LOCUS       D14882                  1333 bp    DNA     linear   PLN 16-SEP-2006
DEFINITION  Osmunda cinnamomea var. fokiensis chloroplast rbcL gene for large
            subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase, partial
            cds.
ACCESSION   D14882
VERSION     D14882.1  GI:286135
KEYWORDS    .
SOURCE      chloroplast Osmunda cinnamomea var. fokiensis
  ORGANISM  Osmunda cinnamomea var. fokiensis
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Moniliformopses; Filicophyta; Filicopsida; Filicales; Osmundaceae;
            Osmunda.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Hasebe,M., Ito,M., Kofuji,R., Ueda,K. and Iwatsuki,K.
  TITLE     Phylogenetic relationships of ferns deduced from rbcL gene sequence
  JOURNAL   J. Mol. Evol. 37 (5), 476-482 (1993)
   PUBMED   8283479
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Hasebe,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-APR-1993) Mitsuyasu Hasebe, Botanical Gardens,
            Faculty of Science, University of Tokyo; 3-7-1 Hakusan, Bunkyo-ku,
            Tokyo 112, Japan (E-mail:mhasebe@tansei.cc.u-tokyo.ac.jp,
            Tel:81-03-3814-0138, Fax:81-03-3814-0139)
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Osmunda cinnamomea var. fokiensis"
                     /organelle="plastid:chloroplast"
                     /mol_type="genomic DNA"
                     /variety="fokiensis"
                     /db_xref="taxon:39586"
                     /tissue_type="leaf"
     gene            <1..>1333
                     /gene="rbcL"
     CDS             <1..>1333
                     /gene="rbcL"
                     /EC_number="4.1.1.39"
                     /codon_start=2
                     /transl_table=11
                     /product="large subunit of ribulose-1,5-bisphosphate
                     carboxylase/oxygenase"
                     /protein_id="BAA03601.1"
                     /db_xref="GI:286136"
                     /translation="GIGFKAGVKDYRLTHYTPDYETKDTDILAAFRMTPQPGVPAEEA
                     GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVAGEENQYIAYVAYPLDLFEEG
                     SVTNMFTSIVGNVFGFKALRALRSEDSRIPPAYSKTFIGPPHGIQVERDKLNKYGRPL
                     LGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEALFK
                     AQAETGEIKGHYSNATAGTCEEMMKRAVFARESGAPIVMHDYSTGGFTANTSLAFYCR
                     DNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGEREVTL
                     GFVDLLRDDYIEKDRSRGIYFTQDWVSMPGVFPVASGGIHVWHMPALTEIFGDDSVLQ
                     FGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARQGNEIIREAAKWSP"
     misc_feature    44            added by Kei Yura based on the paper 
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
	             /site="I"
     misc_feature    378           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
	             /site="XI"
     misc_feature    387           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
	             /site="XII"
     misc_feature    693           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
	             /site="XV"
     misc_feature    753           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
	             /site="XVI"
     misc_feature    783           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
	             /site="XVII"
ORIGIN      
        1 aggtattgga ttcaaagctg gtgttaaaga ttatcgattg actcactata ctcccgatta
       61 tgagaccaag gatactgata ttttggcagc attccgaatg actccccaac ccggagtacc
      121 ggctgaggaa gctggagctg cagtagctgc ggaatcttct acaggtacgt ggaccactgt
