LOCUS Y14434 6298 bp DNA linear PLN 14-NOV-2006 DEFINITION Triticum aestivum mitochondrial nad2 gene exons 3, 4 and 5, and trnY gene. ACCESSION Y14434 VERSION Y14434.1 GI:2326760 KEYWORDS mitochondrion; nad2 gene; NADH dehydrogenase subunit 2; transfer RNA-Tyr; trnY gene. SOURCE mitochondrion Triticum aestivum (bread wheat) ORGANISM Triticum aestivum Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Pooideae; Triticeae; Triticum. REFERENCE 1 AUTHORS Morawala-Patell,V., Gualberto,J.M., Lamattina,L., Grienenberger,J.M. and Bonnard,G. TITLE Cis- and trans-splicing and RNA editing are required for the expression of nad2 in wheat mitochondria JOURNAL Mol. Gen. Genet. 258 (5), 503-511 (1998) PUBMED 9669332 REFERENCE 2 (bases 1 to 6298) AUTHORS Bonnard,G. TITLE Direct Submission JOURNAL Submitted (05-AUG-1997) G. Bonnard, Institut de Biologie Moleculaire des Plantes du CNRS, 12 Rue du General Zimmer, 67084 Strasbourg Cedex, FRANCE FEATURES Location/Qualifiers source 1..6298 /organism="Triticum aestivum" /organelle="mitochondrion" /mol_type="genomic DNA" /strain="Capitole" /cultivar="Capitole" /db_xref="taxon:4565" /tissue_type="etiolated seedlings" gene 179..261 /gene="trnY" tRNA 179..261 /gene="trnY" /product="tRNA-Tyr" gene 900..5629 /gene="nad2" exon 900..1060 /gene="nad2" /number=3 /label=ex3 misc_feature 975 /gene="nad2" /note="C to U RNA editing" misc_feature 1038 /gene="nad2" /note="C to U RNA editing" exon 3472..4044 /gene="nad2" /number=4 /label=ex4 misc_feature 3553 /gene="nad2" /note="C to U RNA editing" misc_feature 3565 /gene="nad2" /note="C to U RNA editing" misc_feature 3574 /gene="nad2" /note="C to U RNA editing" misc_feature 3685 /gene="nad2" /note="C to U RNA editing" misc_feature 3693 modified by Kei Yura based on the paper /gene="nad2" /note="C to U RNA editing" misc_feature 3723 /gene="nad2" /note="C to U RNA editing" misc_feature 3727 /gene="nad2" /note="C to U RNA editing" misc_feature 3793 /gene="nad2" /note="C to U RNA editing" misc_feature 3822 /gene="nad2" /note="C to U RNA editing" misc_feature 3823 /gene="nad2" /note="C to U RNA editing" misc_feature 3892 /gene="nad2" /note="C to U RNA editing" misc_feature 4011 /gene="nad2" /note="C to U RNA editing" misc_feature 4012 /gene="nad2" /note="C to U RNA editing" misc_feature 4041 /gene="nad2" /note="C to U RNA editing" exon 5442..5629 /gene="nad2" /number=5 /label=ex5 misc_feature 5460 /gene="nad2" /note="C to U RNA editing" misc_feature 5559 /gene="nad2" /note="C to U RNA editing" misc_feature 5562 /gene="nad2" /note="C to U RNA editing" misc_feature 5565 /gene="nad2" /note="C to U RNA