gene for PSI 9 KDa protein OS chloroplast Allium sativum (garlic) OC Allium sativum RN [1] RL J. Exp. Bot. 52 (354), 179-180 (2001) RL PUBMED 11181728 FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAB96188.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 166 - 351 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 20 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 186 NT; CD 1 aCgagttatt tcccttggct aacaatactt gtagttttgc caatattcgc CD 51 gggttcctCa attttctttc tccctcataa ggggaataag gtatttagat CD 101 ggtatactat atgtatttgt attttagaac tccttataac aacctatgtc CD 151 ttctgttatc atttccaatt ggacgatcca ttaatt FT EDITED CDNA CD 1 aTgagttatt tcccttggct aacaatactt gtagttttgc caatattcgc CD 51 gggttcctTa attttctttc tccctcataa ggggaataag gtatttagat CD 101 ggtatactat atgtatttgt attttagaac tccttataac aacctatgtc CD 151 ttctgttatc atttccaatt ggacgatcca ttaatt SQ SEQUENCE 62 AA; MSYFPWLTIL VVLPIFAGSL IFFLPHKGNK VFRWYTICIC ILELLITTYV FCYHFQLDDP LI // ID AJ278352_2 STANDARD; PRT; 62 AA. AC AJ278352; DT Tue Jul 21 07:07:23 2009 DE Allium porrum chloroplast partial psaC gene for PSI 9 KDa protein OS chloroplast Allium ampeloprasum (leek) OC Allium ampeloprasum RN [1] RL J. Exp. Bot. 52 (354), 179-180 (2001) RL PUBMED 11181728 FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAB96186.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 166 - 351 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 186 NT; CD 1 aCgagttatt tcccttggtt aacaatactt gtagttttgc caatattcgc CD 51 gggttcctca attttatttc tccctcataa agggaataag gtacttagat CD 101 ggtatactat atgtatttgt attttagaac tccttataac aacctatgtc CD 151 ttctgttatc atttccaatt ggacgatcca ttaatt FT EDITED CDNA CD 1 aTgagttatt tcccttggtt aacaatactt gtagttttgc caatattcgc CD 51 gggttcctca attttatttc tccctcataa agggaataag gtacttagat CD 101 ggtatactat atgtatttgt attttagaac tccttataac aacctatgtc CD 151 ttctgttatc atttccaatt ggacgatcca ttaatt SQ SEQUENCE 62 AA; MSYFPWLTIL VVLPIFAGSS ILFLPHKGNK VLRWYTICIC ILELLITTYV FCYHFQLDDP LI // ID AJ278353_2 STANDARD; PRT; 61 AA. AC AJ278353; DT Tue Jul 21 07:07:23 2009 DE Aloe vera chloroplast partial psaC gene for PSI 9 KDa protein and OS chloroplast Aloe vera OC Aloe vera RN [1] RL J. Exp. Bot. 52 (354), 179-180 (2001) RL PUBMED 11181728 FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAB96193.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 171 - 351 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 20 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 181 NT; CD 1 aCgagttatt tcccttggtt aacaatactt gtagttttgc cgatatttgg CD 51 gggttcttCa attttctttc tccctcatag ggggaataag gtatttaggt CD 101 ggtatactat atgtatatgc ttattagaac tccttctaac aacctatgtg CD 151 ttctgttatc atttccaatt ggacgatccc a FT EDITED CDNA CD 1 aTgagttatt tcccttggtt aacaatactt gtagttttgc cgatatttgg CD 51 gggttcttTa attttctttc tccctcatag ggggaataag gtatttaggt CD 101 ggtatactat atgtatatgc ttattagaac tccttctaac aacctatgtg CD 151 ttctgttatc atttccaatt ggacgatccc a SQ SEQUENCE 61 AA; MSYFPWLTIL VVLPIFGGSL IFFLPHRGNK VFRWYTICIC LLELLLTTYV FCYHFQLDDP X // ID AJ278354_2 STANDARD; PRT; 52 AA. AC AJ278354; DT Tue Jul 21 07:07:23 2009 DE Arabidopsis thaliana chloroplast partial psaC gene for PSI 9 KDa OS chloroplast Arabidopsis thaliana (thale cress) OC Arabidopsis thaliana RN [1] RL J. Exp. Bot. 52 (354), 179-180 (2001) RL PUBMED 11181728 FT C-terminal not determined FT GENE : ndhD FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAB96191.2 FT PROTEIN_NAME : NADH dehydrogenase subunit 4 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 196 - 351 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT CODON_START : 1 CL CDNALEN 156 NT; CD 1 aCgaatgatt ttccttggtt aacaataatt gttgtttttc caatatctgc CD 51 tggttcatta atgttatttc tcccgcatag gggaaataaa gtcaataaat CD 101 ggtatactat atgcatttgc atcttagaac ttcttctaac gacctacgct CD 151 ttttgt FT EDITED CDNA CD 1 aTgaatgatt ttccttggtt aacaataatt gttgtttttc caatatctgc CD 51 tggttcatta atgttatttc tcccgcatag gggaaataaa gtcaataaat CD 101 ggtatactat atgcatttgc atcttagaac ttcttctaac gacctacgct CD 151 ttttgt SQ SEQUENCE 52 AA; MNDFPWLTII VVFPISAGSL MLFLPHRGNK VNKWYTICIC ILELLLTTYA FC // ID AJ295996_2 STANDARD; PRT; 101 AA. AC AJ295996; DT Tue Jul 21 07:07:24 2009 DE Triticum aestivum mitochondrial partial rps19 pseudogene nad4L OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Unpublished FT Full length CDS FT GENE : nad4L FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAC79220.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1195 - 1497 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 3 P(cCt) -> L(cTt) FT EDITING : 14 S(tCt) -> F(tTt) FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 32 S(tCa) -> L(tTa) FT EDITING : 34 P(Cca) -> S(Tca) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 60 S(tCa) -> L(tTa) FT EDITING : 63 S(tCa) -> L(tTa) FT EDITING : 66 P(cCa) -> L(cTa) FT EDITING : 94 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatcCta taaaatattt cactttttct atgatcatct Ctattttagg CD 51 tattCgggga atcctcctta atagacgaaa tattcttatt atgtCaatgC CD 101 caattgaatC aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatCa tttgcttCat tagttcCaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttcgagtccg agggactatt gctgtcgaat Ctataaattg cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggatcTta taaaatattt cactttttct atgatcatct Ttattttagg CD 51 tattTgggga atcctcctta atagacgaaa tattcttatt atgtTaatgT CD 101 caattgaatT aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatTa tttgcttTat tagttcTaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttcgagtccg agggactatt gctgtcgaat Ttataaattg cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDLIKYFTFS MIIFILGIWG ILLNRRNILI MLMSIELMLL AVNLNFLVFS VSLDDMMGQL FALLVLTVAA AESAIGLAIF VITFRVRGTI AVEFINCIQG * // ID AJ295997_1 STANDARD; PRT; 101 AA. AC AJ295997; DT Tue Jul 21 07:07:24 2009 DE Oryza sativa mitochondrial nad4L gene for NADH dehydrogenase OS mitochondrion Oryza sativa (rice) OC Oryza sativa RN [1] RL Unpublished FT Full length CDS FT GENE : nad4L FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAC79145.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 696 - 998 FT DIRECTIONS : positive FT EDITING : 1 T(aCg) -> M(aTg) FT EDITING : 3 P(cCt) -> L(cTt) FT EDITING : 14 S(tCt) -> F(tTt) FT EDITING : 19 R(Cgg) -> W(Tgg) FT EDITING : 32 S(tCa) -> L(tTa) FT EDITING : 34 P(Cca) -> S(Tca) FT EDITING : 37 S(tCa) -> L(tTa) FT EDITING : 60 S(tCa) -> L(tTa) FT EDITING : 63 S(tCa) -> L(tTa) FT EDITING : 66 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 aCggatcCta taaaatattt cactttttct atgatcatct Ctattttagg CD 51 tattCgggga atcctcctta atagacgaaa tattcttatt atgtCaatgC CD 101 caattgaatC aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatCa tttgcttCat tagttcCaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttcgagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa FT EDITED CDNA CD 1 aTggatcTta taaaatattt cactttttct atgatcatct Ttattttagg CD 51 tattTgggga atcctcctta atagacgaaa tattcttatt atgtTaatgT CD 101 caattgaatT aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatTa tttgcttTat tagttcTaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttcgagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 taa SQ SEQUENCE 101 AA; MDLIKYFTFS MIIFILGIWG ILLNRRNILI MLMSIELMLL AVNLNFLVFS VSLDDMMGQL FALLVLTVAA AESAIGLAIF VITFRVRGTI AVEFINCIQG * // ID AJ296100_1 STANDARD; PRT; 265 AA. AC AJ296100; DT Tue Jul 21 07:07:24 2009 DE Elymus sibiricus mitochondrial coiii gene for cytochrome c oxidase OS mitochondrion Elymus sibiricus OC Elymus sibiricus RN [1] RL Unpublished FT Full length CDS FT GENE : coiii FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAC12836.2 FT PROTEIN_NAME : cytochrome C oxidase subunit III FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 795 FT DIRECTIONS : positive FT EDITING : 78 H(Cac) -> Y(Tac) FT EDITING : 88 S(tcC) -> S(tcT) FT EDITING : 96 P(Ccc) -> S(Tcc) FT EDITING : 97 L(Ctt) -> F(Ttt) FT EDITING : 163 L(Ctt) -> F(Ttt) FT EDITING : 243 G(ggC) -> G(ggT) FT EDITING : 247 L(Ctg) -> L(Ttg) FT CODON_START : 1 CL CDNALEN 795 NT; CD 1 atgattgaat ctcagaggca ttcttatcat ttggtagatc caagtccatg CD 51 gcctatttcg gttcactcgg agctttggca accaccgtag gaggtgtgat CD 101 gtacatgcac tcatttcaag ggggtgcaac acttctcagt ttgggcctaa CD 151 tatttctcct ttataccatg ttcgtatggt ggcgggatgt tctacgtgaa CD 201 tccacgttgg aagggcatca tacaaaagct gCacaattag gacctcgata CD 251 tggttctatt ctcCtcatag tctcggaggt tatgtCccCt tttgcttttt CD 301 tttgggcttc ttctcattct tctttggcac ctacggtaga gatcggaggt CD 351 atttggcccc caaaagggat tggggtttta gatccttggg aaatccctct CD 401 tcttaatacc cctattctcc cttcatccgg agctgccgta acttgggctc CD 451 atcatgctat actcgcgggg aaggaaaaac gagcagCtta cgctttagta CD 501 gcaaccgttt cactggctct agtatccact ggctttcaag gaatggaata CD 551 ttaccaagca ccctccacta tttcggatag tatttatggt tctacctttt CD 601 tcttagcaac tggctttcat ggttttcatg tgattatagg tactcttttc CD 651 ttgatcgtat gtggtattcg ccaatatctt ggtcatctga ccaagaagca CD 701 tcacgttggc tttgaagcag ctgcatggCa ctggcattCt gtagacgtgg CD 751 ttcggttatt cccatttgtc tctatctatt ggtggggagg tatag FT EDITED CDNA CD 1 atgattgaat ctcagaggca ttcttatcat ttggtagatc caagtccatg CD 51 gcctatttcg gttcactcgg agctttggca accaccgtag gaggtgtgat CD 101 gtacatgcac tcatttcaag ggggtgcaac acttctcagt ttgggcctaa CD 151 tatttctcct ttataccatg ttcgtatggt ggcgggatgt tctacgtgaa CD 201 tccacgttgg aagggcatca tacaaaagct gTacaattag gacctcgata CD 251 tggttctatt ctcTtcatag tctcggaggt tatgtTccTt tttgcttttt CD 301 tttgggcttc ttctcattct tctttggcac ctacggtaga gatcggaggt CD 351 atttggcccc caaaagggat tggggtttta gatccttggg aaatccctct CD 401 tcttaatacc cctattctcc cttcatccgg agctgccgta acttgggctc CD 451 atcatgctat actcgcgggg aaggaaaaac gagcagTtta cgctttagta CD 501 gcaaccgttt cactggctct agtatccact ggctttcaag gaatggaata CD 551 ttaccaagca ccctccacta tttcggatag tatttatggt tctacctttt CD 601 tcttagcaac tggctttcat ggttttcatg tgattatagg tactcttttc CD 651 ttgatcgtat gtggtattcg ccaatatctt ggtcatctga ccaagaagca CD 701 tcacgttggc tttgaagcag ctgcatggTa ctggcattTt gtagacgtgg CD 751 ttcggttatt cccatttgtc tctatctatt ggtggggagg tatag SQ SEQUENCE 265 AA; MIESQRHSYH LVDPSPWPIS VHSELWQPP* EV*CTCTHFK GVQHFSVWA* YFSFIPCSYG GGMFYVNPRW KGIIQKLYN* DLDMVLFSS* SRRLCSFLLF FGLLLILLWH LR*RSEVFGP QKGLGF*ILG KSLFLIPLFS LHPELP*LGL IMLYSRGRKN EQFTL**QPF HWL*YPLAFK EWNITKHPPL FRIVFMVLPF S*QLAFMVFM *L*VLFS*SY VVFANILVI* PRSITLALKQ LHGTGIL*TW FGYSHLSLSI GGEV* // ID AJ299548_1 STANDARD; PRT; 417 AA. AC AJ299548; DT Tue Jul 21 07:07:24 2009 DE Plagiopus oederi mitochondrial partial nad2 gene for NADH OS mitochondrion Plagiopus oederi OC Plagiopus oederi RN [1] RL Mol. Phylogenet. Evol. 18 (1), 117-126 (2001) RL PUBMED 11161748 FT N-terminal not determined FT C-terminal not determined FT GENE : nad2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAC21445.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 20/0 FT EDITING : 248 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 1252 NT; CD 1 aaaatatgat tatccaccat tagtgtgtaa tgttagttgg cttggtttac CD 51 ttagtgttct aataactatc ttattggtcg cttctagcac acctctaact CD 101 gttgctaatt tattctataa taatttaata atagacaatt ttacatattt CD 151 ttgccaaatc tttctattaa taagtacggc tagcactata gttatgtgtc CD 201 tgggttattt caaagaagag agtttgaatg cttttgaatc tattgtttta CD 251 attctacttt ccacttgtag tatgcttttt atgatttcgg cttatgattt CD 301 aattgccatg tatttagcta ttgagcttca aagtttatgt ttttatgtga CD 351 ttgcagcatc aaaaagagac tctgaatttt ctacagaagc tggcttaaaa CD 401 tattttattt taggtgcatt ctcctctgga attttattgt ttggttgttc CD 451 tatgatttat ggatttactg gagttaccaa ctttgaggaa ttagctaaga CD 501 ttttcactgg atatgaaatc actttatttg gtgctcaatc tagtggtatc CD 551 tttatgggga ttctatttat tgctgtaggt tttttattta agatcacagc CD 601 agttcctttt catatgtggg cacctgatgt atacgagggt tcacctactc CD 651 tggttacagc attcttttct attgcaccta aaatatctat tcttgccaat CD 701 atggtacgtg tttttattta tagtttctat gatccaacat ggTaacaact CD 751 attctttttt tgcagcattg cttctatgat cttaggagca ttggctgcaa CD 801 tggctcaaaa caaagtcaaa agacttttag cttatagttc tattggacat CD 851 gtaggttatc tttttattgg tttttcatgt ggaaccatag aagggattca CD 901 atcgctacta attggtgttt ttatttatgt attaatgacc atcaatgtat CD 951 tcgccatagt tttagcatta cgtcaaaacc gtttcaaata tatagcagat CD 1001 ttaggtgctt tagccaaaac taatcctatt ttagctatta ctctgtctat CD 1051 tactatgttt tcatacgcag gaataccccc gttagccgga ttttgtagca CD 1101 aattttattt gttttttgct gctttaggct gcggggctta cttactagcc CD 1151 ttaataggag ttgttactag tgtcattagt tgtttttatt atatacgctt CD 1201 tgtgaaaata atgtattttg atacacctaa aaaatggatt ctatataaac CD 1251 ca FT EDITED CDNA CD 1 aaaatatgat tatccaccat tagtgtgtaa tgttagttgg cttggtttac CD 51 ttagtgttct aataactatc ttattggtcg cttctagcac acctctaact CD 101 gttgctaatt tattctataa taatttaata atagacaatt ttacatattt CD 151 ttgccaaatc tttctattaa taagtacggc tagcactata gttatgtgtc CD 201 tgggttattt caaagaagag agtttgaatg cttttgaatc tattgtttta CD 251 attctacttt ccacttgtag tatgcttttt atgatttcgg cttatgattt CD 301 aattgccatg tatttagcta ttgagcttca aagtttatgt ttttatgtga CD 351 ttgcagcatc aaaaagagac tctgaatttt ctacagaagc tggcttaaaa CD 401 tattttattt taggtgcatt ctcctctgga attttattgt ttggttgttc CD 451 tatgatttat ggatttactg gagttaccaa ctttgaggaa ttagctaaga CD 501 ttttcactgg atatgaaatc actttatttg gtgctcaatc tagtggtatc CD 551 tttatgggga ttctatttat tgctgtaggt tttttattta agatcacagc CD 601 agttcctttt catatgtggg cacctgatgt atacgagggt tcacctactc CD 651 tggttacagc attcttttct attgcaccta aaatatctat tcttgccaat CD 701 atggtacgtg tttttattta tagtttctat gatccaacat ggCaacaact CD 751 attctttttt tgcagcattg cttctatgat cttaggagca ttggctgcaa CD 801 tggctcaaaa caaagtcaaa agacttttag cttatagttc tattggacat CD 851 gtaggttatc tttttattgg tttttcatgt ggaaccatag aagggattca CD 901 atcgctacta attggtgttt ttatttatgt attaatgacc atcaatgtat CD 951 tcgccatagt tttagcatta cgtcaaaacc gtttcaaata tatagcagat CD 1001 ttaggtgctt tagccaaaac taatcctatt ttagctatta ctctgtctat CD 1051 tactatgttt tcatacgcag gaataccccc gttagccgga ttttgtagca CD 1101 aattttattt gttttttgct gctttaggct gcggggctta cttactagcc CD 1151 ttaataggag ttgttactag tgtcattagt tgtttttatt atatacgctt CD 1201 tgtgaaaata atgtattttg atacacctaa aaaatggatt ctatataaac CD 1251 ca SQ SEQUENCE 417 AA; KYDYPPLVCN VSWLGLLSVL ITILLVASST PLTVANLFYN NLIIDNFTYF CQIFLLISTA STIVMCLGYF KEESLNAFES IVLILLSTCS MLFMISAYDL IAMYLAIELQ SLCFYVIAAS KRDSEFSTEA GLKYFILGAF SSGILLFGCS MIYGFTGVTN FEELAKIFTG YEITLFGAQS SGIFMGILFI AVGFLFKITA VPFHMWAPDV YEGSPTLVTA FFSIAPKISI LANMVRVFIY SFYDPTWQQL FFFCSIASMI LGALAAMAQN KVKRLLAYSS IGHVGYLFIG FSCGTIEGIQ SLLIGVFIYV LMTINVFAIV LALRQNRFKY IADLGALAKT NPILAITLSI TMFSYAGIPP LAGFCSKFYL FFAALGCGAY LLALIGVVTS VISCFYYIRF VKIMYFDTPK KWILYKP // ID AJ313433_1 STANDARD; PRT; 160 AA. AC AJ313433; DT Tue Jul 21 07:07:24 2009 DE Olea europaea subsp. europaea mitochondrial ORFB and COIII gene for OS mitochondrion Olea europaea subsp. europaea OC Olea europaea subsp. europaea RN [1] RL Plant Sci. 164 (2), 241-252 (2003) FT Full length CDS FT GENE : FT NOTE : ORFB FT LOCUS_TAG : FT PROTEIN_ID : CAC79246.1 FT PROTEIN_NAME : hypothetical protein FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 480 FT DIRECTIONS : positive FT EDITING : 16 S(tCa) -> L(tTa) FT EDITING : 20 L(Ctc) -> F(Ttc) FT CODON_START : 1 CL CDNALEN 480 NT; CD 1 atgcctcaac tggataaatt cacttatttc acacaattct tctggtCatg CD 51 ccttttaCtc tttactttct atattgccat atgcaatgat ggagatggag CD 101 tacttgggat cagcagaatt ctaaaactac ggaaccaact ggtttcacac CD 151 cgggagaaca acatccggag caacgacccc aacagtttgg aagatatctt CD 201 gagaaaaggt tttagcaccg gtgtatccta tatgtactcc agtttattcg CD 251 aagtatccca atggtgtaac gccgtcgact tattgggaaa aaggaagaag CD 301 atcactttga tctcttgttt cggagaaata agtggctcac gaggaatgga CD 351 aagaaatata ttctatttga tttcgaagtc ctcatatagc acttcttcca CD 401 atcctggatg ggggatcact tgtaggaatg acataatgct aatgcatgtt CD 451 ctacacggcc aaggaagcat cggtttttaa FT EDITED CDNA CD 1 atgcctcaac tggataaatt cacttatttc acacaattct tctggtTatg CD 51 ccttttaTtc tttactttct atattgccat atgcaatgat ggagatggag CD 101 tacttgggat cagcagaatt ctaaaactac ggaaccaact ggtttcacac CD 151 cgggagaaca acatccggag