      181 atggacggat ggacttacca gtcttgatcg ttataagggt cgatgctacg atattgaacc
      241 tgttgctggg gaagaaaatc aatatattgc ttatgtagct tatcctctgg acctattcga
      301 agaaggttct gttaccaata tgttcacttc cattgtaggt aacgtgttcg gattcaaagc
      361 attacgcgct ctacgttcgg aagattcgag aattcctccc gcgtattcta agactttcat
      421 cgggccgcct cacggtatcc aggtcgaaag ggataaattg aacaaatatg gtcgtccttt
      481 gttgggatgt acgattaaac ccaaattggg tttatctgct aagaattatg gtagagctgt
      541 ttatgaatgt cttcgtggtg ggcttgattt taccaaagat gatgagaacg tgaattctca
      601 accattcatg cgttggagag atcgtttctt gttcgtagca gaagctcttt ttaaagctca
      661 agctgaaacc ggcgagatta agggacatta ctcgaatgct actgcaggta catgtgaaga
      721 aatgatgaaa agagcagtat ttgctaggga atcgggcgca cctattgtca tgcatgatta
      781 ttcgacggga ggctttactg caaatactag cttggctttt tattgtcgag ataatggtct
      841 acttctccac attcaccgtg caatgcatgc cgttatcgat aggcaaagga atcacggtat
      901 acacttccgt gtattggcta aagcattgcg tatgtctggt ggagatcata ttcattccgg
      961 tactgtagtg ggtaaacttg aaggggaacg agaagtaact ttgggttttg tcgatttact
     1021 ccgtgatgac tatatcgaaa aagaccgaag tcgcggtatc tatttcactc aggattgggt
     1081 atccatgccg ggtgtatttc ctgtagcttc cggaggtatc catgtttggc atatgcccgc
     1141 tctaacggaa atttttgggg atgattctgt attacagttt ggtggaggga ccttgggaca
     1201 cccttgggga aatgcacctg gtgctgtagc taaccgagtt gctttagagg cttgtgtaca
     1261 ggctcgtaat gagggacgtg atcttgctcg tcaaggtaat gagattattc gcgaagctgc
     1321 taaatggagt cct
//
LOCUS       LCUCPRBCL               1765 bp    DNA     linear   PLN 15-DEC-1994
DEFINITION  Lycopodium digitatum chloroplast ribulosebisphosphate carboxylase
            (rbcL) gene, complete cds.
ACCESSION   L11055
VERSION     L11055.1  GI:308870
KEYWORDS    ribulose bisphosphate carboxylase.
SOURCE      chloroplast Lycopodium digitatum
  ORGANISM  Lycopodium digitatum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Lycopodiophyta; Lycopodiopsida; Lycopodiales; Lycopodiaceae;
            Lycopodium.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Manhart,J.R.
  TITLE     Phylogenetic analysis of green plant rbcL sequences
  JOURNAL   Mol. Phylogenet. Evol. 3 (2), 114-127 (1994)
   PUBMED   8075831
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Calie,P.J. and Manhart,J.R.
  TITLE     Extensive sequence divergence in the 3' inverted repeat of the
            chloroplast rbcL gene in non-flowering land plants and algae
  JOURNAL   Gene 146 (2), 251-256 (1994)
   PUBMED   8076827
COMMENT     Original source text: Chloroplast Lycopodium digitatum DNA.
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Lycopodium digitatum"
                     /organelle="plastid:chloroplast"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:13841"
     gene            187..1614
                     /gene="rbcL"
     CDS             187..1614
                     /gene="rbcL"
                     /codon_start=1
                     /product="ribulosebisphosphate carboxylase"
                     /protein_id="AAA57241.1"
                     /db_xref="GI:308871"
                     /translation="MSPQTETKTSVGFKAGVRDYRLTHYTPDYKTKETDILAAFRMTP
                     QLGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYEIEPVAGEKNQYIAYVA
                     YPLDLFEEGSVTNLFTSIVGNVFGFKALRALRLEDLRIPPAYSKTFMGPPHGIQVERD
                     KLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRF
                     LFVAEALYKAQAETGEIKGHYLNATAGTYEEMLKRAHCAKELGVPIVMHDYLTGGFTA
                     NTSLAHYCRDNGPLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGK
