1djnA

trimethylamine dehydrogenase [1djn] A chain

Surroundedness Factor
3D Structure
Raw data

Backbone structure of the protein. White subunit is in consideration.
Red region has high SF value. Space filling model is the N- and C-teminal residues.

Raw SF value of each residue

#	aa	SF
1	Ala	0.00
2	Arg	0.00
3	Asp	0.00
4	Pro	0.00
5	Lys	0.00
6	His	0.00
7	Asp	0.00
8	Ile	0.00
9	Leu	0.00
10	Phe	0.00
11	Glu	0.00
12	Pro	0.00
13	Ile	0.00
14	Gln	0.00
15	Ile	0.00
16	Gly	0.00
17	Pro	0.00
18	Lys	0.00
19	Thr	0.00
20	Leu	0.00
21	Arg	0.00
22	Asn	0.00
23	Arg	0.00
24	Phe	0.00
25	Tyr	0.00
26	Gln	0.00
27	Val	0.00
28	Pro	0.00
29	His	0.00
30	Cys	0.01
31	Ile	0.03
32	Gly	0.04
33	Ala	0.07
34	Gly	0.12
35	Ser	0.16
36	Asp	0.20
37	Lys	0.27
38	Pro	0.27
39	Gly	0.23
40	Phe	0.21
41	Gln	0.18
42	Ser	0.12
43	Ala	0.09
44	His	0.09
45	Arg	0.07
46	Ser	0.04
47	Val	0.04
48	Lys	0.04
49	Ala	0.03
50	Glu	0.02
51	Gly	0.01
52	Gly	0.01
53	Trp	0.00
54	Ala	0.00
55	Ala	0.00
56	Leu	0.00
57	Asn	0.00
58	Thr	0.00
59	Glu	0.00
60	Tyr	0.01
61	Cys	0.01
62	Ser	0.03
63	Ile	0.08
64	Asn	0.12
65	Pro	0.13
66	Glu	0.14
67	Ser	0.13
68	Asp	0.14
69	Asp	0.19
70	Thr	0.21
71	His	0.22
72	Arg	0.20
73	Leu	0.16
74	Ser	0.07
75	Ala	0.05
76	Arg	0.05
77	Ile	0.08
78	Trp	0.10
79	Asp	0.15
80	Glu	0.18
81	Gly	0.17
82	Asp	0.18
83	Val	0.20
84	Arg	0.16
85	Asn	0.15
86	Leu	0.17
87	Lys	0.15
88	Ala	0.11
89	Met	0.11
90	Thr	0.12
91	Asp	0.07
92	Glu	0.06
93	Val	0.06
94	His	0.05
95	Lys	0.02
96	Tyr	0.01
97	Gly	0.01
98	Ala	0.00
99	Leu	0.00
100	Ala	0.00
101	Gly	0.00
102	Val	0.00
103	Glu	0.00
104	Leu	0.00
105	Trp	0.00
106	Tyr	0.00
107	Gly	0.02
108	Gly	0.03
109	Ala	0.03
110	His	0.07
111	Ala	0.13
112	Pro	0.27
113	Asn	0.47
114	Met	0.68
115	Glu	0.92
116	Ser	1.02
117	Arg	0.99
118	Ala	0.82
119	Thr	0.64
120	Pro	0.37
121	Arg	0.20
122	Gly	0.11
123	Pro	0.17
124	Ser	0.26
125	Gln	0.39
126	Tyr	0.45
127	Ala	0.51
128	Ser	0.46
129	Glu	0.42
130	Phe	0.50
131	Glu	0.69
132	Thr	0.70
133	Leu	0.76
134	Ser	0.76
135	Tyr	0.64
136	Cys	0.46
137	Lys	0.39
138	Glu	0.34
139	Met	0.29
140	Asp	0.23
141	Leu	0.20
142	Ser	0.17
143	Asp	0.11
144	Ile	0.10
145	Ala	0.06
146	Gln	0.02
147	Val	0.02
148	Gln	0.02
149	Gln	0.01
150	Phe	0.00
151	Tyr	0.00
152	Val	0.00
153	Asp	0.00
154	Ala	0.00
155	Ala	0.00
156	Lys	0.00
157	Arg	0.00
158	Ser	0.00
159	Arg	0.00
160	Asp	0.00
161	Ala	0.00
162	Gly	0.00
163	Phe	0.00
164	Asp	0.00
165	Ile	0.00
166	Val	0.00
167	Tyr	0.00
168	Val	0.00
169	Tyr	0.00
170	Gly	0.00
171	Ala	0.00
172	His	0.00
173	Ser	0.00