caacgacccc aacagtttgg aagatatctt CD 201 gagaaaaggt tttagcaccg gtgtatccta tatgtactcc agtttattcg CD 251 aagtatccca atggtgtaac gccgtcgact tattgggaaa aaggaagaag CD 301 atcactttga tctcttgttt cggagaaata agtggctcac gaggaatgga CD 351 aagaaatata ttctatttga tttcgaagtc ctcatatagc acttcttcca CD 401 atcctggatg ggggatcact tgtaggaatg acataatgct aatgcatgtt CD 451 ctacacggcc aaggaagcat cggtttttaa SQ SEQUENCE 160 AA; MPQLDKFTYF TQFFWLCLLF FTFYIAICND GDGVLGISRI LKLRNQLVSH RENNIRSNDP NSLEDILRKG FSTGVSYMYS SLFEVSQWCN AVDLLGKRKK ITLISCFGEI SGSRGMERNI FYLISKSSYS TSSNPGWGIT CRNDIMLMHV LHGQGSIGF* // ID AJ313433_2 STANDARD; PRT; 266 AA. AC AJ313433; DT Tue Jul 21 07:07:24 2009 DE Olea europaea subsp. europaea mitochondrial ORFB and COIII gene for OS mitochondrion Olea europaea subsp. europaea OC Olea europaea subsp. europaea RN [1] RL Plant Sci. 164 (2), 241-252 (2003) FT Full length CDS FT GENE : COIII FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAC79247.1 FT PROTEIN_NAME : cytochrome oxidase subunit III FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1020 - 1817 FT DIRECTIONS : positive FT EDITING : 82 P(cCt) -> L(cTt) FT EDITING : 102 R(Cgg) -> W(Tgg) FT EDITING : 104 S(tCt) -> F(tTt) FT EDITING : 105 S(tCt) -> F(tTt) FT EDITING : 140 P(cCc) -> L(cTc) FT EDITING : 189 S(tCC) -> F(tTT) FT EDITING : 218 S(tCg) -> L(tTg) FT EDITING : 252 R(Cgg) -> W(Tgg) FT EDITING : 255 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 798 NT; CD 1 atgattgaat ctcagaggca ttcttatcat ttggtagatc caagtccatg CD 51 gcctatttcg ggttcactcg gagctttggc aacaaccgta ggaggtgtga CD 101 tgtacatgca ctcatttcaa gggggtgcaa cacttctcag tttgggcctc CD 151 atatttctcc tatataccat gttcgtatgg tggcgcgatg ttctacgtga CD 201 atccacgttg gaaggacatc ataccaaagt cgtacaatta ggacCtcgat CD 251 atggttttat tctttttatc gtatcggagg ttatgttctt ttttgctttt CD 301 tttCgggctt CttCtcattc ttctttggca cctacggtag agatcggagg CD 351 tatttggccc ccaaaaggta ttggggtttt agatccttgg gaaatccctt CD 401 ttcttaatac ccttattcCc ctttcatccg gagctgccgt aacttgggct CD 451 catcatgcta tactcgcggg gaaggaaaaa cgagcagttt acgctttagt CD 501 agctaccgtt ttactggctc tagtattcac tggctttcaa ggaatggaat CD 551 attatcaagc accctCCact atttcggata gtatttatgg ttctaccttt CD 601 ttcttagcaa ctggctttca tggttttcat gtgattatag gtactctttt CD 651 ctCgatcata tgtggtattc gccaatatct tggtcatctg accaaggagc CD 701 atcacgttgg ctttgaagca gctgcatggt actggcattt tgtagacgtg CD 751 gttCggttat tccCatttgt ctctatctat tggtggggag gtatatga FT EDITED CDNA CD 1 atgattgaat ctcagaggca ttcttatcat ttggtagatc caagtccatg CD 51 gcctatttcg ggttcactcg gagctttggc aacaaccgta ggaggtgtga CD 101 tgtacatgca ctcatttcaa gggggtgcaa cacttctcag tttgggcctc CD 151 atatttctcc tatataccat gttcgtatgg tggcgcgatg ttctacgtga CD 201 atccacgttg gaaggacatc ataccaaagt cgtacaatta ggacTtcgat CD 251 atggttttat tctttttatc gtatcggagg ttatgttctt ttttgctttt CD 301 tttTgggctt TttTtcattc ttctttggca cctacggtag agatcggagg CD 351 tatttggccc ccaaaaggta ttggggtttt agatccttgg gaaatccctt CD 401 ttcttaatac ccttattcTc ctttcatccg gagctgccgt aacttgggct CD 451 catcatgcta tactcgcggg gaaggaaaaa cgagcagttt acgctttagt CD 501 agctaccgtt ttactggctc tagtattcac tggctttcaa ggaatggaat CD 551 attatcaagc accctTTact atttcggata gtatttatgg ttctaccttt CD 601 ttcttagcaa ctggctttca tggttttcat gtgattatag gtactctttt CD 651 ctTgatcata tgtggtattc gccaatatct tggtcatctg accaaggagc CD 701 atcacgttgg ctttgaagca gctgcatggt actggcattt tgtagacgtg CD 751 gttTggttat tccTatttgt ctctatctat tggtggggag gtatatga SQ SEQUENCE 266 AA; MIESQRHSYH LVDPSPWPIS GSLGALATTV GGVMYMHSFQ GGATLLSLGL IFLLYTMFVW WRDVLRESTL EGHHTKVVQL GLRYGFILFI VSEVMFFFAF FWAFFHSSLA PTVEIGGIWP PKGIGVLDPW EIPFLNTLIL LSSGAAVTWA HHAILAGKEK RAVYALVATV LLALVFTGFQ GMEYYQAPFT ISDSIYGSTF FLATGFHGFH VIIGTLFLII CGIRQYLGHL TKEHHVGFEA AAWYWHFVDV VWLFLFVSIY WWGGI* // ID AJ344260_1 STANDARD; PRT; 74 AA. AC AJ344260; DT Tue Jul 21 07:07:24 2009 DE Solanum tuberosum mitochondrial atp9 pseudogene. OS mitochondrion Solanum tuberosum (potato) OC Solanum tuberosum RN [1] RL J. Biol. Chem. 276 (47), 43541-43547 (2001) RL PUBMED 11557765 FT Full length CDS FT pseudo-gene FT GENE : atp9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : FT PROTEIN_NAME : FT EVIDENCE : FT EXCEPTION : FT REGIONS : 452 - 672 FT DIRECTIONS : positive FT EDITING : 17 S(tCa) -> L(tTa) FT EDITING : 30 S(tcC) -> S(tcT) FT EDITING : 70 S(tCc) -> F(tTc) FT EDITING : 71 L(Ctg) -> L(Ttg) FT CODON_START : 1 CL CDNALEN 221 NT; CD 1 agattagaag gtgcaaaatg aatcggcgca ggagctgcta caattgcttC CD 51 agcgggagct gctgccggta ttggaaatgt tttcagttcC ttaattctgt CD 101 tgcgagaaat cattcattgg caaaacaatt atttggttat gctattttgg CD 151 gatttgcttt aaccgaagct attgccttgt tttccttaat gatggccttc CD 201 ttaatcctCc Ctgtctttta g FT EDITED CDNA CD 1 agattagaag gtgcaaaatg aatcggcgca ggagctgcta caattgcttT CD 51 agcgggagct gctgccggta ttggaaatgt tttcagttcT ttaattctgt CD 101 tgcgagaaat cattcattgg caaaacaatt atttggttat gctattttgg CD 151 gatttgcttt aaccgaagct attgccttgt tttccttaat gatggccttc CD 201 ttaatcctTc Ttgtctttta g SQ SEQUENCE 74 AA; RLEGAK*IGA GAATIALAGA AAGIGNVFSS LILLREIIHW QNNYLVMLFW DLL*PKLLPC FP**WPS*SF LSFX // ID AJ535507_1 STANDARD; PRT; 190 AA. AC AJ535507; DT Tue Jul 21 07:07:25 2009 DE Triticum aestivum mitochondrial rpl5 gene for ribosomal protein L5 OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Gene 324, 139-147 (2004) RL PUBMED 14693379 FT Full length CDS FT GENE : rpl5 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAD59558.1 FT PROTEIN_NAME : ribosomal protein L5 FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 261 - 830 FT DIRECTIONS : positive FT EDITING : 23 H(Cac) -> Y(Tac) FT EDITING : 39 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 570 NT; CD 1 atgatgtttc cactccattt tcattacgaa gatgtattac gtcaggatct CD 51 gttgctcaaa ctgaatCacg ccaatgttat ggaagttcct ggattgtttg CD 101 aaataagatt agtacCaaaa gctgcctctg atttcagaat ccaatttgga CD 151 aaattggcta tggagatttt gtgcggtcag agattcatac agacacaaag CD 201 gggcccctat tttcaagcag gaaagtcgtt tcgatccaat ccattcttgg CD 251 ggtccgaaaa agacactgga tatgtcagtg actttgcacg acaaagcgtt CD 301 ctccgagggc atggaatgta ccattttttg gtcagaatct ttacagtaat CD 351 gtctatgttg gattctccgg tcgaaatacg ggaaaactcc atcaaattct CD 401 ttatggaaac ggagttttgc gaattctccc cggaactgga agatcatttc CD 451 gagatcttcg agcatattcg agggttcaat gtgactattg tcacttcggc CD 501 caatacaaaa gatgagactt tactactgtg gagcggcttt ttgctaaaag CD 551 atgaggggga aactaagtaa FT EDITED CDNA CD 1 atgatgtttc cactccattt tcattacgaa gatgtattac gtcaggatct CD 51 gttgctcaaa ctgaatTacg ccaatgttat ggaagttcct ggattgtttg CD 101 aaataagatt agtacTaaaa gctgcctctg atttcagaat ccaatttgga CD 151 aaattggcta tggagatttt gtgcggtcag agattcatac agacacaaag CD 201 gggcccctat tttcaagcag gaaagtcgtt tcgatccaat ccattcttgg CD 251 ggtccgaaaa agacactgga tatgtcagtg actttgcacg acaaagcgtt CD 301 ctccgagggc atggaatgta ccattttttg gtcagaatct ttacagtaat CD 351 gtctatgttg gattctccgg tcgaaatacg ggaaaactcc atcaaattct CD 401 ttatggaaac ggagttttgc gaattctccc cggaactgga agatcatttc CD 451 gagatcttcg agcatattcg agggttcaat gtgactattg tcacttcggc CD 501 caatacaaaa gatgagactt tactactgtg gagcggcttt ttgctaaaag CD 551 atgaggggga aactaagtaa SQ SEQUENCE 190 AA; MMFPLHFHYE DVLRQDLLLK LNYANVMEVP GLFEIRLVLK AASDFRIQFG KLAMEILCGQ RFIQTQRGPY FQAGKSFRSN PFLGSEKDTG YVSDFARQSV LRGHGMYHFL VRIFTVMSML DSPVEIRENS IKFFMETEFC EFSPELEDHF EIFEHIRGFN VTIVTSANTK DETLLLWSGF LLKDEGETK* // ID AJ535507_2 STANDARD; PRT; 100 AA. AC AJ535507; DT Tue Jul 21 07:07:25 2009 DE Triticum aestivum mitochondrial rpl5 gene for ribosomal protein L5 OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Gene 324, 139-147 (2004) RL PUBMED 14693379 FT Full length CDS FT pseudo-gene FT GENE : rps14 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : FT PROTEIN_NAME : ribosomal protein S14 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 832 - 1129 FT DIRECTIONS : positive FT EDITING : 32 R(Cga) -> *(Tga) FT EDITING : 33 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 298 NT; CD 1 atgccggaga agcgacgaaa tatacgagat cacaaacgta gattgctcgc CD 51 ggctaaatat gaattgagac gaaagctttc taattttgta accCgatCtt CD 101 ccgtctgata tgcgggacaa acatcgttat aagttgtcca agttgccaag CD 151 aaagagttca atggcacgag taagaaaccg aggtattttc acgggtcgcc CD 201 ctcgttccgc agttgagttc tttcgcattt atcgtatcgt ttttcgtgga CD 251 ttagcatctc gaggttcttt gatgggcata aagaaatcgt cttggtag FT EDITED CDNA CD 1 atgccggaga agcgacgaaa tatacgagat cacaaacgta gattgctcgc CD 51 ggctaaatat gaattgagac gaaagctttc taattttgta accTgatTtt CD 101 ccgtctgata tgcgggacaa acatcgttat aagttgtcca agttgccaag CD 151 aaagagttca atggcacgag taagaaaccg aggtattttc acgggtcgcc CD 201 ctcgttccgc agttgagttc tttcgcattt atcgtatcgt ttttcgtgga CD 251 ttagcatctc gaggttcttt gatgggcata aagaaatcgt cttggtag SQ SEQUENCE 100 AA; MPEKRRNIRD HKRRLLAAKY ELRRKLSNFV T*FSV*YAGQ TSL*VVQVAK KEFNGTSKKP RYFHGSPSFR S*VLSHLSYR FSWISISRFF DGHKEIVLVX // ID AJ548851_1 STANDARD; PRT; 200 AA. AC AJ548851; DT Tue Jul 21 07:07:26 2009 DE Blechnum occidentale mitochondrial partial atp1 gene for ATPase OS mitochondrion Blechnum occidentale OC Blechnum occidentale RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70239.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 88/2 FT EDITING : 94 *(Tga) -> R(Cga) FT EDITING : 115 *(Taa) -> Q(Caa) FT EDITING : 131 *(Taa) -> Q(Caa) FT EDITING : 139 *(Tga) -> R(Cga) FT EDITING : 154 *(Tag) -> Q(Cag) FT EDITING : 160 *(Tag) -> Q(Cag) FT EDITING : 177 *(Taa) -> Q(Caa) FT EDITING : 184 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 601 NT; CD 1 atcggttggg gacggaattg cacgtgtgta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattc gccagcggcg tgaaaggaat ggcttcgaat CD 101 tttgagaatg agaatgtagg aattgttcta tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgctaggt tgtgtagttg atgcgttagg agtacctatt CD 251 gatggaaaag gtgctttgag cgcggtagaa Tgaagacgtg tagaagtcaa CD 301 agtctctggg attattgcac gtaaatctgt ccacgaacct atgTaaacgg CD 351 ggttaaaagc ggtggatagc ctagtcctta taggtcgtgg tTaatgggaa CD 401 ccgataatcg gcgacTgaca aaccggaaag actgctatag ctattgatac CD 451 cattccgaac Tagaaaccaa tcaacgcaTa gggcaccttc gatagtgaaa CD 501 gattgtttcg cgtgtacgta gcgattggaT aaaaacgttc aaccgtggca CD 551 Taattggtta agattccctc ggaagccggt gctccggaat atctcattat CD 601 t FT EDITED CDNA CD 1 atcggttggg gacggaattg cacgtgtgta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattc gccagcggcg tgaaaggaat ggcttcgaat CD 101 tttgagaatg agaatgtagg aattgttcta tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgctaggt tgtgtagttg atgcgttagg agtacctatt CD 251 gatggaaaag gtgctttgag cgcggtagaa Cgaagacgtg tagaagtcaa CD 301 agtctctggg attattgcac gtaaatctgt ccacgaacct atgCaaacgg CD 351 ggttaaaagc ggtggatagc ctagtcctta taggtcgtgg tCaatgggaa CD 401 ccgataatcg gcgacCgaca aaccggaaag actgctatag ctattgatac CD 451 cattccgaac Cagaaaccaa tcaacgcaCa gggcaccttc gatagtgaaa CD 501 gattgtttcg cgtgtacgta gcgattggaC aaaaacgttc aaccgtggca CD 551 Caattggtta agattccctc ggaagccggt gctccggaat atctcattat CD 601 t SQ SEQUENCE 200 AA; SVGDGIARVY GSNKIQAGEM VEFASGVKGM ASNFENENVG IVLSGSDTAI KEGDMVKRTG SIVDVPVGKA MLGCVVDALG VPIDGKGALS AVERRRVEVK VSGIIARKSV HEPMQTGLKA VDSLVLIGRG QWEPIIGDRQ TGKTAIAIDT IPNQKPINAQ GTFDSERLFR VYVAIGQKRS TVAQLVKIPS EAGAPEYLII // ID AJ548852_1 STANDARD; PRT; 200 AA. AC AJ548852; DT Tue Jul 21 07:07:26 2009 DE Pteridium aquilinum mitochondrial partial atp1 gene for ATPase OS mitochondrion Pteridium aquilinum OC Pteridium aquilinum RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70240.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 88/2 FT EDITING : 94 *(Tga) -> R(Cga) FT EDITING : 115 *(Taa) -> Q(Caa) FT EDITING : 131 *(Taa) -> Q(Caa) FT EDITING : 139 *(Tga) -> R(Cga) FT EDITING : 154 *(Tag) -> Q(Cag) FT EDITING : 160 *(Tag) -> Q(Cag) FT EDITING : 177 *(Taa) -> Q(Caa) FT EDITING : 184 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 601 NT; CD 1 atcggttggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattc gccagcggcg tgaaaggaat ggcttcgaat CD 101 tctgagaatg agaatgtagg aattgttata tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgccaggt tgtgtagttg atgcgttagg agtacctatt CD 251 gatggaaaag gtgctttgag cgcggtagaa Tgaagacgtg tagaagtcaa CD 301 agtctctggg attattgcac gtaaatctgt ccacgaacct atgTaaacgg CD 351 ggttaaaagc ggcggatagc ccagtcctta taggtcgtgg tTaatgggaa CD 401 ccgataatcg gcgacTgaca aaccggaaag actgctatag ctattgatac CD 451 cattttgaac Tagaaaccaa tcaacgcaTa gggcaccttc gatagtgaaa CD 501 gattgtttcg cgtgtacgta gcgattggaT aaaaacgttc aaccgtggca CD 551 Taattggtta agattccctc ggaagccggt gctccggaat atctcattat CD 601 t FT EDITED CDNA CD 1 atcggttggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattc gccagcggcg tgaaaggaat ggcttcgaat CD 101 tctgagaatg agaatgtagg aattgttata tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgccaggt tgtgtagttg atgcgttagg agtacctatt CD 251 gatggaaaag gtgctttgag cgcggtagaa Cgaagacgtg tagaagtcaa CD 301 agtctctggg attattgcac gtaaatctgt ccacgaacct atgCaaacgg CD 351 ggttaaaagc ggcggatagc ccagtcctta taggtcgtgg tCaatgggaa CD 401 ccgataatcg gcgacCgaca aaccggaaag actgctatag ctattgatac CD 451 cattttgaac Cagaaaccaa tcaacgcaCa gggcaccttc gatagtgaaa CD 501 gattgtttcg cgtgtacgta gcgattggaC aaaaacgttc aaccgtggca CD 551 Caattggtta agattccctc ggaagccggt gctccggaat atctcattat CD 601 t SQ SEQUENCE 200 AA; SVGDGIARVY GSNKIQAGEM VEFASGVKGM ASNSENENVG IVISGSDTAI KEGDMVKRTG SIVDVPVGKA MPGCVVDALG VPIDGKGALS AVERRRVEVK VSGIIARKSV HEPMQTGLKA ADSPVLIGRG QWEPIIGDRQ TGKTAIAIDT ILNQKPINAQ GTFDSERLFR VYVAIGQKRS TVAQLVKIPS EAGAPEYLII // ID AJ548853_1 STANDARD; PRT; 200 AA. AC AJ548853; DT Tue Jul 21 07:07:26 2009 DE Dicksonia antarctica mitochondrial partial atp1 gene for ATPase OS mitochondrion Dicksonia antarctica OC Dicksonia antarctica RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70241.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 88/2 FT EDITING : 94 *(Tga) -> R(Cga) FT EDITING : 115 *(Taa) -> Q(Caa) FT EDITING : 139 *(Tga) -> R(Cga) FT EDITING : 154 *(Tag) -> Q(Cag) FT EDITING : 160 *(Tag) -> Q(Cag) FT EDITING : 177 *(Taa) -> Q(Caa) FT EDITING : 184 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 601 NT; CD 1 atcggttggg gatggaactg cacgtgttta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattt gccagcggtg tgaaaggaat ggcttcgaat CD 101 tctgagaatg agaatgtagg aattgttata tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgccaggt tgtgtagttg atgcgttagg agtacctatt CD 251 gatggaaaag gtgctttgag cgcggtagaa Tgaagacgtg tagaagtcaa CD 301 agtctctggg attattgcac gtaaatctgt ccacgaacct atgTaaacgg CD 351 ggttaaaagc ggtggatagc ccagtcctta taggtcgtgg tcaatgggaa CD 401 ccgataatcg gcgacTgaca aaccggaaag actgctatag ctattgatac CD 451 cattccgaac Tagaaaccaa tcaacgcaTa gggcaccttc gatagtgaaa CD 501 gattgttttg cgtgtacgta gcgattggaT aaaaacgttc aaccgtggca CD 551 Taattggtta agattccctc ggaagccggt gctccggaat atttcattat CD 601 t FT EDITED CDNA CD 1 atcggttggg gatggaactg cacgtgttta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattt gccagcggtg tgaaaggaat ggcttcgaat CD 101 tctgagaatg agaatgtagg aattgttata tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgccaggt tgtgtagttg atgcgttagg agtacctatt CD 251 gatggaaaag gtgctttgag cgcggtagaa Cgaagacgtg tagaagtcaa CD 301 agtctctggg attattgcac gtaaatctgt ccacgaacct atgCaaacgg CD 351 ggttaaaagc ggtggatagc ccagtcctta taggtcgtgg tcaatgggaa CD 401 ccgataatcg gcgacCgaca aaccggaaag actgctatag ctattgatac CD 451 cattccgaac Cagaaaccaa tcaacgcaCa gggcaccttc gatagtgaaa CD 501 gattgttttg cgtgtacgta gcgattggaC aaaaacgttc aaccgtggca CD 551 Caattggtta agattccctc ggaagccggt gctccggaat atttcattat CD 601 t SQ SEQUENCE 200 AA; SVGDGTARVY GSNKIQAGEM VEFASGVKGM ASNSENENVG IVISGSDTAI KEGDMVKRTG SIVDVPVGKA MPGCVVDALG VPIDGKGALS AVERRRVEVK VSGIIARKSV HEPMQTGLKA VDSPVLIGRG QWEPIIGDRQ TGKTAIAIDT IPNQKPINAQ GTFDSERLFC VYVAIGQKRS TVAQLVKIPS EAGAPEYFII // ID AJ548854_1 STANDARD; PRT; 200 AA. AC AJ548854; DT Tue Jul 21 07:07:26 2009 DE Cyathea poeppigii mitochondrial partial atp1 gene for ATPase alpha OS mitochondrion Cyathea poeppigii OC Cyathea poeppigii RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70242.