editing" misc_feature 5566 /gene="nad2" /note="C to U RNA editing" misc_feature 5570 /gene="nad2" /note="C to U RNA editing" misc_feature 5571 /gene="nad2" /note="C to U RNA editing" misc_feature 5578 /gene="nad2" /note="C to U RNA editing" misc_feature 5582 /gene="nad2" /note="C to U RNA editing" misc_feature 5619 /gene="nad2" /note="C to U RNA editing" 3'UTR 5630..5668 ORIGIN 1 aagctttgcc ccttgcttta cataaatgga ttgttatgaa cttactaaat gaccttattt 61 attctcccgg aacgctagca aatctaatag ttccatctgc tcttcttaac ttaagacgaa 121 ggccgccatc cttcttattc aggaaccctt tgtttgagga gggcgtatcc ccgggaaggg 181 gagagtggcc gagcggtcaa aagcgacaga ctgtaaatct gttgaaggtt ttctacgtag 241 gttcgaatcc tgcctctccc acttgttgta gacttaagag aagagaaagt aggcggaagc 301 ctaggagggc caaccgagcg aagctctttt tttttgccgt gccgtgaagt gcaattttct 361 cgtatgcgtt ttagagaggt tgtcgaaaaa agacgatcta tagagattcc ccatctatat 421 ccaatcgagg atagaagcga gtcgcttccg gcgtcggctt gtagtctctg cagtcggcac 481 acgcacgcgc ccgccatcat gcctccttgg ttcgggacga agccaagcga gacatacgat 541 agacgaagga agcgcccacc cagcaggagg gctaaaacct gtagttttga agttgcaaac 601 taccagcttc gaagctggag tgctttagcc cttttttaag caagaatcac cgtcttgagc 661 gaccttgcgc gctcaagaac aagcaaggga tgagcgcttt gttgctaaag cggatacgtt 721 ttcttgctgg ggaaggctag tttgatcgag gattggagag gagggagagg tggaataaaa 781 agctcgggat ggattttgga gtctttgtgc gagccgtatg cggtgagagt cgcacgtacg 841 gtaaggaggg gggttcgcgt ctatacgtgt agtgtggtgg ttgggcctac ccaccctatt 901 tgttccatga tctatgggtc tactggagct acccacttcg atcaattagc caagattttg 961 accggatacg aaatcactgg tgctcgatct agtggtattt ttatggggat tctttttatc 1021 gctgtaggat tcctattcaa gattactgca gttccttttc gggcggctgt aggacggacg 1081 gccccctata ggtagtaggg tagggtgggt ggtaccgctc agatagcggc caatcctcct 1141 aactgcgcgc gggccgggct tagagcgcgt gaaactcatc actacctcgt aagggcgttg 1201 agaccatagc atgttacaca aaagcgccgc tttctcagga gtgttgtcac acagctgccc 1261 gactagaaga gctactcgct ctgtagtgtt gtcacacaag ataagcacgc cgcccgcctg 1321 ctggccgggc gaatcgaagt tatcttccgg tcaactgtcc acccagtcaa gtgcaaaaaa 1381 cacagtggaa tcacgcaacg cacgctgctg gtgtgcttcc tgcccacgag gaaagaagag 1441 cgacaaggtt cagatttgac tgtttgcagc atgggagctg attacccaaa aaatccctgg 1501 gaaaaaagaa aagatatctc ggtaacgaaa accataggag gctgtattgg cgagatccaa 1561 gggttcacag cagcccaaaa gaaaaaccgc ctggaagtcc gaggaccttt agtaccgtac 1621 cgaaccagca gccttcgcgc caagcgacga ccgcccttgt ccctttcctt tttccattca 1681 gcctacttct tagctttgtt ccgtcagtct aaggcaaagc ttaagtggtt tgcctacctt 1741 acccacttga tgaaagggaa cgaacttcgt ttccttggcg gctttatgga tggattcagt 1801 cagaaaaaac tccttccttt tgaaaaaagt gacgctttgc gtcttcgctt ccgagggtta 1861 gggtataggc cgtttcgagc aagctttcgc tttttctccc