174	Tyr	0.00
175	Leu	0.00
176	Pro	0.01
177	Leu	0.00
178	Gln	0.00
179	Phe	0.01
180	Leu	0.03
181	Asn	0.07
182	Pro	0.10
183	Tyr	0.11
184	Tyr	0.14
185	Asn	0.12
186	Lys	0.08
187	Arg	0.05
188	Thr	0.03
189	Asp	0.00
190	Lys	0.00
191	Tyr	0.00
192	Gly	0.00
193	Gly	0.00
194	Ser	0.00
195	Leu	0.00
196	Glu	0.00
197	Asn	0.00
198	Arg	0.00
199	Ala	0.00
200	Arg	0.00
201	Phe	0.00
202	Trp	0.00
203	Leu	0.00
204	Glu	0.00
205	Thr	0.00
206	Leu	0.00
207	Glu	0.00
208	Lys	0.00
209	Val	0.00
210	Lys	0.00
211	His	0.00
212	Ala	0.00
213	Val	0.00
214	Gly	0.00
215	Ser	0.00
216	Asp	0.00
217	Cys	0.00
218	Ala	0.00
219	Ile	0.00
220	Ala	0.00
221	Thr	0.00
222	Arg	0.00
223	Phe	0.01
224	Gly	0.04
225	Val	0.06
226	Asp	0.14
227	Thr	0.26
228	Val	0.39
229	Tyr	0.43
230	Gly	0.46
231	Pro	0.41
232	Gly	0.31
233	Gln	0.23
234	Ile	0.18
235	Glu	0.17
236	Ala	0.16
237	Glu	0.15
238	Val	0.12
239	Asp	0.09
240	Gly	0.06
241	Gln	0.03
242	Lys	0.02
243	Phe	0.01
244	Val	0.00
245	Glu	0.00
246	Met	0.00
247	Ala	0.00
248	Asp	0.00
249	Ser	0.00
250	Leu	0.00
251	Val	0.00
252	Asp	0.00
253	Met	0.00
254	Trp	0.00
255	Asp	0.00
256	Ile	0.02
257	Thr	0.03
258	Ile	0.04
259	Gly	0.04
260	Asp	0.06
261	Ile	0.07
262	Ala	0.06
263	Glu	0.06
264	Trp	0.09
265	Gly	0.07
266	Glu	0.06
267	Asp	0.06
268	Ala	0.05
269	Gly	0.03
270	Pro	0.03
271	Ser	0.06
272	Arg	0.08
273	Phe	0.08
274	Tyr	0.08
275	Gln	0.07
276	Gln	0.07
277	Gly	0.07
278	His	0.08
279	Thr	0.12
280	Ile	0.15
281	Pro	0.13
282	Trp	0.11
283	Val	0.11
284	Lys	0.07
285	Leu	0.03
286	Val	0.02
287	Lys	0.02
288	Gln	0.00
289	Val	0.00
290	Ser	0.00
291	Lys	0.00
292	Lys	0.00
293	Pro	0.00
294	Val	0.00
295	Leu	0.00
296	Gly	0.01
297	Val	0.01
298	Gly	0.01
299	Arg	0.01
300	Tyr	0.01
301	Thr	0.00
302	Asp	0.00
303	Pro	0.00
304	Glu	0.00
305	Lys	0.00
306	Met	0.00
307	Ile	0.00
308	Glu	0.00
309	Ile	0.00
310	Val	0.00
311	Thr	0.00
312	Lys	0.00
313	Gly	0.00
314	Tyr	0.00
315	Ala	0.00
316	Asp	0.00
317	Ile	0.00
318	Ile	0.00
319	Gly	0.00
320	Cys	0.00
321	Ala	0.00
322	Arg	0.00
323	Pro	0.00
324	Ser	0.00
325	Ile	0.00
326	Ala	0.00
327	Asp	0.00
328	Pro	0.00
329	Phe	0.00
330	Leu	0.00
331	Pro	0.00
332	Gln	0.00
333	Lys	0.00
334	Val	0.00
335	Glu	0.00
336	Gln	0.00
337	Gly	0.00
338	Arg	0.00
339	Tyr	0.00
340	Asp	0.00
341	Asp	0.00
342	Ile	0.00
343	Arg	0.00
344	Val	0.00
345	Cys	0.00
346	Ile	0.00
347	Gly	0.00
348	Cys	0.01
349	Asn	0.01
350	Val	0.01
351	Cys	0.03
352	Ile	0.06
353	Ser	0.07
354	Arg	0.08
355	Trp	0.14
356	Glu	0.20
357	Ile	0.27
358	Gly	0.36
359	Gly	0.40
360	Pro	0.36