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 88/2 FT EDITING : 94 *(Tga) -> R(Cga) FT EDITING : 115 *(Taa) -> Q(Caa) FT EDITING : 139 *(Tga) -> R(Cga) FT EDITING : 154 *(Tag) -> Q(Cag) FT EDITING : 160 *(Tag) -> Q(Cag) FT EDITING : 177 *(Taa) -> Q(Caa) FT EDITING : 184 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 601 NT; CD 1 atcggttggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattt gccagcggtg tgaaaggaat ggcttcgaat CD 101 tcagagaatg agaatgtagg aattgttata tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgccaggt tgtgtagttg acgcgttagg agtacctatt CD 251 gatggaaaag gtgctttgag cgcggtagaa Tgaagacgtg tagaagtcaa CD 301 agtctctggg attattgcgc gtaaatctgt ccacgaacct atgTaaacgg CD 351 ggttaaaagc ggtggatagc ccagtcctta taggtcgtgg tcaatgggaa CD 401 ccgataatcg gcgacTgaca aaccggaaag actgctatag ctattgatac CD 451 cattccgaac Tagaaaccaa tcaacgcaTa gggcaccttc gatagtgaaa CD 501 gattgttttg cgtgtacgta gcgattggaT aaaaacgttc aaccgtggca CD 551 Taattggtta agattccctc ggaagccggt gctccggaat atttcattac CD 601 t FT EDITED CDNA CD 1 atcggttggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattt gccagcggtg tgaaaggaat ggcttcgaat CD 101 tcagagaatg agaatgtagg aattgttata tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgccaggt tgtgtagttg acgcgttagg agtacctatt CD 251 gatggaaaag gtgctttgag cgcggtagaa Cgaagacgtg tagaagtcaa CD 301 agtctctggg attattgcgc gtaaatctgt ccacgaacct atgCaaacgg CD 351 ggttaaaagc ggtggatagc ccagtcctta taggtcgtgg tcaatgggaa CD 401 ccgataatcg gcgacCgaca aaccggaaag actgctatag ctattgatac CD 451 cattccgaac Cagaaaccaa tcaacgcaCa gggcaccttc gatagtgaaa CD 501 gattgttttg cgtgtacgta gcgattggaC aaaaacgttc aaccgtggca CD 551 Caattggtta agattccctc ggaagccggt gctccggaat atttcattac CD 601 t SQ SEQUENCE 200 AA; SVGDGIARVY GSNKIQAGEM VEFASGVKGM ASNSENENVG IVISGSDTAI KEGDMVKRTG SIVDVPVGKA MPGCVVDALG VPIDGKGALS AVERRRVEVK VSGIIARKSV HEPMQTGLKA VDSPVLIGRG QWEPIIGDRQ TGKTAIAIDT IPNQKPINAQ GTFDSERLFC VYVAIGQKRS TVAQLVKIPS EAGAPEYFIT // ID AJ548855_1 STANDARD; PRT; 99 AA. AC AJ548855; DT Tue Jul 21 07:07:26 2009 DE Plagiogyria japonica mitochondrial partial atp1 gene for ATPase OS mitochondrion Plagiogyria japonica OC Plagiogyria japonica RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70243.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 88/2 FT EDITING : 94 *(Tga) -> R(Cga) FT CODON_START : 2 CL CDNALEN 297 NT; CD 1 atcagttggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattt gccagcggtg tgaaaggaat ggcttcgaat CD 101 tctgagaatg agaatgtagg aattgttata tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgccaggt tgtgtagctg atgcgtcagg agtacctatt CD 251 gatggaaaag gtgctttgag cgcggtggaa Tgaagacgtg tagaagt FT EDITED CDNA CD 1 atcagttggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattt gccagcggtg tgaaaggaat ggcttcgaat CD 101 tctgagaatg agaatgtagg aattgttata tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgccaggt tgtgtagctg atgcgtcagg agtacctatt CD 251 gatggaaaag gtgctttgag cgcggtggaa Cgaagacgtg tagaagt SQ SEQUENCE 99 AA; SVGDGIARVY GSNKIQAGEM VEFASGVKGM ASNSENENVG IVISGSDTAI KEGDMVKRTG SIVDVPVGKA MPGCVADASG VPIDGKGALS AVERRRVEV // ID AJ548856_1 STANDARD; PRT; 200 AA. AC AJ548856; DT Tue Jul 21 07:07:26 2009 DE Phanerosorus sarmentosus mitochondrial partial atp1 gene for ATPase OS mitochondrion Phanerosorus sarmentosus OC Phanerosorus sarmentosus RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70244.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 88/2 FT EDITING : 132 *(Tga) -> R(Cga) FT CODON_START : 2 CL CDNALEN 601 NT; CD 1 atcggttggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattt gccagcggtg tgaaaggaat ggctttgaat CD 101 tctgagaatg agaatgtagg aattgttgta tccggtagtg atactgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgctcctg CD 201 taggaaaggc catgtcaggt tgtgtagttg atgcgttagg agtatctatt CD 251 gatggaaaag gtgctttgag cgcggtggaa tggagacgtg tagaagttaa CD 301 agcccctggg attattgcac gtaaatctgt ccacgaacct atgcaaacgg CD 351 ggttaaaagc ggtggatagc ctggttccta taggtcgtgg tcaaTgagaa CD 401 ctgataatcg gcgaccgaca aactggaaag actgctatag ctattgatac CD 451 cattctgaac caaaaattaa tcaacgcaca gggcacctct gatagtgaaa CD 501 gattgtttcg tgtgtacgta gcgattggac agaaacgttc aactgtggca CD 551 caattagtta agattctctc ggaagccggt gctttggaat attccattat CD 601 t FT EDITED CDNA CD 1 atcggttggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattt gccagcggtg tgaaaggaat ggctttgaat CD 101 tctgagaatg agaatgtagg aattgttgta tccggtagtg atactgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgctcctg CD 201 taggaaaggc catgtcaggt tgtgtagttg atgcgttagg agtatctatt CD 251 gatggaaaag gtgctttgag cgcggtggaa tggagacgtg tagaagttaa CD 301 agcccctggg attattgcac gtaaatctgt ccacgaacct atgcaaacgg CD 351 ggttaaaagc ggtggatagc ctggttccta taggtcgtgg tcaaCgagaa CD 401 ctgataatcg gcgaccgaca aactggaaag actgctatag ctattgatac CD 451 cattctgaac caaaaattaa tcaacgcaca gggcacctct gatagtgaaa CD 501 gattgtttcg tgtgtacgta gcgattggac agaaacgttc aactgtggca CD 551 caattagtta agattctctc ggaagccggt gctttggaat attccattat CD 601 t SQ SEQUENCE 200 AA; SVGDGIARVY GSNKIQAGEM VEFASGVKGM ALNSENENVG IVVSGSDTAI KEGDMVKRTG SIVDAPVGKA MSGCVVDALG VSIDGKGALS AVEWRRVEVK APGIIARKSV HEPMQTGLKA VDSLVPIGRG QRELIIGDRQ TGKTAIAIDT ILNQKLINAQ GTSDSERLFR VYVAIGQKRS TVAQLVKILS EAGALEYSII // ID AJ548858_1 STANDARD; PRT; 200 AA. AC AJ548858; DT Tue Jul 21 07:07:26 2009 DE Hymenophyllum hirsutum mitochondrial partial atp1 gene for ATPase OS mitochondrion Hymenophyllum hirsutum OC Hymenophyllum hirsutum RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70246.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 88/2 FT EDITING : 115 *(Taa) -> Q(Caa) FT EDITING : 131 *(Taa) -> Q(Caa) FT EDITING : 132 *(Tga) -> R(Cga) FT EDITING : 139 *(Tga) -> R(Cga) FT EDITING : 154 *(Tag) -> Q(Cag) FT EDITING : 177 *(Tag) -> Q(Cag) FT EDITING : 184 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 601 NT; CD 1 atcggttggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 ctggggaaat ggtagaattt gccagcggtg tgaaaggaat ggctttgaat CD 101 tctgagaatg agaatgtagg aattgttata tccggtagtg atactgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgttaggt tgtgtagttg atgcgttagg agtacttatt CD 251 gatggaaaag gtgctttgag cgcggtagaa tgaagacgtg tagaagttaa CD 301 agtccctggg attattgcac gtaaatctgt ccacgaacct atgTaaacgg CD 351 ggttaaaagc ggtggatagc ccggttccta taggtcgtgg tTaaTgagaa CD 401 ccgataatcg gcgacTgaca aaccggaaag actgctatag ctattgatac CD 451 cattcngaac Tagaaaccaa tcaacgcaca gggcacctcc gatagtgaaa CD 501 gattgttttg tgtgtacgta gcgattggaT agaaacgttc aaccgtggca CD 551 Taattagtta agattctctc ggaagccggt gctttggaat attccattat CD 601 t FT EDITED CDNA CD 1 atcggttggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 ctggggaaat ggtagaattt gccagcggtg tgaaaggaat ggctttgaat CD 101 tctgagaatg agaatgtagg aattgttata tccggtagtg atactgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgttaggt tgtgtagttg atgcgttagg agtacttatt CD 251 gatggaaaag gtgctttgag cgcggtagaa tgaagacgtg tagaagttaa CD 301 agtccctggg attattgcac gtaaatctgt ccacgaacct atgCaaacgg CD 351 ggttaaaagc ggtggatagc ccggttccta taggtcgtgg tCaaCgagaa CD 401 ccgataatcg gcgacCgaca aaccggaaag actgctatag ctattgatac CD 451 cattcngaac Cagaaaccaa tcaacgcaca gggcacctcc gatagtgaaa CD 501 gattgttttg tgtgtacgta gcgattggaC agaaacgttc aaccgtggca CD 551 Caattagtta agattctctc ggaagccggt gctttggaat attccattat CD 601 t SQ SEQUENCE 200 AA; SVGDGIARVY GSNKIQAGEM VEFASGVKGM ALNSENENVG IVISGSDTAI KEGDMVKRTG SIVDVPVGKA MLGCVVDALG VLIDGKGALS AVE*RRVEVK VPGIIARKSV HEPMQTGLKA VDSPVPIGRG QREPIIGDRQ TGKTAIAIDT IXNQKPINAQ GTSDSERLFC VYVAIGQKRS TVAQLVKILS EAGALEYSII // ID AJ548859_1 STANDARD; PRT; 200 AA. AC AJ548859; DT Tue Jul 21 07:07:26 2009 DE Osmunda regalis mitochondrial partial atp1 gene for ATPase alpha OS mitochondrion Osmunda regalis OC Osmunda regalis RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70247.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 88/2 FT EDITING : 115 *(Taa) -> Q(Caa) FT EDITING : 139 *(Tga) -> R(Cga) FT EDITING : 154 *(Tag) -> Q(Cag) FT EDITING : 177 *(Tag) -> Q(Cag) FT EDITING : 184 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 601 NT; CD 1 atcagttgga gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 ctggggaaat ggtagaattt gccggcggtg tgaaaggaat ggctttgaat CD 101 tttgagaatg agaatgtagg gattgttata tccggtagtg atactgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgttgggt tgtgtggttg atgcgttagg agtacttatt CD 251 gatggaaaag gtgcttcgag cgcggtagaa cgaagacgtg tagaagttaa CD 301 agcctctggg attattgcac gtaaatctgt ccacgaactt atgTaaacgg CD 351 ggttaaaagc ggtggatagc ccggttccta taggtcgtgg tcaacgagaa CD 401 ccgataatcg gcgacTgaca aactggaaag actgctatag ctattgatac CD 451 cattccgaac Tagaaaccaa tcaacgcaca gggcacctcc gatagtgaaa CD 501 gattgtttcg tgtgtacgta gcgattggaT agaaacgttc aaccgtggca CD 551 Taattagtta agattctctc ggaagccggt gctttggaat attccattat CD 601 t FT EDITED CDNA CD 1 atcagttgga gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 ctggggaaat ggtagaattt gccggcggtg tgaaaggaat ggctttgaat CD 101 tttgagaatg agaatgtagg gattgttata tccggtagtg atactgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgttgggt tgtgtggttg atgcgttagg agtacttatt CD 251 gatggaaaag gtgcttcgag cgcggtagaa cgaagacgtg tagaagttaa CD 301 agcctctggg attattgcac gtaaatctgt ccacgaactt atgCaaacgg CD 351 ggttaaaagc ggtggatagc ccggttccta taggtcgtgg tcaacgagaa CD 401 ccgataatcg gcgacCgaca aactggaaag actgctatag ctattgatac CD 451 cattccgaac Cagaaaccaa tcaacgcaca gggcacctcc gatagtgaaa CD 501 gattgtttcg tgtgtacgta gcgattggaC agaaacgttc aaccgtggca CD 551 Caattagtta agattctctc ggaagccggt gctttggaat attccattat CD 601 t SQ SEQUENCE 200 AA; SVGDGIARVY GSNKIQAGEM VEFAGGVKGM ALNFENENVG IVISGSDTAI KEGDMVKRTG SIVDVPVGKA MLGCVVDALG VLIDGKGASS AVERRRVEVK ASGIIARKSV HELMQTGLKA VDSPVPIGRG QREPIIGDRQ TGKTAIAIDT IPNQKPINAQ GTSDSERLFR VYVAIGQKRS TVAQLVKILS EAGALEYSII // ID AJ548860_1 STANDARD; PRT; 200 AA. AC AJ548860; DT Tue Jul 21 07:07:26 2009 DE Marsilea mutica mitochondrial partial atp1 gene for ATPase alpha OS mitochondrion Marsilea mutica OC Marsilea mutica RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70248.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 88/2 FT EDITING : 94 *(Tga) -> R(Cga) FT EDITING : 115 *(Taa) -> Q(Caa) FT EDITING : 131 *(Taa) -> Q(Caa) FT EDITING : 139 *(Tga) -> R(Cga) FT EDITING : 154 *(Tag) -> Q(Cag) FT EDITING : 160 *(Tag) -> Q(Cag) FT EDITING : 177 *(Taa) -> Q(Caa) FT EDITING : 184 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 601 NT; CD 1 atcggtcggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattt gccagcggtg tgaaaggaat ggcttcgaat CD 101 tctgagaatg agaatgtagg aattgttata tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgccaggt tgtgtagttg atgcgttagg agtacctatt CD 251 gatggaaaag gtgctttgag cgcggtagaa Tgaagacgtg tagaagtcaa CD 301 agtccctggg attattgcac gtaaatctgt ccacgaacct atgTaaacgg CD 351 ggttaaaagc ggtggatagc ccggtcctta taggtcgtgg tTaatgggaa CD 401 ccgataatcg gcgacTgaca aaccggaaag actgctatag ctattgatat CD 451 cattccgaac Tagaaaccaa tcaacgcaTa gggcaccttc gatagtgaaa CD 501 gattgtttcg cgtgtacgta gcgattggaT aaaaatgttc aaccgtggca CD 551 Taattggtta agattccctc ggaagccggt gctccggaat atctcattac CD 601 t FT EDITED CDNA CD 1 atcggtcggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 cgggggaaat ggtagaattt gccagcggtg tgaaaggaat ggcttcgaat CD 101 tctgagaatg agaatgtagg aattgttata tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgccaggt tgtgtagttg atgcgttagg agtacctatt CD 251 gatggaaaag gtgctttgag cgcggtagaa Cgaagacgtg tagaagtcaa CD 301 agtccctggg attattgcac gtaaatctgt ccacgaacct atgCaaacgg CD 351 ggttaaaagc ggtggatagc ccggtcctta taggtcgtgg tCaatgggaa CD 401 ccgataatcg gcgacCgaca aaccggaaag actgctatag ctattgatat CD 451 cattccgaac Cagaaaccaa tcaacgcaCa gggcaccttc gatagtgaaa CD 501 gattgtttcg cgtgtacgta gcgattggaC aaaaatgttc aaccgtggca CD 551 Caattggtta agattccctc ggaagccggt gctccggaat atctcattac CD 601 t SQ SEQUENCE 200 AA; SVGDGIARVY GSNKIQAGEM VEFASGVKGM ASNSENENVG IVISGSDTAI KEGDMVKRTG SIVDVPVGKA MPGCVVDALG VPIDGKGALS AVERRRVEVK VPGIIARKSV HEPMQTGLKA VDSPVLIGRG QWEPIIGDRQ TGKTAIAIDI IPNQKPINAQ GTFDSERLFR VYVAIGQKCS TVAQLVKIPS EAGAPEYLIT // ID AJ548861_1 STANDARD; PRT; 198 AA. AC AJ548861; DT Tue Jul 21 07:07:26 2009 DE Angiopteris evecta mitochondrial partial atp1 gene for ATPase alpha OS mitochondrion Angiopteris evecta OC Angiopteris evecta RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAD70249.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 86/1 FT EDITING : 10 S(tCg) -> L(tTg) FT EDITING : 150 S(tCg) -> L(tTg) FT CODON_START : 1 CL CDNALEN 594 NT; CD 1 ggagatggaa ttgcacgtgt ttatggatCg aacaagattc aagcggggga CD 51 aatggtagaa tttgccagcg gggtgaaagg aatggctttg aatctcgaga CD 101 atgagaatgt cggaattgtg gtattcggta gtgatactgc cattaaagaa CD 151 ggagatatgg tcaagcgcac tggatctatt gtggatgttc ctgtaggaaa CD 201 ggccttgtta ggtcgtgtgg ttgatgcgtt aggagtacct attgatggaa CD 251 aaggtgcttt aagcgcggtg gaacgaagac gtgtagaagt gaaagcccct CD 301 gggattattg cacgtaaatc tgtccacgaa cctatgcaaa cagggttaaa CD 351 agcagtagat agcctggttc ctataggtcg tggtcaacga gaactgataa CD 401 tcggagaccg acaaactgga aagactgcta tagctattga taccatatCg CD 451 aaccagaaac caatcaacgc acagggcacc tctgataggg aaggagtttt CD 501 ttgtgtgtat gtagcgattg gccagaaacg ttcaaccgtg gcacaattgg CD 551 ttaagattct ctccgaagcc ggtgctttgg aatattccat tatt FT EDITED CDNA CD 1 ggagatggaa ttgcacgtgt ttatggatTg aacaagattc aagcggggga CD 51 aatggtagaa tttgccagcg gggtgaaagg aatggctttg aatctcgaga CD 101 atgagaatgt cggaattgtg gtattcggta gtgatactgc cattaaagaa CD 151 ggagatatgg tcaagcgcac tggatctatt gtggatgttc ctgtaggaaa CD 201 ggccttgtta ggtcgtgtgg ttgatgcgtt aggagtacct attgatggaa CD 251 aaggtgcttt aagcgcggtg gaacgaagac gtgtagaagt gaaagcccct CD 301 gggattattg cacgtaaatc tgtccacgaa cctatgcaaa cagggttaaa CD 351 agcagtagat agcctggttc ctataggtcg tggtcaacga gaactgataa CD 401 tcggagaccg acaaactgga aagactgcta tagctattga taccatatTg CD 451 aaccagaaac caatcaacgc acagggcacc tctgataggg aaggagtttt CD 501 ttgtgtgtat gtagcgattg gccagaaacg ttcaaccgtg gcacaattgg CD 551 ttaagattct ctccgaagcc ggtgctttgg aatattccat tatt SQ SEQUENCE 198 AA; GDGIARVYGL NKIQAGEMVE FASGVKGMAL NLENENVGIV VFGSDTAIKE GDMVKRTGSI VDVPVGKALL GRVVDALGVP IDGKGALSAV ERRRVEVKAP GIIARKSVHE PMQTGLKAVD SLVPIGRGQR ELIIGDRQTG KTAIAIDTIL NQKPINAQGT SDREGVFCVY VAIGQKRSTV AQLVKILSEA GALEYSII // ID AJ548863_1 STANDARD; PRT; 97 AA. AC AJ548863; DT Tue Jul 21 07:07:26 2009 DE Azolla filiculoides mitochondrial partial atp1 gene for ATPase OS mitochondrion Azolla filiculoides OC Azolla filiculoides RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70251.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 88/2 FT EDITING : 94 *(Tga) -> R(Cga) FT CODON_START : 2 CL CDNALEN 291 NT; CD 1 atcggttggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 caggagaaat ggtagaattc gccagcggtg tgaaaggaat ggcttcgaat CD 101 tctgagaatg agaatgtagg aattgttata tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gacgttcttg CD 201 taggaaaggc catgccgggt tgtgtagttg atgcgttagg agtactcatt CD 251 gatggaaaag gtgctttgag cgcggtagaa Tgaagacgtg t FT EDITED CDNA CD 1 atcggttggg gatggaattg cacgtgttta tggatcgaac aagattcaag CD 51 caggagaaat ggtagaattc gccagcggtg tgaaaggaat ggcttcgaat CD 101 tctgagaatg agaatgtagg aattgttata tccggtagtg ataccgccat CD 151 taaagaagga gatatggtca agcgcactgg atctattgtg gacgttcttg CD 201 taggaaaggc catgccgggt tgtgtagttg atgcgttagg agtactcatt CD 251 gatggaaaag gtgctttgag cgcggtagaa Cgaagacgtg t SQ SEQUENCE 97 AA; SVGDGIARVY GSNKIQAGEM VEFASGVKGM ASNSENENVG IVISGSDTAI KEGDMVKRTG SIVDVLVGKA MPGCVVDALG VLIDGKGALS AVERRRV // ID AJ548869_1 STANDARD; PRT; 200 AA. AC AJ548869; DT Tue Jul 21 07:07:26 2009 DE Isoetes flaccida mitochondrial partial atp1 gene for ATPase alpha OS mitochondrion Isoetes flaccida OC Isoetes flaccida RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70257.