                     LEGERQITLGFVDLLRDDYIEKDRSRGIYFTQDWVSMPGVSPVASGGIHVWHMPALTE
                     IFGDDSVSQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREACK
                     WSAELAAACEVWKEIKFEFEAVDTL"
     stem_loop       1635..1705
     misc_feature    256           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="I"
     misc_feature    1052          added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="XX"
     misc_feature    1310          added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="XXVIII"
     misc_feature    1385          added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="XXX"
ORIGIN      
        1 gttgcatcac atatcaaaaa caatatacaa tgataatgtt ttactatgaa gagatgtcta
       61 ttcctaagat agtcaagtcc attaagacgg attctctgtt tcgtaagaaa tttatataaa
      121 atatctcatt tgtcgagcag acctcatcct tgcaagagtt attaattgaa ttgtagggag
      181 ggacctatgt caccacaaac ggagactaaa acaagtgttg gattcaaagc tggcgttagg
      241 gattacagat taactcatta cactcctgat tataagacca aagaaaccga tattctggca
      301 gcatttcgaa tgactcctca acttggagta ccacccgagg aagcgggagc cgcagtagct
      361 gctgaatctt ccactggtac atggactact gtttggaccg atggacttac cagtctcgat
      421 cgctacaaag gtcggtgcta tgaaattgaa cctgttgctg gagaaaaaaa tcaatatatt
      481 gcttatgtag cttatcctct ggatctgttt gaggaaggtt ccgttactaa cttgttcact
      541 tccattgtag gtaatgtatt tggattcaaa gccttacgag ctttacgttt agaagatttg
      601 cgaattcctc ctgcttattc caaaactttc atgggtccgc cccatggtat ccaagtcgaa
      661 agagacaaat tgaacaaata tggccgtcct ttattaggat gtactattaa accaaaatta
      721 ggtttatccg ctaaaaacta tggtagagct gtttatgaat gtcttcgtgg tggacttgat
      781 ttcactaagg atgatgaaaa cgtgaattct caaccgttta tgcgttggag agaccgtttc
      841 ttattcgtag cagaagctct ttataaagct caagccgaaa caggcgaaat taagggtcat
      901 tacttgaatg ctaccgcggg tacatatgaa gaaatgctta aaagggcaca ttgtgctaaa
      961 gaattaggag tgcctatcgt aatgcatgac tatttgacgg gaggtttcac cgcaaatact
     1021 agtttagccc attattgtcg agacaatggt ccactgcttc acattcaccg cgcgatgcat
     1081 gcagttattg acagacaaaa gaatcatggt attcacttcc gtgtattagc taaagcatta
     1141 cgtatgtctg gtggagatca catacactcc ggtactgtag taggtaaact cgaaggagaa
     1201 cgccaaataa ctttaggttt tgttgatcta cttcgtgatg actatatcga gaaggaccga
     1261 agccgtggta tttatttcac tcaagattgg gtatctatgc ctggtgtttc gcccgtagct
     1321 tcgggaggta ttcatgtctg gcacatgcct gctctgactg aaatctttgg agatgattct
     1381 gtatcacaat tcggtggggg aactttggga cacccttggg ggaatgcacc cggtgcagta
     1441 gcaaaccgag ttgctttaga agcttgtgta caggctcgta atgaaggacg cgatcttgct
     1501 cgtgagggta atgagattat tcgtgaagct tgtaagtgga gtgctgaatt agctgccgct
     1561 tgtgaagtct ggaaagaaat caagtttgaa tttgaagcag ttgacacttt gtaattcagt
     1621 tagttccatc agtttattcc tctacttctg ttttgcttca attcctccga ataaggaatt
     1681 gaagcgaaac aaaagtagag gaatattttt gtccgtaaag aaatcgataa atccagcggc
     1741 ttgggagaaa ttacaaaaaa accta
//
LOCUS       APNCPRBCLB              1466 bp    mRNA    linear   PLN 28-APR-2001
DEFINITION  Anthoceros formosae chloroplast mRNA for rbcL, complete cds.
ACCESSION   D43696
VERSION     D43696.1  GI:1389563
KEYWORDS    rbcL; large subunit of ribulosebisphosphate carboxylase.
SOURCE      chloroplast Anthoceros formosae
  ORGANISM  Anthoceros formosae
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta;
            Anthocerotophyta; Anthocerotopsida; Anthocerotidae; Anthocerotales;
            Anthocerotaceae; Anthoceros.
REFERENCE   1  (bases 1 to 1466)
  AUTHORS   Yoshinaga,K., Iinuma,H., Masuzawa,T. and Uedal,K.