361	Pro	0.31
362	Met	0.21
363	Ile	0.10
364	Cys	0.06
365	Thr	0.04
366	Gln	0.02
367	Asn	0.03
368	Ala	0.04
369	Thr	0.05
370	Ala	0.09
371	Gly	0.11
372	Glu	0.15
373	Glu	0.23
374	Tyr	0.27
375	Arg	0.28
376	Arg	0.29
377	Gly	0.26
378	Trp	0.19
379	His	0.15
380	Pro	0.13
381	Glu	0.12
382	Lys	0.12
383	Phe	0.12
384	Arg	0.11
385	Gln	0.09
386	Thr	0.06
387	Lys	0.04
388	Asn	0.01
389	Lys	0.01
390	Asp	0.00
391	Ser	0.00
392	Val	0.00
393	Leu	0.00
394	Ile	0.00
395	Val	0.00
396	Gly	0.00
397	Ala	0.00
398	Gly	0.00
399	Pro	0.00
400	Ser	0.00
401	Gly	0.00
402	Ser	0.00
403	Glu	0.00
404	Ala	0.00
405	Ala	0.00
406	Arg	0.00
407	Val	0.00
408	Leu	0.01
409	Met	0.01
410	Glu	0.01
411	Ser	0.01
412	Gly	0.01
413	Tyr	0.01
414	Thr	0.00
415	Val	0.00
416	His	0.00
417	Leu	0.00
418	Thr	0.00
419	Asp	0.00
420	Thr	0.00
421	Ala	0.00
422	Glu	0.00
423	Lys	0.00
424	Ile	0.00
425	Gly	0.00
426	Gly	0.00
427	His	0.00
428	Leu	0.00
429	Asn	0.00
430	Gln	0.00
431	Val	0.00
432	Ala	0.00
433	Ala	0.00
434	Leu	0.01
435	Pro	0.01
436	Gly	0.01
437	Leu	0.01
438	Gly	0.01
439	Glu	0.00
440	Trp	0.00
441	Ser	0.00
442	Tyr	0.00
443	His	0.00
444	Arg	0.00
445	Asp	0.00
446	Tyr	0.00
447	Arg	0.00
448	Glu	0.00
449	Thr	0.00
450	Gln	0.00
451	Ile	0.00
452	Thr	0.00
453	Lys	0.00
454	Leu	0.00
455	Leu	0.00
456	Lys	0.00
457	Lys	0.00
458	Asn	0.00
459	Lys	0.00
460	Glu	0.00
461	Ser	0.00
462	Gln	0.00
463	Leu	0.00
464	Ala	0.00
465	Leu	0.00
466	Gly	0.00
467	Gln	0.00
468	Lys	0.00
469	Pro	0.00
470	Met	0.00
471	Thr	0.00
472	Ala	0.00
473	Asp	0.00
474	Asp	0.00
475	Val	0.00
476	Leu	0.00
477	Gln	0.00
478	Tyr	0.00
479	Gly	0.00
480	Ala	0.00
481	Asp	0.00
482	Lys	0.00
483	Val	0.00
484	Ile	0.00
485	Ile	0.00
486	Ala	0.01
487	Thr	0.02
488	Gly	0.03
489	Ala	0.04
490	Arg	0.06
491	Trp	0.05
492	Asn	0.04
493	Thr	0.03
494	Asp	0.06
495	Gly	0.12
496	Thr	0.28
497	Asn	0.41
498	Cys	0.57
499	Leu	0.76
500	Thr	0.79
501	His	0.64
502	Asp	0.51
503	Pro	0.35
504	Ile	0.12
505	Pro	0.02
506	Gly	0.00
507	Ala	0.00
508	Asp	0.00
509	Ala	0.00
510	Ser	0.00
511	Leu	0.00
512	Pro	0.00
513	Asp	0.00
514	Gln	0.00
515	Leu	0.00
516	Thr	0.00
517	Pro	0.00
518	Glu	0.00
519	Gln	0.00
520	Val	0.00
521	Met	0.00
522	Asp	0.00
523	Gly	0.00
524	Lys	0.00
525	Lys	0.00
526	Lys	0.00
527	Ile	0.00
528	Gly	0.00
529	Lys	0.00
530	Arg	0.00
531	Val	0.00
532	Val	0.00
533	Ile	0.01
534	Leu	0.04
535	Asn	0.08
536	Ala	0.12
537	Asp	0.14
538	Thr	0.13
539	Tyr	0.10
540	Phe	0.06
541	Met	0.02
542	Ala	0.01
543	Pro	0.00
544	Ser	0.00
545	Leu	0.00
546	Ala	0.00