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 601 FT DIRECTIONS : positive FT EDITING : 16 *(Taa) -> Q(Caa) FT EDITING : 131 *(Taa) -> Q(Caa) FT EDITING : 132 *(Tga) -> R(Cga) FT EDITING : 154 *(Tag) -> Q(Cag) FT EDITING : 177 *(Tag) -> Q(Cag) FT EDITING : 184 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 601 NT; CD 1 cccagtggga gatggaattg cacgtgttta tggatcgaac aggattTaag CD 51 ctggggaacc agttgaattt gctggcggtg cgaaaggaac ggcttcgaat CD 101 ccggaaaccg acaatgtagg agttgttata tttggtagcg atactgccac CD 151 tagagaggga gatatggtca agcgcacggg gttcaccgtc gacgttcctg CD 201 taggaaaggc catgttaggt tgtgtggttg atgcgtcagg agtgcctatt CD 251 gatgggaagg gtgctcgtcg cgccgacgaa agaagacgtg tagaagcgaa CD 301 agctcctggg attattgcac gtaaatccgc gcacgaaccc atggaaacgg CD 351 gattaaaagc agtagatagc ccggttccta caggccgtgg tTaaTgagaa CD 401 ccaataatag gagacagaca aactggaaag actgctatag ctattgatac CD 451 cataccgaac Tagaaaagaa tcaacgcaca gggcacctct gatagtgaaa CD 501 gatcgtatcg tgtgcatgca gcgatcgggT agaaatgcct aatcgtggta CD 551 Taattagtta agattcctcc agaagcgggt gttttagaat atcgcatcac CD 601 a FT EDITED CDNA CD 1 cccagtggga gatggaattg cacgtgttta tggatcgaac aggattCaag CD 51 ctggggaacc agttgaattt gctggcggtg cgaaaggaac ggcttcgaat CD 101 ccggaaaccg acaatgtagg agttgttata tttggtagcg atactgccac CD 151 tagagaggga gatatggtca agcgcacggg gttcaccgtc gacgttcctg CD 201 taggaaaggc catgttaggt tgtgtggttg atgcgtcagg agtgcctatt CD 251 gatgggaagg gtgctcgtcg cgccgacgaa agaagacgtg tagaagcgaa CD 301 agctcctggg attattgcac gtaaatccgc gcacgaaccc atggaaacgg CD 351 gattaaaagc agtagatagc ccggttccta caggccgtgg tCaaCgagaa CD 401 ccaataatag gagacagaca aactggaaag actgctatag ctattgatac CD 451 cataccgaac Cagaaaagaa tcaacgcaca gggcacctct gatagtgaaa CD 501 gatcgtatcg tgtgcatgca gcgatcgggC agaaatgcct aatcgtggta CD 551 Caattagtta agattcctcc agaagcgggt gttttagaat atcgcatcac CD 601 a SQ SEQUENCE 200 AA; PVGDGIARVY GSNRIQAGEP VEFAGGAKGT ASNPETDNVG VVIFGSDTAT REGDMVKRTG FTVDVPVGKA MLGCVVDASG VPIDGKGARR ADERRRVEAK APGIIARKSA HEPMETGLKA VDSPVPTGRG QREPIIGDRQ TGKTAIAIDT IPNQKRINAQ GTSDSERSYR VHAAIGQKCL IVVQLVKIPP EAGVLEYRIT // ID AJ548870_1 STANDARD; PRT; 202 AA. AC AJ548870; DT Tue Jul 21 07:07:26 2009 DE Botrychium lunaria mitochondrial partial atp1 gene for ATPase alpha OS mitochondrion Botrychium lunaria (moonwort) OC Botrychium lunaria RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70258.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 607 FT DIRECTIONS : positive FT EDITING : 16 *(Taa) -> Q(Caa) FT CODON_START : 2 CL CDNALEN 607 NT; CD 1 accagttgga gatggaattg cacgtgttta tggatcgaac aagattTaag CD 51 ctggggaaat ggtagaattt gccagcggtg tgaaaggaat ggcttcgaat CD 101 cttgagaatg agaatgtagg gatcgtgata ttcggtagtg atactgccat CD 151 taaggaggga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgttaggt cgtgtggttg atgcgttagg ggtccctatt CD 251 gatggaaaag gtgctttaag cgcggtagaa agagaacgtg tagaagtgaa CD 301 agcacctggt attattgcac gtaaatccgt ccacgaacct atgcaaaccg CD 351 gtttaaaagc cgtggatagc ccggttccta taggtcgtgg tcaacgagaa CD 401 ctgataatcg gagaccgaca aacaggaaag actgctatag ctattgatac CD 451 cacatcaaac cagaaaccaa tcaacgcact ttcttctggc gcctctgata CD 501 gtgaaagatt gtttcgtgcg tatgtagcaa ttggacagaa acgttcaacc CD 551 gtggcacaat tagttaagat tcctccagaa gccggtgctt tagaatattc CD 601 cattact FT EDITED CDNA CD 1 accagttgga gatggaattg cacgtgttta tggatcgaac aagattCaag CD 51 ctggggaaat ggtagaattt gccagcggtg tgaaaggaat ggcttcgaat CD 101 cttgagaatg agaatgtagg gatcgtgata ttcggtagtg atactgccat CD 151 taaggaggga gatatggtca agcgcactgg atctattgtg gatgttcctg CD 201 taggaaaggc catgttaggt cgtgtggttg atgcgttagg ggtccctatt CD 251 gatggaaaag gtgctttaag cgcggtagaa agagaacgtg tagaagtgaa CD 301 agcacctggt attattgcac gtaaatccgt ccacgaacct atgcaaaccg CD 351 gtttaaaagc cgtggatagc ccggttccta taggtcgtgg tcaacgagaa CD 401 ctgataatcg gagaccgaca aacaggaaag actgctatag ctattgatac CD 451 cacatcaaac cagaaaccaa tcaacgcact ttcttctggc gcctctgata CD 501 gtgaaagatt gtttcgtgcg tatgtagcaa ttggacagaa acgttcaacc CD 551 gtggcacaat tagttaagat tcctccagaa gccggtgctt tagaatattc CD 601 cattact SQ SEQUENCE 202 AA; PVGDGIARVY GSNKIQAGEM VEFASGVKGM ASNLENENVG IVIFGSDTAI KEGDMVKRTG SIVDVPVGKA MLGRVVDALG VPIDGKGALS AVERERVEVK APGIIARKSV HEPMQTGLKA VDSPVPIGRG QRELIIGDRQ TGKTAIAIDT TSNQKPINAL SSGASDSERL FRAYVAIGQK RSTVAQLVKI PPEAGALEYS IT // ID AJ548872_1 STANDARD; PRT; 201 AA. AC AJ548872; DT Tue Jul 21 07:07:26 2009 DE Tmesipteris lanceolata mitochondrial partial atp1 gene for ATPase OS mitochondrion Tmesipteris lanceolata OC Tmesipteris lanceolata RN [1] RL Mol. Phylogenet. Evol. 36 (3), 484-493 (2005) RL PUBMED 15922630 FT N-terminal not determined FT C-terminal not determined FT GENE : atp1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAD70260.1 FT PROTEIN_NAME : ATPase alpha subunit FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 1 - 604 FT DIRECTIONS : positive FT EDITING : 94 *(Tga) -> R(Cga) FT CODON_START : 2 CL CDNALEN 604 NT; CD 1 ctcagttgga gatggaattg cacgtgttta tggatcgaac aagattaaag CD 51 ctggggaaat ggtcgaattt gccagcggtg tgaagggaat ggctttgaat CD 101 cttgaaaatg aggatgtagg aattgttcta tttggtagtg atactgccat CD 151 taaagagggg gatatggtca agcgcaccgg atctattgtg gatgttcctg CD 201 tgggaaaggc catgttgggt cgtgtggttg atgcgttagg agtacctatt CD 251 gatggtaaag gtgctttaag cgctgtagaa Tgacgacgtg tggaagtgaa CD 301 agcccccggg attattgcac ggaaatccgt ccacgaacct atgcaaaccg CD 351 gtttaaaagc cgtggatagc ctagtcccta taggtcgtgg tcaacgagaa CD 401 ctgatcatcg gagaccgaca aacgggaaag acggctatag ctattgatac CD 451 catattgaac cagaaaccaa tcaacttagc acagggcacc tccgatagtg CD 501 aaagattgtt ctgtgtgtat gtagcgattg gacagaaacg ttcaaccgtg CD 551 gcacaattag ttaagattcc ctcggaagcc ggtgctttag aatattccat CD 601 agta FT EDITED CDNA CD 1 ctcagttgga gatggaattg cacgtgttta tggatcgaac aagattaaag CD 51 ctggggaaat ggtcgaattt gccagcggtg tgaagggaat ggctttgaat CD 101 cttgaaaatg aggatgtagg aattgttcta tttggtagtg atactgccat CD 151 taaagagggg gatatggtca agcgcaccgg atctattgtg gatgttcctg CD 201 tgggaaaggc catgttgggt cgtgtggttg atgcgttagg agtacctatt CD 251 gatggtaaag gtgctttaag cgctgtagaa Cgacgacgtg tggaagtgaa CD 301 agcccccggg attattgcac ggaaatccgt ccacgaacct atgcaaaccg CD 351 gtttaaaagc cgtggatagc ctagtcccta taggtcgtgg tcaacgagaa CD 401 ctgatcatcg gagaccgaca aacgggaaag acggctatag ctattgatac CD 451 catattgaac cagaaaccaa tcaacttagc acagggcacc tccgatagtg CD 501 aaagattgtt ctgtgtgtat gtagcgattg gacagaaacg ttcaaccgtg CD 551 gcacaattag ttaagattcc ctcggaagcc ggtgctttag aatattccat CD 601 agta SQ SEQUENCE 201 AA; SVGDGIARVY GSNKIKAGEM VEFASGVKGM ALNLENEDVG IVLFGSDTAI KEGDMVKRTG SIVDVPVGKA MLGRVVDALG VPIDGKGALS AVERRRVEVK APGIIARKSV HEPMQTGLKA VDSLVPIGRG QRELIIGDRQ TGKTAIAIDT ILNQKPINLA QGTSDSERLF CVYVAIGQKR STVAQLVKIP SEAGALEYSI V // ID AJ865075_1 STANDARD; PRT; 191 AA. AC AJ865075; DT Tue Jul 21 07:07:31 2009 DE Zea mays mitochondrial mRNA for NADH dehydrogenase, subunit 9 (nad9 OS mitochondrion Zea mays OC Zea mays RN [1] RL Endocyt. Cell Res. 15 (2), 551-560 (2004) FT Full length CDS FT GENE : nad9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAI23792.1 FT PROTEIN_NAME : NADH dehydrogenase, subunit 9 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 573 FT DIRECTIONS : positive FT EDITING : 31 S(tCt) -> F(tTt) FT EDITING : 38 P(cCa) -> L(cTa) FT EDITING : 56 S(tCg) -> L(tTg) FT EDITING : 64 H(Cat) -> Y(Tat) FT EDITING : 75 H(Cat) -> Y(Tat) FT EDITING : 100 P(Ccg) -> S(Tcg) FT EDITING : 104 P(cCa) -> L(cTa) FT EDITING : 110 R(Cgg) -> W(Tgg) FT EDITING : 119 S(tCt) -> F(tTt) FT EDITING : 123 S(tCc) -> F(tTc) FT EDITING : 133 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 573 NT; CD 1 atggataacc aatccatttt caaatatagt tgggagattt tacccaagaa CD 51 atgggtacat aaaatgaaaa gatcggaaca tgggaataga tCttatacca CD 101 atactgacta ccCatttcca ttgttgtgct ttctaaaatg gcatacctat CD 151 acaagggttc aagtttCgat cgatatttgc ggagtggatC atccctctcg CD 201 aaaacgcaga tttgaagttg tcCataattt actgagtact cggtataact CD 251 cacgcattcg tgtacaaaca agtgcggacg aagtaacacg aatatctCcg CD 301 gtagtcagtc Catttccatc agccggcCgg tgggagcgag aagtatggga CD 351 tatgtCtggt gtttcttCca tcaatcatcc ggatttacgc cgtatatCaa CD 401 ctgattatgg tttcgagggt catccattac gaaaagactt tcctctgagt CD 451 ggatatgtgg aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 acccattgag atgacccaag aatttcgcta ttttgatttt gctagtcctt CD 551 gggaacagcg tagcgacgga taa FT EDITED CDNA CD 1 atggataacc aatccatttt caaatatagt tgggagattt tacccaagaa CD 51 atgggtacat aaaatgaaaa gatcggaaca tgggaataga tTttatacca CD 101 atactgacta ccTatttcca ttgttgtgct ttctaaaatg gcatacctat CD 151 acaagggttc aagtttTgat cgatatttgc ggagtggatT atccctctcg CD 201 aaaacgcaga tttgaagttg tcTataattt actgagtact cggtataact CD 251 cacgcattcg tgtacaaaca agtgcggacg aagtaacacg aatatctTcg CD 301 gtagtcagtc Tatttccatc agccggcTgg tgggagcgag aagtatggga CD 351 tatgtTtggt gtttcttTca tcaatcatcc ggatttacgc cgtatatTaa CD 401 ctgattatgg tttcgagggt catccattac gaaaagactt tcctctgagt CD 451 ggatatgtgg aagtacgcta tgatgatcca gagaaacgtg tggtttctga CD 501 acccattgag atgacccaag aatttcgcta ttttgatttt gctagtcctt CD 551 gggaacagcg tagcgacgga taa SQ SEQUENCE 191 AA; MDNQSIFKYS WEILPKKWVH KMKRSEHGNR FYTNTDYLFP LLCFLKWHTY TRVQVLIDIC GVDYPSRKRR FEVVYNLLST RYNSRIRVQT SADEVTRISS VVSLFPSAGW WEREVWDMFG VSFINHPDLR RILTDYGFEG HPLRKDFPLS GYVEVRYDDP EKRVVSEPIE MTQEFRYFDF ASPWEQRSDG * // ID AJ890080_1 STANDARD; PRT; 395 AA. AC AJ890080; DT Tue Jul 21 07:07:31 2009 DE Nicotiana sylvestris mitochondrial nad7 gene for NADH-ubiquinone OS mitochondrion Nicotiana sylvestris (wood tobacco) OC Nicotiana sylvestris RN [1] RL Unpublished FT Full length CDS FT GENE : nad7 FT NOTE : complex I FT LOCUS_TAG : FT PROTEIN_ID : CAI64462.1 FT PROTEIN_NAME : NADH-Ubiquinone oxidoreductase subunit 7 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 1185 FT DIRECTIONS : positive FT EDITING : 13 S(tCg) -> L(tTg) FT EDITING : 26 S(tCa) -> L(tTa) FT EDITING : 28 S(tCa) -> L(tTa) FT EDITING : 33 N(aaC) -> N(aaT) FT EDITING : 47 L(ctC) -> L(ctT) FT EDITING : 67 F(ttC) -> F(ttT) FT EDITING : 70 S(tCa) -> L(tTa) FT EDITING : 82 H(Cat) -> Y(Tat) FT EDITING : 84 S(tCa) -> L(tTa) FT EDITING : 106 R(Cgt) -> C(Tgt) FT EDITING : 128 S(tCa) -> L(tTa) FT EDITING : 193 S(tCa) -> L(tTa) FT EDITING : 242 H(Cat) -> Y(Tat) FT EDITING : 247 P(CCt) -> F(TTt) FT EDITING : 257 R(Cgc) -> C(Tgc) FT EDITING : 309 S(tCa) -> L(tTa) FT EDITING : 315 P(cCt) -> L(cTt) FT EDITING : 325 P(cCt) -> L(cTt) FT EDITING : 350 P(ccC) -> P(ccT) FT EDITING : 353 R(Cgt) -> C(Tgt) FT EDITING : 363 S(tCa) -> L(tTa) FT EDITING : 368 S(tCt) -> F(tTt) FT EDITING : 375 P(cCa) -> L(cTa) FT EDITING : 381 I(atC) -> I(atT) FT EDITING : 389 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 1185 NT; CD 1 atgacgacta agaacaggca aatcaaaaat ttcacttCga atttcggacc CD 51 tcaacatcct gctgctcatg gtgtttCacg atCagtattg gaaatgaaCg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggattact Ccatagaggg CD 151 actgagaaat taattgagta caaaacttat cttcaagctt taccttattt CD 201 CgatcgttCa gactatgttt ctatgatggc ccaagaacac gctCattctt CD 251 Cagccgtaga gagacttttg aattgcgagg taccattacg agctcaatat CD 301 atacgagtgt tattcCgtga aataactcga attttaaatc atttacttgc CD 351 tttaactact catgctatgg atgtaggagc atCaactccg ttcctgtggg CD 401 cttttgagga gcgggagaaa ttgttggaat tctatgaaag agtctcggga CD 451 gccaggatgc atgccagttt catacgacca ggtggagtgg cacaagatct CD 501 gcctcttggc ttatgtatag atattgattc attcacacaa caatttgctt CD 551 ctcgtatcga cgaattagaa gagatgtCaa ccggcaaccg tatctggaaa CD 601 caacgattag tggatattgg tactgtcact gcacagcaag caaaggattg CD 651 gggattcagt ggtgtaatgt taagaggttc tggggtatgc tgggatttgc CD 701 gaaaagcagc accttacgat gttCatgacc aattggatCC tgacatacca CD 751 gtaggtacca gaggagatCg ctatgatcgt tactgtattc gtatcgaaga CD 801 gatgcgacaa agtgttcgga tcattgtgca atgtcttaat caaatgccta CD 851 gtggcatgat caaagccgat gatcgtaagc tatgtcctcc atcacgatct CD 901 cgaatgaaac tatccatgga atcctCaatt caccatttcg aacCttatac CD 951 agaaggtttt tccgtaccag ctcCttctac ctataccgca gttgaagcac CD 1001 ctaaaggaga atttggtgtc tttctggtca gtaatggaag caatcgtccC CD 1051 taccgtCgta aaataagagc acccggcttt gcccattCac aaggactcga CD 1101 ttCtatgtcc aaacatcaca tgcCagcaga tgtggtcacc atCataggta CD 1151 ctcaagatat tgtgtCtgga gaggtggata gatag FT EDITED CDNA CD 1 atgacgacta agaacaggca aatcaaaaat ttcacttTga atttcggacc CD 51 tcaacatcct gctgctcatg gtgtttTacg atTagtattg gaaatgaaTg CD 101 gagaagtggt ggaacgtgcg gaaccacata ttggattact Tcatagaggg CD 151 actgagaaat taattgagta caaaacttat cttcaagctt taccttattt CD 201 TgatcgttTa gactatgttt ctatgatggc ccaagaacac gctTattctt CD 251 Tagccgtaga gagacttttg aattgcgagg taccattacg agctcaatat CD 301 atacgagtgt tattcTgtga aataactcga attttaaatc atttacttgc CD 351 tttaactact catgctatgg atgtaggagc atTaactccg ttcctgtggg CD 401 cttttgagga gcgggagaaa ttgttggaat tctatgaaag agtctcggga CD 451 gccaggatgc atgccagttt catacgacca ggtggagtgg cacaagatct CD 501 gcctcttggc ttatgtatag atattgattc attcacacaa caatttgctt CD 551 ctcgtatcga cgaattagaa gagatgtTaa ccggcaaccg tatctggaaa CD 601 caacgattag tggatattgg tactgtcact gcacagcaag caaaggattg CD 651 gggattcagt ggtgtaatgt taagaggttc tggggtatgc tgggatttgc CD 701 gaaaagcagc accttacgat gttTatgacc aattggatTT tgacatacca CD 751 gtaggtacca gaggagatTg ctatgatcgt tactgtattc gtatcgaaga CD 801 gatgcgacaa agtgttcgga tcattgtgca atgtcttaat caaatgccta CD 851 gtggcatgat caaagccgat gatcgtaagc tatgtcctcc atcacgatct CD 901 cgaatgaaac tatccatgga atcctTaatt caccatttcg aacTttatac CD 951 agaaggtttt tccgtaccag ctcTttctac ctataccgca gttgaagcac CD 1001 ctaaaggaga atttggtgtc tttctggtca gtaatggaag caatcgtccT CD 1051 taccgtTgta aaataagagc acccggcttt gcccattTac aaggactcga CD 1101 ttTtatgtcc aaacatcaca tgcTagcaga tgtggtcacc atTataggta CD 1151 ctcaagatat tgtgtTtgga gaggtggata gatag SQ SEQUENCE 395 AA; MTTKNRQIKN FTLNFGPQHP AAHGVLRLVL EMNGEVVERA EPHIGLLHRG TEKLIEYKTY LQALPYFDRL DYVSMMAQEH AYSLAVERLL NCEVPLRAQY IRVLFCEITR ILNHLLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCIDIDSFTQ QFASRIDELE EMLTGNRIWK QRLVDIGTVT AQQAKDWGFS GVMLRGSGVC WDLRKAAPYD VYDQLDFDIP VGTRGDCYDR YCIRIEEMRQ SVRIIVQCLN QMPSGMIKAD DRKLCPPSRS RMKLSMESLI HHFELYTEGF SVPALSTYTA VEAPKGEFGV FLVSNGSNRP YRCKIRAPGF AHLQGLDFMS KHHMLADVVT IIGTQDIVFG EVDR* // ID Y17812_1 STANDARD; PRT; 80 AA. AC Y17812; DT Thu Jul 9 18:14:07 2009 DE Isoetes lacustris mitochondrial nad1 gene. OS mitochondrion Isoetes lacustris OC Isoetes lacustris RN [1] RL RNA 4 (12), 1599-1609 (1998) RL PUBMED 9848656 FT N-terminal not determined FT C-terminal not determined FT GENE : nad1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA76866.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 73/1 FT EDITING : 16 P(CCt) -> F(TTt) FT EDITING : 17 P(cCt) -> L(cTt) FT EDITING : 18 P(CCt) -> F(TTt) FT EDITING : 19 P(CCa) -> L(TTa) FT EDITING : 20 T(aCg) -> M(aTg) FT EDITING : 22 L(cTa) -> P(cCa) FT EDITING : 26 S(tCt) -> F(tTt) FT EDITING : 28 S(tCa) -> L(tTa) FT EDITING : 33 R(Cgg) -> W(Tgg) FT EDITING : 37 S(Tct) -> P(Cct) FT EDITING : 38 L(Ctt) -> F(Ttt) FT EDITING : 43 A(gCa) -> V(gTa) FT EDITING : 45 P(Cca) -> S(Tca) FT EDITING : 53 H(Cat) -> Y(Tat) FT EDITING : 58 P(Cct) -> S(Tct) FT EDITING : 59 F(tTt) -> S(tCt) FT EDITING : 67 T(aCg) -> M(aTg) FT EDITING : 70 R(Cgg) -> W(Tgg) FT EDITING : 71 P(Cct) -> S(Tct) FT EDITING : 74 P(Ccc) -> S(Tcc) FT EDITING : 76 Y(taC) -> Y(taT) FT EDITING : 79 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 240 NT; CD 1 aaatcaattc taaaagaacc tattttaccg agtagtgcta atttcCCtcC CD 51 tCCtCCaaCg gctcTaataa ttacatCtat gtCaggtttg gttgctCggg CD 101 ccgtcataTc tCttgattat ggtatggCat taCcagattt caatgtaggt CD 151 acacttCatt tattcgccat tCcttTtcca ggtgtttatg gaattattaC CD 201 ggcgggtCgg CctagtaatC ccaaataCgc tttttCagga FT EDITED CDNA CD 1 aaatcaattc taaaagaacc tattttaccg agtagtgcta atttcTTtcT CD 51 tTTtTTaaTg gctcCaataa ttacatTtat gtTaggtttg gttgctTggg CD 101 ccgtcataCc tTttgattat ggtatggTat taTcagattt caatgtaggt CD 151 acacttTatt tattcgccat tTcttCtcca ggtgtttatg gaattattaT CD 201 ggcgggtTgg TctagtaatT ccaaataTgc tttttTagga SQ SEQUENCE 80 AA; KSILKEPILP SSANFFLFLM APIITFMLGL VAWAVIPFDY GMVLSDFNVG TLYLFAISSP GVYGIIMAGW SSNSKYAFLG // ID Y14435_1 STANDARD; PRT; 489 AA. AC Y14435; DT Thu Jul 9 18:14:07 2009 DE Triticum aestivum mitochondrial NADH dehydrogenase subunit 2. OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Mol. Gen. Genet. 258 (5), 503-511 (1998) RL PUBMED 9669332 FT Full length CDS FT GENE : nad2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA74779.