ggctttctac aactttcgct 1921 ttagcttcca aaggcgaccc aatgaccttt ccggaattgg aagtattcgt cgccctaccc 1981 taagaaagaa gtcactataa aacagcttgc cctccagaag taccaaaggt gcgcggacgc 2041 cggtgaaaat gaatatgttt gctactgaaa gaagcctgcc tattgactaa tattcgtctt 2101 tagaatgaaa gtagctatga agcccaatct atactgtcga ttcaaaaggg ggcatagtca 2161 tatgggtggg gtgtttgtgg ggagctgcct tggatatgag gaattcctcc aatctaaaaa 2221 aaaaaatgaa caaagaaaaa gtccgtgacg aagatctttc ttttctatca atagatagga 2281 atgagtgttc gttatagggg ataggatcca tctgctctct ctctctctct attttctttg 2341 atgcaattta gagagaaaga gcagtgcgaa ttagaaaaaa aagagaatcg ggagatgatt 2401 ccaaaataga tacatagaca tctcaagtaa agggatgtat atattattcc tatatatatc 2461 atctatctat gaaaaaagta aacagagttc gtttttggtt ccccgaagcc ccgaatggat 2521 tggatcgttt ctgcttctgc caacgaaatg aagcctcgcc ccttccgaat gcttctccga 2581 tcctgaagtt ctcgcgaaga gaataagatg cagctccccc tccctctgtc tttttcgctt 2641 tgctaatctt cccctctaac gcgggccggg cttaggcggg cgcgggagga agaaagaaag 2701 tcgaagagcg tcttctcctt tgtccttttt tcagtgcaac acaggaaagc accctctttt 2761 tgtaatccct gcagcttccc agaggcttgc ttttttttta ttgaacgcat ggcgtagcta 2821 ggacccctcc aatcatgttt gagcctatgt tcacccgggg ccaaaaaagg agaattccgg 2881 aatgcctgcc gacgttcaga taaggtgcat atcccttacc actaaaggaa aggctcgacg 2941 aaggggggga tattagctgg gtaaggaaaa cgctttcgga gattgagatg tcgatttgtt 3001 tttcatcgaa aaggaagaag gccgagggga tagcagcctt ccttcgggct ttgctgccga 3061 cgttctaata aagaattccg gctcggcccg ggaaagcgct ggcaacaaca taaagaaagg 3121 ggtccatgta gctgctgcgc ccgcccactg agcagcaggt tcggcatcta ctacaaaaga 3181 gagaatccac ttcagataac cacgtctctg ctaggcagcg tgtggaatgg ccgagagcgg 3241 accaaatgga tatataatcc aagccgagag tgagttacgt gaacagccgt ctgatggaaa 3301 caactttcac gttcggttca gagagcactt ttttcgttga gaataagtcc ttcccttttg 3361 tgtgaattcc ccagcggcga attaacaact tgtggggccc tatctattca atctctcgag 3421 ccccaagaaa acccccctct ccctcggact caatctctct tttgactcta tatatgtggg 3481 cacctgatat ctatgagggt tcacccaccc cggtgacagc attcctttct attgcgccta 3541 aaatctctat ttctgcaaat atgtcacgtg tttctattgt tgcttcctat gggggtacat 3601 tacaacaaat cttctttttc tgcagcattg cttctatgat cttaggagca ctggccgcca 3661 tggcccaaac gaaagtcaaa agacctctag ctcatagttc gattggacat gtaggttata 3721 ttcgtactgg tttctcatgt ggaaccatag aaggaattca atcactacta attggtatat 3781 ttatttatgc atcaatgacg atagatgcat tcgccatagt tccagcatta cggcaaaccc 3841 gtgtcaaata tatagcggat ttgggcgctc tagccaaaac gaatcctatt tcggctatga 3901 ccttctccat tacaatgttc tcatacgcag gaataccccc gttagccggc ttttgtagca 3961 aattctattt gttcttcgcc gctttgggtt gtggggctta cttcctagcc ccagtgggag 4021 tagtgactag cgttataggt cgttgggcgg ccggaaggtt gccatgagta aggttgggag 4081 accgaaggca gttttccgtg