  TITLE     Extensive RNA editing of U to C in addition to C to U substitution
            in the rbcL transcripts of hornwort chloroplasts and the origin of
            RNA editing in green plants
  JOURNAL   Nucleic Acids Res. 24 (6), 1008-1014 (1996)
   PUBMED   8604330
REFERENCE   2  (bases 1 to 1466)
  AUTHORS   Yoshinaga,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-1994) Koichi Yoshinaga, Shizuoka University,
            Faculty of Science; Oya 836, Shizuoka, Shizuoka 422, Japan
            (E-mail:sckyosi@sci.shizuoka.ac.jp, Tel:054-238-4760,
            Fax:054-237-3384)
FEATURES             Location/Qualifiers
     source          1..1466
                     /organism="Anthoceros formosae"
                     /organelle="plastid:chloroplast"
                     /mol_type="mRNA"
                     /db_xref="taxon:48387"
     CDS             27..1454
                     /codon_start=1
                     /transl_table=11
                     /product="rbcL"
                     /protein_id="BAA07798.1"
                     /db_xref="GI:1389564"
                     /translation="MSPQTETKAGVGFKAGVKDYRLTYYTPDYETKDTDILAAFRMTP
                     QPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVAGEENQYIAYVA
                     YPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSKTFQGPPHGIQVERD
                     KLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRF
                     LFVAEAIFKSQAETGEIKGHYLNATAGTCEEMMKRAHFARELGMPIVMHDYLTGGFTA
                     NTTLARYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHIHSGTVVGK
                     LEGEREVTLGFVDLLRDDYIEKDRSRGIYFTQDWVSMPGVLPVASGGIHVWHMPALTE
                     IFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNDIIREASK
                     WSPELAAACEVWKEIKFVFETIDTL"
     misc_feature    96            added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="I"
     misc_feature    145           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="II"
     misc_feature    147           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="U to C editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="III"
     misc_feature    159           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="U to C editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="IV"
     misc_feature    328           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="V"
     misc_feature    336           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="U to C editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="VII"
     misc_feature    424           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="X"
     misc_feature    439           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /site="XII"
     misc_feature    511           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /site="XIII"
     misc_feature    703           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /site="XIV"
     misc_feature    850           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="U to C editing on mRNA"
                     /site="XVIII"
     misc_feature    928           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /site="XXI"
     misc_feature    929           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /site="XXI"
     misc_feature    967           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /site="XXII"
     misc_feature    979           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /site="XXIII"
     misc_feature    1008          added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /site="XXIV"
     misc_feature    1041          added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="U to C editing on mRNA"