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 2 FT EVIDENCE : FT EXCEPTION : FT REGIONS : 271 - 1737 FT DIRECTIONS : positive FT EDITING : 9 S(tCc) -> F(tTc) FT EDITING : 101 F(ttC) -> F(ttT) FT EDITING : 112 S(tCt) -> F(tTt) FT EDITING : 119 P(cCa) -> L(cTa) FT EDITING : 121 P(Cct) -> S(Tct) FT EDITING : 123 R(Cgc) -> C(Tgc) FT EDITING : 130 P(Ccg) -> S(Tcg) FT EDITING : 132 H(Cat) -> Y(Tat) FT EDITING : 166 S(tCa) -> L(tTa) FT EDITING : 175 P(Ccc) -> S(Tcc) FT EDITING : 207 I(atC) -> I(atT) FT EDITING : 228 F(ttC) -> F(ttT) FT EDITING : 263 S(tCt) -> F(tTt) FT EDITING : 267 S(tCa) -> L(tTa) FT EDITING : 270 S(tCt) -> F(tTt) FT EDITING : 307 P(cCt) -> L(cTt) FT EDITING : 310 H(Cat) -> Y(Tat) FT EDITING : 320 R(Cgt) -> C(Tgt) FT EDITING : 321 T(aCt) -> I(aTt) FT EDITING : 343 S(tCa) -> L(tTa) FT EDITING : 353 P(CCa) -> L(TTa) FT EDITING : 376 S(tCg) -> L(tTg) FT EDITING : 416 P(CCa) -> L(TTa) FT EDITING : 426 R(Cgt) -> C(Tgt) FT EDITING : 433 A(gCg) -> V(gTg) FT EDITING : 466 T(aCt) -> I(aTt) FT EDITING : 467 S(tCa) -> L(tTa) FT EDITING : 468 S(tCC) -> F(tTT) FT EDITING : 470 P(CCa) -> L(TTa) FT EDITING : 472 P(ccC) -> P(ccT) FT EDITING : 474 P(Ccc) -> S(Tcc) FT EDITING : 486 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1467 NT; CD 1 atgttcaatc tttttttagc ggtttCccca gagatcttta tcattaacgc CD 51 aaccttcatt ttgctcattc atggagttgt atttagtacc tctaagaaag CD 101 atgattatcc accgttagtt agtaatgtgg gttggcttgg attacttagt CD 151 gttctaataa ccttgcttct gctcgccgct ggcgcacctc tcctaactat CD 201 tgcccattta ttctggaata atttttttag gagggacaat tttacatatt CD 251 tctgccaaat ccttctatta ttaagtacgg ctggtaccat ttcgatgtgt CD 301 ttCgattttt tcgaaaaaga gaggtttgat gcttCtgaat tcattgtatt CD 351 aattcCactt CctactCgca gtatgctctt aatgatcCcg gctCatgatt CD 401 taattgccat gtatttagct attgagcttc aaagtttatg tttttatgtg CD 451 atcgcagcat caaaaagaaa gtctgaattt tccacggaag ccggctCaaa CD 501 atatttgatc ttaggtgcat ttCcctctgg aatattattg ttcggttgtt CD 551 ccatgatcta tgggtctact ggagctaccc acttcgatca attagccaag CD 601 attttgaccg gatacgaaat Cactggtgct cgatctagtg gtatttttat CD 651 ggggattctt tttatcgctg taggattcct attCaagatt actgcagttc CD 701 cttttcatat gtgggcacct gatatctatg agggttcacc caccccggtg CD 751 acagcattcc tttctattgc gcctaaaatc tctatttCtg caaatatgtC CD 801 acgtgtttCt attgttgctt cctatggggg tacattacaa caaatcttct CD 851 ttttctgcag cattgcttct atgatcttag gagcactggc cgccatggcc CD 901 caaacgaaag tcaaaagacC tctagctCat agttcgattg gacatgtagg CD 951 ttatattCgt aCtggtttct catgtggaac catagaagga attcaatcac CD 1001 tactaattgg tatatttatt tatgcatCaa tgacgataga tgcattcgcc CD 1051 atagttCCag cattacggca aacccgtgtc aaatatatag cggatttggg CD 1101 cgctctagcc aaaacgaatc ctatttCggc tatgaccttc tccattacaa CD 1151 tgttctcata cgcaggaata cccccgttag ccggcttttg tagcaaattc CD 1201 tatttgttct tcgccgcttt gggttgtggg gcttacttcc tagccCCagt CD 1251 gggagtagtg actagcgtta taggtCgttt ttattatata cgcttagCga CD 1301 aaagaatgtt ttttgataga cctaggacat ggattctata tgaaccaatg CD 1351 gatcgtgaca agtcgttact actagcaatg acttcctctt tcattaCttC CD 1401 atCCtttCCa tatccCtctC ccttgttcga tcttactcat caaatggcac CD 1451 tcagttCata tctgtaa FT EDITED CDNA CD 1 atgttcaatc tttttttagc ggtttTccca gagatcttta tcattaacgc CD 51 aaccttcatt ttgctcattc atggagttgt atttagtacc tctaagaaag CD 101 atgattatcc accgttagtt agtaatgtgg gttggcttgg attacttagt CD 151 gttctaataa ccttgcttct gctcgccgct ggcgcacctc tcctaactat CD 201 tgcccattta ttctggaata atttttttag gagggacaat tttacatatt CD 251 tctgccaaat ccttctatta ttaagtacgg ctggtaccat ttcgatgtgt CD 301 ttTgattttt tcgaaaaaga gaggtttgat gcttTtgaat tcattgtatt CD 351 aattcTactt TctactTgca gtatgctctt aatgatcTcg gctTatgatt CD 401 taattgccat gtatttagct attgagcttc aaagtttatg tttttatgtg CD 451 atcgcagcat caaaaagaaa gtctgaattt tccacggaag ccggctTaaa CD 501 atatttgatc ttaggtgcat ttTcctctgg aatattattg ttcggttgtt CD 551 ccatgatcta tgggtctact ggagctaccc acttcgatca attagccaag CD 601 attttgaccg gatacgaaat Tactggtgct cgatctagtg gtatttttat CD 651 ggggattctt tttatcgctg taggattcct attTaagatt actgcagttc CD 701 cttttcatat gtgggcacct gatatctatg agggttcacc caccccggtg CD 751 acagcattcc tttctattgc gcctaaaatc tctatttTtg caaatatgtT CD 801 acgtgtttTt attgttgctt cctatggggg tacattacaa caaatcttct CD 851 ttttctgcag cattgcttct atgatcttag gagcactggc cgccatggcc CD 901 caaacgaaag tcaaaagacT tctagctTat agttcgattg gacatgtagg CD 951 ttatattTgt aTtggtttct catgtggaac catagaagga attcaatcac CD 1001 tactaattgg tatatttatt tatgcatTaa tgacgataga tgcattcgcc CD 1051 atagttTTag cattacggca aacccgtgtc aaatatatag cggatttggg CD 1101 cgctctagcc aaaacgaatc ctatttTggc tatgaccttc tccattacaa CD 1151 tgttctcata cgcaggaata cccccgttag ccggcttttg tagcaaattc CD 1201 tatttgttct tcgccgcttt gggttgtggg gcttacttcc tagccTTagt CD 1251 gggagtagtg actagcgtta taggtTgttt ttattatata cgcttagTga CD 1301 aaagaatgtt ttttgataga cctaggacat ggattctata tgaaccaatg CD 1351 gatcgtgaca agtcgttact actagcaatg acttcctctt tcattaTttT CD 1401 atTTtttTTa tatccTtctT ccttgttcga tcttactcat caaatggcac CD 1451 tcagttTata tctgtaa SQ SEQUENCE 489 AA; MFNLFLAVFP EIFIINATFI LLIHGVVFST SKKDDYPPLV SNVGWLGLLS VLITLLLLAA GAPLLTIAHL FWNNFFRRDN FTYFCQILLL LSTAGTISMC FDFFEKERFD AFEFIVLILL STCSMLLMIS AYDLIAMYLA IELQSLCFYV IAASKRKSEF STEAGLKYLI LGAFSSGILL FGCSMIYGST GATHFDQLAK ILTGYEITGA RSSGIFMGIL FIAVGFLFKI TAVPFHMWAP DIYEGSPTPV TAFLSIAPKI SIFANMLRVF IVASYGGTLQ QIFFFCSIAS MILGALAAMA QTKVKRLLAY SSIGHVGYIC IGFSCGTIEG IQSLLIGIFI YALMTIDAFA IVLALRQTRV KYIADLGALA KTNPILAMTF SITMFSYAGI PPLAGFCSKF YLFFAALGCG AYFLALVGVV TSVIGCFYYI RLVKRMFFDR PRTWILYEPM DRDKSLLLAM TSSFIILFFL YPSSLFDLTH QMALSLYL* // ID X80170_1 STANDARD; PRT; 333 AA. AC X80170; DT Thu Jul 9 18:14:07 2009 DE O.berteriana rpl2 gene. OS Oenothera berteroana OC Oenothera berteroana RN [1] RL Unpublished FT Full length CDS FT GENE : rp12 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA56451.1 FT PROTEIN_NAME : 70s mitochondrial ribosomal protein L2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 294/2 FT EDITING : 72 P(cCa) -> L(cTa) FT EDITING : 86 T(aCg) -> M(aTg) FT EDITING : 99 P(Cct) -> S(Tct) FT EDITING : 295 T(aCt) -> I(aTt) FT EDITING : 315 S(tcC) -> S(tcT) FT CODON_START : 1 CL CDNALEN 999 NT; CD 1 atgagacaaa gcaaaggggt ccgagcactt agacaattca ctttttgtac CD 51 agggaagtct gctggtagga attcttcagg gcgtcttacg gtttttcacc CD 101 gagggggtgg gtcgaagcga ttgcagcgaa gaattgatct gaaacgaagc CD 151 acttcgtcta tgggcattgt agaaaggata gaatatgacc ctaatcgttc CD 201 ttctcggatc gctcCagtac gatggattga gggggtccgc ctgaggaaat CD 251 tgaacaCgat agaggagttc gctccgccgc ctaagatcct cgaaCctacc CD 301 acgaccacca tccgcggcct attttcgttc tcttccctgc ccggaaaggg CD 351 tgatcaaata aaggtagctt gcttctctcc tggacggatg gcggcttatg CD 401 tagtggtcgg cagaatgtcc ccttggtcga agagcccctt tacggggaag CD 451 ggcgcaggaa gcaaaaaaac ttgcgcgaag gacgttttct tttctgcctt CD 501 ctcctctcca aaggccaagg gagagactgc atccctttcc ttcgggagct CD 551 cttttggttt cccaaggata gcggtagctg gggcaaagcc cgctttcttc CD 601 gctccgcgaa tgagagagga cgaggataaa ctcagaggaa aaaacacgtt CD 651 ctctctttgc gaggtccgaa agtggagaac gcatagcatt ctctgggcac CD 701 ataggatcaa acgtaaagca gcgctttctt ggctgagttt taggcggcaa CD 751 gagactgacg ggcttgttgg agctgctgag cataacgaat cgaagccgaa CD 801 gacggatcaa ggtagcttgc ctgccaagcc gataggcgaa gggacgaagg CD 851 atggagcgtg caaagtagat cgtgcacctg tcaCttatat aatagccagt CD 901 catcaattgg aagcgggcaa gatggtgatg aattgcgatt ggtcCaaacc CD 951 ttcgaccagc gactttttgc gacctgccca gaatgcccat acatactaa FT EDITED CDNA CD 1 atgagacaaa gcaaaggggt ccgagcactt agacaattca ctttttgtac CD 51 agggaagtct gctggtagga attcttcagg gcgtcttacg gtttttcacc CD 101 gagggggtgg gtcgaagcga ttgcagcgaa gaattgatct gaaacgaagc CD 151 acttcgtcta tgggcattgt agaaaggata gaatatgacc ctaatcgttc CD 201 ttctcggatc gctcTagtac gatggattga gggggtccgc ctgaggaaat CD 251 tgaacaTgat agaggagttc gctccgccgc ctaagatcct cgaaTctacc CD 301 acgaccacca tccgcggcct attttcgttc tcttccctgc ccggaaaggg CD 351 tgatcaaata aaggtagctt gcttctctcc tggacggatg gcggcttatg CD 401 tagtggtcgg cagaatgtcc ccttggtcga agagcccctt tacggggaag CD 451 ggcgcaggaa gcaaaaaaac ttgcgcgaag gacgttttct tttctgcctt CD 501 ctcctctcca aaggccaagg gagagactgc atccctttcc ttcgggagct CD 551 cttttggttt cccaaggata gcggtagctg gggcaaagcc cgctttcttc CD 601 gctccgcgaa tgagagagga cgaggataaa ctcagaggaa aaaacacgtt CD 651 ctctctttgc gaggtccgaa agtggagaac gcatagcatt ctctgggcac CD 701 ataggatcaa acgtaaagca gcgctttctt ggctgagttt taggcggcaa CD 751 gagactgacg ggcttgttgg agctgctgag cataacgaat cgaagccgaa CD 801 gacggatcaa ggtagcttgc ctgccaagcc gataggcgaa gggacgaagg CD 851 atggagcgtg caaagtagat cgtgcacctg tcaTttatat aatagccagt CD 901 catcaattgg aagcgggcaa gatggtgatg aattgcgatt ggtcTaaacc CD 951 ttcgaccagc gactttttgc gacctgccca gaatgcccat acatactaa SQ SEQUENCE 333 AA; MRQSKGVRAL RQFTFCTGKS AGRNSSGRLT VFHRGGGSKR LQRRIDLKRS TSSMGIVERI EYDPNRSSRI ALVRWIEGVR LRKLNMIEEF APPPKILEST TTTIRGLFSF SSLPGKGDQI KVACFSPGRM AAYVVVGRMS PWSKSPFTGK GAGSKKTCAK DVFFSAFSSP KAKGETASLS FGSSFGFPRI AVAGAKPAFF APRMREDEDK LRGKNTFSLC EVRKWRTHSI LWAHRIKRKA ALSWLSFRRQ ETDGLVGAAE HNESKPKTDQ GSLPAKPIGE GTKDGACKVD RAPVIYIIAS HQLEAGKMVM NCDWSKPSTS DFLRPAQNAH TY* // ID X69720_1 STANDARD; PRT; 288 AA. AC X69720; DT Thu Jul 9 18:14:07 2009 DE T.aestivum mitochondrial nad9 gene for 30 kDa subunit of complex I OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Eur. J. Biochem. 217 (3), 831-838 (1993) RL PUBMED 8223639 FT Full length CDS FT GENE : nad9 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA49376.1 FT PROTEIN_NAME : 30 kDa subunit of complex I NADH dehydrogenase FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 22 - 885 FT DIRECTIONS : positive FT EDITING : 59 L(Ctg) -> L(Ttg) FT EDITING : 69 R(Cgg) -> W(Tgg) FT EDITING : 102 S(tCc) -> F(tTc) FT EDITING : 128 S(tCt) -> F(tTt) FT EDITING : 134 Y(taC) -> Y(taT) FT EDITING : 135 P(cCa) -> L(cTa) FT EDITING : 153 S(tCg) -> L(tTg) FT EDITING : 161 H(Cat) -> Y(Tat) FT EDITING : 172 H(Cat) -> Y(Tat) FT EDITING : 197 P(Ccg) -> S(Tcg) FT EDITING : 207 R(Cgg) -> W(Tgg) FT EDITING : 216 S(tCt) -> F(tTt) FT EDITING : 220 S(tCc) -> F(tTc) FT EDITING : 230 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 864 NT; CD 1 atgctctgta taatactttt ccccgagcga tggtttagcg gattcggaat CD 51 tgtaaccaag catcctgggt tctatacccg attcaacact agagcatgca CD 101 gccgatcctg gatacataac tctaaaaagt gtgtgtgcag ttttggatct CD 151 ttattggtag ccagtctttc acttCtgcct ctccactccc atgcctttct CD 201 tggtCggacc aacccaaccg gcgatttccg acaagtcttt ctgcttagag CD 251 caagaagcgg aaccaaaata aagctttctt tattttcatt tatggataac CD 301 caatCcattt tccaatatag ttgggagatt ttacccaaga aatgggtaca CD 351 taaaatgaaa agatcggaac atgggaatag atCttatacc aatactgact CD 401 aCcCatttcc attgttgtgc tttctaaaat ggcataccta tacaagggtt CD 451 caagtttCga tcgatatttg cggagtggat Catccctctc gaaaacgaag CD 501 atttgaagtt gtcCataatt tactgagtac tcggtataac tcacgcattc CD 551 gtgtacaaac aagtgcagac gaagtaacac gaatatctCc ggtagtcagt CD 601 ctatttccat cagccggcCg gtgggagcga gaagtatggg atatgtCtgg CD 651 tgtttcttCc atcaatcatc cggatttacg ccgtatatCa acagattatg CD 701 gtttcgaggg tcatccatta cgaaaagact ttcctctgag tggatatgtg CD 751 gaagtacgct atgatgatcc agagaaacgt gtggtttctg aacccattga CD 801 gatgacccaa gaatttcgct atttcgattt tgctagtcct tgggaacagc CD 851 gtagcgacgg ataa FT EDITED CDNA CD 1 atgctctgta taatactttt ccccgagcga tggtttagcg gattcggaat CD 51 tgtaaccaag catcctgggt tctatacccg attcaacact agagcatgca CD 101 gccgatcctg gatacataac tctaaaaagt gtgtgtgcag ttttggatct CD 151 ttattggtag ccagtctttc acttTtgcct ctccactccc atgcctttct CD 201 tggtTggacc aacccaaccg gcgatttccg acaagtcttt ctgcttagag CD 251 caagaagcgg aaccaaaata aagctttctt tattttcatt tatggataac CD 301 caatTcattt tccaatatag ttgggagatt ttacccaaga aatgggtaca CD 351 taaaatgaaa agatcggaac atgggaatag atTttatacc aatactgact CD 401 aTcTatttcc attgttgtgc tttctaaaat ggcataccta tacaagggtt CD 451 caagtttTga tcgatatttg cggagtggat Tatccctctc gaaaacgaag CD 501 atttgaagtt gtcTataatt tactgagtac tcggtataac tcacgcattc CD 551 gtgtacaaac aagtgcagac gaagtaacac gaatatctTc ggtagtcagt CD 601 ctatttccat cagccggcTg gtgggagcga gaagtatggg atatgtTtgg CD 651 tgtttcttTc atcaatcatc cggatttacg ccgtatatTa acagattatg CD 701 gtttcgaggg tcatccatta cgaaaagact ttcctctgag tggatatgtg CD 751 gaagtacgct atgatgatcc agagaaacgt gtggtttctg aacccattga CD 801 gatgacccaa gaatttcgct atttcgattt tgctagtcct tgggaacagc CD 851 gtagcgacgg ataa SQ SEQUENCE 288 AA; MLCIILFPER WFSGFGIVTK HPGFYTRFNT RACSRSWIHN SKKCVCSFGS LLVASLSLLP LHSHAFLGWT NPTGDFRQVF LLRARSGTKI KLSLFSFMDN QFIFQYSWEI LPKKWVHKMK RSEHGNRFYT NTDYLFPLLC FLKWHTYTRV QVLIDICGVD YPSRKRRFEV VYNLLSTRYN SRIRVQTSAD EVTRISSVVS LFPSAGWWER EVWDMFGVSF INHPDLRRIL TDYGFEGHPL RKDFPLSGYV EVRYDDPEKR VVSEPIEMTQ EFRYFDFASP WEQRSDG* // ID D14882_1 STANDARD; PRT; 444 AA. AC D14882; DT Thu Jul 9 18:14:07 2009 DE Osmunda cinnamomea var. fokiensis chloroplast rbcL gene for large OS chloroplast Osmunda cinnamomea var. fokiensis OC Osmunda cinnamomea var. fokiensis RN [1] RL J. Mol. Evol. 37 (5), 476-482 (1993) RL PUBMED 8283479 FT N-terminal not determined FT C-terminal not determined FT GENE : rbcL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA03601.1 FT PROTEIN_NAME : large subunit of ribulose-1,5-bisphosphate FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 1333 FT DIRECTIONS : positive FT EDITING : 15 H(Cac) -> Y(Tac) FT EDITING : 126 S(tCg) -> L(tTg) FT EDITING : 129 S(tCg) -> L(tTg) FT EDITING : 231 S(tCg) -> L(tTg) FT EDITING : 251 S(tCg) -> L(tTg) FT EDITING : 261 S(tCg) -> L(tTg) FT CODON_START : 2 CL CDNALEN 1333 NT; CD 1 aggtattgga ttcaaagctg gtgttaaaga ttatcgattg actCactata CD 51 ctcccgatta tgagaccaag gatactgata ttttggcagc attccgaatg CD 101 actccccaac ccggagtacc ggctgaggaa gctggagctg cagtagctgc CD 151 ggaatcttct acaggtacgt ggaccactgt atggacggat ggacttacca CD 201 gtcttgatcg ttataagggt cgatgctacg atattgaacc tgttgctggg CD 251 gaagaaaatc aatatattgc ttatgtagct tatcctctgg acctattcga CD 301 agaaggttct gttaccaata tgttcacttc cattgtaggt aacgtgttcg CD 351 gattcaaagc attacgcgct ctacgttCgg aagattCgag aattcctccc CD 401 gcgtattcta agactttcat cgggccgcct cacggtatcc aggtcgaaag CD 451 ggataaattg aacaaatatg gtcgtccttt gttgggatgt acgattaaac CD 501 ccaaattggg tttatctgct aagaattatg gtagagctgt ttatgaatgt CD 551 cttcgtggtg ggcttgattt taccaaagat gatgagaacg tgaattctca CD 601 accattcatg cgttggagag atcgtttctt gttcgtagca gaagctcttt CD 651 ttaaagctca agctgaaacc ggcgagatta agggacatta ctCgaatgct CD 701 actgcaggta catgtgaaga aatgatgaaa agagcagtat ttgctaggga CD 751 atCgggcgca cctattgtca tgcatgatta ttCgacggga ggctttactg CD 801 caaatactag cttggctttt tattgtcgag ataatggtct acttctccac CD 851 attcaccgtg caatgcatgc cgttatcgat aggcaaagga atcacggtat CD 901 acacttccgt gtattggcta aagcattgcg tatgtctggt ggagatcata CD 951 ttcattccgg tactgtagtg ggtaaacttg aaggggaacg agaagtaact CD 1001 ttgggttttg tcgatttact ccgtgatgac tatatcgaaa aagaccgaag CD 1051 tcgcggtatc tatttcactc aggattgggt atccatgccg ggtgtatttc CD 1101 ctgtagcttc cggaggtatc catgtttggc atatgcccgc tctaacggaa CD 1151 atttttgggg atgattctgt attacagttt ggtggaggga ccttgggaca CD 1201 cccttgggga aatgcacctg gtgctgtagc taaccgagtt gctttagagg CD 1251 cttgtgtaca ggctcgtaat gagggacgtg atcttgctcg tcaaggtaat CD 1301 gagattattc gcgaagctgc taaatggagt cct FT EDITED CDNA CD 1 aggtattgga ttcaaagctg gtgttaaaga ttatcgattg actTactata CD 51 ctcccgatta tgagaccaag gatactgata ttttggcagc attccgaatg CD 101 actccccaac ccggagtacc ggctgaggaa gctggagctg cagtagctgc CD 151 ggaatcttct acaggtacgt ggaccactgt atggacggat ggacttacca CD 201 gtcttgatcg ttataagggt cgatgctacg atattgaacc tgttgctggg CD 251 gaagaaaatc aatatattgc ttatgtagct tatcctctgg acctattcga CD 301 agaaggttct gttaccaata tgttcacttc cattgtaggt aacgtgttcg CD 351 gattcaaagc attacgcgct ctacgttTgg aagattTgag aattcctccc CD 401 gcgtattcta agactttcat cgggccgcct cacggtatcc aggtcgaaag CD 451 ggataaattg aacaaatatg gtcgtccttt gttgggatgt acgattaaac CD 501 ccaaattggg tttatctgct aagaattatg gtagagctgt ttatgaatgt CD 551 cttcgtggtg ggcttgattt taccaaagat gatgagaacg tgaattctca CD 601 accattcatg cgttggagag atcgtttctt gttcgtagca gaagctcttt CD 651 ttaaagctca agctgaaacc ggcgagatta agggacatta ctTgaatgct CD 701 actgcaggta