547	Glu	0.00
548	Lys	0.00
549	Leu	0.01
550	Ala	0.00
551	Thr	0.00
552	Ala	0.00
553	Gly	0.00
554	His	0.00
555	Glu	0.00
556	Val	0.00
557	Thr	0.00
558	Ile	0.00
559	Val	0.01
560	Ser	0.06
561	Gly	0.11
562	Val	0.12
563	His	0.14
564	Leu	0.16
565	Ala	0.14
566	Asn	0.10
567	Tyr	0.10
568	Met	0.09
569	His	0.05
570	Phe	0.04
571	Thr	0.04
572	Leu	0.05
573	Glu	0.10
574	Tyr	0.17
575	Pro	0.20
576	Asn	0.24
577	Met	0.35
578	Met	0.35
579	Arg	0.32
580	Arg	0.39
581	Leu	0.45
582	His	0.35
583	Glu	0.31
584	Leu	0.28
585	His	0.18
586	Val	0.08
587	Glu	0.06
588	Glu	0.07
589	Leu	0.12
590	Gly	0.11
591	Asp	0.10
592	His	0.09
593	Phe	0.06
594	Cys	0.01
595	Ser	0.00
596	Arg	0.00
597	Ile	0.00
598	Glu	0.00
599	Pro	0.00
600	Gly	0.00
601	Arg	0.00
602	Met	0.00
603	Glu	0.01
604	Ile	0.05
605	Tyr	0.11
606	Asn	0.26
607	Ile	0.37
608	Trp	0.49
609	Gly	0.61
610	Asp	0.81
611	Gly	0.93
612	Ser	1.11
613	Lys	1.16
614	Arg	1.27
615	Thr	1.15
616	Tyr	1.17
617	Arg	1.29
618	Gly	1.39
619	Pro	1.28
620	Gly	1.27
621	Val	1.16
622	Ser	0.87
623	Pro	0.66
624	Arg	0.55
625	Asp	0.46
626	Ala	0.32
627	Asn	0.23
628	Thr	0.18
629	Ser	0.13
630	His	0.08
631	Arg	0.04
632	Trp	0.01
633	Ile	0.00
634	Glu	0.00
635	Phe	0.00
636	Asp	0.00
637	Ser	0.00
638	Leu	0.00
639	Val	0.01
640	Leu	0.02
641	Val	0.07
642	Thr	0.11
643	Gly	0.17
644	Arg	0.23
645	His	0.23
646	Ser	0.21
647	Glu	0.18
648	Cys	0.12
649	Thr	0.07
650	Leu	0.09
651	Trp	0.07
652	Asn	0.06
653	Glu	0.09
654	Leu	0.10
655	Lys	0.07
656	Ala	0.07
657	Arg	0.07
658	Glu	0.04
659	Ser	0.01
660	Glu	0.01
661	Trp	0.00
662	Ala	0.00
663	Glu	0.00
664	Asn	0.00
665	Asp	0.00
666	Ile	0.00
667	Lys	0.00
668	Gly	0.01
669	Ile	0.04
670	Tyr	0.05
671	Leu	0.08
672	Ile	0.11
673	Gly	0.13
674	Asp	0.20
675	Ala	0.32
676	Glu	0.38
677	Ala	0.43
678	Pro	0.44
679	Arg	0.36
680	Leu	0.24
681	Ile	0.20
682	Ala	0.12
683	Asp	0.09
684	Ala	0.10
685	Thr	0.10
686	Phe	0.06
687	Thr	0.05
688	Gly	0.06
689	His	0.05
690	Arg	0.03
691	Val	0.04
692	Ala	0.04
693	Arg	0.03
694	Glu	0.03
695	Ile	0.03
696	Glu	0.03
697	Glu	0.04
698	Ala	0.04
699	Asn	0.09
700	Pro	0.19
701	Gln	0.26
702	Ile	0.31
703	Ala	0.45
704	Ile	0.53
705	Pro	0.59
706	Tyr	0.73
707	Lys	0.85
708	Arg	0.99
709	Glu	1.13
710	Thr	1.34
711	Ile	1.54
712	Ala	1.60
713	Trp	1.51
714	Gly	1.39
715	Thr	1.11
716	Pro	0.80
717	His	0.62
718	Met	0.45
719	Pro	0.36
720	Gly	0.34
721	Gly	0.39
722	Asn	0.51
723	Phe	0.84
724	Lys	1.07
725	Ile	1.55
726	Glu	2.02
727	Tyr	2.43
728	Lys	0.00
729	Val	0.00

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