                     /site="XXV"
     misc_feature    1072          added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /site="XXVI"
     misc_feature    1074          added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="U to C editing on mRNA"
                     /site="XXVII"
     misc_feature    1153          added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="U to C editing on mRNA"
                     /site="XXIX"
ORIGIN      
        1 attaattgag ttgtaaggag ggacctatgt caccacaaac ggagactaaa gcaggtgttg
       61 gatttaaagc tggtgttaaa gattatagat taacctatta tacccctgat tacgagacca
      121 aggatactga tattttggca gcgtttcgaa tgactcctca accaggggtg ccacctgaag
      181 aagcaggagc cgcagtagct gctgaatctt caactggtac atggactact gtttggaccg
      241 atggacttac cagccttgac cgttacaaag gtcgatgcta tgacattgaa cctgttgctg
      301 gagaggaaaa tcaatatatt gcttatgttg cttatccttt agatttgttt gaggagggtt
      361 ctgttaccaa catgttcact tccattgtag gtaatgtttt tggatttaaa gctttacgag
      421 ctttacgtct agaagattta cgaattccac ctgcttattc caaaaccttt caaggtccac
      481 ctcatggtat tcaagttgaa agagataaat tgaataaata tggtcgtcct ttattaggat
      541 gtaccattaa accaaagtta ggtttatctg ccaaaaacta tggtagagct gtatatgaat
      601 gtcttcgtgg tggacttgat ttcaccaaag atgacgaaaa tgttaattct caacctttta
      661 tgcgttggag agatcgtttt ctattcgtag cagaagctat ttttaaatct caagctgaaa
      721 caggggagat taaagggcat tacttaaatg ccactgcagg tacatgtgag gaaatgatga
      781 aaagggcaca ttttgctaga gaattaggaa tgcctatcgt aatgcatgat tatttgacag
      841 gaggttttac tgcaaatacg accctggctc gttattgtag agacaatggt ttacttcttc
      901 atattcatcg tgccatgcat gcagttattg acagacaaag aaatcatggt attcactttc
      961 gtgtattagc taaagcatta cgtatgtccg ggggagatca tattcattca ggtacagtag
     1021 taggtaaatt agagggagaa cgtgaagtaa ctttaggttt tgtggattta cttcgtgacg
     1081 attatattga aaaagataga agtcgtggga tatattttac tcaagactgg gtctctatgc
     1141 ctggtgtttt gcccgtggct tcaggtggta ttcatgtttg gcatatgcca gctttaactg
     1201 agattttcgg agatgattcc gtactacagt ttggcggggg aactctagga cacccttggg
     1261 gaaatgcacc tggtgcagta gctaatcgag ttgctttaga agcttgtgtg caagctcgta
     1321 atgaaggacg tgatcttgct cgcgagggta atgatattat ccgtgaagct agtaaatgga
     1381 gtcctgaatt agcagctgct tgtgaagtat ggaaagaaat taaattcgtt tttgagacga
     1441 ttgatactct ataattcatt tatttt
//
LOCUS       SGPCPRBCL               1418 bp    DNA     linear   PLN 22-NOV-1994
DEFINITION  Sphagnum palustre chloroplast ribulosebisphosphate carboxylase
            (rbcL) gene, partial cds.
ACCESSION   L13485
VERSION     L13485.1  GI:310371
KEYWORDS    ribulosebisphosphate carboxylase.
SOURCE      chloroplast Sphagnum palustre
  ORGANISM  Sphagnum palustre
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
            Moss Superclass II; Sphagnopsida; Sphagnales; Sphagnaceae;
            Sphagnum.
REFERENCE   1  (bases 1 to 1418)
  AUTHORS   Manhart,J.R.
  TITLE     Phylogenetic analysis of green plant rbcL sequences
  JOURNAL   Mol. Phylogenet. Evol. 3 (2), 114-127 (1994)
   PUBMED   8075831
COMMENT     Original source text: Chloroplast Sphagnum palustre (organelle
            Chloroplast Sphagnum palustre) DNA.
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Sphagnum palustre"
                     /organelle="plastid:chloroplast"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:13805"
     gene            1..1402
                     /gene="rbcL"
     CDS             <1..1402
                     /gene="rbcL"
                     /codon_start=2
                     /product="ribulosebisphosphate carboxylase"
                     /protein_id="AAA53414.1"
                     /db_xref="GI:310372"
                     /translation="GSGFKAGVKDYRLTYYTPEYAVKDTDILAAFRMTPQPGVPPEEA