catgtgaaga aatgatgaaa agagcagtat ttgctaggga CD 751 atTgggcgca cctattgtca tgcatgatta ttTgacggga ggctttactg CD 801 caaatactag cttggctttt tattgtcgag ataatggtct acttctccac CD 851 attcaccgtg caatgcatgc cgttatcgat aggcaaagga atcacggtat CD 901 acacttccgt gtattggcta aagcattgcg tatgtctggt ggagatcata CD 951 ttcattccgg tactgtagtg ggtaaacttg aaggggaacg agaagtaact CD 1001 ttgggttttg tcgatttact ccgtgatgac tatatcgaaa aagaccgaag CD 1051 tcgcggtatc tatttcactc aggattgggt atccatgccg ggtgtatttc CD 1101 ctgtagcttc cggaggtatc catgtttggc atatgcccgc tctaacggaa CD 1151 atttttgggg atgattctgt attacagttt ggtggaggga ccttgggaca CD 1201 cccttgggga aatgcacctg gtgctgtagc taaccgagtt gctttagagg CD 1251 cttgtgtaca ggctcgtaat gagggacgtg atcttgctcg tcaaggtaat CD 1301 gagattattc gcgaagctgc taaatggagt cct SQ SEQUENCE 444 AA; GIGFKAGVKD YRLTYYTPDY ETKDTDILAA FRMTPQPGVP AEEAGAAVAA ESSTGTWTTV WTDGLTSLDR YKGRCYDIEP VAGEENQYIA YVAYPLDLFE EGSVTNMFTS IVGNVFGFKA LRALRLEDLR IPPAYSKTFI GPPHGIQVER DKLNKYGRPL LGCTIKPKLG LSAKNYGRAV YECLRGGLDF TKDDENVNSQ PFMRWRDRFL FVAEALFKAQ AETGEIKGHY LNATAGTCEE MMKRAVFARE LGAPIVMHDY LTGGFTANTS LAFYCRDNGL LLHIHRAMHA VIDRQRNHGI HFRVLAKALR MSGGDHIHSG TVVGKLEGER EVTLGFVDLL RDDYIEKDRS RGIYFTQDWV SMPGVFPVAS GGIHVWHMPA LTEIFGDDSV LQFGGGTLGH PWGNAPGAVA NRVALEACVQ ARNEGRDLAR QGNEIIREAA KWSP // ID LCUCPRBCL_1 STANDARD; PRT; 476 AA. AC L11055; DT Thu Jul 9 18:14:07 2009 DE Lycopodium digitatum chloroplast ribulosebisphosphate carboxylase OS chloroplast Lycopodium digitatum OC Lycopodium digitatum RN [1] RL Mol. Phylogenet. Evol. 3 (2), 114-127 (1994) RL PUBMED 8075831 FT Full length CDS FT GENE : rbcL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAA57241.1 FT PROTEIN_NAME : ribulosebisphosphate carboxylase FT EVIDENCE : FT EXCEPTION : FT REGIONS : 187 - 1614 FT DIRECTIONS : positive FT EDITING : 24 H(Cat) -> Y(Tat) FT EDITING : 289 P(cCa) -> L(cTa) FT EDITING : 375 S(tCg) -> L(tTg) FT EDITING : 400 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1428 NT; CD 1 atgtcaccac aaacggagac taaaacaagt gttggattca aagctggcgt CD 51 tagggattac agattaactC attacactcc tgattataag accaaagaaa CD 101 ccgatattct ggcagcattt cgaatgactc ctcaacttgg agtaccaccc CD 151 gaggaagcgg gagccgcagt agctgctgaa tcttccactg gtacatggac CD 201 tactgtttgg accgatggac ttaccagtct cgatcgctac aaaggtcggt CD 251 gctatgaaat tgaacctgtt gctggagaaa aaaatcaata tattgcttat CD 301 gtagcttatc ctctggatct gtttgaggaa ggttccgtta ctaacttgtt CD 351 cacttccatt gtaggtaatg tatttggatt caaagcctta cgagctttac CD 401 gtttagaaga tttgcgaatt cctcctgctt attccaaaac tttcatgggt CD 451 ccgccccatg gtatccaagt cgaaagagac aaattgaaca aatatggccg CD 501 tcctttatta ggatgtacta ttaaaccaaa attaggttta tccgctaaaa CD 551 actatggtag agctgtttat gaatgtcttc gtggtggact tgatttcact CD 601 aaggatgatg aaaacgtgaa ttctcaaccg tttatgcgtt ggagagaccg CD 651 tttcttattc gtagcagaag ctctttataa agctcaagcc gaaacaggcg CD 701 aaattaaggg tcattacttg aatgctaccg cgggtacata tgaagaaatg CD 751 cttaaaaggg cacattgtgc taaagaatta ggagtgccta tcgtaatgca CD 801 tgactatttg acgggaggtt tcaccgcaaa tactagttta gcccattatt CD 851 gtcgagacaa tggtcCactg cttcacattc accgcgcgat gcatgcagtt CD 901 attgacagac aaaagaatca tggtattcac ttccgtgtat tagctaaagc CD 951 attacgtatg tctggtggag atcacataca ctccggtact gtagtaggta CD 1001 aactcgaagg agaacgccaa ataactttag gttttgttga tctacttcgt CD 1051 gatgactata tcgagaagga ccgaagccgt ggtatttatt tcactcaaga CD 1101 ttgggtatct atgcctggtg tttCgcccgt agcttcggga ggtattcatg CD 1151 tctggcacat gcctgctctg actgaaatct ttggagatga ttctgtatCa CD 1201 caattcggtg ggggaacttt gggacaccct tgggggaatg cacccggtgc CD 1251 agtagcaaac cgagttgctt tagaagcttg tgtacaggct cgtaatgaag CD 1301 gacgcgatct tgctcgtgag ggtaatgaga ttattcgtga agcttgtaag CD 1351 tggagtgctg aattagctgc cgcttgtgaa gtctggaaag aaatcaagtt CD 1401 tgaatttgaa gcagttgaca ctttgtaa FT EDITED CDNA CD 1 atgtcaccac aaacggagac taaaacaagt gttggattca aagctggcgt CD 51 tagggattac agattaactT attacactcc tgattataag accaaagaaa CD 101 ccgatattct ggcagcattt cgaatgactc ctcaacttgg agtaccaccc CD 151 gaggaagcgg gagccgcagt agctgctgaa tcttccactg gtacatggac CD 201 tactgtttgg accgatggac ttaccagtct cgatcgctac aaaggtcggt CD 251 gctatgaaat tgaacctgtt gctggagaaa aaaatcaata tattgcttat CD 301 gtagcttatc ctctggatct gtttgaggaa ggttccgtta ctaacttgtt CD 351 cacttccatt gtaggtaatg tatttggatt caaagcctta cgagctttac CD 401 gtttagaaga tttgcgaatt cctcctgctt attccaaaac tttcatgggt CD 451 ccgccccatg gtatccaagt cgaaagagac aaattgaaca aatatggccg CD 501 tcctttatta ggatgtacta ttaaaccaaa attaggttta tccgctaaaa CD 551 actatggtag agctgtttat gaatgtcttc gtggtggact tgatttcact CD 601 aaggatgatg aaaacgtgaa ttctcaaccg tttatgcgtt ggagagaccg CD 651 tttcttattc gtagcagaag ctctttataa agctcaagcc gaaacaggcg CD 701 aaattaaggg tcattacttg aatgctaccg cgggtacata tgaagaaatg CD 751 cttaaaaggg cacattgtgc taaagaatta ggagtgccta tcgtaatgca CD 801 tgactatttg acgggaggtt tcaccgcaaa tactagttta gcccattatt CD 851 gtcgagacaa tggtcTactg cttcacattc accgcgcgat gcatgcagtt CD 901 attgacagac aaaagaatca tggtattcac ttccgtgtat tagctaaagc CD 951 attacgtatg tctggtggag atcacataca ctccggtact gtagtaggta CD 1001 aactcgaagg agaacgccaa ataactttag gttttgttga tctacttcgt CD 1051 gatgactata tcgagaagga ccgaagccgt ggtatttatt tcactcaaga CD 1101 ttgggtatct atgcctggtg tttTgcccgt agcttcggga ggtattcatg CD 1151 tctggcacat gcctgctctg actgaaatct ttggagatga ttctgtatTa CD 1201 caattcggtg ggggaacttt gggacaccct tgggggaatg cacccggtgc CD 1251 agtagcaaac cgagttgctt tagaagcttg tgtacaggct cgtaatgaag CD 1301 gacgcgatct tgctcgtgag ggtaatgaga ttattcgtga agcttgtaag CD 1351 tggagtgctg aattagctgc cgcttgtgaa gtctggaaag aaatcaagtt CD 1401 tgaatttgaa gcagttgaca ctttgtaa SQ SEQUENCE 476 AA; MSPQTETKTS VGFKAGVRDY RLTYYTPDYK TKETDILAAF RMTPQLGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYEIEPV AGEKNQYIAY VAYPLDLFEE GSVTNLFTSI VGNVFGFKAL RALRLEDLRI PPAYSKTFMG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT KDDENVNSQP FMRWRDRFLF VAEALYKAQA ETGEIKGHYL NATAGTYEEM LKRAHCAKEL GVPIVMHDYL TGGFTANTSL AHYCRDNGLL LHIHRAMHAV IDRQKNHGIH FRVLAKALRM SGGDHIHSGT VVGKLEGERQ ITLGFVDLLR DDYIEKDRSR GIYFTQDWVS MPGVLPVASG GIHVWHMPAL TEIFGDDSVL QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLARE GNEIIREACK WSAELAAACE VWKEIKFEFE AVDTL* // ID APNCPRBCLB_1 STANDARD; PRT; 476 AA. AC D43696; DT Thu Jul 9 18:14:07 2009 DE Anthoceros formosae chloroplast mRNA for rbcL, complete cds. OS chloroplast Anthoceros formosae OC Anthoceros formosae RN [1] RL Nucleic Acids Res. 24 (6), 1008-1014 (1996) RL PUBMED 8604330 FT Full length CDS FT GENE : FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : BAA07798.1 FT PROTEIN_NAME : rbcL FT EVIDENCE : FT EXCEPTION : FT REGIONS : 27 - 1454 FT DIRECTIONS : positive FT EDITING : 24 H(Cat) -> Y(Tat) FT EDITING : 40 S(tCt) -> F(tTt) FT EDITING : 41 *(Tga) -> R(Cga) FT EDITING : 45 *(Taa) -> Q(Caa) FT EDITING : 101 A(gCt) -> V(gTt) FT EDITING : 104 S(Tct) -> P(Cct) FT EDITING : 133 S(tCa) -> L(tTa) FT EDITING : 138 S(tCa) -> L(tTa) FT EDITING : 162 S(tCg) -> L(tTg) FT EDITING : 226 S(tCt) -> F(tTt) FT EDITING : 275 I(aTt) -> T(aCt) FT EDITING : 301 T(aCC) -> I(aTT) FT EDITING : 314 S(tCa) -> L(tTa) FT EDITING : 318 S(tCa) -> L(tTa) FT EDITING : 328 P(Cca) -> S(Tca) FT EDITING : 339 C(Tgt) -> R(Cgt) FT EDITING : 349 P(cCt) -> L(cTt) FT EDITING : 350 C(Tgt) -> R(Cgt) FT EDITING : 376 L(cTc) -> P(cCc) FT CODON_START : 1 CL CDNALEN 1428 NT; CD 1 atgtcaccac aaacggagac taaagcaggt gttggattta aagctggtgt CD 51 taaagattat agattaaccC attatacccc tgattacgag accaaggata CD 101 ctgatatttt ggcagcgtCt Tgaatgactc ctTaaccagg ggtgccacct CD 151 gaagaagcag gagccgcagt agctgctgaa tcttcaactg gtacatggac CD 201 tactgtttgg accgatggac ttaccagcct tgaccgttac aaaggtcgat CD 251 gctatgacat tgaacctgtt gctggagagg aaaatcaata tattgcttat CD 301 gCtgcttatT ctttagattt gtttgaggag ggttctgtta ccaacatgtt CD 351 cacttccatt gtaggtaatg tttttggatt taaagcttta cgagcttCac CD 401 gtctagaaga ttCacgaatt ccacctgctt attccaaaac ctttcaaggt CD 451 ccacctcatg gtattcaagt tgaaagagat aaatCgaata aatatggtcg CD 501 tcctttatta ggatgtacca ttaaaccaaa gttaggttta tctgccaaaa CD 551 actatggtag agctgtatat gaatgtcttc gtggtggact tgatttcacc CD 601 aaagatgacg aaaatgttaa ttctcaacct tttatgcgtt ggagagatcg CD 651 ttttctattc gtagcagaag ctatttCtaa atctcaagct gaaacagggg CD 701 agattaaagg gcattactta aatgccactg caggtacatg tgaggaaatg CD 751 atgaaaaggg cacattttgc tagagaatta ggaatgccta tcgtaatgca CD 801 tgattatttg acaggaggtt ttaTtgcaaa tacgaccctg gctcgttatt CD 851 gtagagacaa tggtttactt cttcatattc atcgtgccat gcatgcagtt CD 901 aCCgacagac aaagaaatca tggtattcac tttcgtgtat Cagctaaagc CD 951 atCacgtatg tccgggggag atcatattca tCcaggtaca gtagtaggta CD 1001 aattagaggg agaaTgtgaa gtaactttag gttttgtgga tttacCtTgt CD 1051 gacgattata ttgaaaaaga tagaagtcgt gggatatatt ttactcaaga CD 1101 ctgggtctct atgcctggtg ttttgcTcgt ggcttcaggt ggtattcatg CD 1151 tttggcatat gccagcttta actgagattt tcggagatga ttccgtacta CD 1201 cagtttggcg ggggaactct aggacaccct tggggaaatg cacctggtgc CD 1251 agtagctaat cgagttgctt tagaagcttg tgtgcaagct cgtaatgaag CD 1301 gacgtgatct tgctcgcgag ggtaatgata ttatccgtga agctagtaaa CD 1351 tggagtcctg aattagcagc tgcttgtgaa gtatggaaag aaattaaatt CD 1401 cgtttttgag acgattgata ctctataa FT EDITED CDNA CD 1 atgtcaccac aaacggagac taaagcaggt gttggattta aagctggtgt CD 51 taaagattat agattaaccT attatacccc tgattacgag accaaggata CD 101 ctgatatttt ggcagcgtTt Cgaatgactc ctCaaccagg ggtgccacct CD 151 gaagaagcag gagccgcagt agctgctgaa tcttcaactg gtacatggac CD 201 tactgtttgg accgatggac ttaccagcct tgaccgttac aaaggtcgat CD 251 gctatgacat tgaacctgtt gctggagagg aaaatcaata tattgcttat CD 301 gTtgcttatC ctttagattt gtttgaggag ggttctgtta ccaacatgtt CD 351 cacttccatt gtaggtaatg tttttggatt taaagcttta cgagcttTac CD 401 gtctagaaga ttTacgaatt ccacctgctt attccaaaac ctttcaaggt CD 451 ccacctcatg gtattcaagt tgaaagagat aaatTgaata aatatggtcg CD 501 tcctttatta ggatgtacca ttaaaccaaa gttaggttta tctgccaaaa CD 551 actatggtag agctgtatat gaatgtcttc gtggtggact tgatttcacc CD 601 aaagatgacg aaaatgttaa ttctcaacct tttatgcgtt ggagagatcg CD 651 ttttctattc gtagcagaag ctatttTtaa atctcaagct gaaacagggg CD 701 agattaaagg gcattactta aatgccactg caggtacatg tgaggaaatg CD 751 atgaaaaggg cacattttgc tagagaatta ggaatgccta tcgtaatgca CD 801 tgattatttg acaggaggtt ttaCtgcaaa tacgaccctg gctcgttatt CD 851 gtagagacaa tggtttactt cttcatattc atcgtgccat gcatgcagtt CD 901 aTTgacagac aaagaaatca tggtattcac tttcgtgtat Tagctaaagc CD 951 atTacgtatg tccgggggag atcatattca tTcaggtaca gtagtaggta CD 1001 aattagaggg agaaCgtgaa gtaactttag gttttgtgga tttacTtCgt CD 1051 gacgattata ttgaaaaaga tagaagtcgt gggatatatt ttactcaaga CD 1101 ctgggtctct atgcctggtg ttttgcCcgt ggcttcaggt ggtattcatg CD 1151 tttggcatat gccagcttta actgagattt tcggagatga ttccgtacta CD 1201 cagtttggcg ggggaactct aggacaccct tggggaaatg cacctggtgc CD 1251 agtagctaat cgagttgctt tagaagcttg tgtgcaagct cgtaatgaag CD 1301 gacgtgatct tgctcgcgag ggtaatgata ttatccgtga agctagtaaa CD 1351 tggagtcctg aattagcagc tgcttgtgaa gtatggaaag aaattaaatt CD 1401 cgtttttgag acgattgata ctctataa SQ SEQUENCE 476 AA; MSPQTETKAG VGFKAGVKDY RLTYYTPDYE TKDTDILAAF RMTPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYDIEPV AGEENQYIAY VAYPLDLFEE GSVTNMFTSI VGNVFGFKAL RALRLEDLRI PPAYSKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT KDDENVNSQP FMRWRDRFLF VAEAIFKSQA ETGEIKGHYL NATAGTCEEM MKRAHFAREL GMPIVMHDYL TGGFTANTTL ARYCRDNGLL LHIHRAMHAV IDRQRNHGIH FRVLAKALRM SGGDHIHSGT VVGKLEGERE VTLGFVDLLR DDYIEKDRSR GIYFTQDWVS MPGVLPVASG GIHVWHMPAL TEIFGDDSVL QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLARE GNDIIREASK WSPELAAACE VWKEIKFVFE TIDTL* // ID SGPCPRBCL_1 STANDARD; PRT; 467 AA. AC L13485; DT Thu Jul 9 18:14:07 2009 DE Sphagnum palustre chloroplast ribulosebisphosphate carboxylase OS chloroplast Sphagnum palustre OC Sphagnum palustre RN [1] RL Mol. Phylogenet. Evol. 3 (2), 114-127 (1994) RL PUBMED 8075831 FT N-terminal not determined FT GENE : rbcL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAA53414.1 FT PROTEIN_NAME : ribulosebisphosphate carboxylase FT EVIDENCE : FT EXCEPTION : FT REGIONS : 1 - 1402 FT DIRECTIONS : positive FT EDITING : 96 S(tCa) -> L(tTa) FT CODON_START : 2 CL CDNALEN 1402 NT; CD 1 aggtagtgga tttaaagctg gtgttaaaga ttacaggttg acttattaca CD 51 ccccggagta tgctgtcaaa gataccgaca ttttggcagc atttcgaatg CD 101 actcctcaac ctggagtacc acccgaggaa gcaggagctg cagtagctgc CD 151 ggaatcttcc accggtacat ggactaccgt ttggaccgat ggacttacca CD 201 gtcttgatcg ttataagggt cgatgctacg atatcgagcc tgtagctgga CD 251 gaagaaaatc aatatattgc ttatgttgct tatccttCag atttattcga CD 301 agaaggttct gttaccaact tatttacttc tattgtaggt aatgtttttg CD 351 gattcaaagc tctacgagct ctacgtctag aggatttacg gattccccca CD 401 tcttatacta aaactttcca aggtccacct catggtatcc aagttgagag CD 451 agataaatta aacaaatatg gtcgtcccct attgggatgt actattaaac CD 501 caaaattagg tctatctgct aaaaactatg gcagagcagt atatgagtgt CD 551 cttcgtggtg gacttgattt tacgaaagat gatgaaaacg tcaattctca CD 601 acctttcatg cgttggagag atcgcttcct atttgtggca gaagctattt CD 651 ataaatccca ggctgaaacg ggtgaaatca agggtcatta cttgaatgct CD 701 actgcaggta catgcgaaga aatgatgaag agagcggcat ttgctagaga CD 751 gttaggagca cctatcatca tgcatgacta tttgacaggt ggtttcactg CD 801 caaatactac tttggctcat tattgccgag ataatggtct acttcttcat CD 851 attcatcgcg caatgcatgc agttattgac cgacaaaaaa ttcatggtat CD 901 gcacttccgt gtattagcta aagcattacg tttatctggt ggggatcata CD 951 tccacgccgg tactgtagtg ggtaaacttg aaggggaacg tcaagtaact CD 1001 ctgggatttg ttgatctact tcgtgatgac tatatcgaaa aagaccgaag CD 1051 ccgtggtatt tatttcaccc aagactgggt ttctttacca ggtgttttac CD 1101 ctgtagcttc gggaggtatt catgtttggc atatgcctgc tctaactgaa CD 1151 atttttgggg atgattccgt attacagttt ggtggaggaa ctctgggaca CD 1201 tccttggggg aacgcacctg gtgcagttgc taatcgagtt gctctggaag CD 1251 cctgtgtaca agcccgtaat gagggacgtg atcttgctcg tcaaggtaat CD 1301 gatattattc gcgaagctgc caagtggagt cccgaactag ccgctgcttg CD 1351 tgaagtatgg aaagaaatca aatttgagtt tgacacgatc gatactgttt CD 1401 ga FT EDITED CDNA CD 1 aggtagtgga tttaaagctg gtgttaaaga ttacaggttg acttattaca CD 51 ccccggagta tgctgtcaaa gataccgaca ttttggcagc atttcgaatg CD 101 actcctcaac ctggagtacc acccgaggaa gcaggagctg cagtagctgc CD 151 ggaatcttcc accggtacat ggactaccgt ttggaccgat ggacttacca CD 201 gtcttgatcg ttataagggt cgatgctacg atatcgagcc tgtagctgga CD 251 gaagaaaatc aatatattgc ttatgttgct tatccttTag atttattcga CD 301 agaaggttct gttaccaact tatttacttc tattgtaggt aatgtttttg CD 351 gattcaaagc tctacgagct ctacgtctag aggatttacg gattccccca CD 401 tcttatacta aaactttcca aggtccacct catggtatcc aagttgagag CD 451 agataaatta aacaaatatg gtcgtcccct attgggatgt actattaaac CD 501 caaaattagg tctatctgct aaaaactatg gcagagcagt atatgagtgt CD 551 cttcgtggtg gacttgattt tacgaaagat gatgaaaacg tcaattctca CD 601 acctttcatg cgttggagag atcgcttcct atttgtggca gaagctattt CD 651 ataaatccca ggctgaaacg ggtgaaatca agggtcatta cttgaatgct CD 701 actgcaggta catgcgaaga aatgatgaag agagcggcat ttgctagaga CD 751 gttaggagca cctatcatca tgcatgacta tttgacaggt ggtttcactg CD 801 caaatactac tttggctcat tattgccgag ataatggtct acttcttcat CD 851 attcatcgcg caatgcatgc agttattgac cgacaaaaaa ttcatggtat CD 901 gcacttccgt gtattagcta aagcattacg tttatctggt ggggatcata CD 951 tccacgccgg tactgtagtg ggtaaacttg aaggggaacg tcaagtaact CD 1001 ctgggatttg ttgatctact tcgtgatgac tatatcgaaa aagaccgaag CD 1051 ccgtggtatt tatttcaccc aagactgggt ttctttacca ggtgttttac CD 1101 ctgtagcttc gggaggtatt catgtttggc atatgcctgc tctaactgaa CD 1151 atttttgggg atgattccgt attacagttt ggtggaggaa ctctgggaca CD 1201 tccttggggg aacgcacctg gtgcagttgc taatcgagtt gctctggaag CD 1251 cctgtgtaca agcccgtaat gagggacgtg atcttgctcg tcaaggtaat CD 1301 gatattattc gcgaagctgc caagtggagt cccgaactag ccgctgcttg CD 1351 tgaagtatgg aaagaaatca aatttgagtt tgacacgatc gatactgttt CD 1401 ga SQ SEQUENCE 467 AA; GSGFKAGVKD YRLTYYTPEY AVKDTDILAA FRMTPQPGVP PEEAGAAVAA ESSTGTWTTV WTDGLTSLDR YKGRCYDIEP VAGEENQYIA YVAYPLDLFE EGSVTNLFTS IVGNVFGFKA LRALRLEDLR IPPSYTKTFQ GPPHGIQVER DKLNKYGRPL LGCTIKPKLG LSAKNYGRAV YECLRGGLDF TKDDENVNSQ PFMRWRDRFL FVAEAIYKSQ AETGEIKGHY LNATAGTCEE MMKRAAFARE LGAPIIMHDY LTGGFTANTT LAHYCRDNGL LLHIHRAMHA VIDRQKIHGM HFRVLAKALR LSGGDHIHAG TVVGKLEGER QVTLGFVDLL RDDYIEKDRS RGIYFTQDWV SLPGVLPVAS