caccggacac gtagcttacc gaatcagttg caacacagat 4141 gggaatgcat gctacgaaag acagggtcga gtctgataca tcaaccgtcg actccatatc 4201 cttgtacgag tccacaatca ctacacgaga tgaacctggg tttggtgaat ggaagttggc 4261 cttaggtgta ataggactcc cagttactgc gcgcgatcgt atactgaggt gctccccgtc 4321 ggttgttgga acgacgcgag ccgggccggg cctcgattcc tttcaaaaag atgaagggac 4381 agaggtgact aattccccat ctcatttggg gcggaaaacg aatcgacatc tcgatgtgat 4441 acagcccttt ccattttcgt tgggaaagaa cggcgaagtc catccgaacc ctccaatgaa 4501 gaaataagag gagagcaagc aatgggcgaa gcgcatgcgg aaggggcacg gagaaataaa 4561 gaagtgtggg ggagaagcag ccgagctcat tcccttcgct tcctgggccc aaagcagtgc 4621 tttgtttcct ggccaaatca aggatttggg gctgattgca aaagatatct gaatagaaag 4681 atagatccat ccatctatcc agatatctaa aaaagaatcg atttcgattt catgaaacct 4741 ttgattcaaa gaactgcgct tagccccccc gctcatgaaa cggctctgct gcaatggatg 4801 gcagagggtc cgtagtaccc gaagcactgg agtgatccag tagccgggaa ggggcctaga 4861 agtgcctact actacaccac acttggctct acacatttac agagcttacc cctgtccagt 4921 gtctggcaga acgttggggg cttcaatcgt cgactcgtta tccccatctc agcccaggct 4981 aacggagcct gacttattca ggggagagag tggagcctat cgaagcactc ttgagagtaa 5041 gatccttggc tcctcttcat tctctacagg ggtctctgcc cacatggaag cggggcagag 5101 atggataaga tcaaacacgg gaataagaag catttgaaat gcctttttga tcattttgat 5161 agagggggat ggataaagtg ggcaaaacag actcacattt ttcaatcgaa aagatgggtt 5221 cctttttcgt ctcgacaaag aaagaatcat cttgaaaacg ctcctaaccc cttcgtaggg 5281 ccgtgtatag taagtgatcc gaacctgccc ggagcgagcc ccccttagag gcaagtgaag 5341 ttggtgagcc gtatgatggg caactatctt cctgcggttc ggagaggact cagctgttag 5401 ttagtacccc cttggtttcg gggtggaccc tttcactcta ttttattata tacgcttagc 5461 gaaaagaatg ttttttgata gacctaggac atggattcta tatgaaccaa tggatcgtga 5521 caagtcgtta ctactagcaa tgacttcctc tttcattact tcatcctttc catatccctc 5581 tcccttgttc gatcttactc atcaaatggc actcagttca tatctgtaag ttcgttcgat 5641 cattgacaag gttcaaagaa agggtgggcc attcaccatg aaggctaaaa gcgagatagg 5701 ctttactgga cattttcgct tacaaaggcg aagacaattc cgcgtttttt cagccgattc 5761 tccgaaattt aagacaatta tcctcactca aacttcaaaa agtccttttt tttctgatgt 5821 aaattctgtc tgtctccttt gtccttccta acgctagtct agtctccgat taaaggattg 5881 atacgggcgt gcttccttgc agagggttgt tttagacacc tacccaccag aaattcgctt 5941 tgccacccag gtataaccaa agcctccaca aggaatatta ctactgggtc catcacgtgt 6001 ccagataccg gtgcatccct tgccgtttcc ccatcggctg aagttggatc aaagtccccg 6061 gacgcgaatg ctcattatag aaagaactag gcctacttag gtaaacaggc accccatcac 6121 taccgtagta gttgaaatct ctaacttagg tgcgtttgcc cattacttct acccatctac 6181 gcgattctga gatccagcca ttggaactga gagatccccg ctgtttgacc tactcaagta 6241 ggctttctat tgaatatcca cccgtggtaa ttgcttgact ggtagaagca ccaagctt //