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class ii histocompatibility antigen, m beta [1hdm] B chain

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• Surroundedness Factor
• 3D Structure
• Raw data

Surroundedness Factor Plot

Backbone structure of the protein. White subunit is in consideration.
Red region has high SF value. Space filling model is the N- and C-teminal residues.

Raw SF value of each residue

#		aa		SF
1		Phe		0.00
2		Val		0.00
3		Ala		1.92
4		His		1.55
5		Val		1.17
6		Glu		0.94
7		Ser		0.78
8		Thr		0.67
9		Cys		0.53
10		Leu		0.48
11		Leu		0.45
12		Asp		0.41
13		Asp		0.37
14		Ala		0.34
15		Gly		0.29
16		Thr		0.26
17		Pro		0.24
18		Lys		0.22
19		Asp		0.22
20		Phe		0.22
21		Thr		0.22
22		Tyr		0.26
23		Cys		0.33
24		Ile		0.47
25		Ser		0.72
26		Phe		0.88
27		Asn		0.88
28		Lys		0.81
29		Asp		0.65
30		Leu		0.36
31		Leu		0.15
32		Thr		0.07
33		Cys		0.04
34		Trp		0.02
35		Asp		0.01
36		Pro		0.00
37		Glu		0.00
38		Glu		0.00
39		Asn		0.01
40		Lys		0.01
41		Met		0.01
42		Ala		0.01
43		Pro		0.02
44		Cys		0.05
45		Asn		0.12
46		Ser		0.15
47		Leu		0.16
48		Ala		0.20
49		Asn		0.22
50		Val		0.17
51		Leu		0.16
52		Ser		0.20
53		Gln		0.20
54		His		0.16
55		Leu		0.16
56		Asn		0.17
57		Gln		0.13
58		Lys		0.12
59		Asp		0.16
60		Thr		0.14
61		Leu		0.12
62		Met		0.15
63		Gln		0.12
64		Arg		0.07
65		Leu		0.08
66		Asn		0.07
67		Gly		0.04
68		Leu		0.08
69		Gln		0.13
70		Asn		0.13
71		Cys		0.17
72		Ala		0.30
73		Thr		0.39
74		His		0.38
75		Thr		0.50
76		Gln		0.61
77		Pro		0.58
78		Phe		0.51
79		Trp		0.56
80		Gly		0.56
81		Ser		0.50
82		Leu		0.45
83		Thr		0.45
84		Asn		0.38
85		Arg		0.25
86		Thr		0.15
87		Arg		0.10
88		Pro		0.07
89		Pro		0.06
90		Ser		0.09
91		Val		0.11
92		Gln		0.15
93		Val		0.17
94		Ala		0.20
95		Lys		0.20
96		Thr		0.19
97		Thr		0.15
98		Pro		0.12
99		Phe		0.06
100		Asn		0.02
101		Thr		0.01
102		Arg		0.00
103		Glu		0.00
104		Pro		0.01
105		Val		0.02
106		Met		0.05
107		Leu		0.06
108		Ala		0.10
109		Cys		0.11
110		Tyr		0.13
111		Val		0.15
112		Trp		0.15
113		Gly		0.14
114		Phe		0.16
115		Tyr		0.15
116		Pro		0.13
117		Ala		0.11
118		Glu		0.08
119		Val		0.04
120		Thr		0.01
121		Ile		0.00
122		Thr		0.00
123		Trp		0.00
124		Arg		0.00
125		Lys		0.00
126		Asn		0.00
127		Gly		0.00
128		Lys		0.00
129		Leu		0.00
130		Val		0.00
131		Met		0.00
132		His		0.00
133		Ser		0.00
134		Ser		0.00
135		Ala		0.00
136		His		0.01
137		Lys		0.03
138		Thr		0.14
139		Ala		0.31
140		Gln		0.57
141		Pro		0.97
142		Asn		1.26
143		Gly		1.31
144		Asp		1.22
145		Trp		1.01
146		Thr		0.65
147		Tyr		0.37
148		Gln		0.22
149		Thr		0.14
150		Leu		0.09
151		Ser		0.04
152		His		0.02
153		Leu		0.00
154		Ala		0.00
155		Leu		0.00
156		Thr		0.00
157		Pro		0.00
158		Ser		0.00
159		Tyr		0.00
160		Gly		0.00
161		Asp		0.00
162		Thr		0.00
163		Tyr		0.00
164		Thr		0.00
165		Cys		0.00
166		Val		0.00
167		Val		0.00
168		Glu		0.01
169		His		0.01
170		Ile		0.01
171		Gly		0.01
172		Ala		0.01
173		Pro		0.00
174		Glu		0.00
175		Pro		0.00
176		Ile		0.00
177		Leu		0.00
178		Arg		0.00
179		Asp		0.01
180		Trp		0.01
181		Thr		0.01
182		Pro		0.00
183		Gly		0.00

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