GGIHVWHMPA LTEIFGDDSV LQFGGGTLGH PWGNAPGAVA NRVALEACVQ ARNEGRDLAR QGNDIIREAA KWSPELAAAC EVWKEIKFEF DTIDTV* // ID BZZCPRBCL_1 STANDARD; PRT; 476 AA. AC L11056; DT Thu Jul 9 18:14:07 2009 DE Bazzania trilobata chloroplast ribulosebisphosphate carboxylase OS chloroplast Bazzania trilobata OC Bazzania trilobata RN [1] RL Mol. Phylogenet. Evol. 3 (2), 114-127 (1994) RL PUBMED 8075831 FT Full length CDS FT GENE : rbcL FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : AAA57238.1 FT PROTEIN_NAME : ribulosebisphosphate carboxylase FT EVIDENCE : FT EXCEPTION : FT REGIONS : 134 - 1561 FT DIRECTIONS : positive FT EDITING : 103 H(Cat) -> Y(Tat) FT EDITING : 130 S(tCa) -> L(tTa) FT EDITING : 283 H(Cat) -> Y(Tat) FT EDITING : 314 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1428 NT; CD 1 atgtcaccac aaacggagac taaaacaggt gttggattca aagctggtgt CD 51 taaagattat agattaacct attatacgcc tgaatatgag accaaagaga CD 101 cagatatttt ggcagcattt cgtatgactc cccaaccggg agtaccacct CD 151 gaagaagcag gagcggcagt agctgctgaa tcttcaaccg gtacgtggac CD 201 cacggtttgg accgatgggc ttacaagtct cgatcgttac aaaggtcgat CD 251 gctatgacat cgaacctgtt gccggtgaag aaaatcaata tattgcttat CD 301 gtagctCatc ccttagatct attcgaagaa ggttctgtta cgaatctttt CD 351 cacttctatt gtaggtaatg tgttcggatt caaagcttCa agagctttac CD 401 gtcttgaaga tttacgtatt cctccgtctt atgtaaaaac ttttcaaggt CD 451 ccacctcatg gtatccaagt tgaaagagat aaattaaata aatatggtcg CD 501 tcccttattg ggttgtacga ttaaaccaaa attgggttta tctgctaaaa CD 551 attatggtag agcggtatac gaatgtctcc gtggtgggct tgattttacg CD 601 aaagatgatg aaaatgtgaa ttcccaacca tttatgcgtt ggagagatcg CD 651 tttcttgttc gtagcagaag ctcttttcaa atctcaagct gaaactggtg CD 701 aaattaaagg acattattta aacgctactg caggtacttc cgaagaaatg CD 751 atgaaacgag ctgcctgtgc tagagaattg ggtgtaccaa ttgttatgca CD 801 tgattatctt acaggcggat tcactgcaaa tactagttta gctcatCatt CD 851 gtcgagataa cggtctactt cttcacatcc atcgtgcgat gcatgccgtt CD 901 attgatagac aaaaaaatca tggtatgcat ttccgtgtat Cagccaaagc CD 951 attacgttta tccggtggag atcatattca tgccggtact gttgtgggta CD 1001 aactagaggg agaacgtgac gtaactctgg gctttgtgga tttattacgt CD 1051 gatgattata tcgaaaaaga tagaagtcgt ggtgtttact tcacacaaga CD 1101 ttgggtctcc ctacctggtg tactccctgt agcatctggt ggtattcatg CD 1151 tttggcatat gccagcccta accgaaattt tcggggatga ttctgtatta CD 1201 cagttcggtg gtggaacttt gggacaccct tggggaaatg cacctggtgc CD 1251 agtggctaac cgagtcgctt cagaagcttg tgtacaagca cgtaatgaag CD 1301 gacgcgatct tgcccgtgaa ggtaatgaga ttattcgtga ggccgctaaa CD 1351 tggagccctg atttggctgc tgcttgtgaa gtttggaaag aaattaaatt CD 1401 tgaatatgaa acaatgaata ctttataa FT EDITED CDNA CD 1 atgtcaccac aaacggagac taaaacaggt gttggattca aagctggtgt CD 51 taaagattat agattaacct attatacgcc tgaatatgag accaaagaga CD 101 cagatatttt ggcagcattt cgtatgactc cccaaccggg agtaccacct CD 151 gaagaagcag gagcggcagt agctgctgaa tcttcaaccg gtacgtggac CD 201 cacggtttgg accgatgggc ttacaagtct cgatcgttac aaaggtcgat CD 251 gctatgacat cgaacctgtt gccggtgaag aaaatcaata tattgcttat CD 301 gtagctTatc ccttagatct attcgaagaa ggttctgtta cgaatctttt CD 351 cacttctatt gtaggtaatg tgttcggatt caaagcttTa agagctttac CD 401 gtcttgaaga tttacgtatt cctccgtctt atgtaaaaac ttttcaaggt CD 451 ccacctcatg gtatccaagt tgaaagagat aaattaaata aatatggtcg CD 501 tcccttattg ggttgtacga ttaaaccaaa attgggttta tctgctaaaa CD 551 attatggtag agcggtatac gaatgtctcc gtggtgggct tgattttacg CD 601 aaagatgatg aaaatgtgaa ttcccaacca tttatgcgtt ggagagatcg CD 651 tttcttgttc gtagcagaag ctcttttcaa atctcaagct gaaactggtg CD 701 aaattaaagg acattattta aacgctactg caggtacttc cgaagaaatg CD 751 atgaaacgag ctgcctgtgc tagagaattg ggtgtaccaa ttgttatgca CD 801 tgattatctt acaggcggat tcactgcaaa tactagttta gctcatTatt CD 851 gtcgagataa cggtctactt cttcacatcc atcgtgcgat gcatgccgtt CD 901 attgatagac aaaaaaatca tggtatgcat ttccgtgtat Tagccaaagc CD 951 attacgttta tccggtggag atcatattca tgccggtact gttgtgggta CD 1001 aactagaggg agaacgtgac gtaactctgg gctttgtgga tttattacgt CD 1051 gatgattata tcgaaaaaga tagaagtcgt ggtgtttact tcacacaaga CD 1101 ttgggtctcc ctacctggtg tactccctgt agcatctggt ggtattcatg CD 1151 tttggcatat gccagcccta accgaaattt tcggggatga ttctgtatta CD 1201 cagttcggtg gtggaacttt gggacaccct tggggaaatg cacctggtgc CD 1251 agtggctaac cgagtcgctt cagaagcttg tgtacaagca cgtaatgaag CD 1301 gacgcgatct tgcccgtgaa ggtaatgaga ttattcgtga ggccgctaaa CD 1351 tggagccctg atttggctgc tgcttgtgaa gtttggaaag aaattaaatt CD 1401 tgaatatgaa acaatgaata ctttataa SQ SEQUENCE 476 AA; MSPQTETKTG VGFKAGVKDY RLTYYTPEYE TKETDILAAF RMTPQPGVPP EEAGAAVAAE SSTGTWTTVW TDGLTSLDRY KGRCYDIEPV AGEENQYIAY VAYPLDLFEE GSVTNLFTSI VGNVFGFKAL RALRLEDLRI PPSYVKTFQG PPHGIQVERD KLNKYGRPLL GCTIKPKLGL SAKNYGRAVY ECLRGGLDFT KDDENVNSQP FMRWRDRFLF VAEALFKSQA ETGEIKGHYL NATAGTSEEM MKRAACAREL GVPIVMHDYL TGGFTANTSL AHYCRDNGLL LHIHRAMHAV IDRQKNHGMH FRVLAKALRL SGGDHIHAGT VVGKLEGERD VTLGFVDLLR DDYIEKDRSR GVYFTQDWVS LPGVLPVASG GIHVWHMPAL TEIFGDDSVL QFGGGTLGHP WGNAPGAVAN RVASEACVQA RNEGRDLARE GNEIIREAAK WSPDLAAACE VWKEIKFEYE TMNTL* // ID BA000029_18 STANDARD; PRT; 539 AA. AC BA000029; DT Thu Jul 9 18:14:06 2009 DE Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete OS mitochondrion Oryza sativa (japonica cultivar-group) OC Oryza sativa (japonica cultivar-group) RN [1] RL Mol. Genet. Genomics 268 (4), 434-445 (2002) RL PUBMED 12471441 FT Full length CDS FT GENE : rps3 FT NOTE : ORIGIN seq error: add g between 172784g and 172785a FT LOCUS_TAG : FT PROTEIN_ID : BAC19869.1 FT PROTEIN_NAME : Ribosomal protein S3 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 25/2 FT EDITING : 20 P(Cca) -> S(Tca) FT EDITING : 22 R(Cgg) -> W(Tgg) FT EDITING : 23 F(ttC) -> F(ttT) FT EDITING : 31 S(tCa) -> L(tTa) FT EDITING : 168 S(tCa) -> L(tTa) FT EDITING : 215 S(tCg) -> L(tTg) FT EDITING : 319 P(cCa) -> L(cTa) FT CODON_START : 1 CL CDNALEN 1617 NT; CD 1 atggcacgaa aaggaaatcc aatttcggta agacttgatc tgaatcgtag CD 51 ttcagatCca agtCggttCa gtgattatta ttatggtaaa tCattgtatc CD 101 aggatgtcaa tcttagatct tatttcagtt cgatacgtcc acctacgata CD 151 ctcacctttg gctttcgtct cggtaggtgt attattctac attttcccaa CD 201 aaggacattc attcatttct ttcttccccg tcgaccacta cgactaaaac CD 251 gacgcgacaa atcaagaccc ggaaaggata agggccggtg gtgggcattt CD 301 gggaaagtcg ggccgatcgg gtgtcttcat tcaagcgagg gtacagagga CD 351 agaacgaaac gaagtgagag gccggggggc agggaaaaga gtcgagtcga CD 401 tcgaccggga gaagcaaaac gaaatcagga tttggccgaa aaagatgcaa CD 451 cgttatggat accatgaccg atcaccatcg agaaagaaga atttttctaa CD 501 atCacttcgg gtgagcgggg ccttcaagca tccgaaatac gccggggttg CD 551 taaatgacat agccttcctg atagaaaatg acggcccgac gagtcatcta CD 601 ctaaaaagga ccctccccgc tgtgcgcccc tccttgaatt attCggtcat CD 651 gcaatacttt tttaatacaa agaacaaaat gcatttcgac cccgtcgtag CD 701 ttctcaatca tttcgtggca ccgggtgtgg ctgaaccatc tacgatgggg CD 751 ggagcgaagg gaggaagctt agataagaga atacgctctc gcatcgcttt CD 801 ttttgtagaa agctcgacca gcgagaaaaa gtgtttggcc cgagccaaaa CD 851 agaggttgat ccacttcatt cgccaagcga atgatcttcg cttcgcggga CD 901 acaacaaaaa ccaccatctc gctctttcct ttcttcggtg ctaccttttt CD 951 ttttcCaagg gatggggttg gggtgtataa taacccattt tttgagtatg CD 1001 cccgggaaca actcctaggt caattaagga tcaaatgtag gaacctcatg CD 1051 ggtaaggata aggtaatgga attgatagag aaattcatct acctaggtag CD 1101 gataggcaaa ttgataaagg gaatagagat gatgatagag atcatactga CD 1151 gaaagaggat aattccgtac gggtacaact cttatttgaa cgaagtgcaa CD 1201 aaaatgcgat cttttttgtc taatagaaca aacactaata ccttaattga CD 1251 gtcggtaaag atcaaatctg tttatcaaag tgcttctctg attgctcaag CD 1301 acatctcttt tcaactgggg aacaatccaa tctcatttcg ttccattttt CD 1351 agtcaaatag tgaaggatat tccattaata atgccaaaag gggtggaggg CD 1401 gatacgtatt tgttgttctg gtcgattagg gggtgcggaa atagctagaa CD 1451 ctgaatgcgg aaagtatgga aaaacatctt gtaatgtatt taaccagaaa CD 1501 atcgattatg ctcttgcgga agtatccact cgtaacggaa tttcaggtgt CD 1551 caaagtgcgg atctcatata gtcaaaataa gaagggacgt gctatatccg CD 1601 aaacgtacga aatatag FT EDITED CDNA CD 1 atggcacgaa aaggaaatcc aatttcggta agacttgatc tgaatcgtag CD 51 ttcagatTca agtTggttTa gtgattatta ttatggtaaa tTattgtatc CD 101 aggatgtcaa tcttagatct tatttcagtt cgatacgtcc acctacgata CD 151 ctcacctttg gctttcgtct cggtaggtgt attattctac attttcccaa CD 201 aaggacattc attcatttct ttcttccccg tcgaccacta cgactaaaac CD 251 gacgcgacaa atcaagaccc ggaaaggata agggccggtg gtgggcattt CD 301 gggaaagtcg ggccgatcgg gtgtcttcat tcaagcgagg gtacagagga CD 351 agaacgaaac gaagtgagag gccggggggc agggaaaaga gtcgagtcga CD 401 tcgaccggga gaagcaaaac gaaatcagga tttggccgaa aaagatgcaa CD 451 cgttatggat accatgaccg atcaccatcg agaaagaaga atttttctaa CD 501 atTacttcgg gtgagcgggg ccttcaagca tccgaaatac gccggggttg CD 551 taaatgacat agccttcctg atagaaaatg acggcccgac gagtcatcta CD 601 ctaaaaagga ccctccccgc tgtgcgcccc tccttgaatt attTggtcat CD 651 gcaatacttt tttaatacaa agaacaaaat gcatttcgac cccgtcgtag CD 701 ttctcaatca tttcgtggca ccgggtgtgg ctgaaccatc tacgatgggg CD 751 ggagcgaagg gaggaagctt agataagaga atacgctctc gcatcgcttt CD 801 ttttgtagaa agctcgacca gcgagaaaaa gtgtttggcc cgagccaaaa CD 851 agaggttgat ccacttcatt cgccaagcga atgatcttcg cttcgcggga CD 901 acaacaaaaa ccaccatctc gctctttcct ttcttcggtg ctaccttttt CD 951 ttttcTaagg gatggggttg gggtgtataa taacccattt tttgagtatg CD 1001 cccgggaaca actcctaggt caattaagga tcaaatgtag gaacctcatg CD 1051 ggtaaggata aggtaatgga attgatagag aaattcatct acctaggtag CD 1101 gataggcaaa ttgataaagg gaatagagat gatgatagag atcatactga CD 1151 gaaagaggat aattccgtac gggtacaact cttatttgaa cgaagtgcaa CD 1201 aaaatgcgat cttttttgtc taatagaaca aacactaata ccttaattga CD 1251 gtcggtaaag atcaaatctg tttatcaaag tgcttctctg attgctcaag CD 1301 acatctcttt tcaactgggg aacaatccaa tctcatttcg ttccattttt CD 1351 agtcaaatag tgaaggatat tccattaata atgccaaaag gggtggaggg CD 1401 gatacgtatt tgttgttctg gtcgattagg gggtgcggaa atagctagaa CD 1451 ctgaatgcgg aaagtatgga aaaacatctt gtaatgtatt taaccagaaa CD 1501 atcgattatg ctcttgcgga agtatccact cgtaacggaa tttcaggtgt CD 1551 caaagtgcgg atctcatata gtcaaaataa gaagggacgt gctatatccg CD 1601 aaacgtacga aatatag SQ SEQUENCE 539 AA; MARKGNPISV RLDLNRSSDS SWFSDYYYGK LLYQDVNLRS YFSSIRPPTI LTFGFRLGRC IILHFPKRTF IHFFLPRRPL RLKRRDKSRP GKDKGRWWAF GKVGPIGCLH SSEGTEEERN EVRGRGAGKR VESIDREKQN EIRIWPKKMQ RYGYHDRSPS RKKNFSKLLR VSGAFKHPKY AGVVNDIAFL IENDGPTSHL LKRTLPAVRP SLNYLVMQYF FNTKNKMHFD PVVVLNHFVA PGVAEPSTMG GAKGGSLDKR IRSRIAFFVE SSTSEKKCLA RAKKRLIHFI RQANDLRFAG TTKTTISLFP FFGATFFFLR DGVGVYNNPF FEYAREQLLG QLRIKCRNLM GKDKVMELIE KFIYLGRIGK LIKGIEMMIE IILRKRIIPY GYNSYLNEVQ KMRSFLSNRT NTNTLIESVK IKSVYQSASL IAQDISFQLG NNPISFRSIF SQIVKDIPLI MPKGVEGIRI CCSGRLGGAE IARTECGKYG KTSCNVFNQK IDYALAEVST RNGISGVKVR ISYSQNKKGR AISETYEI* // ID DQ645537_8 STANDARD; PRT; 434 AA. AC DQ645537; DT Thu Jul 9 18:14:07 2009 DE Zea luxurians mitochondrion, complete genome. OS mitochondrion Zea luxurians OC Zea luxurians RN [1] RL Unpublished FT Full length CDS FT GENE : ccmFC-1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABG65664.1 FT PROTEIN_NAME : cytochrome c biogenesis FC-1 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 252/2 FT EDITING : 434 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1302 NT; CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatC CD 1301 ga FT EDITED CDNA CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaattttat gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccattgac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatT CD 1301 ga SQ SEQUENCE 434 AA; MVQLQNFFFF ITSMVVPRGT AAPVLLKWFV SRDVPTGASS SNGTIIPIPI SLFPFLVYLH SRKFIRSMDR AKSGVLVKAS RPILLPDKIG RSSSARNALF RFVPVLHFLI IESMGDLSYL ESFCGLLCLQ FFRTLFSLPR DRSAKRERAL RSKGQTLRPK GNEQQNDKMR CPGHPHIERR VEGFGPVAFP APPSSSGACL GGVPPEIGLE ALALPTSRLL MAVGHDYYKK VKMNLSISHG GVCIFMLGVL LSNTNKIQFT QRLPLGPELH MGKERCCLRG LDHLHGPTSH SICGNFMIYK PSPTSERFMF EHDESLRADL LPINFPASYE NGKLEDFLMK NHEHKNFWFS MFPERRYYWS RETRSTTEVA IHTNPLTDLY APIGTGSSRT GGWYTTIMKL PFIFSIRIGF LLASSGGSRS LLRQLQKDKL HWN* // ID DQ984517_13 STANDARD; PRT; 434 AA. AC DQ984517; DT Thu Jul 9 18:14:07 2009 DE Tripsacum dactyloides cultivar Pete mitochondrion, complete genome. OS mitochondrion Tripsacum dactyloides (gama grass) OC Tripsacum dactyloides RN [1] RL Unpublished FT Full length CDS FT GENE : ccmFC-1 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABI74643.1 FT PROTEIN_NAME : cytochrome c biogenesis FC FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 252/2 FT EDITING : 434 R(Cga) -> *(Tga) FT CODON_START : 1 CL CDNALEN 1302 NT; CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaatttttt gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccatttac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatC CD 1301 ga FT EDITED CDNA CD 1 atggtccaac tacagaactt cttctttttc attacttcca tggtcgtgcc CD 51 ccgtggcacg gcagcacccg tactattgaa atggttcgtc agtagagatg CD 101 ttcccactgg tgcctcttct tccaatggta ctataattcc tattcctatc CD 151 tctttattcc cttttttggt ctatctacat tcaaggaaat tcatacgctc CD 201 catggacaga gcaaaaagtg gagtgttggt caaagcaagc cgccctattc CD 251 tattaccaga caaaattggg agaagctcat ccgctagaaa tgctttattt CD 301 cgtttcgttc ccgttcttca tttccttatt atcgaatcca tgggggactt CD 351 gtcatattta gaatctttct gcggtctgct ctgtttacaa ttctttcgta CD 401 ctctcttctc tttaccacgc gataggtcag cgaagcgtga gcgggcgctc CD 451 cgaagtaaag gccaaacact tcggcctaag gggaatgagc aacaaaatga CD 501 caagatgagg tgccccgggc acccccatat agaaagaagg gtcgaaggtt CD 551 ttgggcctgt agctttcccc gcccccccct cgtcgagtgg tgcttgtttg CD 601 gggggtgtgc cacctgaaat cgggcttgaa gctctcgcct taccaacgag CD 651 ccgactgttg atggctgttg gtcacgacta ctacaaaaaa gtgaagatga CD 701 atctttctat ttcacatgga ggagtgtgca tctttatgtt gggtgttctt CD 751 ctgtctaata cgaataagat acagttcact caacgattgc ctttgggtcc CD 801 cgaactccat atggggaagg aacgttgttg tttgcgaggt ctcgatcatt CD 851 tacatggacc cacttctcat tccatttgtg ggaatttttt gatttataaa CD 901 ccgtccccaa cgagcgaaag gttcatgttt gaacatgatg aatcacttcg CD 951 tgccgacctg ttgcccataa actttcctgc ctcatatgag aatggaaaac CD 1001 tggaagattt tctgatgaag aatcacgaac ataagaattt ctggtttagc CD 1051 atgttcccag aaagaagata ctactggtcg cgagaaacga ggagcacgac CD 1101 tgaagtggct atacatacaa atccatttac ggatctatat gctccgattg CD 1151 gaactggaag ttccagaact ggcggctggt ataccaccat aatgaaattg CD 1201 ccttttattt ttagtattcg gataggattt ctgttggctt catcgggagg CD 1251 ctcgcgtagt ttgttacgtc aactccaaaa ggataagttg cattggaatT CD 1301 ga SQ SEQUENCE 434 AA; MVQLQNFFFF ITSMVVPRGT AAPVLLKWFV SRDVPTGASS SNGTIIPIPI SLFPFLVYLH SRKFIRSMDR AKSGVLVKAS RPILLPDKIG RSSSARNALF RFVPVLHFLI IESMGDLSYL ESFCGLLCLQ FFRTLFSLPR DRSAKRERAL RSKGQTLRPK GNEQQNDKMR CPGHPHIERR VEGFGPVAFP APPSSSGACL GGVPPEIGLE ALALPTSRLL MAVGHDYYKK VKMNLSISHG GVCIFMLGVL LSNTNKIQFT QRLPLGPELH MGKERCCLRG LDHLHGPTSH SICGNFLIYK PSPTSERFMF EHDESLRADL LPINFPASYE NGKLEDFLMK NHEHKNFWFS MFPERRYYWS RETRSTTEVA IHTNPFTDLY APIGTGSSRT GGWYTTIMKL PFIFSIRIGF LLASSGGSRS LLRQLQKDKL HWN* // ID DQ984517_24 STANDARD; PRT; 101 AA. AC DQ984517; DT Thu Jul 9 18:14:07 2009 DE Tripsacum dactyloides cultivar Pete mitochondrion, complete genome. OS mitochondrion Tripsacum dactyloides (gama grass) OC Tripsacum dactyloides RN [1] RL Unpublished FT Full length CDS FT GENE : nad4L FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : ABI74655.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 4L FT EVIDENCE : FT EXCEPTION : RNA editing FT REGIONS : 325724 - 326026 FT DIRECTIONS : negative FT EDITING : 101 Q(Caa) -> *(Taa) FT CODON_START : 1 CL CDNALEN 303 NT; CD 1 acggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttcgagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 Caa FT EDITED CDNA CD 1 acggatccta taaaatattt cactttttct atgatcatct ctattttagg CD 51 tattcgggga atcctcctta atagacgaaa tattcttatt atgtcaatgc CD 101 caattgaatc aatgttatta gctgtcaatt tgaacttttt ggtattttcc CD 151 gtttctttgg atgatatgat gggtcaatca tttgcttcat tagttccaac CD 201 agtggcagct gcggaatctg ctattggatt agccattttc gttattactt CD 251 ttcgagtccg agggactatt gctgtcgaat ttataaattg cattcaaggt CD 301 Taa SQ SEQUENCE 101 AA; TDPIKYFTFS MIISILGIRG ILLNRRNILI MSMPIESMLL AVNLNFLVFS VSLDDMMGQS FASLVPTVAA AESAIGLAIF VITFRVRGTI AVEFINCIQG * // ID Y14433_1 STANDARD; PRT; 489 AA. AC Y14433; DT Thu Jul 9 19:49:09 2009 DE Triticum aestivum mitochondrial nad2 gene, exon 1 and 2 and OS mitochondrion Triticum aestivum (bread wheat) OC Triticum aestivum RN [1] RL Mol. Gen. Genet. 