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variant surface glycoprotein (n-terminal domain) [1vsg] A chain

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• Surroundedness Factor
• 3D Structure
• Raw data

Surroundedness Factor Plot

Backbone structure of the protein. White subunit is in consideration.
Red region has high SF value. Space filling model is the N- and C-teminal residues.

Raw SF value of each residue

#		aa		SF
1		Ala		0.00
2		Ala		0.00
3		Glu		0.02
4		Lys		0.02
5		Gly		0.02
6		Phe		0.01
7		Lys		0.01
8		Gln		0.00
9		Ala		0.00
10		Phe		0.00
11		Trp		0.00
12		Gln		0.00
13		Pro		0.00
14		Leu		0.00
15		Cys		0.01
16		Gln		0.02
17		Val		0.02
18		Ser		0.02
19		Glu		0.03
20		Glu		0.06
21		Leu		0.06
22		Asp		0.07
23		Asp		0.13
24		Gln		0.16
25		Pro		0.15
26		Lys		0.18
27		Gly		0.24
28		Ala		0.22
29		Leu		0.21
30		Phe		0.27
31		Thr		0.33
32		Leu		0.28
33		Gln		0.28
34		Ala		0.35
35		Ala		0.33
36		Ala		0.25
37		Ser		0.26
38		Lys		0.28
39		Ile		0.20
40		Gln		0.15
41		Lys		0.17
42		Met		0.14
43		Arg		0.08
44		Asp		0.08
45		Ala		0.09
46		Ala		0.06
47		Leu		0.05
48		Arg		0.08
49		Ala		0.07
50		Ser		0.05
51		Ile		0.10
52		Tyr		0.14
53		Ala		0.12
54		Glu		0.16
55		Ile		0.25
56		Asn		0.34
57		His		0.39
58		Gly		0.42
59		Thr		0.40
60		Asn		0.36
61		Arg		0.28
62		Ala		0.20
63		Lys		0.17
64		Ala		0.20
65		Ala		0.18
66		Val		0.14
67		Ile		0.15
68		Val		0.20
69		Ala		0.18
70		Asn		0.17
71		His		0.22
72		Tyr		0.25
73		Ala		0.21
74		Met		0.23
75		Lys		0.31
76		Ala		0.29
77		Asp		0.26
78		Ser		0.34
79		Gly		0.41
80		Leu		0.34
81		Glu		0.37
82		Ala		0.48
83		Leu		0.48
84		Lys		0.41
85		Gln		0.40
86		Thr		0.46
87		Leu		0.46
88		Ser		0.41
89		Ser		0.43
90		Gln		0.58
91		Glu		0.58
92		Val		0.48
93		Thr		0.52
94		Ala		0.63
95		Thr		0.54
96		Ala		0.45
97		Thr		0.50
98		Ala		0.57
99		Ser		0.46
100		Tyr		0.42
101		Leu		0.50
102		Lys		0.52
103		Gly		0.41
104		Arg		0.40
105		Ile		0.48
106		Asp		0.43
107		Glu		0.35
108		Tyr		0.37
109		Leu		0.43
110		Asn		0.33
111		Leu		0.28
112		Leu		0.35
113		Leu		0.40
114		Gln		0.37
115		Thr		0.48
116		Lys		0.53
117		Glu		0.46
118		Ser		0.35
119		Gly		0.30
120		Thr		0.19
121		Ser		0.13
122		Gly		0.11
123		Cys		0.10
124		Met		0.06
125		Met		0.02
126		Asp		0.00
127		Thr		0.00
128		Ser		0.00
129		Gly		0.00
130		Thr		0.01
131		Asn		0.01
132		Thr		0.01
133		Val		0.01
134		Thr		0.01
135		Lys		0.00
136		Ala		0.00
137		Gly		0.00
138		Gly		0.00
139		Thr		0.00
140		Ile		0.00
141		Gly		0.00
142		Gly		0.00
143		Val		0.01
144		Pro		0.02
145		Cys		0.05
146		Lys		0.14
147		Leu		0.25
148		Gln		0.32
149		Leu		0.44
150		Ser		0.50
151		Pro		0.46
152		Ile		0.40
153		Gln		0.33
154		Pro		0.19
155		Lys		0.09
156		Arg		0.04
157		Pro		0.00
158		Ala		0.00
159		Ala		0.00
160		Thr		0.00
161		Tyr		0.00
162		Leu		0.00
163		Gly		0.00
164		Lys		0.00
165		Ala		0.00
166		Gly		0.00
167		Tyr		0.00
168		Val		0.00
169		Gly		0.00
170		Leu		0.00
171		Thr		0.00
172		Arg		0.00
