ID X07566_1 STANDARD; PRT; 671 AA. AC X07566; DT Tue Jul 21 11:01:20 2009 DE Oenothera mitochondrial 5S rRNA and ND5 gene for NADH dehydrogenase OS mitochondrion Oenothera berteroana OC Oenothera berteroana RN [1] RL Mol. Gen. Genet. 212 (1), 56-65 (1988) RL PUBMED 3163767 FT Full length CDS FT GENE : NADH5 FT NOTE : Protein sequence is in conflict with the conceptual FT LOCUS_TAG : FT PROTEIN_ID : CAA30448.3 FT PROTEIN_NAME : NADH dehydrogenase subunit 5 FT EVIDENCE : FT EXCEPTION : RNA editing FT INTRON 77/2 FT INTRON 483/0 FT INTRON 490/1 FT INTRON 622/0 FT EDITING : 52 P(cCg) -> L(cTg) FT EDITING : 81 P(cCg) -> L(cTg) FT EDITING : 91 S(tCc) -> F(tTc) FT EDITING : 120 L(Ctt) -> F(Ttt) FT EDITING : 133 S(tCt) -> F(tTt) FT EDITING : 165 T(aCa) -> I(aTa) FT EDITING : 169 P(cCt) -> L(cTt) FT EDITING : 180 P(cCt) -> L(cTt) FT EDITING : 183 S(tCg) -> L(tTg) FT EDITING : 185 R(Cgt) -> C(Tgt) FT EDITING : 200 R(Cgt) -> C(Tgt) FT EDITING : 238 S(tCg) -> L(tTg) FT EDITING : 242 S(tCa) -> L(tTa) FT EDITING : 279 P(Cca) -> S(Tca) FT EDITING : 288 S(tCt) -> F(tTt) FT EDITING : 292 T(aCg) -> M(aTg) FT EDITING : 467 S(tCa) -> L(tTa) FT EDITING : 497 P(cCc) -> L(cTc) FT EDITING : 498 L(Ctc) -> F(Ttc) FT EDITING : 517 T(aCc) -> I(aTc) FT EDITING : 523 P(cCg) -> L(cTg) FT EDITING : 527 S(tCa) -> L(tTa) FT EDITING : 530 S(tCt) -> F(tTt) FT EDITING : 537 P(cCc) -> L(cTc) FT EDITING : 639 S(tCt) -> F(tTt) FT EDITING : 640 R(Cgt) -> C(Tgt) FT CODON_START : 1 CL CDNALEN 2013 NT; CD 1 atgtatctac ttatcgtatt tttgcccctg ctcggtagtg gagtagcagg CD 51 ttttttcgga cgttttctag gatcagaagg aagcgctata atgaccacta CD 101 cgtgcgtttc attctcttcg atcttatctt tgattgcttt ttatgaagtc CD 151 gcacCgggag ctagtgcttg ctatctaaaa attgctccat ggatctcatc CD 201 ggaaatgttt gatgcttctt ggggcttctt gttcgatagc cCgaccgtag CD 251 tgatgttaat tgtggttaca tCcataagta gcttggtcca tctttattcc CD 301 atttcatata tgtctgagga tccgcatagc cctcgattta tgtgttattt CD 351 atccattCtt acttttttta tgccaatgtt ggtgactgga gataactCtc CD 401 ttcaattatt cctgggatgg gaaggagtag gtcttgcttc atatttgtta CD 451 attcatttct ggtttacacg acttcaggca gataaagcag ctaCaaaagc CD 501 tatgcCtgtc aatcgagtag gtgattttgg attagctcCt gggatttCgg CD 551 gtCgttttac tctctttcaa acagtagact tttcaaccat ttttgctCgt CD 601 gctagtgccc ccagaaattc ttggatttct tgcaatatga gattgaatgc CD 651 cataactctt atttgtattt tacttcttat tggtgctgtt gggaaatccg CD 701 cacagatagg atCgcatact tggtCacccg atgctatgga gggtcccact CD 751 ccagtatccg