258 (5), 503-511 (1998) RL PUBMED 9669332 FT Full length CDS FT GENE : nad2 FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA74778.1 FT PROTEIN_NAME : NADH dehydrogenase subunit 2 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 52/0 FT INTRON 182/2 FT INTRON 236/1 FT INTRON 427/1 FT EDITING : 9 S(tCc) -> F(tTc) FT EDITING : 101 F(ttC) -> F(ttT) FT EDITING : 112 S(tCt) -> F(tTt) FT EDITING : 119 P(cCa) -> L(cTa) FT EDITING : 121 P(Cct) -> S(Tct) FT EDITING : 123 R(Cgc) -> C(Tgc) FT EDITING : 130 P(Ccg) -> S(Tcg) FT EDITING : 132 H(Cat) -> Y(Tat) FT EDITING : 166 S(tCa) -> L(tTa) FT EDITING : 175 P(Ccc) -> S(Tcc) FT EDITING : 207 I(atC) -> I(atT) FT EDITING : 228 F(ttC) -> F(ttT) FT EDITING : 263 S(tCt) -> F(tTt) FT EDITING : 267 S(tCa) -> L(tTa) FT EDITING : 270 S(tCt) -> F(tTt) FT EDITING : 307 P(cCt) -> L(cTt) FT EDITING : 310 H(Cat) -> Y(Tat) FT EDITING : 320 R(Cgt) -> C(Tgt) FT EDITING : 321 T(aCt) -> I(aTt) FT EDITING : 343 S(tCa) -> L(tTa) FT EDITING : 353 P(CCa) -> L(TTa) FT EDITING : 376 S(tCg) -> L(tTg) FT EDITING : 416 P(CCa) -> L(TTa) FT EDITING : 426 R(Cgt) -> C(Tgt) FT EDITING : 433 A(gCg) -> V(gTg) FT EDITING : 466 T(aCt) -> I(aTt) FT EDITING : 467 S(tCa) -> L(tTa) FT EDITING : 468 S(tCC) -> F(tTT) FT EDITING : 470 P(CCa) -> L(TTa) FT EDITING : 472 P(ccC) -> P(ccT) FT EDITING : 474 P(Ccc) -> S(Tcc) FT EDITING : 486 S(tCa) -> L(tTa) FT CODON_START : 1 CL CDNALEN 1467 NT; CD 1 atgttcaatc tttttttagc ggtttCccca gagatcttta tcattaacgc CD 51 aaccttcatt ttgctcattc atggagttgt atttagtacc tctaagaaag CD 101 atgattatcc accgttagtt agtaatgtgg gttggcttgg attacttagt CD 151 gttctaataa ccttgcttct gctcgccgct ggcgcacctc tcctaactat CD 201 tgcccattta ttctggaata atttttttag gagggacaat tttacatatt CD 251 tctgccaaat ccttctatta ttaagtacgg ctggtaccat ttcgatgtgt CD 301 ttCgattttt tcgaaaaaga gaggtttgat gcttCtgaat tcattgtatt CD 351 aattcCactt CctactCgca gtatgctctt aatgatcCcg gctCatgatt CD 401 taattgccat gtatttagct attgagcttc aaagtttatg tttttatgtg CD 451 atcgcagcat caaaaagaaa gtctgaattt tccacggaag ccggctCaaa CD 501 atatttgatc ttaggtgcat ttCcctctgg aatattattg ttcggttgtt CD 551 ccatgatcta tgggtctact ggagctaccc acttcgatca attagccaag CD 601 attttgaccg gatacgaaat Cactggtgct cgatctagtg gtatttttat CD 651 ggggattctt tttatcgctg taggattcct attCaagatt actgcagttc CD 701 cttttcatat gtgggcacct gatatctatg agggttcacc caccccggtg CD 751 acagcattcc tttctattgc gcctaaaatc tctatttCtg caaatatgtC CD 801 acgtgtttCt attgttgctt cctatggggg tacattacaa caaatcttct CD 851 ttttctgcag cattgcttct atgatcttag gagcactggc cgccatggcc CD 901 caaacgaaag tcaaaagacC tctagctCat agttcgattg gacatgtagg CD 951 ttatattCgt aCtggtttct catgtggaac catagaagga attcaatcac CD 1001 tactaattgg tatatttatt tatgcatCaa tgacgataga tgcattcgcc CD 1051 atagttCCag cattacggca aacccgtgtc aaatatatag cggatttggg CD 1101 cgctctagcc aaaacgaatc ctatttCggc tatgaccttc tccattacaa CD 1151 tgttctcata cgcaggaata cccccgttag ccggcttttg tagcaaattc CD 1201 tatttgttct tcgccgcttt gggttgtggg gcttacttcc tagccCCagt CD 1251 gggagtagtg actagcgtta taggtCgttt ttattatata cgcttagCga CD 1301 aaagaatgtt ttttgataga cctaggacat ggattctata tgaaccaatg CD 1351 gatcgtgaca agtcgttact actagcaatg acttcctctt tcattaCttC CD 1401 atCCtttCCa tatccCtctC ccttgttcga tcttactcat caaatggcac CD 1451 tcagttCata tctgtaa FT EDITED CDNA CD 1 atgttcaatc tttttttagc ggtttTccca gagatcttta tcattaacgc CD 51 aaccttcatt ttgctcattc atggagttgt atttagtacc tctaagaaag CD 101 atgattatcc accgttagtt agtaatgtgg gttggcttgg attacttagt CD 151 gttctaataa ccttgcttct gctcgccgct ggcgcacctc tcctaactat CD 201 tgcccattta ttctggaata atttttttag gagggacaat tttacatatt CD 251 tctgccaaat ccttctatta ttaagtacgg ctggtaccat ttcgatgtgt CD 301 ttTgattttt tcgaaaaaga gaggtttgat gcttTtgaat tcattgtatt CD 351 aattcTactt TctactTgca gtatgctctt aatgatcTcg gctTatgatt CD 401 taattgccat gtatttagct attgagcttc aaagtttatg tttttatgtg CD 451 atcgcagcat caaaaagaaa gtctgaattt tccacggaag ccggctTaaa CD 501 atatttgatc ttaggtgcat ttTcctctgg aatattattg ttcggttgtt CD 551 ccatgatcta tgggtctact ggagctaccc acttcgatca attagccaag CD 601 attttgaccg gatacgaaat Tactggtgct cgatctagtg gtatttttat CD 651 ggggattctt tttatcgctg taggattcct attTaagatt actgcagttc CD 701 cttttcatat gtgggcacct gatatctatg agggttcacc caccccggtg CD 751 acagcattcc tttctattgc gcctaaaatc tctatttTtg caaatatgtT CD 801 acgtgtttTt attgttgctt cctatggggg tacattacaa caaatcttct CD 851 ttttctgcag cattgcttct atgatcttag gagcactggc cgccatggcc CD 901 caaacgaaag tcaaaagacT tctagctTat agttcgattg gacatgtagg CD 951 ttatattTgt aTtggtttct catgtggaac catagaagga attcaatcac CD 1001 tactaattgg tatatttatt tatgcatTaa tgacgataga tgcattcgcc CD 1051 atagttTTag cattacggca aacccgtgtc aaatatatag cggatttggg CD 1101 cgctctagcc aaaacgaatc ctatttTggc tatgaccttc tccattacaa CD 1151 tgttctcata cgcaggaata cccccgttag ccggcttttg tagcaaattc CD 1201 tatttgttct tcgccgcttt gggttgtggg gcttacttcc tagccTTagt CD 1251 gggagtagtg actagcgtta taggtTgttt ttattatata cgcttagTga CD 1301 aaagaatgtt ttttgataga cctaggacat ggattctata tgaaccaatg CD 1351 gatcgtgaca agtcgttact actagcaatg acttcctctt tcattaTttT CD 1401 atTTtttTTa tatccTtctT ccttgttcga tcttactcat caaatggcac CD 1451 tcagttTata tctgtaa SQ SEQUENCE 489 AA; MFNLFLAVFP EIFIINATFI LLIHGVVFST SKKDDYPPLV SNVGWLGLLS VLITLLLLAA GAPLLTIAHL FWNNFFRRDN FTYFCQILLL LSTAGTISMC FDFFEKERFD AFEFIVLILL STCSMLLMIS AYDLIAMYLA IELQSLCFYV IAASKRKSEF STEAGLKYLI LGAFSSGILL FGCSMIYGST GATHFDQLAK ILTGYEITGA RSSGIFMGIL FIAVGFLFKI TAVPFHMWAP DIYEGSPTPV TAFLSIAPKI SIFANMLRVF IVASYGGTLQ QIFFFCSIAS MILGALAAMA QTKVKRLLAY SSIGHVGYIC IGFSCGTIEG IQSLLIGIFI YALMTIDAFA IVLALRQTRV KYIADLGALA KTNPILAMTF SITMFSYAGI PPLAGFCSKF YLFFAALGCG AYFLALVGVV TSVIGCFYYI RLVKRMFFDR PRTWILYEPM DRDKSLLLAM TSSFIILFFL YPSSLFDLTH QMALSLYL* // ID X07566_1 STANDARD; PRT; 671 AA. AC X07566; DT Tue Jul 21 11:01:20 2009 DE Oenothera mitochondrial 5S rRNA and ND5 gene for NADH dehydrogenase OS mitochondrion Oenothera berteroana OC Oenothera berteroana RN [1] RL Mol. Gen. Genet. 212 (1), 56-65 (1988) RL PUBMED 3163767 FT Full length CDS FT GENE : NADH5 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAA30448.3 FT PROTEIN_NAME : NADH dehydrogenase subunit 5 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 77/2 FT INTRON 483/0 FT INTRON 490/1 FT INTRON 622/0 FT EDITING : 52 P(cCg) -> L(cTg) FT EDITING : 81 P(cCg) -> L(cTg) FT EDITING : 91 S(tCc) -> F(tTc) FT EDITING : 120 L(Ctt) -> F(Ttt) FT EDITING : 133 S(tCt) -> F(tTt) FT EDITING : 165 T(aCa) -> I(aTa) FT EDITING : 169 P(cCt) -> L(cTt) FT EDITING : 180 P(cCt) -> L(cTt) FT EDITING : 183 S(tCg) -> L(tTg) FT EDITING : 185 R(Cgt) -> C(Tgt) FT EDITING : 200 R(Cgt) -> C(Tgt) FT EDITING : 238 S(tCg) -> L(tTg) FT EDITING : 242 S(tCa) -> L(tTa) FT EDITING : 279 P(Cca) -> S(Tca) FT EDITING : 288 S(tCt) -> F(tTt) FT EDITING : 292 T(aCg) -> M(aTg) FT EDITING : 467 S(tCa) -> L(tTa) FT EDITING : 497 P(cCc) -> L(cTc) FT EDITING : 498 L(Ctc) -> F(Ttc) FT EDITING : 517 T(aCc) -> I(aTc) FT EDITING : 523 P(cCg) -> L(cTg) FT EDITING : 527 S(tCa) -> L(tTa) FT EDITING : 530 S(tCt) -> F(tTt) FT EDITING : 537 P(cCc) -> L(cTc) FT EDITING : 639 S(tCt) -> F(tTt) FT EDITING : 640 R(Cgt) -> C(Tgt) FT CODON_START : 1 CL CDNALEN 2013 NT; CD 1 atgtatctac ttatcgtatt tttgcccctg ctcggtagtg gagtagcagg CD 51 ttttttcgga cgttttctag gatcagaagg aagcgctata atgaccacta CD 101 cgtgcgtttc attctcttcg atcttatctt tgattgcttt ttatgaagtc CD 151 gcacCgggag ctagtgcttg ctatctaaaa attgctccat ggatctcatc CD 201 ggaaatgttt gatgcttctt ggggcttctt gttcgatagc cCgaccgtag CD 251 tgatgttaat tgtggttaca tCcataagta gcttggtcca tctttattcc CD 301 atttcatata tgtctgagga tccgcatagc cctcgattta tgtgttattt CD 351 atccattCtt acttttttta tgccaatgtt ggtgactgga gataactCtc CD 401 ttcaattatt cctgggatgg gaaggagtag gtcttgcttc atatttgtta CD 451 attcatttct ggtttacacg acttcaggca gataaagcag ctaCaaaagc CD 501 tatgcCtgtc aatcgagtag gtgattttgg attagctcCt gggatttCgg CD 551 gtCgttttac tctctttcaa acagtagact tttcaaccat ttttgctCgt CD 601 gctagtgccc ccagaaattc ttggatttct tgcaatatga gattgaatgc CD 651 cataactctt atttgtattt tacttcttat tggtgctgtt gggaaatccg CD 701 cacagatagg atCgcatact tggtCacccg atgctatgga gggtcccact CD 751 ccagtatccg ctttgattca tgcagctact atggtaacag ctggcgtttt CD 801 catgatagca aggtgctccc ctttatttga atacCcacct acggctttga CD 851 ttgttattac ttCtgcagga gctaCgacgt cattccttgc ggcaaccact CD 901 ggaatattac agaacgatct aaagagggtc atagcttatt caacttgcag CD 951 tcaattaggc tatatgatct ttgcttgcgg catctctaac tattcggtta CD 1001 gcgtctttca cttaatgaat cacgcgtttt tcaaagcatt actattcctg CD 1051 agtgcaggtt cggtgattca tgccatgtcg gatgagcaag atatgcggaa CD 1101 gatggggggg cttgcctcct cgttcccttt tacctatgcc atgatgctca CD 1151 tgggcagctt atctctaatt ggatttcctt ttctaactgg attttattcc CD 1201 aaagatgtga tcttagagct cgcttacact aagtatacca tcagtgggaa CD 1251 ctttgctttc tggttgggaa gtgtctctgt ccttttcact tcttattact CD 1301 cttttcgttt actttttcta acatttctag taccaactaa ttcattcggg CD 1351 cgagacatct tacgatgtca tgatgcgccc attcctatgg ccattccttC CD 1401 aatacttctg gctctcggga gtctctttgt aggatacttg gccaaagata CD 1451 tgatgattgg tttaggtacc aatttttggg ccaattcccC cCtcgtacta CD 1501 ccaaaaaatg agattcttgc cgaatccgag tttgctgctc caaccattaC CD 1551 caaactaata cctattcCgt ttagtacttC aggtgcttCt cttgcgtata CD 1601 atgtaaatcC cgtagcggat caattccaac gagcctttca aactagtact CD 1651 ttttgtaatc gactctatag cttcttcaat aaacgctggt tcttcgatca CD 1701 agttttgaat gactttctag tcagatcgtt cctgcgtttc ggatatgaag CD 1751 tctcattcga agctttagac aaaggtgcta ttgagatatt gggcccttat CD 1801 ggtatctcgt acacattccg acgattggcc gagcgaataa gtcaacttca CD 1851 aagtggattt gtttatcatt atgcctttgc aatgttactt ggtttaactc CD 1901 tatttgtgac cttttCtCgt atgtgggact ccctatcttc ttggatagat CD 1951 aatcgatcgt ctttcatttg gatagtgagt agtttttata ataaaaagtc CD 2001 aagtcaacaa taa FT EDITED CDNA CD 1 atgtatctac ttatcgtatt tttgcccctg ctcggtagtg gagtagcagg CD 51 ttttttcgga cgttttctag gatcagaagg aagcgctata atgaccacta CD 101 cgtgcgtttc attctcttcg atcttatctt tgattgcttt ttatgaagtc CD 151 gcacTgggag ctagtgcttg ctatctaaaa attgctccat ggatctcatc CD 201 ggaaatgttt gatgcttctt ggggcttctt gttcgatagc cTgaccgtag CD 251 tgatgttaat tgtggttaca tTcataagta gcttggtcca tctttattcc CD 301 atttcatata tgtctgagga tccgcatagc cctcgattta tgtgttattt CD 351 atccattTtt acttttttta tgccaatgtt ggtgactgga gataactTtc CD 401 ttcaattatt cctgggatgg gaaggagtag gtcttgcttc atatttgtta CD 451 attcatttct ggtttacacg acttcaggca gataaagcag ctaTaaaagc CD 501 tatgcTtgtc aatcgagtag gtgattttgg attagctcTt gggatttTgg CD 551 gtTgttttac tctctttcaa acagtagact tttcaaccat ttttgctTgt CD 601 gctagtgccc ccagaaattc ttggatttct tgcaatatga gattgaatgc CD 651 cataactctt atttgtattt tacttcttat tggtgctgtt gggaaatccg CD 701 cacagatagg atTgcatact tggtTacccg atgctatgga gggtcccact CD 751 ccagtatccg ctttgattca tgcagctact atggtaacag ctggcgtttt CD 801 catgatagca aggtgctccc ctttatttga atacTcacct acggctttga CD 851 ttgttattac ttTtgcagga gctaTgacgt cattccttgc ggcaaccact CD 901 ggaatattac agaacgatct aaagagggtc atagcttatt caacttgcag CD 951 tcaattaggc tatatgatct ttgcttgcgg catctctaac tattcggtta CD 1001 gcgtctttca cttaatgaat cacgcgtttt tcaaagcatt actattcctg CD 1051 agtgcaggtt cggtgattca tgccatgtcg gatgagcaag atatgcggaa CD 1101 gatggggggg cttgcctcct cgttcccttt tacctatgcc atgatgctca CD 1151 tgggcagctt atctctaatt ggatttcctt ttctaactgg attttattcc CD 1201 aaagatgtga tcttagagct cgcttacact aagtatacca tcagtgggaa CD 1251 ctttgctttc tggttgggaa gtgtctctgt ccttttcact tcttattact CD 1301 cttttcgttt actttttcta acatttctag taccaactaa ttcattcggg CD 1351 cgagacatct tacgatgtca tgatgcgccc attcctatgg ccattccttT CD 1401 aatacttctg gctctcggga gtctctttgt aggatacttg gccaaagata CD 1451 tgatgattgg tttaggtacc aatttttggg ccaattcccT cTtcgtacta CD 1501 ccaaaaaatg agattcttgc cgaatccgag tttgctgctc caaccattaT CD 1551 caaactaata cctattcTgt ttagtacttT aggtgcttTt cttgcgtata CD 1601 atgtaaatcT cgtagcggat caattccaac gagcctttca aactagtact CD 1651 ttttgtaatc gactctatag cttcttcaat aaacgctggt tcttcgatca CD 1701 agttttgaat gactttctag tcagatcgtt cctgcgtttc ggatatgaag CD 1751 tctcattcga agctttagac aaaggtgcta ttgagatatt gggcccttat CD 1801 ggtatctcgt acacattccg acgattggcc gagcgaataa gtcaacttca CD 1851 aagtggattt gtttatcatt atgcctttgc aatgttactt ggtttaactc CD 1901 tatttgtgac cttttTtTgt atgtgggact ccctatcttc ttggatagat CD 1951 aatcgatcgt ctttcatttg gatagtgagt agtttttata ataaaaagtc CD 2001 aagtcaacaa taa SQ SEQUENCE 671 AA; MYLLIVFLPL LGSGVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV ALGASACYLK IAPWISSEMF DASWGFLFDS LTVVMLIVVT FISSLVHLYS ISYMSEDPHS PRFMCYLSIF TFFMPMLVTG DNFLQLFLGW EGVGLASYLL IHFWFTRLQA DKAAIKAMLV NRVGDFGLAL GILGCFTLFQ TVDFSTIFAC ASAPRNSWIS CNMRLNAITL ICILLLIGAV GKSAQIGLHT WLPDAMEGPT PVSALIHAAT MVTAGVFMIA RCSPLFEYSP TALIVITFAG AMTSFLAATT GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPFTYA MMLMGSLSLI GFPFLTGFYS KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDILRCHDAP IPMAIPLILL ALGSLFVGYL AKDMMIGLGT NFWANSLFVL PKNEILAESE FAAPTIIKLI PILFSTLGAF LAYNVNLVAD QFQRAFQTST FCNRLYSFFN KRWFFDQVLN DFLVRSFLRF GYEVSFEALD KGAIEILGPY GISYTFRRLA ERISQLQSGF VYHYAFAMLL GLTLFVTFFC MWDSLSSWID NRSSFIWIVS SFYNKKSSQQ * // ID AJ006146_1 STANDARD; PRT; 254 AA. AC AJ006146; DT Tue Jul 21 14:18:09 2009 DE Acorus calamus mitochondrial cytochrome oxidase subunit II. OS mitochondrion Acorus calamus OC Acorus calamus RN [1] RL Mol. Gen. Genet. 259 (6), 591-600 (1998) RL PUBMED 9819051 FT Full length CDS FT GENE : coxII FT NOTE : FT LOCUS_TAG : FT PROTEIN_ID : CAA06892.1 FT PROTEIN_NAME : cytochrome oxidase subunit II FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 128/1 FT EDITING : 85 R(Cgg) -> W(Tgg) FT EDITING : 127 R(Cgg) -> W(Tgg) FT EDITING : 159 S(tCa) -> L(tTa) FT EDITING : 186 P(cCt) -> L(cTt) FT EDITING : 194 S(tCa) -> L(tTa) FT EDITING : 205 S(tCa) -> L(tTa) FT EDITING : 211 S(tCg) -> L(tTg) FT EDITING : 232 S(tCt) -> F(tTt) FT CODON_START : 1 CL CDNALEN 762 NT; CD 1 atgattgttc atgaatggct attcctcaca attgctcctt gtgatgcagc CD 51 ggaaccatgg caattaggat ttcaagacgc agcaacacct atgatgcaag CD 101 gaataacaga cttacatcac gatatctttt tcttcctcat tctgattttg CD 151 gttttcgtat tatggatgtt ggttcgcgct ttatggcatt tcgactataa CD 201 aaagcatccc attccacaaa ggattgttca tggaactact atcgagattc CD 251 ttCggaccat attacctagt atcatcctca tgtttatagc tataccatca CD 301 tttgctctat tatactcaat ggacgaggta gtcgtagatc cagccattac CD 351 tatcaaagcg attggacatc aatggtatCg gacttatgag tattcggact CD 401 ataatagttc cgacgaacaa tcactcactt ttgacagtta tatgatcaca CD 451 gaagatgatt tagaattggg tcaatCacgt ttattagaag tagacaatag CD 501 agtcgtttta ccagccaaca ctcatttacg tatgattgta acatctgctg CD 551 atgtacCtca tagttgggct gtaccttctt Caggtgtcaa atgtcatgct CD 601 gtacctggtc gttCaaatca gacctccatt tCggtacaac gagaaggagt CD 651 ttactatggt cagtgcagta gattttgtgg aactaatcat gcctCtatgc CD 701 ctatcgtcgt ggaagcagtt tccatgaaag attatggctc ttgggttcaa CD 751 aactttgaat aa FT EDITED CDNA CD 1 atgattgttc atgaatggct attcctcaca attgctcctt gtgatgcagc CD 51 ggaaccatgg caattaggat ttcaagacgc agcaacacct atgatgcaag CD 101 gaataacaga cttacatcac gatatctttt tcttcctcat tctgattttg CD 151 gttttcgtat tatggatgtt ggttcgcgct ttatggcatt tcgactataa CD 201 aaagcatccc attccacaaa ggattgttca tggaactact atcgagattc CD 251 ttTggaccat attacctagt atcatcctca tgtttatagc tataccatca CD 301 tttgctctat tatactcaat ggacgaggta gtcgtagatc cagccattac CD 351 tatcaaagcg attggacatc aatggtatTg gacttatgag tattcggact CD 401 ataatagttc cgacgaacaa tcactcactt ttgacagtta tatgatcaca CD 451 gaagatgatt tagaattggg tcaatTacgt ttattagaag tagacaatag CD 501 agtcgtttta ccagccaaca ctcatttacg tatgattgta acatctgctg CD 551 atgtacTtca tagttgggct gtaccttctt Taggtgtcaa atgtcatgct CD 601 gtacctggtc gttTaaatca gacctccatt tTggtacaac gagaaggagt CD 651 ttactatggt cagtgcagta gattttgtgg aactaatcat gcctTtatgc CD 701 ctatcgtcgt ggaagcagtt tccatgaaag attatggctc ttgggttcaa CD 751 aactttgaat aa SQ SEQUENCE 254 AA; MIVHEWLFLT IAPCDAAEPW QLGFQDAATP MMQGITDLHH DIFFFLILIL VFVLWMLVRA LWHFDYKKHP IPQRIVHGTT IEILWTILPS IILMFIAIPS FALLYSMDEV VVDPAITIKA IGHQWYWTYE YSDYNSSDEQ SLTFDSYMIT EDDLELGQLR LLEVDNRVVL PANTHLRMIV TSADVLHSWA VPSLGVKCHA VPGRLNQTSI LVQREGVYYG QCSRFCGTNH AFMPIVVEAV SMKDYGSWVQ NFE* //