173		Gln		0.00
174		Ala		0.00
175		Asp		0.00
176		Ala		0.00
177		Ala		0.00
178		Asn		0.00
179		Asn		0.00
180		Phe		0.00
181		His		0.00
182		Asp		0.01
183		Asn		0.02
184		Asp		0.06
185		Ala		0.11
186		Glu		0.19
187		Cys		0.23
188		Arg		0.23
189		Leu		0.22
190		Ala		0.23
191		Ser		0.18
192		Gly		0.22
193		His		0.27
194		Asn		0.29
195		Thr		0.30
196		Asn		0.40
197		Gly		0.45
198		Leu		0.66
199		Gly		0.81
200		Lys		0.84
201		Ser		0.78
202		Gly		0.78
203		Gln		0.66
204		Leu		0.55
205		Ser		0.51
206		Ala		0.52
207		Ala		0.45
208		Val		0.35
209		Thr		0.30
210		Met		0.31
211		Ala		0.27
212		Ala		0.21
213		Gly		0.17
214		Tyr		0.14
215		Val		0.09
216		Thr		0.07
217		Val		0.09
218		Ala		0.09
219		Asn		0.07
220		Ser		0.05
221		Gln		0.03
222		Thr		0.00
223		Ala		0.00
224		Val		0.00
225		Thr		0.00
226		Val		0.00
227		Gln		0.00
228		Ala		0.00
229		Leu		0.00
230		Asp		0.00
231		Ala		0.00
232		Leu		0.00
233		Gln		0.00
234		Glu		0.02
235		Ala		0.07
236		Ser		0.08
237		Gly		0.11
238		Ala		0.13
239		Ala		0.14
240		His		0.14
241		Gln		0.14
242		Pro		0.11
243		Trp		0.12
244		Ile		0.10
245		Asp		0.05
246		Ala		0.04
247		Trp		0.05
248		Lys		0.03
249		Ala		0.02
250		Lys		0.02
251		Lys		0.01
252		Ala		0.00
253		Leu		0.00
254		Thr		0.00
255		Gly		0.00
256		Ala		0.00
257		Glu		0.00
258		Thr		0.00
259		Ala		0.00
260		Glu		0.00
261		Phe		0.00
262		Arg		0.00
263		Asn		0.00
264		Glu		0.00
265		Thr		0.00
266		Ala		0.00
267		Gly		0.00
268		Ile		0.00
269		Ala		0.00
270		Gly		0.01
271		Lys		0.05
272		Thr		0.06
273		Gly		0.07
274		Val		0.11
275		Thr		0.17
276		Lys		0.17
277		Leu		0.20
278		Val		0.33
279		Glu		0.42
280		Glu		0.42
281		Ala		0.43
282		Leu		0.47
283		Leu		0.36
284		Lys		0.26
285		Lys		0.20
286		Lys		0.16
287		Asp		0.07
288		Ser		0.05
289		Glu		0.00
290		Ala		0.00
291		Ser		0.00
292		Glu		0.00
293		Ile		0.00
294		Gln		0.00
295		Thr		0.01
296		Glu		0.00
297		Leu		0.01
298		Lys		0.02
299		Lys		0.01
300		Tyr		0.01
301		Phe		0.01
302		Ser		0.01
303		Gly		0.00
304		His		0.00
305		Glu		0.00
306		Asn		0.00
307		Glu		0.00
308		Gln		0.00
309		Trp		0.00
310		Thr		0.00
311		Ala		0.00
312		Ile		0.00
313		Glu		0.00
314		Lys		0.00
315		Leu		0.00
316		Ile		0.00
317		Ser		0.00
318		Glu		0.00
319		Gln		0.00
320		Pro		0.03
321		Val		0.05
322		Ala		0.13
323		Gln		0.19
324		Asn		0.20
325		Leu		0.20
326		Val		0.18
327		Gly		0.10
328		Asp		0.04
329		Asn		0.02
330		Gln		0.01
331		Pro		0.00
332		Thr		0.00
333		Lys		0.00
334		Leu		0.00
335		Gly		0.00
336		Glu		0.01
337		Leu		0.06
338		Glu		0.14
339		Gly		0.29
340		Asn		0.35
341		Ala		0.38
342		Lys		0.43
343		Leu		0.48
344		Thr		0.38
345		Thr		0.38
346		Ile		0.54
347		Leu		0.56
348		Ala		0.49
349		Tyr		0.61
350		Tyr		0.77
351		Arg		0.68
352		Met		0.68
353		Glu		0.83
354		Thr		0.83
355		Ala		0.71
356		Gly		0.83
357		Lys		0.92
358		Phe		0.81
359		Glu		0.81
360		Val		0.91
361		Leu		0.00
362		Thr		0.00

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