                     GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVAGEENQYIAYVAYPSDLFEEG
                     SVTNLFTSIVGNVFGFKALRALRLEDLRIPPSYTKTFQGPPHGIQVERDKLNKYGRPL
                     LGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIYK
                     SQAETGEIKGHYLNATAGTCEEMMKRAAFARELGAPIIMHDYLTGGFTANTTLAHYCR
                     DNGLLLHIHRAMHAVIDRQKIHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGERQVTL
                     GFVDLLRDDYIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQ
                     FGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARQGNDIIREAAKWSPELAAAC
                     EVWKEIKFEFDTIDTV"
     misc_feature    288           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="VIII"
ORIGIN      
        1 aggtagtgga tttaaagctg gtgttaaaga ttacaggttg acttattaca ccccggagta
       61 tgctgtcaaa gataccgaca ttttggcagc atttcgaatg actcctcaac ctggagtacc
      121 acccgaggaa gcaggagctg cagtagctgc ggaatcttcc accggtacat ggactaccgt
      181 ttggaccgat ggacttacca gtcttgatcg ttataagggt cgatgctacg atatcgagcc
      241 tgtagctgga gaagaaaatc aatatattgc ttatgttgct tatccttcag atttattcga
      301 agaaggttct gttaccaact tatttacttc tattgtaggt aatgtttttg gattcaaagc
      361 tctacgagct ctacgtctag aggatttacg gattccccca tcttatacta aaactttcca
      421 aggtccacct catggtatcc aagttgagag agataaatta aacaaatatg gtcgtcccct
      481 attgggatgt actattaaac caaaattagg tctatctgct aaaaactatg gcagagcagt
      541 atatgagtgt cttcgtggtg gacttgattt tacgaaagat gatgaaaacg tcaattctca
      601 acctttcatg cgttggagag atcgcttcct atttgtggca gaagctattt ataaatccca
      661 ggctgaaacg ggtgaaatca agggtcatta cttgaatgct actgcaggta catgcgaaga
      721 aatgatgaag agagcggcat ttgctagaga gttaggagca cctatcatca tgcatgacta
      781 tttgacaggt ggtttcactg caaatactac tttggctcat tattgccgag ataatggtct
      841 acttcttcat attcatcgcg caatgcatgc agttattgac cgacaaaaaa ttcatggtat
      901 gcacttccgt gtattagcta aagcattacg tttatctggt ggggatcata tccacgccgg
      961 tactgtagtg ggtaaacttg aaggggaacg tcaagtaact ctgggatttg ttgatctact
     1021 tcgtgatgac tatatcgaaa aagaccgaag ccgtggtatt tatttcaccc aagactgggt
     1081 ttctttacca ggtgttttac ctgtagcttc gggaggtatt catgtttggc atatgcctgc
     1141 tctaactgaa atttttgggg atgattccgt attacagttt ggtggaggaa ctctgggaca
     1201 tccttggggg aacgcacctg gtgcagttgc taatcgagtt gctctggaag cctgtgtaca
     1261 agcccgtaat gagggacgtg atcttgctcg tcaaggtaat gatattattc gcgaagctgc
     1321 caagtggagt cccgaactag ccgctgcttg tgaagtatgg aaagaaatca aatttgagtt
     1381 tgacacgatc gatactgttt gatatagttt atatttca
//
LOCUS       BZZCPRBCL               1624 bp    DNA     linear   PLN 15-DEC-1994
DEFINITION  Bazzania trilobata chloroplast ribulosebisphosphate carboxylase
            (rbcL) gene, complete cds.
ACCESSION   L11056
VERSION     L11056.1  GI:304306
KEYWORDS    ribulose bisphosphate carboxylase.
SOURCE      chloroplast Bazzania trilobata
  ORGANISM  Bazzania trilobata
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta;
            Marchantiophyta; Superclass IV; Jungermanniopsida; Jungermanniidae;
            Jungermannianae; Jungermanniales; Lophocoleineae; Lepidoziaceae;
            Bazzania.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Manhart,J.R.
  TITLE     Phylogenetic analysis of green plant rbcL sequences
  JOURNAL   Mol. Phylogenet. Evol. 3 (2), 114-127 (1994)
   PUBMED   8075831
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Calie,P.J. and Manhart,J.R.
  TITLE     Extensive sequence divergence in the 3' inverted repeat of the
            chloroplast rbcL gene in non-flowering land plants and algae
  JOURNAL   Gene 146 (2), 251-256 (1994)
   PUBMED   8076827
COMMENT     Original source text: Chloroplast Bazzania trilobata DNA.