ctttgattca tgcagctact atggtaacag ctggcgtttt CD 801 catgatagca aggtgctccc ctttatttga atacCcacct acggctttga CD 851 ttgttattac ttCtgcagga gctaCgacgt cattccttgc ggcaaccact CD 901 ggaatattac agaacgatct aaagagggtc atagcttatt caacttgcag CD 951 tcaattaggc tatatgatct ttgcttgcgg catctctaac tattcggtta CD 1001 gcgtctttca cttaatgaat cacgcgtttt tcaaagcatt actattcctg CD 1051 agtgcaggtt cggtgattca tgccatgtcg gatgagcaag atatgcggaa CD 1101 gatggggggg cttgcctcct cgttcccttt tacctatgcc atgatgctca CD 1151 tgggcagctt atctctaatt ggatttcctt ttctaactgg attttattcc CD 1201 aaagatgtga tcttagagct cgcttacact aagtatacca tcagtgggaa CD 1251 ctttgctttc tggttgggaa gtgtctctgt ccttttcact tcttattact CD 1301 cttttcgttt actttttcta acatttctag taccaactaa ttcattcggg CD 1351 cgagacatct tacgatgtca tgatgcgccc attcctatgg ccattccttC CD 1401 aatacttctg gctctcggga gtctctttgt aggatacttg gccaaagata CD 1451 tgatgattgg tttaggtacc aatttttggg ccaattcccC cCtcgtacta CD 1501 ccaaaaaatg agattcttgc cgaatccgag tttgctgctc caaccattaC CD 1551 caaactaata cctattcCgt ttagtacttC aggtgcttCt cttgcgtata CD 1601 atgtaaatcC cgtagcggat caattccaac gagcctttca aactagtact CD 1651 ttttgtaatc gactctatag cttcttcaat aaacgctggt tcttcgatca CD 1701 agttttgaat gactttctag tcagatcgtt cctgcgtttc ggatatgaag CD 1751 tctcattcga agctttagac aaaggtgcta ttgagatatt gggcccttat CD 1801 ggtatctcgt acacattccg acgattggcc gagcgaataa gtcaacttca CD 1851 aagtggattt gtttatcatt atgcctttgc aatgttactt ggtttaactc CD 1901 tatttgtgac cttttCtCgt atgtgggact ccctatcttc ttggatagat CD 1951 aatcgatcgt ctttcatttg gatagtgagt agtttttata ataaaaagtc CD 2001 aagtcaacaa taa FT EDITED CDNA CD 1 atgtatctac ttatcgtatt tttgcccctg ctcggtagtg gagtagcagg CD 51 ttttttcgga cgttttctag gatcagaagg aagcgctata atgaccacta CD 101 cgtgcgtttc attctcttcg atcttatctt tgattgcttt ttatgaagtc CD 151 gcacTgggag ctagtgcttg ctatctaaaa attgctccat ggatctcatc CD 201 ggaaatgttt gatgcttctt ggggcttctt gttcgatagc cTgaccgtag CD 251 tgatgttaat tgtggttaca tTcataagta gcttggtcca tctttattcc CD 301 atttcatata tgtctgagga tccgcatagc cctcgattta tgtgttattt CD 351 atccattTtt acttttttta tgccaatgtt ggtgactgga gataactTtc CD 401 ttcaattatt cctgggatgg gaaggagtag gtcttgcttc atatttgtta CD 451 attcatttct ggtttacacg acttcaggca gataaagcag ctaTaaaagc CD 501 tatgcTtgtc aatcgagtag gtgattttgg attagctcTt gggatttTgg CD 551 gtTgttttac tctctttcaa acagtagact tttcaaccat ttttgctTgt CD 601 gctagtgccc ccagaaattc ttggatttct tgcaatatga gattgaatgc CD 651 cataactctt atttgtattt tacttcttat tggtgctgtt gggaaatccg CD 701 cacagatagg atTgcatact tggtTacccg atgctatgga gggtcccact CD 751 ccagtatccg ctttgattca tgcagctact atggtaacag ctggcgtttt CD 801 catgatagca aggtgctccc ctttatttga atacTcacct acggctttga CD 851 ttgttattac ttTtgcagga gctaTgacgt cattccttgc ggcaaccact CD 901 ggaatattac agaacgatct aaagagggtc atagcttatt caacttgcag CD 951 tcaattaggc tatatgatct ttgcttgcgg catctctaac tattcggtta CD 1001 gcgtctttca cttaatgaat cacgcgtttt tcaaagcatt actattcctg CD 1051 agtgcaggtt cggtgattca tgccatgtcg gatgagcaag atatgcggaa CD 1101 gatggggggg cttgcctcct cgttcccttt tacctatgcc atgatgctca CD 1151 tgggcagctt atctctaatt ggatttcctt ttctaactgg attttattcc CD 1201 aaagatgtga tcttagagct cgcttacact aagtatacca tcagtgggaa CD 1251 ctttgctttc tggttgggaa gtgtctctgt ccttttcact tcttattact CD 1301 cttttcgttt actttttcta acatttctag taccaactaa ttcattcggg CD 1351 cgagacatct tacgatgtca tgatgcgccc attcctatgg ccattccttT CD 1401 aatacttctg gctctcggga gtctctttgt aggatacttg gccaaagata CD 1451 tgatgattgg tttaggtacc aatttttggg ccaattcccT cTtcgtacta CD 1501 ccaaaaaatg agattcttgc cgaatccgag tttgctgctc caaccattaT CD 1551 caaactaata cctattcTgt ttagtacttT aggtgcttTt cttgcgtata CD 1601 atgtaaatcT cgtagcggat caattccaac gagcctttca aactagtact CD 1651 ttttgtaatc gactctatag cttcttcaat aaacgctggt tcttcgatca CD 1701 agttttgaat gactttctag tcagatcgtt cctgcgtttc ggatatgaag CD 1751 tctcattcga agctttagac aaaggtgcta ttgagatatt gggcccttat CD 1801 ggtatctcgt acacattccg acgattggcc gagcgaataa gtcaacttca CD 1851 aagtggattt gtttatcatt atgcctttgc aatgttactt ggtttaactc CD 1901 tatttgtgac cttttTtTgt atgtgggact ccctatcttc ttggatagat CD 1951 aatcgatcgt ctttcatttg gatagtgagt agtttttata ataaaaagtc CD 2001 aagtcaacaa taa SQ SEQUENCE 671 AA; MYLLIVFLPL LGSGVAGFFG RFLGSEGSAI MTTTCVSFSS ILSLIAFYEV ALGASACYLK IAPWISSEMF DASWGFLFDS LTVVMLIVVT FISSLVHLYS ISYMSEDPHS PRFMCYLSIF TFFMPMLVTG DNFLQLFLGW EGVGLASYLL IHFWFTRLQA DKAAIKAMLV NRVGDFGLAL GILGCFTLFQ TVDFSTIFAC ASAPRNSWIS CNMRLNAITL ICILLLIGAV GKSAQIGLHT WLPDAMEGPT PVSALIHAAT MVTAGVFMIA RCSPLFEYSP TALIVITFAG AMTSFLAATT GILQNDLKRV IAYSTCSQLG YMIFACGISN YSVSVFHLMN HAFFKALLFL SAGSVIHAMS DEQDMRKMGG LASSFPFTYA MMLMGSLSLI GFPFLTGFYS KDVILELAYT KYTISGNFAF WLGSVSVLFT SYYSFRLLFL TFLVPTNSFG RDILRCHDAP IPMAIPLILL ALGSLFVGYL AKDMMIGLGT NFWANSLFVL PKNEILAESE FAAPTIIKLI PILFSTLGAF LAYNVNLVAD QFQRAFQTST FCNRLYSFFN KRWFFDQVLN DFLVRSFLRF GYEVSFEALD KGAIEILGPY GISYTFRRLA ERISQLQSGF VYHYAFAMLL GLTLFVTFFC MWDSLSSWID NRSSFIWIVS SFYNKKSSQQ * //