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Bazzania trilobata"
                     /organelle="plastid:chloroplast"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:13808"
     gene            134..1561
                     /gene="rbcL"
     CDS             134..1561
                     /gene="rbcL"
                     /codon_start=1
                     /product="ribulosebisphosphate carboxylase"
                     /protein_id="AAA57238.1"
                     /db_xref="GI:304307"
                     /translation="MSPQTETKTGVGFKAGVKDYRLTYYTPEYETKETDILAAFRMTP
                     QPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVAGEENQYIAYVA
                     HPLDLFEEGSVTNLFTSIVGNVFGFKASRALRLEDLRIPPSYVKTFQGPPHGIQVERD
                     KLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRF
                     LFVAEALFKSQAETGEIKGHYLNATAGTSEEMMKRAACARELGVPIVMHDYLTGGFTA
                     NTSLAHHCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVSAKALRLSGGDHIHAGTVVGK
                     LEGERDVTLGFVDLLRDDYIEKDRSRGVYFTQDWVSLPGVLPVASGGIHVWHMPALTE
                     IFGDDSVLQFGGGTLGHPWGNAPGAVANRVASEACVQARNEGRDLAREGNEIIREAAK
                     WSPDLAAACEVWKEIKFEYETMNTL"
     stem_loop       1562..1616
     misc_feature    440           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="VI"
     misc_feature    522           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="IX"
     misc_feature    980           added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="XIX"
     misc_feature    1074          added by Kei Yura based on the paper
                     /gene="rbcL"
                     /note="C to U editing on mRNA"
                     /paper="Freyer et al. (1997) PNAS, 94, 6285-6290.
                     /site="XXII"
ORIGIN      
        1 tggtgtttat tttctatgag tattctcaat ttacaatggt aaacttcttt tgggtaataa
       61 gtttttgaag attccactat cgagcagacc tcatctttgc tagagtataa attggatttg
      121 tagggaggga cttatgtcac cacaaacgga gactaaaaca ggtgttggat tcaaagctgg
      181 tgttaaagat tatagattaa cctattatac gcctgaatat gagaccaaag agacagatat
      241 tttggcagca tttcgtatga ctccccaacc gggagtacca cctgaagaag caggagcggc
      301 agtagctgct gaatcttcaa ccggtacgtg gaccacggtt tggaccgatg ggcttacaag
      361 tctcgatcgt tacaaaggtc gatgctatga catcgaacct gttgccggtg aagaaaatca
      421 atatattgct tatgtagctc atcccttaga tctattcgaa gaaggttctg ttacgaatct
      481 tttcacttct attgtaggta atgtgttcgg attcaaagct tcaagagctt tacgtcttga
      541 agatttacgt attcctccgt cttatgtaaa aacttttcaa ggtccacctc atggtatcca
      601 agttgaaaga gataaattaa ataaatatgg tcgtccctta ttgggttgta cgattaaacc
      661 aaaattgggt ttatctgcta aaaattatgg tagagcggta tacgaatgtc tccgtggtgg
      721 gcttgatttt acgaaagatg atgaaaatgt gaattcccaa ccatttatgc gttggagaga
      781 tcgtttcttg ttcgtagcag aagctctttt caaatctcaa gctgaaactg gtgaaattaa
      841 aggacattat ttaaacgcta ctgcaggtac ttccgaagaa atgatgaaac gagctgcctg
      901 tgctagagaa ttgggtgtac caattgttat gcatgattat cttacaggcg gattcactgc
      961 aaatactagt ttagctcatc attgtcgaga taacggtcta cttcttcaca tccatcgtgc
     1021 gatgcatgcc gttattgata gacaaaaaaa tcatggtatg catttccgtg tatcagccaa
     1081 agcattacgt ttatccggtg gagatcatat tcatgccggt actgttgtgg gtaaactaga
     1141 gggagaacgt gacgtaactc tgggctttgt ggatttatta cgtgatgatt atatcgaaaa
     1201 agatagaagt cgtggtgttt acttcacaca agattgggtc tccctacctg gtgtactccc
     1261 tgtagcatct ggtggtattc atgtttggca tatgccagcc ctaaccgaaa ttttcgggga
     1321 tgattctgta ttacagttcg gtggtggaac tttgggacac ccttggggaa atgcacctgg
     1381 tgcagtggct aaccgagtcg cttcagaagc ttgtgtacaa gcacgtaatg aaggacgcga
     1441 tcttgcccgt gaaggtaatg agattattcg tgaggccgct aaatggagcc ctgatttggc
     1501 tgctgcttgt gaagtttgga aagaaattaa atttgaatat gaaacaatga atactttata
     1561 aatttatcat ttttttcttt caccccggaa ctggggtgaa gaaaaaaatg ataaattcag
     1621 ttac
//
